View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8397_high_1 (Length: 468)

Name: NF8397_high_1
Description: NF8397
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8397_high_1
NF8397_high_1
[»] chr2 (46 HSPs)
chr2 (226-460)||(34455649-34455884)
chr2 (18-234)||(34456057-34456272)
chr2 (182-316)||(8540141-8540275)
chr2 (206-317)||(37038710-37038821)
chr2 (183-317)||(33055992-33056126)
chr2 (183-317)||(19164458-19164589)
chr2 (187-317)||(7872700-7872828)
chr2 (206-317)||(10195776-10195887)
chr2 (185-317)||(11188169-11188301)
chr2 (213-316)||(4658179-4658282)
chr2 (183-286)||(15083086-15083185)
chr2 (183-317)||(40608524-40608657)
chr2 (232-317)||(27964191-27964276)
chr2 (206-283)||(44712174-44712251)
chr2 (205-288)||(9391532-9391616)
chr2 (206-291)||(29412111-29412196)
chr2 (329-400)||(14636420-14636491)
chr2 (213-317)||(11132652-11132754)
chr2 (254-317)||(18719421-18719484)
chr2 (206-317)||(36685683-36685792)
chr2 (263-315)||(8774156-8774208)
chr2 (263-315)||(8789427-8789479)
chr2 (250-314)||(27726404-27726468)
chr2 (213-296)||(14833707-14833790)
chr2 (263-317)||(19636610-19636664)
chr2 (263-317)||(19835203-19835257)
chr2 (263-317)||(29396677-29396731)
chr2 (225-318)||(18579267-18579355)
chr2 (263-316)||(29808916-29808969)
chr2 (263-316)||(30855208-30855261)
chr2 (213-273)||(4469591-4469650)
chr2 (261-317)||(43971590-43971646)
chr2 (210-277)||(22620289-22620356)
chr2 (100-151)||(42410109-42410160)
chr2 (263-317)||(441228-441282)
chr2 (263-317)||(1423293-1423347)
chr2 (263-317)||(4288708-4288762)
chr2 (263-317)||(12342195-12342249)
chr2 (263-317)||(12393916-12393970)
chr2 (263-317)||(32228008-32228062)
chr2 (263-317)||(38926708-38926762)
chr2 (263-317)||(45081897-45081951)
chr2 (263-316)||(42743131-42743184)
chr2 (179-235)||(1198663-1198719)
chr2 (215-295)||(14286044-14286123)
chr2 (189-277)||(45423749-45423837)
[»] chr5 (36 HSPs)
chr5 (179-317)||(34534460-34534598)
chr5 (206-317)||(11977689-11977800)
chr5 (187-316)||(13974376-13974505)
chr5 (179-317)||(38362053-38362189)
chr5 (187-317)||(15166934-15167063)
chr5 (188-289)||(38370001-38370102)
chr5 (206-317)||(36164988-36165097)
chr5 (206-317)||(843119-843230)
chr5 (183-317)||(1309276-1309410)
chr5 (206-317)||(7736475-7736587)
chr5 (213-317)||(14161848-14161952)
chr5 (183-315)||(21634214-21634346)
chr5 (183-315)||(21642461-21642593)
chr5 (178-316)||(4911022-4911165)
chr5 (213-315)||(27797881-27797981)
chr5 (188-317)||(28591547-28591678)
chr5 (206-291)||(34381741-34381822)
chr5 (263-316)||(8336404-8336457)
chr5 (214-315)||(41645339-41645440)
chr5 (214-277)||(27557769-27557832)
chr5 (263-317)||(2729783-2729837)
chr5 (263-317)||(34446024-34446078)
chr5 (263-317)||(42661937-42661991)
chr5 (263-317)||(42978070-42978124)
chr5 (220-277)||(11195216-11195273)
chr5 (263-316)||(29807311-29807364)
chr5 (263-316)||(39335200-39335253)
chr5 (250-317)||(7721196-7721263)
chr5 (262-317)||(14005994-14006049)
chr5 (259-317)||(7748891-7748949)
chr5 (215-277)||(10344892-10344954)
chr5 (215-277)||(32158673-32158735)
chr5 (263-317)||(39730048-39730102)
chr5 (263-316)||(13761823-13761876)
chr5 (263-316)||(39504828-39504881)
chr5 (215-295)||(43584336-43584416)
[»] chr1 (44 HSPs)
chr1 (183-317)||(29567997-29568131)
chr1 (179-317)||(8894927-8895065)
chr1 (185-315)||(26594987-26595117)
chr1 (179-316)||(18794454-18794591)
chr1 (213-317)||(8989585-8989689)
chr1 (213-317)||(25560818-25560922)
chr1 (213-316)||(28538307-28538410)
chr1 (219-317)||(31699241-31699339)
chr1 (185-296)||(5101-5211)
chr1 (242-316)||(7191181-7191255)
chr1 (189-310)||(44556991-44557112)
chr1 (214-289)||(16757145-16757220)
chr1 (242-317)||(27209090-27209165)
chr1 (213-286)||(51244781-51244854)
chr1 (185-295)||(14373341-14373451)
chr1 (237-295)||(33694392-33694450)
chr1 (206-315)||(5225768-5225873)
chr1 (247-291)||(28562972-28563016)
chr1 (263-317)||(15823136-15823190)
chr1 (263-317)||(49468706-49468760)
chr1 (263-317)||(52125131-52125185)
chr1 (185-259)||(52707001-52707075)
chr1 (264-317)||(46286814-46286867)
chr1 (215-295)||(34032038-34032118)
chr1 (215-295)||(50249423-50249503)
chr1 (206-280)||(14607543-14607615)
chr1 (263-317)||(25151911-25151966)
chr1 (206-277)||(39125734-39125805)
chr1 (261-316)||(49900750-49900805)
chr1 (179-280)||(2671053-2671155)
chr1 (263-317)||(5463677-5463731)
chr1 (242-316)||(9092694-9092768)
chr1 (215-277)||(30293467-30293529)
chr1 (263-317)||(32806933-32806987)
chr1 (263-317)||(38530834-38530888)
chr1 (263-317)||(48009112-48009166)
chr1 (263-316)||(1740635-1740688)
chr1 (178-271)||(11799608-11799701)
chr1 (263-316)||(31798693-31798746)
chr1 (263-316)||(44108704-44108757)
chr1 (263-316)||(50094333-50094386)
chr1 (213-314)||(2610782-2610879)
chr1 (263-315)||(49426414-49426466)
chr1 (210-277)||(52023926-52023993)
[»] chr6 (26 HSPs)
chr6 (188-317)||(13011270-13011399)
chr6 (179-316)||(12459232-12459369)
chr6 (213-316)||(17552194-17552297)
chr6 (206-317)||(20226161-20226272)
chr6 (206-317)||(22120145-22120256)
chr6 (206-316)||(13503784-13503893)
chr6 (208-317)||(1502695-1502804)
chr6 (188-317)||(3988667-3988795)
chr6 (218-317)||(8957869-8957968)
chr6 (218-317)||(8961389-8961488)
chr6 (244-317)||(9940749-9940822)
chr6 (206-315)||(21271343-21271452)
chr6 (185-296)||(32193932-32194042)
chr6 (206-315)||(17828386-17828495)
chr6 (213-317)||(18737035-18737139)
chr6 (218-309)||(12588634-12588725)
chr6 (206-317)||(32619765-32619876)
chr6 (226-316)||(577164-577254)
chr6 (206-317)||(3847753-3847864)
chr6 (263-317)||(234136-234190)
chr6 (243-289)||(12322861-12322907)
chr6 (263-317)||(31443442-31443496)
chr6 (215-295)||(4850455-4850535)
chr6 (185-277)||(29400076-29400168)
chr6 (206-317)||(31233562-31233674)
chr6 (263-316)||(19675081-19675134)
[»] chr3 (36 HSPs)
chr3 (213-318)||(38141050-38141155)
chr3 (206-317)||(9189372-9189484)
chr3 (206-317)||(8817242-8817353)
chr3 (216-317)||(30315411-30315512)
chr3 (224-296)||(30680779-30680850)
chr3 (186-296)||(47823336-47823444)
chr3 (206-317)||(48903387-48903498)
chr3 (243-317)||(19373687-19373761)
chr3 (185-314)||(36844659-36844788)
chr3 (189-315)||(7230815-7230941)
chr3 (185-282)||(50646058-50646155)
chr3 (246-316)||(40717648-40717717)
chr3 (188-277)||(21324357-21324446)
chr3 (213-314)||(42072089-42072190)
chr3 (184-267)||(22857207-22857290)
chr3 (214-289)||(40487957-40488032)
chr3 (318-398)||(8878794-8878876)
chr3 (263-317)||(13756867-13756921)
chr3 (243-317)||(30934784-30934858)
chr3 (263-317)||(39359022-39359076)
chr3 (263-317)||(44676323-44676377)
chr3 (263-317)||(45213716-45213770)
chr3 (263-317)||(51398112-51398166)
chr3 (263-316)||(2458111-2458164)
chr3 (250-315)||(27067710-27067774)
chr3 (263-316)||(41287490-41287543)
chr3 (224-295)||(19115499-19115570)
chr3 (263-317)||(23525310-23525364)
chr3 (263-317)||(38016476-38016530)
chr3 (223-291)||(4392610-4392676)
chr3 (263-316)||(41850485-41850537)
chr3 (213-277)||(44064410-44064474)
chr3 (193-295)||(45460779-45460883)
chr3 (263-316)||(45566902-45566955)
chr3 (263-315)||(36460909-36460961)
chr3 (205-249)||(50033184-50033228)
[»] chr7 (42 HSPs)
chr7 (188-316)||(28289317-28289445)
chr7 (205-316)||(34012559-34012670)
chr7 (183-317)||(47461291-47461424)
chr7 (183-316)||(6563334-6563467)
chr7 (207-315)||(40753370-40753477)
chr7 (206-315)||(24780257-24780366)
chr7 (206-316)||(48843655-48843767)
chr7 (183-317)||(25055883-25056015)
chr7 (231-317)||(21819384-21819470)
chr7 (226-316)||(40339561-40339651)
chr7 (205-277)||(4268794-4268866)
chr7 (186-277)||(4268873-4268964)
chr7 (206-316)||(45499762-45499873)
chr7 (224-314)||(19303351-19303441)
chr7 (248-316)||(33939714-33939782)
chr7 (206-317)||(47187753-47187864)
chr7 (187-288)||(25086816-25086918)
chr7 (244-317)||(21752088-21752161)
chr7 (185-270)||(30312683-30312768)
chr7 (225-317)||(29636184-29636276)
chr7 (185-294)||(42286022-42286131)
chr7 (237-317)||(1031256-1031336)
chr7 (185-289)||(10476265-10476373)
chr7 (263-317)||(1742093-1742147)
chr7 (263-317)||(10599465-10599519)
chr7 (263-317)||(22298098-22298152)
chr7 (263-317)||(23935523-23935577)
chr7 (263-317)||(24680230-24680284)
chr7 (237-317)||(7335381-7335462)
chr7 (263-316)||(13405122-13405175)
chr7 (215-295)||(12983102-12983182)
chr7 (215-295)||(18292448-18292528)
chr7 (214-317)||(19104948-19105051)
chr7 (215-277)||(6747357-6747419)
chr7 (215-277)||(12977644-12977706)
chr7 (263-317)||(35777921-35777975)
chr7 (206-316)||(37490890-37490999)
chr7 (263-317)||(37815826-37815880)
chr7 (215-295)||(37502432-37502512)
chr7 (263-296)||(41137851-41137884)
chr7 (229-317)||(8293031-8293118)
chr7 (263-315)||(23155457-23155509)
[»] chr8 (33 HSPs)
chr8 (213-316)||(15750277-15750380)
chr8 (206-317)||(29312133-29312242)
chr8 (213-317)||(40399825-40399929)
chr8 (206-320)||(9812271-9812385)
chr8 (206-316)||(15227672-15227782)
chr8 (186-316)||(5295327-5295456)
chr8 (185-317)||(13367870-13368000)
chr8 (217-317)||(14234167-14234267)
chr8 (213-316)||(2375794-2375897)
chr8 (206-317)||(43969993-43970103)
chr8 (188-317)||(6374514-6374641)
chr8 (213-315)||(34796629-34796731)
chr8 (181-317)||(41679413-41679546)
chr8 (213-317)||(42179196-42179300)
chr8 (206-277)||(6115945-6116016)
chr8 (225-317)||(13496339-13496431)
chr8 (213-317)||(34156636-34156740)
chr8 (245-317)||(45358874-45358946)
chr8 (207-317)||(31233886-31233991)
chr8 (263-316)||(17921060-17921113)
chr8 (247-314)||(514981-515048)
chr8 (263-317)||(29025746-29025800)
chr8 (263-317)||(39698663-39698717)
chr8 (263-317)||(40228676-40228730)
chr8 (263-315)||(4760556-4760608)
chr8 (215-295)||(15160406-15160486)
chr8 (263-317)||(7839560-7839614)
chr8 (263-317)||(9880498-9880552)
chr8 (263-317)||(36669791-36669845)
chr8 (263-317)||(43448818-43448872)
chr8 (215-295)||(396174-396254)
chr8 (215-295)||(39765820-39765900)
chr8 (265-317)||(44713636-44713688)
[»] scaffold0565 (1 HSPs)
scaffold0565 (213-317)||(9902-10006)
[»] chr4 (45 HSPs)
chr4 (213-317)||(30261360-30261464)
chr4 (179-289)||(10573071-10573182)
chr4 (207-289)||(47458332-47458414)
chr4 (185-317)||(19451128-19451260)
chr4 (206-289)||(620120-620203)
chr4 (185-316)||(47817841-47817972)
chr4 (187-317)||(6991188-6991318)
chr4 (189-317)||(41496306-41496434)
chr4 (183-316)||(44061096-44061229)
chr4 (185-316)||(34413470-34413601)
chr4 (183-277)||(38510177-38510271)
chr4 (185-317)||(52162205-52162337)
chr4 (244-317)||(46392045-46392118)
chr4 (206-286)||(25123567-25123647)
chr4 (263-317)||(41920310-41920364)
chr4 (206-311)||(44650995-44651100)
chr4 (213-277)||(11364367-11364431)
chr4 (245-316)||(8971145-8971216)
chr4 (263-314)||(40345348-40345399)
chr4 (206-289)||(44868197-44868279)
chr4 (263-317)||(1819664-1819718)
chr4 (215-277)||(7905960-7906022)
chr4 (263-317)||(19878750-19878804)
chr4 (263-317)||(44571866-44571920)
chr4 (263-317)||(45043589-45043643)
chr4 (263-317)||(52957791-52957845)
chr4 (263-316)||(24940983-24941036)
chr4 (215-280)||(28308854-28308919)
chr4 (263-315)||(29370707-29370759)
chr4 (193-317)||(50203175-50203299)
chr4 (263-317)||(37654511-37654566)
chr4 (224-295)||(51733467-51733538)
chr4 (263-317)||(2728399-2728453)
chr4 (263-317)||(20448141-20448195)
chr4 (258-316)||(30780016-30780074)
chr4 (263-317)||(42605674-42605728)
chr4 (242-316)||(45839740-45839814)
chr4 (263-317)||(49089565-49089619)
chr4 (263-317)||(52253950-52254004)
chr4 (263-317)||(52848055-52848109)
chr4 (227-285)||(56460219-56460277)
chr4 (223-291)||(18052649-18052715)
chr4 (232-277)||(33034188-33034233)
chr4 (263-316)||(50623187-50623240)
chr4 (215-295)||(4505449-4505529)
[»] scaffold0983 (1 HSPs)
scaffold0983 (206-316)||(628-737)
[»] scaffold0136 (1 HSPs)
scaffold0136 (206-316)||(9647-9754)
[»] scaffold0026 (1 HSPs)
scaffold0026 (185-316)||(4243-4374)
[»] scaffold0300 (1 HSPs)
scaffold0300 (185-310)||(4673-4796)
[»] scaffold0012 (1 HSPs)
scaffold0012 (317-390)||(206247-206320)
[»] scaffold0182 (1 HSPs)
scaffold0182 (244-317)||(18233-18306)
[»] scaffold0294 (1 HSPs)
scaffold0294 (263-317)||(3501-3555)
[»] scaffold0502 (1 HSPs)
scaffold0502 (241-289)||(547-595)


Alignment Details
Target: chr2 (Bit Score: 176; Significance: 1e-94; HSPs: 46)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 226 - 460
Target Start/End: Complemental strand, 34455884 - 34455649
Alignment:
Q  226 attaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattctaatcaactactggtttattgtttattaaagaaaaaattgttgtag 325  Q
    ||||||||||||||||||||||||||| ||||||||| |||||||||||||| ||||||||||||||||||| | |||||||||||||||||| ||||||    
T  34455884 attaaaaaattcattgattaaaagaaagagagatgttcttttaccaaattatcctaatcaactactggtttaatttttattaaagaaaaaattattgtag 34455785  T
Q  326 cggatgaccggagaatgattaacctgcaaaataacaaaccgtgaaacaaacataagg----cgtgactacatcactggagtactacggaagtatccgtag 421  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    |||||||||||||||||||   |||||||||||||||||    
T  34455784 aggatgaccggagaatgattaacctgcaaaataacaaaccgtgaaacaaacataaggcgtgcgtgactacatcactggag---tacggaagtatccgtag 34455688  T
Q  422 gattgcacaaatccccccaaaatacaacaggttcttctc 460  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  34455687 gattgcacaaatccccccaaaatataacaggttcttctc 34455649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 163; E-Value: 7e-87
Query Start/End: Original strand, 18 - 234
Target Start/End: Complemental strand, 34456272 - 34456057
Alignment:
Q  18 aaactaagcactatggcctcacgagaacgtacatgcatgctaaactatattctcattaatttgtgacctctctctacggcggcacacaaacacttggtag 117  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| |||||||  |||||||||||||||||||||||||    
T  34456272 aaactaagcactatggcctcacgagaatgtacatgcatgctaaactatattgtcattaatttgtgtcctctct--acggcggcacacaaacacttggtag 34456175  T
Q  118 gaa-cacttaccgtccccactaactcttgttctttctcgttctcaaacctctaacctcatccacttcatccgttttaaaatgaaccttatttaagatttt 216  Q
    ||| ||||||| ||||||||||||||||||||||| |||||| |||||||||||||||||||||| ||||||||||||||||||| || |||||||||||    
T  34456174 gaaacacttactgtccccactaactcttgttctttttcgttcccaaacctctaacctcatccactccatccgttttaaaatgaactttgtttaagatttt 34456075  T
Q  217 tacacatatattaaaaaa 234  Q
    ||||||||||||||||||    
T  34456074 tacacatatattaaaaaa 34456057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 182 - 316
Target Start/End: Complemental strand, 8540275 - 8540141
Alignment:
Q  182 tcatccgttttaaaatgaaccttatttaagatttttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattcta 281  Q
    |||||||||||||||||||  |  ||||||||||||||||| ||||||| |||| |||| ||||||||||||||||||||||||||| |||||||| |||    
T  8540275 tcatccgttttaaaatgaatatagtttaagatttttacacacatattaagaaatgcattaattaaaagaaaaagagatgttattttatcaaattatccta 8540176  T
Q  282 atcaactactggtttattgtttattaaagaaaaaa 316  Q
    |||||||| | |||| || || |||||||||||||    
T  8540175 atcaactattagtttgtttttcattaaagaaaaaa 8540141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 206 - 317
Target Start/End: Original strand, 37038710 - 37038821
Alignment:
Q  206 tttaagatttttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattctaatcaactactggtttattgtttat 305  Q
    ||||||||||||||||| ||||||| |||| |||| ||||||||||| |||||||||||||||||||||||| ||||||||||| |||||| || || ||    
T  37038710 tttaagatttttacacacatattaagaaatacattaattaaaagaaagagagatgttattttaccaaattatcctaatcaactattggtttgtttttcat 37038809  T
Q  306 taaagaaaaaat 317  Q
    ||||||||||||    
T  37038810 taaagaaaaaat 37038821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 183 - 317
Target Start/End: Complemental strand, 33056126 - 33055992
Alignment:
Q  183 catccgttttaaaatgaaccttatttaagatttttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattctaa 282  Q
    ||||||||||||||||||  |  ||||||| ||||||||| ||||||||||||   || ||||||||||| ||||||||||||||||||||||||  |||    
T  33056126 catccgttttaaaatgaatgtcgtttaagaattttacacacatattaaaaaatgtcttaattaaaagaaagagagatgttattttaccaaattatcataa 33056027  T
Q  283 tcaactactggtttattgtttattaaagaaaaaat 317  Q
    ||||||| |||||| || || ||||||||||||||    
T  33056026 tcaactattggtttgtttttcattaaagaaaaaat 33055992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 183 - 317
Target Start/End: Complemental strand, 19164589 - 19164458
Alignment:
Q  183 catccgttttaaaatgaaccttatttaagatttttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattctaa 282  Q
    ||||||||| |||| |||  || |||||| |||||||||||||||||| ||||| ||| ||||||||||| ||| |||||||||||||||||||   |||    
T  19164589 catccgtttcaaaacgaatgttgtttaaggtttttacacatatattaagaaatttattaattaaaagaaagagatatgttattttaccaaatta---taa 19164493  T
Q  283 tcaactactggtttattgtttattaaagaaaaaat 317  Q
    ||||||| |||||| || || ||||||||||||||    
T  19164492 tcaactattggtttgttattcattaaagaaaaaat 19164458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 187 - 317
Target Start/End: Original strand, 7872700 - 7872828
Alignment:
Q  187 cgttttaaaatgaaccttatttaagatttttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattctaatcaa 286  Q
    ||||||||||||||  || |||| | |||||||||| ||||||||||||||||| ||||||||  |||||||| |||||||||||||||||||| ||| |    
T  7872700 cgttttaaaatgaatgttgtttatggtttttacacacatattaaaaaattcattaattaaaag--aaagagatattattttaccaaattattctgatcga 7872797  T
Q  287 ctactggtttattgtttattaaagaaaaaat 317  Q
    ||| || ||| || || ||||||||||||||    
T  7872798 ctattgatttgtttttcattaaagaaaaaat 7872828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 206 - 317
Target Start/End: Complemental strand, 10195887 - 10195776
Alignment:
Q  206 tttaagatttttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattctaatcaactactggtttattgtttat 305  Q
    |||||| |||||||| || ||||||  |||  ||| ||||||||||| |||||||||||||||||||||||| ||||||||||| || ||| || |||||    
T  10195887 tttaaggtttttacatatttattaaggaatgtattaattaaaagaaagagagatgttattttaccaaattatcctaatcaactattgttttgttttttat 10195788  T
Q  306 taaagaaaaaat 317  Q
    ||||||||||||    
T  10195787 taaagaaaaaat 10195776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 185 - 317
Target Start/End: Original strand, 11188169 - 11188301
Alignment:
Q  185 tccgttttaaaatgaaccttatttaagatttttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattctaatc 284  Q
    ||||||| ||||||||  |  |||||| || ||||||| ||||||| |||| |||| || |||||||| ||||||||||||||||||| |||| ||||||    
T  11188169 tccgtttcaaaatgaatgtcgtttaaggttcttacacacatattaataaatgcattaatcaaaagaaagagagatgttattttaccaagttatcctaatc 11188268  T
Q  285 aactactggtttattgtttattaaagaaaaaat 317  Q
    ||||| ||| || || || ||||||||||||||    
T  11188269 aactattgggttgtttttcattaaagaaaaaat 11188301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 213 - 316
Target Start/End: Original strand, 4658179 - 4658282
Alignment:
Q  213 tttttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattctaatcaactactggtttattgtttattaaagaa 312  Q
    |||||||||| ||||||||||||  ||| ||||||| ||| | |||||||||||||||||||| | ||||||||||| |||||| || || |||||||||    
T  4658179 tttttacacacatattaaaaaatgtattaattaaaataaagaaagatgttattttaccaaattgtcctaatcaactattggtttgtttttcattaaagaa 4658278  T
Q  313 aaaa 316  Q
    ||||    
T  4658279 aaaa 4658282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 183 - 286
Target Start/End: Original strand, 15083086 - 15083185
Alignment:
Q  183 catccgttttaaaatgaaccttatttaagatttttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattctaa 282  Q
    ||||||||||||||||||  ||||||||  |||||||||||||||||| |||| |||| ||||||||||    ||||||||||||||||||||||  |||    
T  15083086 catccgttttaaaatgaatgttatttaaagtttttacacatatattaataaatgcattaattaaaagaa----agatgttattttaccaaattatcataa 15083181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 183 - 317
Target Start/End: Original strand, 40608524 - 40608657
Alignment:
Q  183 catccgttttaaaatgaaccttatttaagatttttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattctaa 282  Q
    |||||||| |||||||||  || ||||||||||||| ||||||||||| |||  |||| ||||||||||||| |  | ||||||||||||||||| ||||    
T  40608524 catccgttgtaaaatgaatgttgtttaagatttttatacatatattaataaacacattaattaaaagaaaaa-atgtattattttaccaaattatcctaa 40608622  T
Q  283 tcaactactggtttattgtttattaaagaaaaaat 317  Q
    |||||||   |||| || || ||||||||||||||    
T  40608623 tcaactataagtttgtttttcattaaagaaaaaat 40608657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 232 - 317
Target Start/End: Original strand, 27964191 - 27964276
Alignment:
Q  232 aaattcattgattaaaagaaaaagagatgttattttaccaaattattctaatcaactactggtttattgtttattaaagaaaaaat 317  Q
    |||| |||| ||||||||||| | ||||||||||||||||||||||| |||||||||| |||||| || || ||||||||||||||    
T  27964191 aaatgcattaattaaaagaaagaaagatgttattttaccaaattattttaatcaactattggtttgtttttcattaaagaaaaaat 27964276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 206 - 283
Target Start/End: Original strand, 44712174 - 44712251
Alignment:
Q  206 tttaagatttttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattctaat 283  Q
    ||||||||||||||||| |||||||||||| |||| ||||||||||| | |||||| ||||||||||||||| |||||    
T  44712174 tttaagatttttacacacatattaaaaaatacattaattaaaagaaagaaagatgtaattttaccaaattatcctaat 44712251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 205 - 288
Target Start/End: Original strand, 9391532 - 9391616
Alignment:
Q  205 atttaagatttttacacatatattaaaaaattcattgattaaaagaaaaa-gagatgttattttaccaaattattctaatcaact 288  Q
    |||||||||||||||||| ||||||||||||  ||| ||||||| ||||| || |||||||||||||||||||| ||||||||||    
T  9391532 atttaagatttttacacacatattaaaaaatgtattaattaaaaaaaaaaagatatgttattttaccaaattatcctaatcaact 9391616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 206 - 291
Target Start/End: Complemental strand, 29412196 - 29412111
Alignment:
Q  206 tttaagatttttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattctaatcaactact 291  Q
    |||||| ||||||||| |||||||| |||| |||| |||||||| || ||| | |||||||||||||||||| |||||||||||||    
T  29412196 tttaaggtttttacacgtatattaagaaatgcattaattaaaaggaagagataagttattttaccaaattatcctaatcaactact 29412111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 329 - 400
Target Start/End: Original strand, 14636420 - 14636491
Alignment:
Q  329 atgaccggagaatgattaacctgcaaaataacaaaccgtgaaacaaacataaggcgtgactacatcactgga 400  Q
    ||||||| | ||||||||||||||||||||||||||||||||| |||  | |||||||||||| ||||||||    
T  14636420 atgaccgaaaaatgattaacctgcaaaataacaaaccgtgaaataaatttgaggcgtgactacgtcactgga 14636491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 213 - 317
Target Start/End: Complemental strand, 11132754 - 11132652
Alignment:
Q  213 tttttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattctaatcaactactggtttattgtttattaaagaa 312  Q
    ||||||| || ||||||| |||| |||| ||||||||||||||| ||  ||| ||||||||||||| |||||||||| | |||| || || |||||||||    
T  11132754 tttttacgcacatattaagaaatgcattaattaaaagaaaaagatat--tatattaccaaattattataatcaactatttgtttgtttttcattaaagaa 11132657  T
Q  313 aaaat 317  Q
    |||||    
T  11132656 aaaat 11132652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 254 - 317
Target Start/End: Original strand, 18719421 - 18719484
Alignment:
Q  254 agagatgttattttaccaaattattctaatcaactactggtttattgtttattaaagaaaaaat 317  Q
    |||| ||||||||||||||||||| ||||||||||| |||||| || || ||||||||||||||    
T  18719421 agaggtgttattttaccaaattatcctaatcaactattggtttgtttttcattaaagaaaaaat 18719484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 206 - 317
Target Start/End: Original strand, 36685683 - 36685792
Alignment:
Q  206 tttaagatttttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattctaatcaactactggtttattgtttat 305  Q
    |||||| ||| |||||| ||||||| ||||  ||| ||||||| ||||||| |||||||||||||||||||| |||||||| || |||||| || || ||    
T  36685683 tttaaggtttatacacacatattaataaatatattaattaaaa-aaaaagatatgttattttaccaaattatcctaatcaattattggtttgtt-ttcat 36685780  T
Q  306 taaagaaaaaat 317  Q
     |||||||||||    
T  36685781 caaagaaaaaat 36685792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 263 - 315
Target Start/End: Complemental strand, 8774208 - 8774156
Alignment:
Q  263 attttaccaaattattctaatcaactactggtttattgtttattaaagaaaaa 315  Q
    ||||||||||||||| ||||||||||| ||||||||| || ||||||||||||    
T  8774208 attttaccaaattatcctaatcaactattggtttatttttcattaaagaaaaa 8774156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 263 - 315
Target Start/End: Original strand, 8789427 - 8789479
Alignment:
Q  263 attttaccaaattattctaatcaactactggtttattgtttattaaagaaaaa 315  Q
    ||||||||||||||| ||||||||||| ||||||||| || ||||||||||||    
T  8789427 attttaccaaattatcctaatcaactattggtttatttttcattaaagaaaaa 8789479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 250 - 314
Target Start/End: Original strand, 27726404 - 27726468
Alignment:
Q  250 aaaaagagatgttattttaccaaattattctaatcaactactggtttattgtttattaaagaaaa 314  Q
    ||||| |||||||||||||||||||||| ||||||||||| |||||| || || |||||| ||||    
T  27726404 aaaaaaagatgttattttaccaaattatcctaatcaactattggtttgtttttcattaaaaaaaa 27726468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 213 - 296
Target Start/End: Original strand, 14833707 - 14833790
Alignment:
Q  213 tttttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattctaatcaactactggttt 296  Q
    |||||||| ||||||||| |||| |||  ||||||| ||| | | |||||||||||||||||||| | ||||||||| ||||||    
T  14833707 tttttacatatatattaagaaatgcatcaattaaaataaatataaatgttattttaccaaattatcccaatcaactattggttt 14833790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 263 - 317
Target Start/End: Complemental strand, 19636664 - 19636610
Alignment:
Q  263 attttaccaaattattctaatcaactactggtttattgtttattaaagaaaaaat 317  Q
    |||||| |||||||| ||||||||||| ||||||||| || ||||||||||||||    
T  19636664 attttatcaaattatcctaatcaactattggtttatttttcattaaagaaaaaat 19636610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 263 - 317
Target Start/End: Complemental strand, 19835257 - 19835203
Alignment:
Q  263 attttaccaaattattctaatcaactactggtttattgtttattaaagaaaaaat 317  Q
    |||||| |||||||| ||||||||||| ||||||||| || ||||||||||||||    
T  19835257 attttatcaaattatcctaatcaactattggtttatttttcattaaagaaaaaat 19835203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 263 - 317
Target Start/End: Original strand, 29396677 - 29396731
Alignment:
Q  263 attttaccaaattattctaatcaactactggtttattgtttattaaagaaaaaat 317  Q
    ||||||||||||||| ||||||||||| |||||| || || ||||||||||||||    
T  29396677 attttaccaaattatcctaatcaactattggtttgtttttcattaaagaaaaaat 29396731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 225 - 318
Target Start/End: Complemental strand, 18579355 - 18579267
Alignment:
Q  225 tattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattctaatcaactactggtttattgtttattaaagaaaaaatt 318  Q
    |||||| |||| |||| ||| |||||| |||||||||||||||||| ||||||     ||||||| |||||| || || |||||||||||||||    
T  18579355 tattaagaaatgcattaatttaaagaataagagatgttattttaccgaattat-----tcaactattggtttgtttttcattaaagaaaaaatt 18579267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 263 - 316
Target Start/End: Complemental strand, 29808969 - 29808916
Alignment:
Q  263 attttaccaaattattctaatcaactactggtttattgtttattaaagaaaaaa 316  Q
    ||||||||||||||| ||||||||||| |||||| || || |||||||||||||    
T  29808969 attttaccaaattatcctaatcaactattggtttgtttttcattaaagaaaaaa 29808916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 263 - 316
Target Start/End: Complemental strand, 30855261 - 30855208
Alignment:
Q  263 attttaccaaattattctaatcaactactggtttattgtttattaaagaaaaaa 316  Q
    ||||||||||||||| ||||||||||| |||||| || || |||||||||||||    
T  30855261 attttaccaaattatcctaatcaactattggtttgtttttcattaaagaaaaaa 30855208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 213 - 273
Target Start/End: Complemental strand, 4469650 - 4469591
Alignment:
Q  213 tttttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaa 273  Q
    |||||||||| |||| || |||| |||| ||||||||||| ||||||||||||||||||||    
T  4469650 tttttacacacatat-aagaaatgcattaattaaaagaaagagagatgttattttaccaaa 4469591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 261 - 317
Target Start/End: Complemental strand, 43971646 - 43971590
Alignment:
Q  261 ttattttaccaaattattctaatcaactactggtttattgtttattaaagaaaaaat 317  Q
    |||||||||| |||||| ||||||||||| |||||| || || ||||||||||||||    
T  43971646 ttattttaccgaattatcctaatcaactattggtttgtttttcattaaagaaaaaat 43971590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 210 - 277
Target Start/End: Original strand, 22620289 - 22620356
Alignment:
Q  210 agatttttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattat 277  Q
    |||| |||||||| |||||||||||| || ||||||||||||| |||   |||||||||| |||||||    
T  22620289 agatgtttacacacatattaaaaaatgcaatgattaaaagaaagagaatggttattttactaaattat 22620356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 100 - 151
Target Start/End: Complemental strand, 42410160 - 42410109
Alignment:
Q  100 cacacaaacacttggtaggaacacttaccgtccccactaactcttgttcttt 151  Q
    |||| |||||||||||| ||||||| || |||||||||||||| ||||||||    
T  42410160 cacataaacacttggtaagaacactcactgtccccactaactcgtgttcttt 42410109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 263 - 317
Target Start/End: Original strand, 441228 - 441282
Alignment:
Q  263 attttaccaaattattctaatcaactactggtttattgtttattaaagaaaaaat 317  Q
    ||||||||||||||| ||||||||| | |||||| || || ||||||||||||||    
T  441228 attttaccaaattatcctaatcaaccattggtttgtttttcattaaagaaaaaat 441282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 263 - 317
Target Start/End: Complemental strand, 1423347 - 1423293
Alignment:
Q  263 attttaccaaattattctaatcaactactggtttattgtttattaaagaaaaaat 317  Q
    ||||||||||||||| ||||||||||| |||||| ||  | ||||||||||||||    
T  1423347 attttaccaaattatcctaatcaactattggtttgtttctcattaaagaaaaaat 1423293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 263 - 317
Target Start/End: Original strand, 4288708 - 4288762
Alignment:
Q  263 attttaccaaattattctaatcaactactggtttattgtttattaaagaaaaaat 317  Q
    ||||||||||||||| ||||||||||| | |||| || || ||||||||||||||    
T  4288708 attttaccaaattatcctaatcaactattagtttgtttttcattaaagaaaaaat 4288762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 263 - 317
Target Start/End: Complemental strand, 12342249 - 12342195
Alignment:
Q  263 attttaccaaattattctaatcaactactggtttattgtttattaaagaaaaaat 317  Q
    ||||||||||||||| ||||||||||| || ||| || || ||||||||||||||    
T  12342249 attttaccaaattatcctaatcaactattgatttgtttttcattaaagaaaaaat 12342195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 263 - 317
Target Start/End: Original strand, 12393916 - 12393970
Alignment:
Q  263 attttaccaaattattctaatcaactactggtttattgtttattaaagaaaaaat 317  Q
    ||||||||||||||| ||||||||||| | |||| || || ||||||||||||||    
T  12393916 attttaccaaattatcctaatcaactattagtttgtttttcattaaagaaaaaat 12393970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 263 - 317
Target Start/End: Original strand, 32228008 - 32228062
Alignment:
Q  263 attttaccaaattattctaatcaactactggtttattgtttattaaagaaaaaat 317  Q
    ||||||||||||||| ||||||||||| ||| || || || ||||||||||||||    
T  32228008 attttaccaaattatcctaatcaactattgggttgtttttcattaaagaaaaaat 32228062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 263 - 317
Target Start/End: Complemental strand, 38926762 - 38926708
Alignment:
Q  263 attttaccaaattattctaatcaactactggtttattgtttattaaagaaaaaat 317  Q
    |||||||||||||||  |||||||||| |||||| || || ||||||||||||||    
T  38926762 attttaccaaattatcataatcaactattggtttgtttttcattaaagaaaaaat 38926708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 263 - 317
Target Start/End: Original strand, 45081897 - 45081951
Alignment:
Q  263 attttaccaaattattctaatcaactactggtttattgtttattaaagaaaaaat 317  Q
    ||||||||||||||| ||||||||||| || ||| || || ||||||||||||||    
T  45081897 attttaccaaattatcctaatcaactattgttttgtttttcattaaagaaaaaat 45081951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 263 - 316
Target Start/End: Complemental strand, 42743184 - 42743131
Alignment:
Q  263 attttaccaaattattctaatcaactactggtttattgtttattaaagaaaaaa 316  Q
    ||||||||||||||| |||||||| || || ||| || ||||||||||||||||    
T  42743184 attttaccaaattatcctaatcaattattgatttgttttttattaaagaaaaaa 42743131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 179 - 235
Target Start/End: Original strand, 1198663 - 1198719
Alignment:
Q  179 acttcatccgttttaaaatgaaccttatttaagatttttacacatatattaaaaaat 235  Q
    ||||| ||| ||||||||||||  || ||||||||||||||||||| ||||| ||||    
T  1198663 acttcctcctttttaaaatgaatattgtttaagatttttacacataaattaagaaat 1198719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 215 - 295
Target Start/End: Complemental strand, 14286123 - 14286044
Alignment:
Q  215 tttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattctaatcaactactggtt 295  Q
    |||||||| ||||||| |||| || ||||||||||||| || ||| |||||||| |||||||| || || ||||| |||||    
T  14286123 tttacacacatattaagaaatgcaatgattaaaagaaagag-gatattattttatcaaattatccttattaactattggtt 14286044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 189 - 277
Target Start/End: Complemental strand, 45423837 - 45423749
Alignment:
Q  189 ttttaaaatgaaccttatttaagatttttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattat 277  Q
    ||||||||||||  |  ||||| ||||||||||| ||||||| ||||  | ||||||||| ||| |||  | |||||||||||||||||    
T  45423837 ttttaaaatgaatgtcgtttaaaatttttacacacatattaagaaatgaaatgattaaaataaatagaattattattttaccaaattat 45423749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 75; Significance: 2e-34; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 179 - 317
Target Start/End: Complemental strand, 34534598 - 34534460
Alignment:
Q  179 acttcatccgttttaaaatgaaccttatttaagatttttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattatt 278  Q
    ||||||||||||| ||||||||  || ||| || |||||||||| |||||||||||| |||| ||||||||||| |||||| |||||||||||||||||     
T  34534598 acttcatccgtttcaaaatgaatgttgtttgaggtttttacacacatattaaaaaatgcattaattaaaagaaagagagatattattttaccaaattatc 34534499  T
Q  279 ctaatcaactactggtttattgtttattaaagaaaaaat 317  Q
    ||||||||||| |||||| || || ||||||||||||||    
T  34534498 ctaatcaactattggtttgtttttcattaaagaaaaaat 34534460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 206 - 317
Target Start/End: Complemental strand, 11977800 - 11977689
Alignment:
Q  206 tttaagatttttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattctaatcaactactggtttattgtttat 305  Q
    |||||| |||||||||| ||||||| |||| |||| ||||||||||| ||||||||| |||||||||||||| ||||||||||| |||||| ||||| ||    
T  11977800 tttaagctttttacacacatattaagaaatgcattaattaaaagaaagagagatgttgttttaccaaattatcctaatcaactattggtttgttgttcat 11977701  T
Q  306 taaagaaaaaat 317  Q
    ||||||||||||    
T  11977700 taaagaaaaaat 11977689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 187 - 316
Target Start/End: Complemental strand, 13974505 - 13974376
Alignment:
Q  187 cgttttaaaatgaaccttatttaagatttttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattctaatcaa 286  Q
    ||||||||||||||  |  ||||||||||||||||| ||||||| |||| |||| ||||||||||| |||| ||||||||||||||||||| ||||||||    
T  13974505 cgttttaaaatgaatgtcgtttaagatttttacacacatattaagaaatgcattaattaaaagaaagagaggtgttattttaccaaattatcctaatcaa 13974406  T
Q  287 ctactggtttattgtttattaaagaaaaaa 316  Q
    ||| | |||| || |  |||||||||||||    
T  13974405 ctatttgtttgttttccattaaagaaaaaa 13974376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 179 - 317
Target Start/End: Original strand, 38362053 - 38362189
Alignment:
Q  179 acttcatccgttttaaaatgaaccttatttaagatttttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattatt 278  Q
    ||||| |||||||||||| |||  ||||||||| |||||||||||||  || |||||  ||| ||||||||||| ||| |||||||||||| |||||||     
T  38362053 acttcctccgttttaaaacgaatgttatttaaggtttttacacatat--tataaaataaattaattaaaagaaagagaaatgttattttactaaattatc 38362150  T
Q  279 ctaatcaactactggtttattgtttattaaagaaaaaat 317  Q
    ||||| ||||| || |||||| |||||||||||||||||    
T  38362151 ctaattaactattgttttattttttattaaagaaaaaat 38362189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 187 - 317
Target Start/End: Original strand, 15166934 - 15167063
Alignment:
Q  187 cgttttaaaatgaaccttatttaagatttttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattctaatcaa 286  Q
    ||||||||||||||  |  ||||| ||||||| ||||||||||||||||  ||| |||||| |||| ||||| |||||||||||||||||| ||| ||||    
T  15166934 cgttttaaaatgaatgtcgtttaaaatttttatacatatattaaaaaatatattaattaaa-gaaatagagacgttattttaccaaattatcctagtcaa 15167032  T
Q  287 ctactggtttattgtttattaaagaaaaaat 317  Q
    ||| ||||| ||| || ||||||||||||||    
T  15167033 ctattggttaatttttcattaaagaaaaaat 15167063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 188 - 289
Target Start/End: Complemental strand, 38370102 - 38370001
Alignment:
Q  188 gttttaaaatgaaccttatttaagatttttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattctaatcaac 287  Q
    ||||||||||||   || |||||| |||||||||||||||||| |||| |||| ||||||| ||| ||| |||||||||||||||||||| |||||||||    
T  38370102 gttttaaaatgattgttgtttaaggtttttacacatatattaataaatgcattaattaaaataaagagatatgttattttaccaaattatcctaatcaac 38370003  T
Q  288 ta 289  Q
    ||    
T  38370002 ta 38370001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 206 - 317
Target Start/End: Complemental strand, 36165097 - 36164988
Alignment:
Q  206 tttaagatttttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattctaatcaactactggtttattgtttat 305  Q
    |||||| |||||||||||||  |||||||| |||| |||||||||||   | |||||||||||||||||||| ||||||||||| || ||| || |||||    
T  36165097 tttaagttttttacacatat--taaaaaatgcattaattaaaagaaaggtaaatgttattttaccaaattatcctaatcaactattgatttgttttttat 36165000  T
Q  306 taaagaaaaaat 317  Q
    ||||||||||||    
T  36164999 taaagaaaaaat 36164988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 206 - 317
Target Start/End: Complemental strand, 843230 - 843119
Alignment:
Q  206 tttaagatttttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattctaatcaactactggtttattgtttat 305  Q
    |||||||||| | |||| ||||||| |||| |||| ||||||||||  ||| |||||||||||||||||||| ||||||||||| |||||| ||  | ||    
T  843230 tttaagatttctccacaaatattaagaaatgcattaattaaaagaaggagatatgttattttaccaaattatcctaatcaactattggtttgtttctcat 843131  T
Q  306 taaagaaaaaat 317  Q
    ||||||||||||    
T  843130 taaagaaaaaat 843119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 183 - 317
Target Start/End: Original strand, 1309276 - 1309410
Alignment:
Q  183 catccgttttaaaatgaaccttatttaagatttttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattctaa 282  Q
    ||||||||| ||||||||  | ||||||| |||||||||| ||||||| |||| |||| ||||||||||| ||| ||||||||||| ||||||||  |||    
T  1309276 catccgtttcaaaatgaatgtcatttaaggtttttacacacatattaagaaatgcattaattaaaagaaatagatatgttattttatcaaattatcataa 1309375  T
Q  283 tcaactactggtttattgtttattaaagaaaaaat 317  Q
    ||||| | || ||| ||  | ||||||||||||||    
T  1309376 tcaacaattgatttgtttatcattaaagaaaaaat 1309410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 206 - 317
Target Start/End: Complemental strand, 7736587 - 7736475
Alignment:
Q  206 tttaagatttttacacatatattaaaaaatt-cattgattaaaagaaaaagagatgttattttaccaaattattctaatcaactactggtttattgttta 304  Q
    ||||||||||||||||| ||||||||||| | |||| ||||||| ||| ||| |||||||||||||| ||||| ||||||||||| | |||  || || |    
T  7736587 tttaagatttttacacacatattaaaaaaatgcattaattaaaataaagagatatgttattttaccatattatcctaatcaactattagttcgtttttca 7736488  T
Q  305 ttaaagaaaaaat 317  Q
    |||||||||||||    
T  7736487 ttaaagaaaaaat 7736475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 213 - 317
Target Start/End: Original strand, 14161848 - 14161952
Alignment:
Q  213 tttttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattctaatcaactactggtttattgtttattaaagaa 312  Q
    ||||| |||| ||||||| |||| |||| ||||||||||| |  |||||||||||| ||||||||  ||| |||||||||||||||| || |||||||||    
T  14161848 tttttgcacacatattaagaaatgcattaattaaaagaaagaaggatgttattttatcaaattatcataaacaactactggtttatttttcattaaagaa 14161947  T
Q  313 aaaat 317  Q
    |||||    
T  14161948 aaaat 14161952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 183 - 315
Target Start/End: Complemental strand, 21634346 - 21634214
Alignment:
Q  183 catccgttttaaaatgaaccttatttaagatttttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattctaa 282  Q
    |||| |||||||||||||  |  |||||  |||||||||| ||||||| |||| |||| ||||||| ||| |||||||||||||||||||| |||  |||    
T  21634346 catctgttttaaaatgaatgtcgtttaaagtttttacacacatattaagaaatgcattaattaaaataaagagagatgttattttaccaaagtatcataa 21634247  T
Q  283 tcaactactggtttattgtttattaaagaaaaa 315  Q
    |||| || |||||| || || ||||||||||||    
T  21634246 tcaattattggtttgtttttcattaaagaaaaa 21634214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 183 - 315
Target Start/End: Complemental strand, 21642593 - 21642461
Alignment:
Q  183 catccgttttaaaatgaaccttatttaagatttttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattctaa 282  Q
    |||| |||||||||||||  |  |||||  |||||||||| ||||||| |||| |||| ||||||| ||| |||||||||||||||||||| |||  |||    
T  21642593 catctgttttaaaatgaatgtcgtttaaagtttttacacacatattaagaaatgcattaattaaaataaagagagatgttattttaccaaagtatcataa 21642494  T
Q  283 tcaactactggtttattgtttattaaagaaaaa 315  Q
    |||| || |||||| || || ||||||||||||    
T  21642493 tcaattattggtttgtttttcattaaagaaaaa 21642461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 178 - 316
Target Start/End: Original strand, 4911022 - 4911165
Alignment:
Q  178 cacttcatccgttttaaaatgaaccttatttaagatttttacacatatattaaaaaattcattgattaaaagaaaaagagatg-----ttattttaccaa 272  Q
    |||| |||| |||| ||||||||  | ||||||| |||||||||| ||||||| |||| |||| ||||||||||| | | |||     ||||||||||||    
T  4911022 cactccatctgtttcaaaatgaatgtcatttaaggtttttacacacatattaagaaatacattaattaaaagaaagataaatgttattttattttaccaa 4911121  T
Q  273 attattctaatcaactactggtttattgtttattaaagaaaaaa 316  Q
    ||||| ||||||||||| |||||| || || |||||||||||||    
T  4911122 attatcctaatcaactattggtttgtttttcattaaagaaaaaa 4911165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 213 - 315
Target Start/End: Complemental strand, 27797981 - 27797881
Alignment:
Q  213 tttttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattctaatcaactactggtttattgtttattaaagaa 312  Q
    |||||||| | |||||||||||| |||| |||||||||||  || ||||||||||||||||||||  |||||||||| |||||| || || |||||||||    
T  27797981 tttttacatacatattaaaaaatacattaattaaaagaaa--gaaatgttattttaccaaattatcttaatcaactattggtttgtttttcattaaagaa 27797884  T
Q  313 aaa 315  Q
    |||    
T  27797883 aaa 27797881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 188 - 317
Target Start/End: Original strand, 28591547 - 28591678
Alignment:
Q  188 gttttaaaatgaaccttatttaagatttttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattc----taat 283  Q
    |||||||||||||  | ||| ||| |||||||||| ||||||| |||| |||| ||||||||  |||||||||||||||||||||||||| |    ||||    
T  28591547 gttttaaaatgaatgtcattaaagttttttacacacatattaataaatacattaattaaaag--aaagagatgttattttaccaaattatcctaattaat 28591644  T
Q  284 caactactggtttattgtttattaaagaaaaaat 317  Q
    |||||| || ||| || || ||||||||||||||    
T  28591645 caactattgatttgtttttcattaaagaaaaaat 28591678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 206 - 291
Target Start/End: Original strand, 34381741 - 34381822
Alignment:
Q  206 tttaagatttttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattctaatcaactact 291  Q
    |||||| |||||||||| ||||||| |||| |||||||||||| |||    |||||||||||| |||||||| |||||||||||||    
T  34381741 tttaaggtttttacacacatattaagaaatacattgattaaaaaaaa----gatgttattttaacaaattatcctaatcaactact 34381822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 263 - 316
Target Start/End: Original strand, 8336404 - 8336457
Alignment:
Q  263 attttaccaaattattctaatcaactactggtttattgtttattaaagaaaaaa 316  Q
    ||||||||||||||| ||||||||||| |||||| || ||||||||||||||||    
T  8336404 attttaccaaattatcctaatcaactattggtttgttttttattaaagaaaaaa 8336457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 214 - 315
Target Start/End: Complemental strand, 41645440 - 41645339
Alignment:
Q  214 ttttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattctaatcaactactggtttattgtttattaaagaaa 313  Q
    ||||||||  ||||||  ||||||||| |||||||| || |||| || ||||||| ||||||||| |||||||| | |||||| || || ||||||||||    
T  41645440 ttttacacgcatattaggaaattcattaattaaaagtaatagagttgatattttatcaaattattttaatcaaccattggtttgtttttcattaaagaaa 41645341  T
Q  314 aa 315  Q
    ||    
T  41645340 aa 41645339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 214 - 277
Target Start/End: Original strand, 27557769 - 27557832
Alignment:
Q  214 ttttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattat 277  Q
    ||||| ||| ||||||| |||| |||| |||||||||| |||||||||||||||| ||||||||    
T  27557769 ttttatacacatattaagaaatacattaattaaaagaataagagatgttattttatcaaattat 27557832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 263 - 317
Target Start/End: Original strand, 2729783 - 2729837
Alignment:
Q  263 attttaccaaattattctaatcaactactggtttattgtttattaaagaaaaaat 317  Q
    ||||||||||||||| ||||||||||| |||||| || || ||||||||||||||    
T  2729783 attttaccaaattatcctaatcaactattggtttgtttttcattaaagaaaaaat 2729837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 263 - 317
Target Start/End: Original strand, 34446024 - 34446078
Alignment:
Q  263 attttaccaaattattctaatcaactactggtttattgtttattaaagaaaaaat 317  Q
    ||||||||||||||| ||||||||||| |||||| || || ||||||||||||||    
T  34446024 attttaccaaattatcctaatcaactattggtttgtttttcattaaagaaaaaat 34446078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 263 - 317
Target Start/End: Original strand, 42661937 - 42661991
Alignment:
Q  263 attttaccaaattattctaatcaactactggtttattgtttattaaagaaaaaat 317  Q
    ||||||||||||||| ||||||||||| | |||| || |||||||||||||||||    
T  42661937 attttaccaaattatcctaatcaactattagtttgttttttattaaagaaaaaat 42661991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 263 - 317
Target Start/End: Original strand, 42978070 - 42978124
Alignment:
Q  263 attttaccaaattattctaatcaactactggtttattgtttattaaagaaaaaat 317  Q
    ||||||||||||||| ||||||||||| |||||| || || ||||||||||||||    
T  42978070 attttaccaaattatcctaatcaactattggtttgtttttcattaaagaaaaaat 42978124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 220 - 277
Target Start/End: Complemental strand, 11195273 - 11195216
Alignment:
Q  220 acatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattat 277  Q
    ||||||||||| |||| |||| ||||||||||| | | ||||||||||||||||||||    
T  11195273 acatatattaagaaatccattaattaaaagaaagaaatatgttattttaccaaattat 11195216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 263 - 316
Target Start/End: Original strand, 29807311 - 29807364
Alignment:
Q  263 attttaccaaattattctaatcaactactggtttattgtttattaaagaaaaaa 316  Q
    ||||||||||||||| ||||||||||| |||||| || |||| |||||||||||    
T  29807311 attttaccaaattatcctaatcaactattggtttgttttttactaaagaaaaaa 29807364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 263 - 316
Target Start/End: Original strand, 39335200 - 39335253
Alignment:
Q  263 attttaccaaattattctaatcaactactggtttattgtttattaaagaaaaaa 316  Q
    ||||||||||||||| ||||||||||| |||||| || || |||||||||||||    
T  39335200 attttaccaaattatcctaatcaactattggtttgtttttcattaaagaaaaaa 39335253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 250 - 317
Target Start/End: Complemental strand, 7721263 - 7721196
Alignment:
Q  250 aaaaagagatgttattttaccaaattattctaatcaactactggtttattgtttattaaagaaaaaat 317  Q
    ||||||||||||||||||| |||||||| |||||||| || |||||| ||  |  |||||||||||||    
T  7721263 aaaaagagatgttattttaacaaattatcctaatcaattattggtttgtttgtctttaaagaaaaaat 7721196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 262 - 317
Target Start/End: Complemental strand, 14006049 - 14005994
Alignment:
Q  262 tattttaccaaattattctaatcaactactggtttattgtttattaaagaaaaaat 317  Q
    |||||||||||||||| |||||||| || |||||| || || ||||||||||||||    
T  14006049 tattttaccaaattatcctaatcaaatattggtttgtttttcattaaagaaaaaat 14005994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 259 - 317
Target Start/End: Original strand, 7748891 - 7748949
Alignment:
Q  259 tgttattttaccaaattattctaatcaactactggtttattgtttattaaagaaaaaat 317  Q
    |||||| |||||||||||||||||| || || |||||| || || ||||||||||||||    
T  7748891 tgttatattaccaaattattctaattaattattggtttgtttttcattaaagaaaaaat 7748949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 215 - 277
Target Start/End: Original strand, 10344892 - 10344954
Alignment:
Q  215 tttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattat 277  Q
    |||||||| ||||||| |||| || ||||||||||||| |||   ||||||||||||||||||    
T  10344892 tttacacacatattaagaaatgcaatgattaaaagaaagagaatggttattttaccaaattat 10344954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 215 - 277
Target Start/End: Complemental strand, 32158735 - 32158673
Alignment:
Q  215 tttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattat 277  Q
    |||||||| ||||||| |||| || ||||||||||||| |||   ||||||||||||||||||    
T  32158735 tttacacacatattaagaaatgcaatgattaaaagaaagagaatggttattttaccaaattat 32158673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 263 - 317
Target Start/End: Complemental strand, 39730102 - 39730048
Alignment:
Q  263 attttaccaaattattctaatcaactactggtttattgtttattaaagaaaaaat 317  Q
    ||||||||||||||| ||||||||||| | |||| || || ||||||||||||||    
T  39730102 attttaccaaattatcctaatcaactattcgtttgtttttcattaaagaaaaaat 39730048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 263 - 316
Target Start/End: Complemental strand, 13761876 - 13761823
Alignment:
Q  263 attttaccaaattattctaatcaactactggtttattgtttattaaagaaaaaa 316  Q
    ||||||| |||||||  |||||||||| ||||||||| || |||||||||||||    
T  13761876 attttacaaaattatcttaatcaactattggtttatttttcattaaagaaaaaa 13761823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 263 - 316
Target Start/End: Complemental strand, 39504881 - 39504828
Alignment:
Q  263 attttaccaaattattctaatcaactactggtttattgtttattaaagaaaaaa 316  Q
    ||||||||||||||||||||||||||| | |||| || || | |||||||||||    
T  39504881 attttaccaaattattctaatcaactattagtttgtttttcaataaagaaaaaa 39504828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 215 - 295
Target Start/End: Original strand, 43584336 - 43584416
Alignment:
Q  215 tttacacatatattaaaaaattcattgattaaaagaaaaagagatg-ttattttaccaaattattctaatcaactactggtt 295  Q
    |||||||| ||||||| |||| || ||||||||||||| ||| ||| ||||||||||||||||| || || ||||| |||||    
T  43584336 tttacacacatattaagaaatacaatgattaaaagaaagaga-atgattattttaccaaattatccttattaactattggtt 43584416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 67; Significance: 1e-29; HSPs: 44)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 183 - 317
Target Start/End: Complemental strand, 29568131 - 29567997
Alignment:
Q  183 catccgttttaaaatgaaccttatttaagatttttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattctaa 282  Q
    ||||||||| ||||||||  |  |||||| |||||||||| ||||||| |||| |||| ||||||||||| | | |||||||||||||||||||||||||    
T  29568131 catccgtttcaaaatgaatgtcgtttaaggtttttacacacatattaagaaatgcattaattaaaagaaagaaatatgttattttaccaaattattctaa 29568032  T
Q  283 tcaactactggtttattgtttattaaagaaaaaat 317  Q
    ||||||| |||||| || || ||||||||||||||    
T  29568031 tcaactattggtttgtttttcattaaagaaaaaat 29567997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 179 - 317
Target Start/End: Original strand, 8894927 - 8895065
Alignment:
Q  179 acttcatccgttttaaaatgaaccttatttaagatttttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattatt 278  Q
    |||||||||||||||||||||   |  ||||||||||||| | | ||||||| |||| |||| ||||||||||| ||||||||||||||||||||||||     
T  8894927 acttcatccgttttaaaatgagtgtcgtttaagatttttatatacatattaagaaatgcattaattaaaagaaagagagatgttattttaccaaattatc 8895026  T
Q  279 ctaatcaactactggtttattgtttattaaagaaaaaat 317  Q
    ||||||||||| || ||| || || |||||| |||||||    
T  8895027 ctaatcaactattgatttgtttttcattaaaaaaaaaat 8895065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 185 - 315
Target Start/End: Original strand, 26594987 - 26595117
Alignment:
Q  185 tccgttttaaaatgaaccttatttaagatttttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattctaatc 284  Q
    ||||||| ||||||||  |  |||||| |||||||||| ||||||| |||| |||| ||||||||||| |||||||||||||||||||||||| ||||||    
T  26594987 tccgtttcaaaatgaatgtcgtttaaggtttttacacacatattaagaaatacattaattaaaagaaagagagatgttattttaccaaattatcctaatc 26595086  T
Q  285 aactactggtttattgtttattaaagaaaaa 315  Q
    || || |||||| || || ||||||||||||    
T  26595087 aattattggtttgtttttcattaaagaaaaa 26595117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 179 - 316
Target Start/End: Original strand, 18794454 - 18794591
Alignment:
Q  179 acttcatccgttttaaaatgaaccttatttaagatttttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattatt 278  Q
    ||||| ||||||||||||||||  |  ||||| ||||||||||| ||||||| |||| |||| ||||||||||| | | |||||||||||||||||||||    
T  18794454 acttcttccgttttaaaatgaatgtcgtttaatatttttacacacatattaataaatgcattaattaaaagaaagaaatatgttattttaccaaattatt 18794553  T
Q  279 ctaatcaactactggtttattgtttattaaagaaaaaa 316  Q
    ||||||||||| | |||| || |  |||||||||||||    
T  18794554 ctaatcaactattagtttgttttccattaaagaaaaaa 18794591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 213 - 317
Target Start/End: Original strand, 8989585 - 8989689
Alignment:
Q  213 tttttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattctaatcaactactggtttattgtttattaaagaa 312  Q
    |||||||||| ||||||| |||| |||| ||||||||||| | ||||||||||||||||||||||| |||||||||| |||||| || || |||||||||    
T  8989585 tttttacacacatattaagaaatgcattaattaaaagaaagaaagatgttattttaccaaattattataatcaactattggtttgtttttcattaaagaa 8989684  T
Q  313 aaaat 317  Q
    |||||    
T  8989685 aaaat 8989689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 213 - 317
Target Start/End: Original strand, 25560818 - 25560922
Alignment:
Q  213 tttttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattctaatcaactactggtttattgtttattaaagaa 312  Q
    |||||||||||||||||| |||| |||| ||||||||||| ||||||||||||||||||||||||  |||||||||| | |||| || || |||||||||    
T  25560818 tttttacacatatattaagaaatacattaattaaaagaaagagagatgttattttaccaaattatcataatcaactattagtttgtttttcattaaagaa 25560917  T
Q  313 aaaat 317  Q
    |||||    
T  25560918 aaaat 25560922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 213 - 316
Target Start/End: Complemental strand, 28538410 - 28538307
Alignment:
Q  213 tttttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattctaatcaactactggtttattgtttattaaagaa 312  Q
    |||| ||||||||| ||  ||||  ||| ||||||||||| ||||||||||||||||||||||||  |||||||||| ||||||||| || |||||||||    
T  28538410 ttttcacacatatagtaggaaatgtattaattaaaagaaagagagatgttattttaccaaattatcataatcaactattggtttatttttcattaaagaa 28538311  T
Q  313 aaaa 316  Q
    ||||    
T  28538310 aaaa 28538307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 219 - 317
Target Start/End: Original strand, 31699241 - 31699339
Alignment:
Q  219 cacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattctaatcaactactggtttattgtttattaaagaaaaaat 317  Q
    |||| ||||||| |||  |||| ||||||||||| ||||||||||||||||||||||||  |||||||||| |||||| || || ||||||||||||||    
T  31699241 cacacatattaagaaacacattaattaaaagaaagagagatgttattttaccaaattatcataatcaactattggtttgtttttcattaaagaaaaaat 31699339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 185 - 296
Target Start/End: Complemental strand, 5211 - 5101
Alignment:
Q  185 tccgttttaaaatgaaccttatttaagatttttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattctaatc 284  Q
    ||||||||||||||||  | |||| || |||||||||| || |||| |||| |||| ||| ||||||| | |||||||||||||||||||||| ||||||    
T  5211 tccgttttaaaatgaatgtcatttgaggtttttacacacat-ttaataaatgcattaatttaaagaaagatagatgttattttaccaaattatcctaatc 5113  T
Q  285 aactactggttt 296  Q
    ||||| ||||||    
T  5112 aactattggttt 5101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 242 - 316
Target Start/End: Original strand, 7191181 - 7191255
Alignment:
Q  242 attaaaagaaaaagagatgttattttaccaaattattctaatcaactactggtttattgtttattaaagaaaaaa 316  Q
    ||||||||||| |||||||||||||||||||||||| ||||||||||| | ||||||| ||  ||||||||||||    
T  7191181 attaaaagaaagagagatgttattttaccaaattatcctaatcaactatttgtttatttttcgttaaagaaaaaa 7191255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 189 - 310
Target Start/End: Original strand, 44556991 - 44557112
Alignment:
Q  189 ttttaaaatgaaccttatttaagatttttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattctaatcaact 288  Q
    ||||||||||||  |  |||||| |||||| ||| |||||||||||| |||| ||||||||||| ||| ||||||||||||||||||||  |||| ||||    
T  44556991 ttttaaaatgaatgtcgtttaaggtttttatacacatattaaaaaatgcattaattaaaagaaagagaaatgttattttaccaaattatcttaataaact 44557090  T
Q  289 actggtttattgtttattaaag 310  Q
      |||||| || || |||||||    
T  44557091 gttggtttgtttttcattaaag 44557112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 214 - 289
Target Start/End: Original strand, 16757145 - 16757220
Alignment:
Q  214 ttttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattctaatcaacta 289  Q
    ||||||||| ||||||| |||| |||| ||||||||||| ||| |||||||||||||||| ||| |||||||||||    
T  16757145 ttttacacacatattaagaaatacattaattaaaagaaagagaaatgttattttaccaaactatcctaatcaacta 16757220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 242 - 317
Target Start/End: Complemental strand, 27209165 - 27209090
Alignment:
Q  242 attaaaagaaaaagagatgttattttaccaaattattctaatcaactactggtttattgtttattaaagaaaaaat 317  Q
    ||||||||||| ||| |||||||||||||||||||| ||||||||||| || ||| || || ||||||||||||||    
T  27209165 attaaaagaaagagatatgttattttaccaaattatcctaatcaactattgatttgtttttcattaaagaaaaaat 27209090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 213 - 286
Target Start/End: Original strand, 51244781 - 51244854
Alignment:
Q  213 tttttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattctaatcaa 286  Q
    |||||||||||||||||||||||  ||| ||||||||||| ||| |||||||||||| ||||||| ||| ||||    
T  51244781 tttttacacatatattaaaaaataaattaattaaaagaaagagatatgttattttactaaattatcctagtcaa 51244854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 185 - 295
Target Start/End: Original strand, 14373341 - 14373451
Alignment:
Q  185 tccgttttaaaatgaaccttatttaagatttttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattctaatc 284  Q
    ||||||||||||||||  |  ||| || | |||||||| ||||||| |||| || |||||||||||||||||   |||||||||||||||||| || ||     
T  14373341 tccgttttaaaatgaatgtcgttttaggtgtttacacacatattaagaaatgcaatgattaaaagaaaaagaatggttattttaccaaattatccttatt 14373440  T
Q  285 aactactggtt 295  Q
    ||||| |||||    
T  14373441 aactattggtt 14373451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 237 - 295
Target Start/End: Original strand, 33694392 - 33694450
Alignment:
Q  237 cattgattaaaagaaaaagagatgttattttaccaaattattctaatcaactactggtt 295  Q
    |||| ||||||| ||| ||| |||||||||||||||||||||||||||||||| |||||    
T  33694392 cattaattaaaataaagagatatgttattttaccaaattattctaatcaactattggtt 33694450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 206 - 315
Target Start/End: Original strand, 5225768 - 5225873
Alignment:
Q  206 tttaagatttttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattctaatcaactactggtttattgtttat 305  Q
    |||||| ||||||| || ||||||| ||||  ||| |||||||||    |||| ||||||||||||||||||  |||| ||||| ||||||||| || ||    
T  5225768 tttaaggtttttacgcacatattaagaaatatattaattaaaaga----gagaagttattttaccaaattatcataattaactattggtttatttttcat 5225863  T
Q  306 taaagaaaaa 315  Q
    ||||||||||    
T  5225864 taaagaaaaa 5225873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 247 - 291
Target Start/End: Complemental strand, 28563016 - 28562972
Alignment:
Q  247 aagaaaaagagatgttattttaccaaattattctaatcaactact 291  Q
    |||||| ||| ||||||||||||||||||||||||||||||||||    
T  28563016 aagaaagagatatgttattttaccaaattattctaatcaactact 28562972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 263 - 317
Target Start/End: Complemental strand, 15823190 - 15823136
Alignment:
Q  263 attttaccaaattattctaatcaactactggtttattgtttattaaagaaaaaat 317  Q
    ||||||||||||||| ||||||||||| |||||| || || ||||||||||||||    
T  15823190 attttaccaaattatcctaatcaactaatggtttgtttttcattaaagaaaaaat 15823136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 263 - 317
Target Start/End: Original strand, 49468706 - 49468760
Alignment:
Q  263 attttaccaaattattctaatcaactactggtttattgtttattaaagaaaaaat 317  Q
    ||||||||||||||| ||||||||||| |||||| || || ||||||||||||||    
T  49468706 attttaccaaattatcctaatcaactattggtttgtttttcattaaagaaaaaat 49468760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 263 - 317
Target Start/End: Original strand, 52125131 - 52125185
Alignment:
Q  263 attttaccaaattattctaatcaactactggtttattgtttattaaagaaaaaat 317  Q
    ||||||||||||||||||||||||||| |||||| || || |||||| |||||||    
T  52125131 attttaccaaattattctaatcaactattggtttgtttttcattaaacaaaaaat 52125185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 185 - 259
Target Start/End: Complemental strand, 52707075 - 52707001
Alignment:
Q  185 tccgttttaaaatgaaccttatttaagatttttacacatatattaaaaaattcattgattaaaagaaaaagagat 259  Q
    ||||||||||||||||| |  ||||||||||||||||| ||||||| ||||  ||| | ||||||||| ||||||    
T  52707075 tccgttttaaaatgaacgtggtttaagatttttacacacatattaagaaatatattaactaaaagaaagagagat 52707001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 264 - 317
Target Start/End: Original strand, 46286814 - 46286867
Alignment:
Q  264 ttttaccaaattattctaatcaactactggtttattgtttattaaagaaaaaat 317  Q
    |||||||||||||| ||||||||||| |||||| || || ||||||||||||||    
T  46286814 ttttaccaaattatcctaatcaactattggtttgtttttcattaaagaaaaaat 46286867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 215 - 295
Target Start/End: Original strand, 34032038 - 34032118
Alignment:
Q  215 tttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattctaatcaactactggtt 295  Q
    |||||| | |||||||||||| || ||||||||||||| |||   |||||||||||||||||| || || ||||| |||||    
T  34032038 tttacatacatattaaaaaatgcaatgattaaaagaaagagaatggttattttaccaaattatccttattaactattggtt 34032118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 215 - 295
Target Start/End: Complemental strand, 50249503 - 50249423
Alignment:
Q  215 tttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattctaatcaactactggtt 295  Q
    |||||||| ||||||| |||| || ||||||||||||| |||   |||||||||||||||||| || || ||||| |||||    
T  50249503 tttacacacatattaagaaatgcaatgattaaaagaaagagaatggttattttaccaaattatccttattaactattggtt 50249423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 206 - 280
Target Start/End: Complemental strand, 14607615 - 14607543
Alignment:
Q  206 tttaagatttttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattct 280  Q
    ||||||||||||||||| ||||||  |||| ||| |||||||||  |||||  |||| |||||||||||||||||    
T  14607615 tttaagatttttacacacatattatgaaatgcatggattaaaag--aaagaattgttgttttaccaaattattct 14607543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 263 - 317
Target Start/End: Complemental strand, 25151966 - 25151911
Alignment:
Q  263 attttaccaaattattctaatcaactactggtttattgttt-attaaagaaaaaat 317  Q
    ||||||||||||||| ||||||||||| |||||| || ||| ||||||||||||||    
T  25151966 attttaccaaattatactaatcaactattggttttttttttcattaaagaaaaaat 25151911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 206 - 277
Target Start/End: Complemental strand, 39125805 - 39125734
Alignment:
Q  206 tttaagatttttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattat 277  Q
    |||||| |||||||||| ||||||| |||| || ||||||||||||| |||  ||||||||| | |||||||    
T  39125805 tttaaggtttttacacacatattaagaaatgcaatgattaaaagaaagagaattgttatttttctaaattat 39125734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 261 - 316
Target Start/End: Original strand, 49900750 - 49900805
Alignment:
Q  261 ttattttaccaaattattctaatcaactactggtttattgtttattaaagaaaaaa 316  Q
    ||||||||| ||||||| ||||||||||| ||||||||| ||  ||||||||||||    
T  49900750 ttattttactaaattatcctaatcaactattggtttatttttctttaaagaaaaaa 49900805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 179 - 280
Target Start/End: Original strand, 2671053 - 2671155
Alignment:
Q  179 acttcatccgttttaaaatgaaccttatttaagatttttacacatatatt-aaaaaattcattgattaaaagaaaaagagatgttattttaccaaattat 277  Q
    ||||||||||||||||| ||||  |  |||||| |||| | ||||||||| ||||||| || ||||| ||||||| | | || |||||||| ||||||||    
T  2671053 acttcatccgttttaaattgaatatcgtttaaggttttaatacatatattaaaaaaatacaatgattgaaagaaagaaaaattttattttatcaaattat 2671152  T
Q  278 tct 280  Q
    |||    
T  2671153 tct 2671155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 263 - 317
Target Start/End: Complemental strand, 5463731 - 5463677
Alignment:
Q  263 attttaccaaattattctaatcaactactggtttattgtttattaaagaaaaaat 317  Q
    |||||||||||| || ||||||||||| |||||| || || ||||||||||||||    
T  5463731 attttaccaaataatcctaatcaactattggtttgtttttcattaaagaaaaaat 5463677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 242 - 316
Target Start/End: Complemental strand, 9092768 - 9092694
Alignment:
Q  242 attaaaagaaaaagagatgttattttaccaaattattctaatcaactactggtttattgtttattaaagaaaaaa 316  Q
    ||||||| ||| ||||||||||||||   |||||||||||||||| || || ||| || || |||||||||||||    
T  9092768 attaaaataaagagagatgttattttctaaaattattctaatcaaatattgatttgtttttcattaaagaaaaaa 9092694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 215 - 277
Target Start/End: Complemental strand, 30293529 - 30293467
Alignment:
Q  215 tttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattat 277  Q
    |||||||||||||||| |||| || ||||||||||||| | |   ||||||||||||||||||    
T  30293529 tttacacatatattaagaaatgcaatgattaaaagaaagataatggttattttaccaaattat 30293467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 263 - 317
Target Start/End: Original strand, 32806933 - 32806987
Alignment:
Q  263 attttaccaaattattctaatcaactactggtttattgtttattaaagaaaaaat 317  Q
    |||||||| |||||| ||||||||||| |||||| || || ||||||||||||||    
T  32806933 attttaccgaattatcctaatcaactattggtttgtttttcattaaagaaaaaat 32806987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 263 - 317
Target Start/End: Original strand, 38530834 - 38530888
Alignment:
Q  263 attttaccaaattattctaatcaactactggtttattgtttattaaagaaaaaat 317  Q
    ||||||| ||||||| ||||||||||| |||||| || || ||||||||||||||    
T  38530834 attttactaaattatcctaatcaactattggtttgtttttcattaaagaaaaaat 38530888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 263 - 317
Target Start/End: Complemental strand, 48009166 - 48009112
Alignment:
Q  263 attttaccaaattattctaatcaactactggtttattgtttattaaagaaaaaat 317  Q
    ||||||||||||||| ||||||||||| |||||| || || | ||||||||||||    
T  48009166 attttaccaaattatcctaatcaactattggtttgtttttcaataaagaaaaaat 48009112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 263 - 316
Target Start/End: Original strand, 1740635 - 1740688
Alignment:
Q  263 attttaccaaattattctaatcaactactggtttattgtttattaaagaaaaaa 316  Q
    |||||||||||||||  |||||||||| | |||| || ||||||||||||||||    
T  1740635 attttaccaaattatcataatcaactattagtttgttttttattaaagaaaaaa 1740688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 178 - 271
Target Start/End: Complemental strand, 11799701 - 11799608
Alignment:
Q  178 cacttcatccgttttaaaatgaaccttatttaagatttttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttacca 271  Q
    |||||||||||||||||||||||  |  |||||||||||   ||| ||||||| |||  || || |||||||||| |||  |||||||||||||    
T  11799701 cacttcatccgttttaaaatgaatgtcgtttaagattttataacacatattaagaaaaacaatgtttaaaagaaagagaattgttattttacca 11799608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 263 - 316
Target Start/End: Complemental strand, 31798746 - 31798693
Alignment:
Q  263 attttaccaaattattctaatcaactactggtttattgtttattaaagaaaaaa 316  Q
    |||||||||||||||  |||||||||| |||||| || || |||||||||||||    
T  31798746 attttaccaaattatcttaatcaactattggtttgtttttcattaaagaaaaaa 31798693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 263 - 316
Target Start/End: Complemental strand, 44108757 - 44108704
Alignment:
Q  263 attttaccaaattattctaatcaactactggtttattgtttattaaagaaaaaa 316  Q
    ||||||||||||||| |||| |||||| |||||| || || |||||||||||||    
T  44108757 attttaccaaattatcctaaacaactattggtttgtttttcattaaagaaaaaa 44108704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 263 - 316
Target Start/End: Complemental strand, 50094386 - 50094333
Alignment:
Q  263 attttaccaaattattctaatcaactactggtttattgtttattaaagaaaaaa 316  Q
    ||||||||||||||| ||||||||||| ||||||  | || |||||||||||||    
T  50094386 attttaccaaattatcctaatcaactattggtttgcttttcattaaagaaaaaa 50094333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 213 - 314
Target Start/End: Original strand, 2610782 - 2610879
Alignment:
Q  213 tttttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattctaatcaactactggtttattgtttattaaagaa 312  Q
    |||||| ||| ||||||| ||||||||| ||||||| | |||    |||||||||||||| |||| |||||||| |  ||||||||| || |||||| ||    
T  2610782 tttttatacacatattaagaaattcattaattaaaaaataaa----tgttattttaccaagttatcctaatcaattgttggtttatttttcattaaaaaa 2610877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 263 - 315
Target Start/End: Original strand, 49426414 - 49426466
Alignment:
Q  263 attttaccaaattattctaatcaactactggtttattgtttattaaagaaaaa 315  Q
    ||||||||||||||| ||||||||||| |||||| || || |||||| |||||    
T  49426414 attttaccaaattatcctaatcaactattggtttgttcttcattaaaaaaaaa 49426466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 210 - 277
Target Start/End: Original strand, 52023926 - 52023993
Alignment:
Q  210 agatttttacacatatattaaaaaattcattgattaaaagaaaaagagatg-ttattttaccaaattat 277  Q
    |||| |||||||| ||||||| |||| || ||||||||||||| ||| ||| |||||||||||||||||    
T  52023926 agatctttacacacatattaagaaatgcaatgattaaaagaaagaga-atgattattttaccaaattat 52023993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 66; Significance: 5e-29; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 188 - 317
Target Start/End: Original strand, 13011270 - 13011399
Alignment:
Q  188 gttttaaaatgaaccttatttaagatttttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattctaatcaac 287  Q
    |||| ||||||||| |  ||||||||||||||||| ||||||| |||| |||| ||||||||||| ||||||||||||||||||||||||  ||||||||    
T  13011270 gtttcaaaatgaacgtcgtttaagatttttacacacatattaagaaatgcattaattaaaagaaagagagatgttattttaccaaattatcttaatcaac 13011369  T
Q  288 tactggtttattgtttattaaagaaaaaat 317  Q
    ||  ||||| || || ||||||||||||||    
T  13011370 tatcggtttgtttttcattaaagaaaaaat 13011399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 179 - 316
Target Start/End: Original strand, 12459232 - 12459369
Alignment:
Q  179 acttcatccgttttaaaatgaaccttatttaagatttttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattatt 278  Q
    ||||| ||||||| ||||||||  || |||||| |||||||||| ||| ||| |||| |||| ||||||||||| | |||| |||||||||||||||||     
T  12459232 acttcctccgtttaaaaatgaatgttgtttaaggtttttacacacatactaagaaatacattaattaaaagaaagaaagatattattttaccaaattatc 12459331  T
Q  279 ctaatcaactactggtttattgtttattaaagaaaaaa 316  Q
    ||||||||||| |||| | || || |||||||||||||    
T  12459332 ctaatcaactattggtctgtttttcattaaagaaaaaa 12459369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 213 - 316
Target Start/End: Original strand, 17552194 - 17552297
Alignment:
Q  213 tttttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattctaatcaactactggtttattgtttattaaagaa 312  Q
    |||||||||| | |||||||||| |||| ||||||||||| |||||||| ||||||||||||||| ||||||||| | |||||| || || |||||||||    
T  17552194 tttttacacacagattaaaaaatacattaattaaaagaaagagagatgtaattttaccaaattatcctaatcaacaattggtttgtttttcattaaagaa 17552293  T
Q  313 aaaa 316  Q
    ||||    
T  17552294 aaaa 17552297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 206 - 317
Target Start/End: Original strand, 20226161 - 20226272
Alignment:
Q  206 tttaagatttttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattctaatcaactactggtttattgtttat 305  Q
    |||||| ||||| |||||||||||| |||| |||| ||| ||||||| |||||||||||||||||||||||| ||||||||||| || ||| || || ||    
T  20226161 tttaaggtttttccacatatattaagaaatgcattaatttaaagaaagagagatgttattttaccaaattatactaatcaactattgatttgtttttcat 20226260  T
Q  306 taaagaaaaaat 317  Q
    ||||||| ||||    
T  20226261 taaagaataaat 20226272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 206 - 317
Target Start/End: Original strand, 22120145 - 22120256
Alignment:
Q  206 tttaagatttttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattctaatcaactactggtttattgtttat 305  Q
    |||||| ||||| |||||||||||| |||| |||| ||| ||||||| |||||||||||||||||||||||| ||||||||||| || ||| || || ||    
T  22120145 tttaaggtttttccacatatattaagaaatgcattaatttaaagaaagagagatgttattttaccaaattatactaatcaactattgatttgtttttcat 22120244  T
Q  306 taaagaaaaaat 317  Q
    ||||||| ||||    
T  22120245 taaagaataaat 22120256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 206 - 316
Target Start/End: Original strand, 13503784 - 13503893
Alignment:
Q  206 tttaagatttttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattctaatcaactactggtttattgtttat 305  Q
    ||||||||||||||||| ||||||| |||| |||| ||||||||||| ||| |||||||||||||||||||| ||||| ||||| | |||| || || ||    
T  13503784 tttaagatttttacacacatattaagaaatgcattaattaaaagaaagagaaatgttattttaccaaattatcctaataaacta-ttgtttgtttttcat 13503882  T
Q  306 taaagaaaaaa 316  Q
    |||||||||||    
T  13503883 taaagaaaaaa 13503893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 208 - 317
Target Start/End: Original strand, 1502695 - 1502804
Alignment:
Q  208 taagatttttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattctaatcaactactggtttattgtttatta 307  Q
    ||||||||||||| | ||| ||| |||| |||||||||||||||| ||||||||||||||||||||||||  |||| ||||| |||||| || || ||||    
T  1502695 taagatttttacatacataataagaaatgcattgattaaaagaaatagagatgttattttaccaaattatcttaattaactattggtttgtttttcatta 1502794  T
Q  308 aagaaaaaat 317  Q
    || |||||||    
T  1502795 aataaaaaat 1502804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 188 - 317
Target Start/End: Original strand, 3988667 - 3988795
Alignment:
Q  188 gttttaaaatgaaccttatttaagatttttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattctaatcaac 287  Q
    |||||||||||||  |  ||||||||||||||||| ||||| | |||| |||  ||||||||||| ||||||||||||||||||||||||  ||||||||    
T  3988667 gttttaaaatgaatgtcgtttaagatttttacacacatattgagaaatgcata-attaaaagaaagagagatgttattttaccaaattatcataatcaac 3988765  T
Q  288 tactggtttattgtttattaaagaaaaaat 317  Q
    || | |||| || || ||||||||||||||    
T  3988766 tatttgtttgtttttcattaaagaaaaaat 3988795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 218 - 317
Target Start/End: Complemental strand, 8957968 - 8957869
Alignment:
Q  218 acacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattctaatcaactactggtttattgtttattaaagaaaaaat 317  Q
    ||||| ||||||| |||| |||| |||||| |||| ||| ||||||| |||||||||||| ||||||||||| |||||| || |||||||||||||||||    
T  8957968 acacacatattaagaaatacattaattaaatgaaagagatatgttatcttaccaaattatcctaatcaactattggtttgttttttattaaagaaaaaat 8957869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 218 - 317
Target Start/End: Original strand, 8961389 - 8961488
Alignment:
Q  218 acacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattctaatcaactactggtttattgtttattaaagaaaaaat 317  Q
    ||||| ||||||| |||| |||| |||||| |||| ||| ||||||| |||||||||||| ||||||||||| |||||| || |||||||||||||||||    
T  8961389 acacacatattaagaaatacattaattaaatgaaagagatatgttatcttaccaaattatcctaatcaactattggtttgttttttattaaagaaaaaat 8961488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 244 - 317
Target Start/End: Complemental strand, 9940822 - 9940749
Alignment:
Q  244 taaaagaaaaagagatgttattttaccaaattattctaatcaactactggtttattgtttattaaagaaaaaat 317  Q
    ||||||||| |||||||||||||||||||||||| ||||||||||| |||||| || || ||||||||||||||    
T  9940822 taaaagaaagagagatgttattttaccaaattatcctaatcaactattggtttgtttttcattaaagaaaaaat 9940749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 206 - 315
Target Start/End: Original strand, 21271343 - 21271452
Alignment:
Q  206 tttaagatttttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattctaatcaactactggtttattgtttat 305  Q
    |||||| |||||||||| ||||||| |||| ||||  |||||| ||| |||||||||||||||||||| ||| ||||||||||| || ||| || || ||    
T  21271343 tttaaggtttttacacacatattaagaaatgcattatttaaaataaagagagatgttattttaccaaagtatcctaatcaactattgatttgttcttcat 21271442  T
Q  306 taaagaaaaa 315  Q
    ||||||||||    
T  21271443 taaagaaaaa 21271452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 185 - 296
Target Start/End: Complemental strand, 32194042 - 32193932
Alignment:
Q  185 tccgttttaaaatgaaccttatttaagatttttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattctaatc 284  Q
    ||||||| ||||||||  |  |||||| |||||||||||||||||| ||||  ||| | ||||| ||| |||||||||||||||||||||||| ||||||    
T  32194042 tccgtttcaaaatgaatgtcgtttaaggtttttacacatatattaagaaatgtattaaataaaa-aaatagagatgttattttaccaaattatcctaatc 32193944  T
Q  285 aactactggttt 296  Q
    ||||| ||||||    
T  32193943 aactattggttt 32193932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 206 - 315
Target Start/End: Complemental strand, 17828495 - 17828386
Alignment:
Q  206 tttaagatttttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattctaatcaactactggtttattgtttat 305  Q
    |||||| ||| |||||| | ||||| |||| |||| ||||||||||| | ||||||||||||||||||||||  |||||||| | |||||| || || ||    
T  17828495 tttaaggtttctacacacaaattaagaaatgcattaattaaaagaaagaaagatgttattttaccaaattatcttaatcaaccattggtttgtttttcat 17828396  T
Q  306 taaagaaaaa 315  Q
    ||||||||||    
T  17828395 taaagaaaaa 17828386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 213 - 317
Target Start/End: Original strand, 18737035 - 18737139
Alignment:
Q  213 tttttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattctaatcaactactggtttattgtttattaaagaa 312  Q
    ||||||| || |||||||||||| |||| ||||||||||| ||||| | || |||| |||||||| ||||| ||||| || |||||| || |||||||||    
T  18737035 tttttacgcacatattaaaaaatgcattaattaaaagaaacagagacgctaatttatcaaattatcctaattaactattgttttatttttcattaaagaa 18737134  T
Q  313 aaaat 317  Q
    |||||    
T  18737135 aaaat 18737139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 218 - 309
Target Start/End: Complemental strand, 12588725 - 12588634
Alignment:
Q  218 acacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattctaatcaactactggtttattgtttattaaa 309  Q
    |||| |||||||| |||| |||| ||||||||||| |||||| |||||||||||||||||  ||| |||||| || |||||| |||||||||    
T  12588725 acacttatattaagaaatgcattaattaaaagaaagagagattttattttaccaaattatcttaaccaactattgatttattttttattaaa 12588634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 206 - 317
Target Start/End: Original strand, 32619765 - 32619876
Alignment:
Q  206 tttaagatttttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattctaatcaactactggtttattgtttat 305  Q
    |||| |||||||||||| ||||||| |||| |||| ||||||||||| ||| ||||||| |||  |||||||  |||||||||| || ||| || || ||    
T  32619765 tttatgatttttacacacatattaagaaatacattaattaaaagaaagagaaatgttatattattaaattatcttaatcaactattgatttgtttttcat 32619864  T
Q  306 taaagaaaaaat 317  Q
    ||||||||||||    
T  32619865 taaagaaaaaat 32619876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 226 - 316
Target Start/End: Complemental strand, 577254 - 577164
Alignment:
Q  226 attaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattctaatcaactactggtttattgtttattaaagaaaaaa 316  Q
    ||||| |||| |||| ||||||| ||| ||| |||||||||||| ||||||| ||||||||||| |||||| || || |||||||||||||    
T  577254 attaagaaatgcattaattaaaataaagagaaatgttattttactaaattatcctaatcaactattggtttgtttttcattaaagaaaaaa 577164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 206 - 317
Target Start/End: Complemental strand, 3847864 - 3847753
Alignment:
Q  206 tttaagatttttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattctaatcaactactggtttattgtttat 305  Q
    ||||||| ||||||||  ||||||| ||||  ||| ||||||||||| |  |||||||||||||  ||||||  |||||||||| || |||||| || ||    
T  3847864 tttaagacttttacacgcatattaagaaataaattaattaaaagaaagaaggatgttattttacagaattatcttaatcaactattgatttatttttaat 3847765  T
Q  306 taaagaaaaaat 317  Q
    ||||||||||||    
T  3847764 taaagaaaaaat 3847753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 263 - 317
Target Start/End: Complemental strand, 234190 - 234136
Alignment:
Q  263 attttaccaaattattctaatcaactactggtttattgtttattaaagaaaaaat 317  Q
    ||||||||||||||| ||||||||||| |||||| || || ||||||||||||||    
T  234190 attttaccaaattatcctaatcaactattggtttgtttttcattaaagaaaaaat 234136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 243 - 289
Target Start/End: Original strand, 12322861 - 12322907
Alignment:
Q  243 ttaaaagaaaaagagatgttattttaccaaattattctaatcaacta 289  Q
    |||||||||| |||||||||||||||||||||||| ||||| |||||    
T  12322861 ttaaaagaaatagagatgttattttaccaaattatcctaattaacta 12322907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 263 - 317
Target Start/End: Original strand, 31443442 - 31443496
Alignment:
Q  263 attttaccaaattattctaatcaactactggtttattgtttattaaagaaaaaat 317  Q
    ||||||||||||||| ||||||||||| || ||| || |||||||||||||||||    
T  31443442 attttaccaaattatcctaatcaactattgatttgttttttattaaagaaaaaat 31443496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 215 - 295
Target Start/End: Original strand, 4850455 - 4850535
Alignment:
Q  215 tttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattctaatcaactactggtt 295  Q
    |||||||| ||||||| |||| || ||||||||||||| |||   |||||||||||||||||| || || ||||| |||||    
T  4850455 tttacacacatattaagaaatgcaatgattaaaagaaagagaatggttattttaccaaattatccttattaactattggtt 4850535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 185 - 277
Target Start/End: Complemental strand, 29400168 - 29400076
Alignment:
Q  185 tccgttttaaaatgaaccttatttaagatttttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattat 277  Q
    ||||||||||||||    || ||| |||| |||||||| ||||||| |||| || ||||||||||||| |||   ||||||||||||||||||    
T  29400168 tccgttttaaaatgtgtgttgttttagatctttacacacatattaagaaatgcaatgattaaaagaaagagaatggttattttaccaaattat 29400076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 206 - 317
Target Start/End: Original strand, 31233562 - 31233674
Alignment:
Q  206 tttaagatttttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattctaatcaactactggtttattgttt-a 304  Q
    |||||| |||||||||| ||||||| |||| |||| ||||||||||| ||| ||  |||| |||||| ||||   |||||||||  ||||| || ||| |    
T  31233562 tttaaggtttttacacacatattaagaaatacattaattaaaagaaagagaaataatattctaccaagttatctgaatcaactatcggttttttttttca 31233661  T
Q  305 ttaaagaaaaaat 317  Q
    |||||||||||||    
T  31233662 ttaaagaaaaaat 31233674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 263 - 316
Target Start/End: Complemental strand, 19675134 - 19675081
Alignment:
Q  263 attttaccaaattattctaatcaactactggtttattgtttattaaagaaaaaa 316  Q
    ||||||||||||||| ||||||||||| || ||| || || |||||||||||||    
T  19675134 attttaccaaattatcctaatcaactattgatttgtttttcattaaagaaaaaa 19675081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 66; Significance: 5e-29; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 213 - 318
Target Start/End: Complemental strand, 38141155 - 38141050
Alignment:
Q  213 tttttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattctaatcaactactggtttattgtttattaaagaa 312  Q
    |||||||| ||||||||||||||  ||| ||||||||||| ||||||||||||||||||||||||||||||||| || |||||| || || |||||||||    
T  38141155 tttttacatatatattaaaaaatgtattaattaaaagaaatagagatgttattttaccaaattattctaatcaattattggtttgtttttcattaaagaa 38141056  T
Q  313 aaaatt 318  Q
    ||||||    
T  38141055 aaaatt 38141050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 206 - 317
Target Start/End: Original strand, 9189372 - 9189484
Alignment:
Q  206 tttaagatttttacacat-atattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattctaatcaactactggtttattgttta 304  Q
    ||||| |||||||||||  |||||||||||| |||| ||||||| ||||||||||||||||||||||||| ||  |||||||||| |||||| || ||||    
T  9189372 tttaaaatttttacacaacatattaaaaaatgcattaattaaaataaaaagagatgttattttaccaaatcatcgtaatcaactattggtttgtttttta 9189471  T
Q  305 ttaaagaaaaaat 317  Q
    |||||||||||||    
T  9189472 ttaaagaaaaaat 9189484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 206 - 317
Target Start/End: Complemental strand, 8817353 - 8817242
Alignment:
Q  206 tttaagatttttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattctaatcaactactggtttattgtttat 305  Q
    |||||| |||||||| ||||||||| ||||  ||| ||||||||||| ||||| ||||||||| |||||||||||||||||||| || |||||| || ||    
T  8817353 tttaaggtttttacaaatatattaagaaatgtattaattaaaagaaagagagacgttattttatcaaattattctaatcaactattgatttatttttcat 8817254  T
Q  306 taaagaaaaaat 317  Q
    ||||||||||||    
T  8817253 taaagaaaaaat 8817242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 216 - 317
Target Start/End: Complemental strand, 30315512 - 30315411
Alignment:
Q  216 ttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattctaatcaactactggtttattgtttattaaagaaaaa 315  Q
    ||||||| ||||||| |||| |||| ||||| ||||| |||||||||||||||||||||||| ||||||||||| |||||| || || ||||||||||||    
T  30315512 ttacacacatattaagaaatgcattaattaagagaaagagagatgttattttaccaaattatcctaatcaactattggtttgtttttcattaaagaaaaa 30315413  T
Q  316 at 317  Q
    ||    
T  30315412 at 30315411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 224 - 296
Target Start/End: Original strand, 30680779 - 30680850
Alignment:
Q  224 atattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattctaatcaactactggttt 296  Q
    ||||||||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||    
T  30680779 atattaaaaaatgtattgattaaaagaaaaagagatgttattttaccaaattattc-aatcaactattggttt 30680850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 186 - 296
Target Start/End: Original strand, 47823336 - 47823444
Alignment:
Q  186 ccgttttaaaatgaaccttatttaagatttttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattctaatca 285  Q
    |||||||||||||||| || |||||| |||||| ||| ||||||||||||  ||| ||||||||  ||||||||||||||| ||||||| || |||||||    
T  47823336 ccgttttaaaatgaacgttgtttaaggtttttatacacatattaaaaaatgtattaattaaaag--aaagagatgttatttaaccaaataatcctaatca 47823433  T
Q  286 actactggttt 296  Q
    |||| ||||||    
T  47823434 actattggttt 47823444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 206 - 317
Target Start/End: Complemental strand, 48903498 - 48903387
Alignment:
Q  206 tttaagatttttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattctaatcaactactggtttattgtttat 305  Q
    |||||| |||||||| | ||||||| |||| |||| ||||||||||| ||| || |||||||| ||||||||| |||||||||| || ||| || || ||    
T  48903498 tttaagttttttacatacatattaagaaatgcattaattaaaagaaagagatatattattttatcaaattattttaatcaactattgctttgtttttaat 48903399  T
Q  306 taaagaaaaaat 317  Q
    ||||||||||||    
T  48903398 taaagaaaaaat 48903387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 243 - 317
Target Start/End: Complemental strand, 19373761 - 19373687
Alignment:
Q  243 ttaaaagaaaaagagatgttattttaccaaattattctaatcaactactggtttattgtttattaaagaaaaaat 317  Q
    |||||||||| |||||||||||||||||||||| | ||||||||||| |||||| || || ||||||||||||||    
T  19373761 ttaaaagaaagagagatgttattttaccaaattctcctaatcaactattggtttgtttttcattaaagaaaaaat 19373687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 185 - 314
Target Start/End: Original strand, 36844659 - 36844788
Alignment:
Q  185 tccgttttaaaatgaaccttatttaagatttttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattctaatc 284  Q
    ||||||| ||||||||  |  |||||| |||||| ||| ||||||| |||| |||| ||||| ||||| |||||| ||||||||||||||||| ||||||    
T  36844659 tccgtttcaaaatgaatgtcgtttaaggtttttagacacatattaagaaatgcattaattaacagaaagagagatattattttaccaaattatcctaatc 36844758  T
Q  285 aactactggtttattgtttattaaagaaaa 314  Q
    ||||| || ||  || || |||||||||||    
T  36844759 aactattgattagtttttcattaaagaaaa 36844788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 189 - 315
Target Start/End: Original strand, 7230815 - 7230941
Alignment:
Q  189 ttttaaaatgaaccttatttaagatttttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattctaatcaact 288  Q
    ||||||||||||  |  ||||||||||||||||| ||||||| ||||  ||| || |||| ||| ||||||| |||||||  ||||||| ||||||||||    
T  7230815 ttttaaaatgaatgtcgtttaagatttttacacacatattaagaaatgaattaataaaaataaagagagatgatattttagtaaattatcctaatcaact 7230914  T
Q  289 actggtttattgtttattaaagaaaaa 315  Q
    | |||||| ||  | ||||||||||||    
T  7230915 attggtttctttctcattaaagaaaaa 7230941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 185 - 282
Target Start/End: Original strand, 50646058 - 50646155
Alignment:
Q  185 tccgttttaaaatgaaccttatttaagatttttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattctaa 282  Q
    |||||||||||||||   |  ||||||||||||||||| ||||||||||||  ||| ||||||||||| ||||||||||||  | |||||||| ||||    
T  50646058 tccgttttaaaatgagtgtcgtttaagatttttacacacatattaaaaaatgtattaattaaaagaaagagagatgttattcgatcaaattatcctaa 50646155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 246 - 316
Target Start/End: Original strand, 40717648 - 40717717
Alignment:
Q  246 aaagaaaaagagatgttattttaccaaattattctaatcaactactggtttattgtttattaaagaaaaaa 316  Q
    ||||||| ||||||||||||||||||||||||  |||||||||| |||||| || || |||||||||||||    
T  40717648 aaagaaatagagatgttattttaccaaattatcttaatcaactattggtttgtt-ttcattaaagaaaaaa 40717717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 188 - 277
Target Start/End: Original strand, 21324357 - 21324446
Alignment:
Q  188 gttttaaaatgaaccttatttaagatttttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattat 277  Q
    |||||||||||||  | |||||| | ||||||||| |||||||||||| || |||||| |||||||||| |   ||||||||||||||||    
T  21324357 gttttaaaatgaatgtcatttaaaaattttacacaaatattaaaaaatacaatgattagaagaaaaagaaaaactattttaccaaattat 21324446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 213 - 314
Target Start/End: Complemental strand, 42072190 - 42072089
Alignment:
Q  213 tttttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattctaatcaactactggtttattgtttattaaagaa 312  Q
    |||||||||| ||||||| ||||  ||| ||||||||||| ||| |||||||||||| |||||||  |||||||||| || ||| || |  |||||||||    
T  42072190 tttttacacacatattaagaaatatattaattaaaagaaagagatatgttattttactaaattatcataatcaactattgatttgttttccattaaagaa 42072091  T
Q  313 aa 314  Q
    ||    
T  42072090 aa 42072089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 184 - 267
Target Start/End: Complemental strand, 22857290 - 22857207
Alignment:
Q  184 atccgttttaaaatgaaccttatttaagatttttacacatatattaaaaaattcattgattaaaagaaaaagagatgttatttt 267  Q
    |||||||| ||||| ||  | ||||||  |||||||||| |||||||||||| |||| ||||||||||| || |||||||||||    
T  22857290 atccgtttcaaaataaatgtcatttaaagtttttacacacatattaaaaaatgcattaattaaaagaaagagcgatgttatttt 22857207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 214 - 289
Target Start/End: Complemental strand, 40488032 - 40487957
Alignment:
Q  214 ttttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattctaatcaacta 289  Q
    ||||||| | ||||||| |||| |||| |||||||||||   ||||||||||||| ||||||||| ||||||||||    
T  40488032 ttttacatacatattaagaaatacattaattaaaagaaaggaagatgttattttatcaaattattataatcaacta 40487957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 318 - 398
Target Start/End: Original strand, 8878794 - 8878876
Alignment:
Q  318 tgttgtagcggatgaccggagaatgattaacctgc-aaaataacaaaccg-tgaaacaaacataaggcgtgactacatcactg 398  Q
    ||||||||| |||||||||| |||||||||||||| |||||||||||| | | ||| |||| | |||||||||||| ||||||    
T  8878794 tgttgtagcagatgaccggaaaatgattaacctgcaaaaataacaaactgttcaaataaacctgaggcgtgactacgtcactg 8878876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 263 - 317
Target Start/End: Original strand, 13756867 - 13756921
Alignment:
Q  263 attttaccaaattattctaatcaactactggtttattgtttattaaagaaaaaat 317  Q
    |||||| |||||||| ||||||||||| |||||| || |||||||||||||||||    
T  13756867 attttagcaaattatcctaatcaactattggtttgttttttattaaagaaaaaat 13756921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 243 - 317
Target Start/End: Original strand, 30934784 - 30934858
Alignment:
Q  243 ttaaaagaaaaagagatgttattttaccaaattattctaatcaactactggtttattgtttattaaagaaaaaat 317  Q
    |||||||||| ||||||||||||||| ||||||||  ||||||| || |||||| || || |||||||| |||||    
T  30934784 ttaaaagaaagagagatgttattttatcaaattatcataatcaaatattggtttgtttttcattaaagataaaat 30934858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 263 - 317
Target Start/End: Complemental strand, 39359076 - 39359022
Alignment:
Q  263 attttaccaaattattctaatcaactactggtttattgtttattaaagaaaaaat 317  Q
    ||||||||||||||| ||||||||||| |||||| || || ||||||||||||||    
T  39359076 attttaccaaattatcctaatcaactattggtttgtttttcattaaagaaaaaat 39359022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 263 - 317
Target Start/End: Complemental strand, 44676377 - 44676323
Alignment:
Q  263 attttaccaaattattctaatcaactactggtttattgtttattaaagaaaaaat 317  Q
    ||||||||||||||| ||||||||||| |||||| || || ||||||||||||||    
T  44676377 attttaccaaattatcctaatcaactattggtttgtttttcattaaagaaaaaat 44676323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 263 - 317
Target Start/End: Original strand, 45213716 - 45213770
Alignment:
Q  263 attttaccaaattattctaatcaactactggtttattgtttattaaagaaaaaat 317  Q
    ||||||||||||||||||||||||||| ||||||  | || ||||||||||||||    
T  45213716 attttaccaaattattctaatcaactattggtttgcttttcattaaagaaaaaat 45213770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 263 - 317
Target Start/End: Complemental strand, 51398166 - 51398112
Alignment:
Q  263 attttaccaaattattctaatcaactactggtttattgtttattaaagaaaaaat 317  Q
    ||||||||||||||| ||||||||||| || |||||| || ||||||||||||||    
T  51398166 attttaccaaattatcctaatcaactattgatttatttttcattaaagaaaaaat 51398112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 263 - 316
Target Start/End: Complemental strand, 2458164 - 2458111
Alignment:
Q  263 attttaccaaattattctaatcaactactggtttattgtttattaaagaaaaaa 316  Q
    ||||||||||||||| ||||||||||| ||||||| | || |||||||||||||    
T  2458164 attttaccaaattatcctaatcaactattggtttaattttcattaaagaaaaaa 2458111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 250 - 315
Target Start/End: Complemental strand, 27067774 - 27067710
Alignment:
Q  250 aaaaagagatgttattttaccaaattattctaatcaactactggtttattgtttattaaagaaaaa 315  Q
    ||||| |||||||| ||||||||||||| ||||||||||| |||||| || || ||||||||||||    
T  27067774 aaaaaaagatgttaatttaccaaattatcctaatcaactattggtttgtt-ttcattaaagaaaaa 27067710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 263 - 316
Target Start/End: Original strand, 41287490 - 41287543
Alignment:
Q  263 attttaccaaattattctaatcaactactggtttattgtttattaaagaaaaaa 316  Q
    ||||||||||||||| ||||||||||| |||||| || || |||||||||||||    
T  41287490 attttaccaaattatcctaatcaactattggtttctttttcattaaagaaaaaa 41287543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 224 - 295
Target Start/End: Complemental strand, 19115570 - 19115499
Alignment:
Q  224 atattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattctaatcaactactggtt 295  Q
    ||||||| |||| || |||||||||||||||||   |||||||||||||||||| || || ||||| |||||    
T  19115570 atattaagaaatgcaatgattaaaagaaaaagaatggttattttaccaaattatccttattaactattggtt 19115499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 263 - 317
Target Start/End: Original strand, 23525310 - 23525364
Alignment:
Q  263 attttaccaaattattctaatcaactactggtttattgtttattaaagaaaaaat 317  Q
    |||||||||||||||  |||||||||| |||||| || || ||||||||||||||    
T  23525310 attttaccaaattatcataatcaactattggtttgtttttcattaaagaaaaaat 23525364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 263 - 317
Target Start/End: Complemental strand, 38016530 - 38016476
Alignment:
Q  263 attttaccaaattattctaatcaactactggtttattgtttattaaagaaaaaat 317  Q
    ||||||||||||||| ||||||||||| | |||| || || ||||||||||||||    
T  38016530 attttaccaaattatcctaatcaactattagtttgtttttcattaaagaaaaaat 38016476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 291
Target Start/End: Complemental strand, 4392676 - 4392610
Alignment:
Q  223 tatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattctaatcaactact 291  Q
    |||||||| |||| |||| |||||||||||  |||||||||| |||| ||||||| |||| ||||||||    
T  4392676 tatattaagaaatacattaattaaaagaaa--gagatgttatcttactaaattatcctaaccaactact 4392610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 263 - 316
Target Start/End: Complemental strand, 41850537 - 41850485
Alignment:
Q  263 attttaccaaattattctaatcaactactggtttattgtttattaaagaaaaaa 316  Q
    ||||||||||||||| ||||||||||| |||||| || || |||||||||||||    
T  41850537 attttaccaaattatcctaatcaactattggtttgtt-ttcattaaagaaaaaa 41850485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 213 - 277
Target Start/End: Original strand, 44064410 - 44064474
Alignment:
Q  213 tttttacacatatattaaaaaattcattgattaaaagaaaaagagatg-ttattttaccaaattat 277  Q
    |||||||||| ||||||| |||| || ||||||||||||| ||| ||| |||||||||||||||||    
T  44064410 tttttacacacatattaagaaatgcaatgattaaaagaaagaga-atgattattttaccaaattat 44064474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 193 - 295
Target Start/End: Complemental strand, 45460883 - 45460779
Alignment:
Q  193 aaaatgaaccttatttaagatttttacacatat--attaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattctaatcaactac 290  Q
    ||||||||| |  ||||||||||||||||| ||  ||||| |||| ||  |||||||||||| | |  ||||||||||||||||||| || || |||||     
T  45460883 aaaatgaacgtcgtttaagatttttacacacatgtattaagaaatgcaaagattaaaagaaataaaattgttattttaccaaattatccttattaactat 45460784  T
Q  291 tggtt 295  Q
    |||||    
T  45460783 tggtt 45460779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 263 - 316
Target Start/End: Complemental strand, 45566955 - 45566902
Alignment:
Q  263 attttaccaaattattctaatcaactactggtttattgtttattaaagaaaaaa 316  Q
    ||||||||||||||| ||||||||| | |||||| || || |||||||||||||    
T  45566955 attttaccaaattatcctaatcaaccattggtttgtttttcattaaagaaaaaa 45566902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 263 - 315
Target Start/End: Complemental strand, 36460961 - 36460909
Alignment:
Q  263 attttaccaaattattctaatcaactactggtttattgtttattaaagaaaaa 315  Q
    ||||||||||||||| ||||||||||| |||||| || || || |||||||||    
T  36460961 attttaccaaattatcctaatcaactattggtttgtttttcatcaaagaaaaa 36460909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 205 - 249
Target Start/End: Complemental strand, 50033228 - 50033184
Alignment:
Q  205 atttaagatttttacacatatattaaaaaattcattgattaaaag 249  Q
    ||||||| |||||| ||||||||||||| || |||||||||||||    
T  50033228 atttaaggtttttatacatatattaaaatatgcattgattaaaag 50033184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 65; Significance: 2e-28; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 188 - 316
Target Start/End: Complemental strand, 28289445 - 28289317
Alignment:
Q  188 gttttaaaatgaaccttatttaagatttttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattctaatcaac 287  Q
    |||||||||||||  |  |||||| |||||||||| ||||||| |||| |||| ||||||| ||| |||||||||||||||||||||||| |||||||||    
T  28289445 gttttaaaatgaatgtcgtttaaggtttttacacacatattaataaatacattaattaaaataaagagagatgttattttaccaaattatcctaatcaac 28289346  T
Q  288 tactggtttattgtttattaaagaaaaaa 316  Q
    || |||||| || || |||||||||||||    
T  28289345 tattggtttgtttttcattaaagaaaaaa 28289317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 205 - 316
Target Start/End: Complemental strand, 34012670 - 34012559
Alignment:
Q  205 atttaagatttttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattctaatcaactactggtttattgttta 304  Q
    ||||||| |||||||||||||||||| |||| |||| ||||||||||| | | |||||||||||||||||||| ||||||||||| || ||| || || |    
T  34012670 atttaaggtttttacacatatattaagaaatccattaattaaaagaaagataaatgttattttaccaaattatcctaatcaactattgatttgtttttca 34012571  T
Q  305 ttaaagaaaaaa 316  Q
    ||||||||||||    
T  34012570 ttaaagaaaaaa 34012559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 183 - 317
Target Start/End: Original strand, 47461291 - 47461424
Alignment:
Q  183 catccgttttaaaatgaaccttatttaagatttttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattctaa 282  Q
    ||||||||| ||||||||| |  ||||| ||||||||||| ||||||| |||| |||| ||||||| ||||| |||||| |||||| |||||||| ||||    
T  47461291 catccgtttcaaaatgaacgtcgtttaaaatttttacacacatattaagaaatacattaattaaaaaaaaaa-agatgtcattttatcaaattatcctaa 47461389  T
Q  283 tcaactactggtttattgtttattaaagaaaaaat 317  Q
    ||||||| |||||| || || ||||||||||||||    
T  47461390 tcaactattggtttgtttttcattaaagaaaaaat 47461424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 183 - 316
Target Start/End: Original strand, 6563334 - 6563467
Alignment:
Q  183 catccgttttaaaatgaaccttatttaagatttttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattctaa 282  Q
    ||||||||||||||||||  |  |||||  ||||||| |||||||||| |||| |||| ||||||||||| ||| ||||||||||| |||||||| ||||    
T  6563334 catccgttttaaaatgaatgtcgtttaaattttttacgcatatattaagaaatacattaattaaaagaaagagacatgttattttatcaaattatcctaa 6563433  T
Q  283 tcaactactggtttattgtttattaaagaaaaaa 316  Q
    ||||| | |||||| || || |||||||||||||    
T  6563434 tcaaccattggtttgtttttcattaaagaaaaaa 6563467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 207 - 315
Target Start/End: Original strand, 40753370 - 40753477
Alignment:
Q  207 ttaagatttttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattctaatcaactactggtttattgtttatt 306  Q
    ||||| |||||||||| ||||||| |||| |||| ||||||| ||||| |||| ||||||||||||||||||||||||||||| |||||| || || |||    
T  40753370 ttaaggtttttacacacatattaagaaatgcattaattaaaaaaaaaa-agatattattttaccaaattattctaatcaactattggtttgtttttcatt 40753468  T
Q  307 aaagaaaaa 315  Q
    |||||||||    
T  40753469 aaagaaaaa 40753477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 206 - 315
Target Start/End: Original strand, 24780257 - 24780366
Alignment:
Q  206 tttaagatttttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattctaatcaactactggtttattgtttat 305  Q
    |||||| |||||||  | || |||||||||  ||| |||||||||||||||||||||||||||| ||||||| |||||| |||| ||||||||| || ||    
T  24780257 tttaaggtttttacgtacatgttaaaaaatgtattaattaaaagaaaaagagatgttattttactaaattatcctaatctactattggtttatttttaat 24780356  T
Q  306 taaagaaaaa 315  Q
    ||||||||||    
T  24780357 taaagaaaaa 24780366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 206 - 316
Target Start/End: Complemental strand, 48843767 - 48843655
Alignment:
Q  206 tttaagatttttacacatatattaaaaaattcattgattaaaagaaaaagagatgttatttt--accaaattattctaatcaactactggtttattgttt 303  Q
    |||||| |||||||| | ||||||| |||| || ||||||||||||| ||||||||||||||  |||||||||| ||||||||||| |||||| || ||     
T  48843767 tttaaggtttttacatacatattaagaaatgcactgattaaaagaaagagagatgttattttacaccaaattatcctaatcaactattggtttgtttttc 48843668  T
Q  304 attaaagaaaaaa 316  Q
    |||||||||||||    
T  48843667 attaaagaaaaaa 48843655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 183 - 317
Target Start/End: Complemental strand, 25056015 - 25055883
Alignment:
Q  183 catccgttttaaaatgaaccttatttaagatttttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattctaa 282  Q
    ||||||||||||||||||  || |||||  |||||||||||||||||||||||  ||| ||||||||  |||||||||||||||||||| |||||  |||    
T  25056015 catccgttttaaaatgaatgttgtttaaagtttttacacatatattaaaaaatgtattaattaaaag--aaagagatgttattttaccacattatcataa 25055918  T
Q  283 tcaactactggtttattgtttattaaagaaaaaat 317  Q
    |  |||| || ||| || || ||||||||||||||    
T  25055917 tttactattgatttgtttttcattaaagaaaaaat 25055883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 231 - 317
Target Start/End: Complemental strand, 21819470 - 21819384
Alignment:
Q  231 aaaattcattgattaaaagaaaaagagatgttattttaccaaattattctaatcaactactggtttattgtttattaaagaaaaaat 317  Q
    ||||| |||| ||||||||||| |||||||||||||||||||||||| ||||| ||||| |||||| || || ||||||||||||||    
T  21819470 aaaatacattaattaaaagaaagagagatgttattttaccaaattatcctaataaactattggtttgtttttcattaaagaaaaaat 21819384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 226 - 316
Target Start/End: Complemental strand, 40339651 - 40339561
Alignment:
Q  226 attaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattctaatcaactactggtttattgtttattaaagaaaaaa 316  Q
    ||||| |||| |||| ||||||||||| ||| |||||||||||||||||||| ||||||||||| |||||| || || |||||||||||||    
T  40339651 attaagaaatgcattaattaaaagaaagagaaatgttattttaccaaattatcctaatcaactattggtttgtttttcattaaagaaaaaa 40339561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 205 - 277
Target Start/End: Complemental strand, 4268866 - 4268794
Alignment:
Q  205 atttaagatttttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattat 277  Q
    ||||||| |||||||||| ||||||| |||| |||| ||||||||||| ||||||||||||||||||||||||    
T  4268866 atttaaggtttttacacacatattaagaaatgcattaattaaaagaaagagagatgttattttaccaaattat 4268794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 186 - 277
Target Start/End: Complemental strand, 4268964 - 4268873
Alignment:
Q  186 ccgttttaaaatgaaccttatttaagatttttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattat 277  Q
    |||||||||||||||  |  |||||| |||||||||| ||||||| |||| |||| ||||||||||| | ||||||||||||||||||||||    
T  4268964 ccgttttaaaatgaatgtcgtttaaggtttttacacacatattaagaaatgcattaattaaaagaaagaaagatgttattttaccaaattat 4268873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 206 - 316
Target Start/End: Original strand, 45499762 - 45499873
Alignment:
Q  206 tttaagatttttacacatatattaaaaaattcattgattaaaagaaaaaga-gatgttattttaccaaattattctaatcaactactggtttattgttta 304  Q
    |||||| |||||||||| ||||||| |||| |||| ||||||| ||| ||| |||| |||||||||||||||| ||||| ||||| |||||| || || |    
T  45499762 tttaagctttttacacacatattaagaaatacattaattaaaataaagagatgatgctattttaccaaattatcctaattaactattggtttgtttttca 45499861  T
Q  305 ttaaagaaaaaa 316  Q
    ||||||||||||    
T  45499862 ttaaagaaaaaa 45499873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 224 - 314
Target Start/End: Original strand, 19303351 - 19303441
Alignment:
Q  224 atattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattctaatcaactactggtttattgtttattaaagaaaa 314  Q
    |||||||||||| |||| ||||||||||| ||| |||||||||||| |||||||  |||||||| | ||||||||| || |||||||||||    
T  19303351 atattaaaaaatgcattaattaaaagaaagagaaatgttattttactaaattatcataatcaaccattggtttatttttcattaaagaaaa 19303441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 248 - 316
Target Start/End: Original strand, 33939714 - 33939782
Alignment:
Q  248 agaaaaagagatgttattttaccaaattattctaatcaactactggtttattgtttattaaagaaaaaa 316  Q
    ||||| ||| |||||||||||||||||||||||||||||||  ||||||||| || |||||||||||||    
T  33939714 agaaagagatatgttattttaccaaattattctaatcaactgttggtttatttttcattaaagaaaaaa 33939782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 206 - 317
Target Start/End: Complemental strand, 47187864 - 47187753
Alignment:
Q  206 tttaagatttttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattctaatcaactactggtttattgtttat 305  Q
    |||||| ||||||||   |||||||||||| |||||||||||||||| |||  ||||||||||||||||||| || || || || || | | || |||||    
T  47187864 tttaaggtttttacatgcatattaaaaaatgcattgattaaaagaaagagaattgttattttaccaaattatccttattaattattgatatgttttttat 47187765  T
Q  306 taaagaaaaaat 317  Q
    ||||||||||||    
T  47187764 taaagaaaaaat 47187753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 187 - 288
Target Start/End: Original strand, 25086816 - 25086918
Alignment:
Q  187 cgttttaaaatgaaccttatttaagatttttacacatatattaaaaaatt-cattgattaaaagaaaaagagatgttattttaccaaattattctaatca 285  Q
    ||||||||||||||| |  |||||||||||||  || ||||||||||| | |||| ||||||||||| ||| ||  ||||||| ||||||||||||||||    
T  25086816 cgttttaaaatgaacgtcgtttaagatttttatgcacatattaaaaaaatgcattaattaaaagaaagagaaatagtattttatcaaattattctaatca 25086915  T
Q  286 act 288  Q
    |||    
T  25086916 act 25086918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 244 - 317
Target Start/End: Original strand, 21752088 - 21752161
Alignment:
Q  244 taaaagaaaaagagatgttattttaccaaattattctaatcaactactggtttattgtttattaaagaaaaaat 317  Q
    ||||||||| | | |||||||||||||||||||||||||||||||| |||||| || || |||||||| |||||    
T  21752088 taaaagaaagaaaaatgttattttaccaaattattctaatcaactattggtttgtttttcattaaagataaaat 21752161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 185 - 270
Target Start/End: Complemental strand, 30312768 - 30312683
Alignment:
Q  185 tccgttttaaaatgaaccttatttaagatttttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttacc 270  Q
    ||||| ||||||||||  |  |||||| ||||||||||||||||||||||| |||| ||||||||||| | | |||||||||||||    
T  30312768 tccgtattaaaatgaatgtcgtttaaggtttttacacatatattaaaaaatgcattaattaaaagaaagataaatgttattttacc 30312683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 225 - 317
Target Start/End: Original strand, 29636184 - 29636276
Alignment:
Q  225 tattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattctaatcaactactggtttattgtttattaaagaaaaaat 317  Q
    |||||| |||| |||| || |||||||| ||||||||||||||| |||||||| ||||| || || |||||| || || ||||||||||||||    
T  29636184 tattaagaaatgcattaatcaaaagaaagagagatgttattttatcaaattatcctaataaattattggtttgtttttcattaaagaaaaaat 29636276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 185 - 294
Target Start/End: Complemental strand, 42286131 - 42286022
Alignment:
Q  185 tccgttttaaaatgaaccttatttaagatttttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattctaatc 284  Q
    ||||||||||||||||  |  |||||| |||||||| | ||||||| |||| || ||||||||| ||| |||  ||||||||||||||||||| || ||     
T  42286131 tccgttttaaaatgaatgtcgtttaaggtttttacaaacatattaagaaatgcaatgattaaaataaagagaattgttattttaccaaattatccttatt 42286032  T
Q  285 aactactggt 294  Q
    ||||| ||||    
T  42286031 aactattggt 42286022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 237 - 317
Target Start/End: Complemental strand, 1031336 - 1031256
Alignment:
Q  237 cattgattaaaagaaaaagagatgttattttaccaaattattctaatcaactactggtttattgtttattaaagaaaaaat 317  Q
    |||| ||||||||||| |||||||||||  |||||||||||  |||||||||| || ||  || |||||||||||||||||    
T  1031336 catttattaaaagaaagagagatgttatcataccaaattatcataatcaactattgattctttttttattaaagaaaaaat 1031256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 185 - 289
Target Start/End: Complemental strand, 10476373 - 10476265
Alignment:
Q  185 tccgttttaaaatgaaccttatttaagatttttacacatatattaaaaaattcattgattaa----aagaaaaagagatgttattttaccaaattattct 280  Q
    |||||||||||||  |  || |||||| |||||||||| ||||||| |||| |||| |||||    |||||| ||| ||||||||||| |||||||| ||    
T  10476373 tccgttttaaaatagatgttgtttaaggtttttacacacatattaataaatgcattaattaattaaaagaaagagaaatgttattttatcaaattatcct 10476274  T
Q  281 aatcaacta 289  Q
    |||||||||    
T  10476273 aatcaacta 10476265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 263 - 317
Target Start/End: Complemental strand, 1742147 - 1742093
Alignment:
Q  263 attttaccaaattattctaatcaactactggtttattgtttattaaagaaaaaat 317  Q
    ||||||||||||||| ||||||||||| |||||| || || ||||||||||||||    
T  1742147 attttaccaaattatcctaatcaactattggtttgtttttcattaaagaaaaaat 1742093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 263 - 317
Target Start/End: Complemental strand, 10599519 - 10599465
Alignment:
Q  263 attttaccaaattattctaatcaactactggtttattgtttattaaagaaaaaat 317  Q
    ||||||||||||||| ||||||||||| |||||| || || ||||||||||||||    
T  10599519 attttaccaaattatcctaatcaactattggtttgtttttcattaaagaaaaaat 10599465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 263 - 317
Target Start/End: Complemental strand, 22298152 - 22298098
Alignment:
Q  263 attttaccaaattattctaatcaactactggtttattgtttattaaagaaaaaat 317  Q
    ||||||||||||||| ||||||||||| |||||| || || ||||||||||||||    
T  22298152 attttaccaaattatcctaatcaactattggtttgtttttcattaaagaaaaaat 22298098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 263 - 317
Target Start/End: Complemental strand, 23935577 - 23935523
Alignment:
Q  263 attttaccaaattattctaatcaactactggtttattgtttattaaagaaaaaat 317  Q
    ||||||||||||||| ||||||||||| || ||| || |||||||||||||||||    
T  23935577 attttaccaaattatcctaatcaactattgttttgttttttattaaagaaaaaat 23935523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 263 - 317
Target Start/End: Complemental strand, 24680284 - 24680230
Alignment:
Q  263 attttaccaaattattctaatcaactactggtttattgtttattaaagaaaaaat 317  Q
    ||||||||||||||||||||||||||| || ||| || || ||||||||||||||    
T  24680284 attttaccaaattattctaatcaactattgatttgtttttcattaaagaaaaaat 24680230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 237 - 317
Target Start/End: Complemental strand, 7335462 - 7335381
Alignment:
Q  237 cattgattaaaagaaaaagagatgttattttaccaaattattctaatcaactactggtttattgtt-tattaaagaaaaaat 317  Q
    |||| ||||||||||| | ||||||||||||||||||||||  |||||||||  |||||| || ||  ||||||||||||||    
T  7335462 cattaattaaaagaaagaaagatgttattttaccaaattatcataatcaactgttggtttgtttttaaattaaagaaaaaat 7335381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 263 - 316
Target Start/End: Original strand, 13405122 - 13405175
Alignment:
Q  263 attttaccaaattattctaatcaactactggtttattgtttattaaagaaaaaa 316  Q
    ||||||||||||||| ||||||||||| |||||| || || |||||||||||||    
T  13405122 attttaccaaattatcctaatcaactattggtttgtttttcattaaagaaaaaa 13405175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 215 - 295
Target Start/End: Original strand, 12983102 - 12983182
Alignment:
Q  215 tttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattctaatcaactactggtt 295  Q
    |||||||| ||||||| |||| || ||||||||||||| |||   |||||||||||||||||| || || ||||| |||||    
T  12983102 tttacacacatattaagaaatgcaatgattaaaagaaagagaatggttattttaccaaattatccttattaactattggtt 12983182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 215 - 295
Target Start/End: Complemental strand, 18292528 - 18292448
Alignment:
Q  215 tttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattctaatcaactactggtt 295  Q
    |||||||| ||||||| |||| || ||||||||||||| |||   |||||||||||||||||| || || ||||| |||||    
T  18292528 tttacacacatattaagaaatgcaatgattaaaagaaagagaatggttattttaccaaattatccttattaactattggtt 18292448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 214 - 317
Target Start/End: Original strand, 19104948 - 19105051
Alignment:
Q  214 ttttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattctaatcaactactggtttattgtttattaaagaaa 313  Q
    ||||||||| || |||| ||||  ||| ||||||||||| ||| || |||||||| ||| | || ||||||||||| || ||| || || ||||||||||    
T  19104948 ttttacacacattttaataaatgtattaattaaaagaaagagatatcttattttatcaagtaatcctaatcaactattgatttgttcttcattaaagaaa 19105047  T
Q  314 aaat 317  Q
    ||||    
T  19105048 aaat 19105051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 215 - 277
Target Start/End: Complemental strand, 6747419 - 6747357
Alignment:
Q  215 tttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattat 277  Q
    |||||||| ||||||| |||| || ||||||||||||| |||   ||||||||||||||||||    
T  6747419 tttacacacatattaagaaatgcaatgattaaaagaaagagaatggttattttaccaaattat 6747357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 215 - 277
Target Start/End: Original strand, 12977644 - 12977706
Alignment:
Q  215 tttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattat 277  Q
    |||||||| ||||||| |||| || ||||||||||||| |||   ||||||||||||||||||    
T  12977644 tttacacacatattaagaaatgcaatgattaaaagaaagagaatggttattttaccaaattat 12977706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 263 - 317
Target Start/End: Complemental strand, 35777975 - 35777921
Alignment:
Q  263 attttaccaaattattctaatcaactactggtttattgtttattaaagaaaaaat 317  Q
    ||||||||||||||| ||||| ||||| |||||| || || ||||||||||||||    
T  35777975 attttaccaaattatcctaataaactattggtttgtttttcattaaagaaaaaat 35777921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 206 - 316
Target Start/End: Complemental strand, 37490999 - 37490890
Alignment:
Q  206 tttaagatttttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattctaatcaactactggtttattgtttat 305  Q
    |||||| |||||||||| ||||||| ||||  ||| |||| || |||||||  || ||||||||||||||||  |||| ||||| | |||| || || ||    
T  37490999 tttaaggtttttacacacatattaagaaatgaattaattagaa-aaaaagatgtgatattttaccaaattatcttaataaactattagtttgtttttcat 37490901  T
Q  306 taaagaaaaaa 316  Q
    |||||||||||    
T  37490900 taaagaaaaaa 37490890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 263 - 317
Target Start/End: Complemental strand, 37815880 - 37815826
Alignment:
Q  263 attttaccaaattattctaatcaactactggtttattgtttattaaagaaaaaat 317  Q
    ||||||||||||||| ||||||||||| || ||| || || ||||||||||||||    
T  37815880 attttaccaaattatcctaatcaactattgatttgtttttcattaaagaaaaaat 37815826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 215 - 295
Target Start/End: Complemental strand, 37502512 - 37502432
Alignment:
Q  215 tttacacatatattaaaaaattcattgattaaaagaaaaagagatg-ttattttaccaaattattctaatcaactactggtt 295  Q
    |||||||| ||||||| |||| || ||||||||||||| ||| ||| ||||||||||||||||| || || ||||| |||||    
T  37502512 tttacacacatattaagaaatacaatgattaaaagaaagaga-atgattattttaccaaattatccttattaactattggtt 37502432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 263 - 296
Target Start/End: Complemental strand, 41137884 - 41137851
Alignment:
Q  263 attttaccaaattattctaatcaactactggttt 296  Q
    ||||||||||||||| ||||||||||||||||||    
T  41137884 attttaccaaattatcctaatcaactactggttt 41137851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 229 - 317
Target Start/End: Original strand, 8293031 - 8293118
Alignment:
Q  229 aaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattctaatcaactactggtttattgtttattaaagaaaaaat 317  Q
    ||||||| || | ||||||||||| || |||||||||||||||||||||  | |||||||| || ||| || || |||| |||||||||    
T  8293031 aaaaaatgcagtaattaaaagaaagag-gatgttattttaccaaattatcgtgatcaactattgatttgtttttcattacagaaaaaat 8293118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 263 - 315
Target Start/End: Original strand, 23155457 - 23155509
Alignment:
Q  263 attttaccaaattattctaatcaactactggtttattgtttattaaagaaaaa 315  Q
    ||||||||||||||| ||||||||||| |||||| || || |||||| |||||    
T  23155457 attttaccaaattatcctaatcaactattggtttgtttttcattaaaaaaaaa 23155509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 64; Significance: 8e-28; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 213 - 316
Target Start/End: Original strand, 15750277 - 15750380
Alignment:
Q  213 tttttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattctaatcaactactggtttattgtttattaaagaa 312  Q
    |||||||||| ||||||| |||| |||| ||||||||||| |||||| ||||||||||||||||| ||||||||||| ||||||||| || |||||||||    
T  15750277 tttttacacacatattaagaaatacattaattaaaagaaagagagatattattttaccaaattatcctaatcaactattggtttatttttcattaaagaa 15750376  T
Q  313 aaaa 316  Q
    ||||    
T  15750377 aaaa 15750380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 206 - 317
Target Start/End: Original strand, 29312133 - 29312242
Alignment:
Q  206 tttaagatttttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattctaatcaactactggtttattgtttat 305  Q
    |||||| |||| ||||| | |||||||||| |||| ||||||||||||||||||||||||||||  |||||| ||||||||||| |||||| || || ||    
T  29312133 tttaaggttttcacacacagattaaaaaatacattaattaaaagaaaaagagatgttattttac--aattatactaatcaactattggtttgtttttcat 29312230  T
Q  306 taaagaaaaaat 317  Q
    ||||||||||||    
T  29312231 taaagaaaaaat 29312242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 213 - 317
Target Start/End: Original strand, 40399825 - 40399929
Alignment:
Q  213 tttttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattctaatcaactactggtttattgtttattaaagaa 312  Q
    |||||||||||||||||| |||| |||| ||||||||||| ||| ||||||||||||||||||||  |||||||||| | |||| || || |||||||||    
T  40399825 tttttacacatatattaagaaatgcattaattaaaagaaagagatatgttattttaccaaattatcataatcaactattagtttgtttttcattaaagaa 40399924  T
Q  313 aaaat 317  Q
    |||||    
T  40399925 aaaat 40399929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 206 - 320
Target Start/End: Complemental strand, 9812385 - 9812271
Alignment:
Q  206 tttaagatttttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattctaatcaactactggtttattgtttat 305  Q
    |||||| |||||| ||| ||||||| |||| || | ||||||| ||| | |||||||||||||||||||||| ||||||||||| |||||| || || ||    
T  9812385 tttaaggtttttatacacatattaagaaatgcactaattaaaataaagaaagatgttattttaccaaattatcctaatcaactattggtttgtttttcat 9812286  T
Q  306 taaagaaaaaattgt 320  Q
    |||||||||||||||    
T  9812285 taaagaaaaaattgt 9812271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 206 - 316
Target Start/End: Complemental strand, 15227782 - 15227672
Alignment:
Q  206 tttaagatttttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattctaatcaactactggtttattgtttat 305  Q
    ||||||||||||||||  ||||||| |||| |||| ||||||||||||| ||||||||||||| |||||||||||||||||  | | |||| || || ||    
T  15227782 tttaagatttttacacgcatattaagaaatgcattaattaaaagaaaaaaagatgttattttatcaaattattctaatcaatcattagtttgtttttcat 15227683  T
Q  306 taaagaaaaaa 316  Q
    |||||||||||    
T  15227682 taaagaaaaaa 15227672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 186 - 316
Target Start/End: Original strand, 5295327 - 5295456
Alignment:
Q  186 ccgttttaaaatgaaccttatttaagatttttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattctaatca 285  Q
    |||||||||||||||  || |||||  |||||||||| ||||||| ||||  ||||||||||||||| ||| ||  |||||||||||||||| |||||||    
T  5295327 ccgttttaaaatgaatgttgtttaaagtttttacacacatattaagaaatgtattgattaaaagaaagagatat-atattttaccaaattatcctaatca 5295425  T
Q  286 actactggtttattgtttattaaagaaaaaa 316  Q
    |||| || ||| || |||||||| |||||||    
T  5295426 actattgctttgttttttattaatgaaaaaa 5295456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 185 - 317
Target Start/End: Original strand, 13367870 - 13368000
Alignment:
Q  185 tccgttttaaaatgaaccttatttaagatttttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattctaatc 284  Q
    ||||||| ||||| ||  || |||||| |||||||||| ||||||| ||||  ||| ||||||| || ||||  ||||||||||||| ||||| ||||||    
T  13367870 tccgtttcaaaataaatattgtttaaggtttttacacacatattaagaaatgtattaattaaaaaaagaaga--tgttattttaccatattatcctaatc 13367967  T
Q  285 aactactggtttattgtttattaaagaaaaaat 317  Q
    || |||||||||||| || ||||||||||||||    
T  13367968 aattactggtttatttttcattaaagaaaaaat 13368000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 217 - 317
Target Start/End: Original strand, 14234167 - 14234267
Alignment:
Q  217 tacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattctaatcaactactggtttattgtttattaaagaaaaaa 316  Q
    |||||| |||||||||||| |||| |||||| |||| ||| |||||||||| ||||||||| ||||||||||| |||||| || ||  ||||||||||||    
T  14234167 tacacaaatattaaaaaatacattaattaaacgaaagagatatgttattttgccaaattatcctaatcaactattggtttgtttttcgttaaagaaaaaa 14234266  T
Q  317 t 317  Q
    |    
T  14234267 t 14234267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 213 - 316
Target Start/End: Original strand, 2375794 - 2375897
Alignment:
Q  213 tttttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattctaatcaactactggtttattgtttattaaagaa 312  Q
    |||||||||||||||||| |||| |||| ||||||||||| ||||||||||||||| |||||| |  |||||||  | |||||| || || |||||||||    
T  2375794 tttttacacatatattaataaatgcattaattaaaagaaagagagatgttattttatcaaattgtcttaatcaatcattggtttgtttttcattaaagaa 2375893  T
Q  313 aaaa 316  Q
    ||||    
T  2375894 aaaa 2375897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 206 - 317
Target Start/End: Original strand, 43969993 - 43970103
Alignment:
Q  206 tttaagatttttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattctaatcaactactggtttattgtttat 305  Q
    ||||||||||||| ||| ||| ||| |||| |||| ||||||||||||| | ||||||||||| |||||||| ||||||||||| || ||| |  |||||    
T  43969993 tttaagatttttatacacatactaagaaatgcattaattaaaagaaaaaaa-atgttattttatcaaattatcctaatcaactattgatttgtcttttat 43970091  T
Q  306 taaagaaaaaat 317  Q
    ||||||||||||    
T  43970092 taaagaaaaaat 43970103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 188 - 317
Target Start/End: Complemental strand, 6374641 - 6374514
Alignment:
Q  188 gttttaaaatgaaccttatttaagatttttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattctaatcaac 287  Q
    |||||||||||||| |  |||||| |||||| | ||||||||  |||| |||| ||||||| |||||||  |||||||||||||||||||  ||||||||    
T  6374641 gttttaaaatgaacgtcgtttaaggtttttataaatatattaggaaatacattaattaaaaaaaaaaga--tgttattttaccaaattatcataatcaac 6374544  T
Q  288 tactggtttattgtttattaaagaaaaaat 317  Q
    || | |||| || || ||||||||||||||    
T  6374543 tattagtttgtttttcattaaagaaaaaat 6374514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 213 - 315
Target Start/End: Original strand, 34796629 - 34796731
Alignment:
Q  213 tttttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattctaatcaactactggtttattgtttattaaagaa 312  Q
    |||||||||| || |||| |||| |||| ||||||||||| ||| ||||||||||| |||||||| ||||||||||| |||||| || || |||||| ||    
T  34796629 tttttacacacatgttaagaaatgcattaattaaaagaaagagatatgttattttatcaaattatcctaatcaactattggtttgtttttcattaaaaaa 34796728  T
Q  313 aaa 315  Q
    |||    
T  34796729 aaa 34796731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 181 - 317
Target Start/End: Complemental strand, 41679546 - 41679413
Alignment:
Q  181 ttcatccgttttaaaatgaaccttatttaagatttttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattct 280  Q
    ||||||||||||||||| ||  |  ||||||||||| ||||| |||  || |||| |||| ||||||||||| |||| |||||||||||||||||||  |    
T  41679546 ttcatccgttttaaaataaatgtcgtttaagatttt-acacacata--aagaaatgcattaattaaaagaaagagaggtgttattttaccaaattatcat 41679450  T
Q  281 aatcaactactggtttattgtttattaaagaaaaaat 317  Q
    ||||||||| ||||||  | || ||||||||||||||    
T  41679449 aatcaactattggtttgattttcattaaagaaaaaat 41679413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 213 - 317
Target Start/End: Complemental strand, 42179300 - 42179196
Alignment:
Q  213 tttttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattctaatcaactactggtttattgtttattaaagaa 312  Q
    |||||||||| |||||||||||| |||| ||||||||||| || |||| |||||||| |||||||  |||| ||||| | |||| || || |||||||||    
T  42179300 tttttacacacatattaaaaaatacattaattaaaagaaagagtgatgatattttactaaattatcataattaactattagtttgtttttcattaaagaa 42179201  T
Q  313 aaaat 317  Q
    |||||    
T  42179200 aaaat 42179196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 206 - 277
Target Start/End: Original strand, 6115945 - 6116016
Alignment:
Q  206 tttaagatttttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattat 277  Q
    |||||| |||||||||| |||||||||||| |||| |||||||||||  |||||||||||||||||| ||||    
T  6115945 tttaaggtttttacacacatattaaaaaatgcattaattaaaagaaagggagatgttattttaccaacttat 6116016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 225 - 317
Target Start/End: Complemental strand, 13496431 - 13496339
Alignment:
Q  225 tattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattctaatcaactactggtttattgtttattaaagaaaaaat 317  Q
    |||||| |||| |||| ||||||||||| | |||||||||||||||||||||| |||||||| || |||||| || ||  || ||||||||||    
T  13496431 tattaagaaatgcattaattaaaagaaagaaagatgttattttaccaaattatcctaatcaattattggtttgtttttctttcaagaaaaaat 13496339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 213 - 317
Target Start/End: Complemental strand, 34156740 - 34156636
Alignment:
Q  213 tttttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattctaatcaactactggtttattgtttattaaagaa 312  Q
    ||||||||  |||||||  |||| |||| ||||||||||| |||| |||||||||| ||||||||  |||||||| | |||||| || || |||||||||    
T  34156740 tttttacatgtatattatgaaatgcattaattaaaagaaatagagctgttattttatcaaattatcataatcaaccattggtttgtttttcattaaagaa 34156641  T
Q  313 aaaat 317  Q
    |||||    
T  34156640 aaaat 34156636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 245 - 317
Target Start/End: Original strand, 45358874 - 45358946
Alignment:
Q  245 aaaagaaaaagagatgttattttaccaaattattctaatcaactactggtttattgtttattaaagaaaaaat 317  Q
    |||| ||||||||||||||||||||| ||||||| |||||||||| | |||| || || ||||||||||||||    
T  45358874 aaaataaaaagagatgttattttaccgaattattttaatcaactattagtttgtttttcattaaagaaaaaat 45358946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 207 - 317
Target Start/End: Original strand, 31233886 - 31233991
Alignment:
Q  207 ttaagatttttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattctaatcaactactggtttattgtttatt 306  Q
    |||||||||||||||| ||||||| |||| |||| ||||||| |||||     |||| ||||| |||| || ||||||||||| ||||||||| || |||    
T  31233886 ttaagatttttacacacatattaagaaatacattaattaaaaaaaaaa-----gttactttacaaaatcatcctaatcaactattggtttatttttcatt 31233980  T
Q  307 aaagaaaaaat 317  Q
    |||| ||||||    
T  31233981 aaaggaaaaat 31233991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 263 - 316
Target Start/End: Complemental strand, 17921113 - 17921060
Alignment:
Q  263 attttaccaaattattctaatcaactactggtttattgtttattaaagaaaaaa 316  Q
    ||||||||||||||||||||||||||| |||||| || || |||||||||||||    
T  17921113 attttaccaaattattctaatcaactattggtttgtttttcattaaagaaaaaa 17921060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 247 - 314
Target Start/End: Complemental strand, 515048 - 514981
Alignment:
Q  247 aagaaaaagagatgttattttaccaaattattctaatcaactactggtttattgtttattaaagaaaa 314  Q
    |||||| ||||||||||||||| |||||||| ||||||||||| |||||| || || |||| ||||||    
T  515048 aagaaagagagatgttattttagcaaattatcctaatcaactattggtttgtttttcattatagaaaa 514981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 263 - 317
Target Start/End: Original strand, 29025746 - 29025800
Alignment:
Q  263 attttaccaaattattctaatcaactactggtttattgtttattaaagaaaaaat 317  Q
    ||||||||||||||| ||||||||||| || ||| || |||||||||||||||||    
T  29025746 attttaccaaattatcctaatcaactattgatttgttttttattaaagaaaaaat 29025800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 263 - 317
Target Start/End: Original strand, 39698663 - 39698717
Alignment:
Q  263 attttaccaaattattctaatcaactactggtttattgtttattaaagaaaaaat 317  Q
    ||||||||||||||| ||||||||||| |||||| || || ||||||||||||||    
T  39698663 attttaccaaattatcctaatcaactattggtttgtttttcattaaagaaaaaat 39698717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 263 - 317
Target Start/End: Complemental strand, 40228730 - 40228676
Alignment:
Q  263 attttaccaaattattctaatcaactactggtttattgtttattaaagaaaaaat 317  Q
    ||||||||||||||| ||||||||||| |||||| || || ||||||||||||||    
T  40228730 attttaccaaattatcctaatcaactattggtttgtttttcattaaagaaaaaat 40228676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 263 - 315
Target Start/End: Original strand, 4760556 - 4760608
Alignment:
Q  263 attttaccaaattattctaatcaactactggtttattgtttattaaagaaaaa 315  Q
    ||||||||||||||| ||||||||||| |||||| || || ||||||||||||    
T  4760556 attttaccaaattatcctaatcaactattggtttgtttttcattaaagaaaaa 4760608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 215 - 295
Target Start/End: Original strand, 15160406 - 15160486
Alignment:
Q  215 tttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattctaatcaactactggtt 295  Q
    |||||||| ||||||| |||| || ||||||||||||| |||   |||||||||||||||||| || || ||||| |||||    
T  15160406 tttacacacatattaagaaatgcaatgattaaaagaaagagaatggttattttaccaaattatccttattaactattggtt 15160486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 263 - 317
Target Start/End: Complemental strand, 7839614 - 7839560
Alignment:
Q  263 attttaccaaattattctaatcaactactggtttattgtttattaaagaaaaaat 317  Q
    |||||||| ||||||  |||||||||| ||||||||| || ||||||||||||||    
T  7839614 attttaccgaattatcttaatcaactattggtttatttttcattaaagaaaaaat 7839560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 263 - 317
Target Start/End: Original strand, 9880498 - 9880552
Alignment:
Q  263 attttaccaaattattctaatcaactactggtttattgtttattaaagaaaaaat 317  Q
    ||||||| ||||||| ||||||||||| || |||||| || ||||||||||||||    
T  9880498 attttacgaaattatcctaatcaactattgatttatttttcattaaagaaaaaat 9880552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 263 - 317
Target Start/End: Original strand, 36669791 - 36669845
Alignment:
Q  263 attttaccaaattattctaatcaactactggtttattgtttattaaagaaaaaat 317  Q
    ||||||||||||||| ||||||||||| | |||| || || ||||||||||||||    
T  36669791 attttaccaaattatcctaatcaactattagtttgtttttcattaaagaaaaaat 36669845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 263 - 317
Target Start/End: Complemental strand, 43448872 - 43448818
Alignment:
Q  263 attttaccaaattattctaatcaactactggtttattgtttattaaagaaaaaat 317  Q
    ||||||||||||||| ||||||||||| | |||| || || ||||||||||||||    
T  43448872 attttaccaaattatcctaatcaactattagtttgtttttcattaaagaaaaaat 43448818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 215 - 295
Target Start/End: Original strand, 396174 - 396254
Alignment:
Q  215 tttacacatatattaaaaaattcattgattaaaagaaaaagagatg-ttattttaccaaattattctaatcaactactggtt 295  Q
    |||||||| ||||||| |||| || ||||||||||||| ||| ||| ||||||||||||||||| || || ||||| |||||    
T  396174 tttacacacatattaagaaatgcaatgattaaaagaaagaga-atgattattttaccaaattatccttattaactattggtt 396254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 215 - 295
Target Start/End: Original strand, 39765820 - 39765900
Alignment:
Q  215 tttacacatatattaaaaaattcattgattaaaagaaaaagagatg-ttattttaccaaattattctaatcaactactggtt 295  Q
    |||||||| ||||||| |||| || ||||||||||||| ||| ||| ||||||||||||||||| || || ||||| |||||    
T  39765820 tttacacacatattaagaaatacaatgattaaaagaaagaga-atgcttattttaccaaattatccttattaactattggtt 39765900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 265 - 317
Target Start/End: Complemental strand, 44713688 - 44713636
Alignment:
Q  265 tttaccaaattattctaatcaactactggtttattgtttattaaagaaaaaat 317  Q
    |||||||||||||  |||||||||| | ||||||| || ||||||||||||||    
T  44713688 tttaccaaattatcataatcaactattagtttatttttcattaaagaaaaaat 44713636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 61; Significance: 5e-26; HSPs: 1)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 213 - 317
Target Start/End: Original strand, 9902 - 10006
Alignment:
Q  213 tttttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattctaatcaactactggtttattgtttattaaagaa 312  Q
    ||||||||||||||||||||||| |||| ||||||||||||| ||||||||||||||||||||||  |||||||||| | |||| || ||  ||||||||    
T  9902 tttttacacatatattaaaaaatgcattaattaaaagaaaaaaagatgttattttaccaaattatcttaatcaactattagtttgtttttccttaaagaa 10001  T
Q  313 aaaat 317  Q
    |||||    
T  10002 aaaat 10006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 61; Significance: 5e-26; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 213 - 317
Target Start/End: Complemental strand, 30261464 - 30261360
Alignment:
Q  213 tttttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattctaatcaactactggtttattgtttattaaagaa 312  Q
    |||||||||| ||||||| |||| |||| ||| ||||||| ||||||||||||||||||||||||| |||||||||| |||||| || || |||||||||    
T  30261464 tttttacacacatattaagaaatacattaatttaaagaaagagagatgttattttaccaaattattttaatcaactattggtttgtttttcattaaagaa 30261365  T
Q  313 aaaat 317  Q
    |||||    
T  30261364 aaaat 30261360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 179 - 289
Target Start/End: Original strand, 10573071 - 10573182
Alignment:
Q  179 acttcatccgttttaaaatgaaccttatttaagatttttacacatatattaaaaaatt-cattgattaaaagaaaaagagatgttattttaccaaattat 277  Q
    |||||||||| |||||||||||  |  ||||||||||||||||| ||||||||||| | ||||  |||||||||| ||||||||||||||||||||||||    
T  10573071 acttcatccgctttaaaatgaatgtcgtttaagatttttacacacatattaaaaaaatacattatttaaaagaaagagagatgttattttaccaaattat 10573170  T
Q  278 tctaatcaacta 289  Q
     |||||||||||    
T  10573171 cctaatcaacta 10573182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 207 - 289
Target Start/End: Original strand, 47458332 - 47458414
Alignment:
Q  207 ttaagatttttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattctaatcaacta 289  Q
    |||||||||||||||| |||||||||||| |||| ||||||||||| | |||||||||||||||||||||| |||||||||||    
T  47458332 ttaagatttttacacacatattaaaaaatacattaattaaaagaaagacagatgttattttaccaaattatcctaatcaacta 47458414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 185 - 317
Target Start/End: Original strand, 19451128 - 19451260
Alignment:
Q  185 tccgttttaaaatgaaccttatttaagatttttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattctaatc 284  Q
    ||||||| ||||||||  || |||||  |||||||||| ||||||| |||| |||| ||||||||||| |||||||||||||||||||| ||  ||||||    
T  19451128 tccgtttcaaaatgaatgttgtttaaagtttttacacacatattaagaaatgcattaattaaaagaaagagagatgttattttaccaaaatagcctaatc 19451227  T
Q  285 aactactggtttattgtttattaaagaaaaaat 317  Q
    || || |||||| || || ||||||||||||||    
T  19451228 aattattggtttgtttttcattaaagaaaaaat 19451260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 206 - 289
Target Start/End: Original strand, 620120 - 620203
Alignment:
Q  206 tttaagatttttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattctaatcaacta 289  Q
    |||||| |||||||||||||||||||||||  ||| ||||||||||  ||||||||||||||||||||||||| ||||||||||    
T  620120 tttaaggtttttacacatatattaaaaaatatatttattaaaagaaggagagatgttattttaccaaattattttaatcaacta 620203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 185 - 316
Target Start/End: Complemental strand, 47817972 - 47817841
Alignment:
Q  185 tccgttttaaaatgaaccttatttaagatttttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattctaatc 284  Q
    ||||||| ||||||||  |  |||||| |||||| ||| ||||||| |||| |||| ||||||||||| ||||||||||||||||||| ||||  |||||    
T  47817972 tccgtttcaaaatgaatgtcgtttaagttttttatacacatattaagaaatgcattaattaaaagaaagagagatgttattttaccaatttatcataatc 47817873  T
Q  285 aactactggtttattgtttattaaagaaaaaa 316  Q
    ||||| |||||| || || |||||||||||||    
T  47817872 aactattggtttgtttttcattaaagaaaaaa 47817841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 187 - 317
Target Start/End: Original strand, 6991188 - 6991318
Alignment:
Q  187 cgttttaaaatgaaccttatttaagatttttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattctaatcaa 286  Q
    ||||||||||||||  |  || ||| |||||| ||| ||||||| |||| |||| ||||||||||| ||| || ||||| ||||||||||| ||| ||||    
T  6991188 cgttttaaaatgaatttcgttcaaggtttttatacacatattaagaaatgcattaattaaaagaaagagatattttattataccaaattatcctagtcaa 6991287  T
Q  287 ctactggtttattgtttattaaagaaaaaat 317  Q
    ||| ||||||||| |||||||||||||||||    
T  6991288 ctattggtttattttttattaaagaaaaaat 6991318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 189 - 317
Target Start/End: Complemental strand, 41496434 - 41496306
Alignment:
Q  189 ttttaaaatgaaccttatttaagatttttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattctaatcaact 288  Q
    ||||||||||||  |  |||||| |||||||||| ||||||||||||  ||| ||||||||||| ||| ||||||||| |||||||||| ||||||||||    
T  41496434 ttttaaaatgaatatcgtttaaggtttttacacacatattaaaaaatgtattaattaaaagaaatagaaatgttatttcaccaaattatcctaatcaact 41496335  T
Q  289 actggtttattgtttattaaagaaaaaat 317  Q
    | | |||| || |||||| ||||| ||||    
T  41496334 atttgtttgttttttattgaagaataaat 41496306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 183 - 316
Target Start/End: Complemental strand, 44061229 - 44061096
Alignment:
Q  183 catccgttttaaaatgaaccttatttaagatttttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattctaa 282  Q
    ||||||||||||||||||  |  |||||| |||||| |||  |||||| |||| |||| ||||| ||||||| |||||||||||||| |||||||  |||    
T  44061229 catccgttttaaaatgaatgtcgtttaaggtttttatacacgtattaagaaatgcattaattaagagaaaaatagatgttattttactaaattatcataa 44061130  T
Q  283 tcaactactggtttattgtttattaaagaaaaaa 316  Q
    ||||||| |||||| || || |||||| ||||||    
T  44061129 tcaactattggtttgtttttcattaaataaaaaa 44061096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 185 - 316
Target Start/End: Original strand, 34413470 - 34413601
Alignment:
Q  185 tccgttttaaaatgaaccttatttaagatttttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattctaatc 284  Q
    ||||||||||||||||| |  |||||  |||||| ||| | ||||| |||| | || ||||||||||| ||| |||||||||||| ||||||| ||||||    
T  34413470 tccgttttaaaatgaacgtcgtttaatgtttttatacacaaattaagaaatgcgttaattaaaagaaagagaaatgttattttactaaattatgctaatc 34413569  T
Q  285 aactactggtttattgtttattaaagaaaaaa 316  Q
    ||||| |||||  || || |||||||||||||    
T  34413570 aactattggttcttttttcattaaagaaaaaa 34413601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 183 - 277
Target Start/End: Original strand, 38510177 - 38510271
Alignment:
Q  183 catccgttttaaaatgaaccttatttaagatttttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattat 277  Q
    |||||||||||||||||   |  ||| |||| |||||||| |||||||||||| || ||||||||||||||||| | ||||||||||||||||||    
T  38510177 catccgttttaaaatgagtgtcgttttagatctttacacacatattaaaaaatgcaatgattaaaagaaaaagaaaggttattttaccaaattat 38510271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 185 - 317
Target Start/End: Complemental strand, 52162337 - 52162205
Alignment:
Q  185 tccgttttaaaatgaaccttatttaagatttttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattctaatc 284  Q
    ||||||||||||||||  | |||| |   |||||| | |||||||| |||| ||||  |||||||||  ||||||||||||||||||||||||  |||||    
T  52162337 tccgttttaaaatgaatgtcattttatgcttttacgcgtatattaagaaatgcattagttaaaagaactagagatgttattttaccaaattatcttaatc 52162238  T
Q  285 aactactggtttattgtttattaaagaaaaaat 317  Q
    || || |||||| || || ||||||||||||||    
T  52162237 aaatattggtttgtttttcattaaagaaaaaat 52162205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 244 - 317
Target Start/End: Original strand, 46392045 - 46392118
Alignment:
Q  244 taaaagaaaaagagatgttattttaccaaattattctaatcaactactggtttattgtttattaaagaaaaaat 317  Q
    ||||||||||||| |||| ||||||||||||||| ||||||||||| |||||| || | ||||||| |||||||    
T  46392045 taaaagaaaaagaaatgtaattttaccaaattatcctaatcaactattggtttgttttctattaaataaaaaat 46392118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 206 - 286
Target Start/End: Original strand, 25123567 - 25123647
Alignment:
Q  206 tttaagatttttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattctaatcaa 286  Q
    ||||||||||||||| | |||||||||||| |||| |||||||| || ||| || ||||||||| ||||||| ||||||||    
T  25123567 tttaagatttttacataaatattaaaaaatacattaattaaaagcaagagatatattattttactaaattatcctaatcaa 25123647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 263 - 317
Target Start/End: Original strand, 41920310 - 41920364
Alignment:
Q  263 attttaccaaattattctaatcaactactggtttattgtttattaaagaaaaaat 317  Q
    ||||||||||||||||||||||||||| |||||| || || ||||||||||||||    
T  41920310 attttaccaaattattctaatcaactattggtttgtttttcattaaagaaaaaat 41920364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 206 - 311
Target Start/End: Complemental strand, 44651100 - 44650995
Alignment:
Q  206 tttaagatttttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattctaatcaactactggtttattgtttat 305  Q
    ||||||||||||| ||| ||||| | |||| |||| ||||||||||| | | ||||||||||||||||||||  |||||  ||| | ||||||| || ||    
T  44651100 tttaagatttttatacacatatttagaaatgcattaattaaaagaaagatatatgttattttaccaaattatcataatcggctattagtttatttttcat 44651001  T
Q  306 taaaga 311  Q
    ||||||    
T  44651000 taaaga 44650995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 213 - 277
Target Start/End: Complemental strand, 11364431 - 11364367
Alignment:
Q  213 tttttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattat 277  Q
    |||||| ||| |||||||||||| |||| |||||||||||  || ||||||||||||||||||||    
T  11364431 tttttatacacatattaaaaaatgcattaattaaaagaaagggatatgttattttaccaaattat 11364367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 245 - 316
Target Start/End: Complemental strand, 8971216 - 8971145
Alignment:
Q  245 aaaagaaaaagagatgttattttaccaaattattctaatcaactactggtttattgtttattaaagaaaaaa 316  Q
    |||| |||||||||| |||||||||||||||||  |||| ||||| |||||| || || |||||||||||||    
T  8971216 aaaaaaaaaagagattttattttaccaaattatcttaataaactattggtttgtttttcattaaagaaaaaa 8971145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 263 - 314
Target Start/End: Original strand, 40345348 - 40345399
Alignment:
Q  263 attttaccaaattattctaatcaactactggtttattgtttattaaagaaaa 314  Q
    ||||||||||||||| ||||||||||| |||||| || ||||||||||||||    
T  40345348 attttaccaaattatcctaatcaactattggtttgttttttattaaagaaaa 40345399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 206 - 289
Target Start/End: Original strand, 44868197 - 44868279
Alignment:
Q  206 tttaagatttttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattctaatcaacta 289  Q
    |||||| |||||||||| ||||||| ||||  ||| ||||||| |||||||  ||||||||||||||||| | |||||||||||    
T  44868197 tttaaggtttttacacacatattaagaaatatattaattaaaa-aaaaagaattgttattttaccaaattgtcctaatcaacta 44868279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 263 - 317
Target Start/End: Complemental strand, 1819718 - 1819664
Alignment:
Q  263 attttaccaaattattctaatcaactactggtttattgtttattaaagaaaaaat 317  Q
    ||||||||||||||| ||||||||||| || |||||| || ||||||||||||||    
T  1819718 attttaccaaattatcctaatcaactattgatttatttttcattaaagaaaaaat 1819664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 215 - 277
Target Start/End: Original strand, 7905960 - 7906022
Alignment:
Q  215 tttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattat 277  Q
    |||||||| ||||||| |||| || ||||||||||||| |||  |||||||||||||||||||    
T  7905960 tttacacacatattaagaaatgcaatgattaaaagaaagagaattgttattttaccaaattat 7906022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 263 - 317
Target Start/End: Complemental strand, 19878804 - 19878750
Alignment:
Q  263 attttaccaaattattctaatcaactactggtttattgtttattaaagaaaaaat 317  Q
    ||||||||||||||| ||||||||||| |||||| || || ||||||||||||||    
T  19878804 attttaccaaattatcctaatcaactattggtttgtttttcattaaagaaaaaat 19878750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 263 - 317
Target Start/End: Original strand, 44571866 - 44571920
Alignment:
Q  263 attttaccaaattattctaatcaactactggtttattgtttattaaagaaaaaat 317  Q
    |||||||||||||||  |||||||||| ||||||||| || ||||||||||||||    
T  44571866 attttaccaaattatcttaatcaactattggtttatttttcattaaagaaaaaat 44571920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 263 - 317
Target Start/End: Original strand, 45043589 - 45043643
Alignment:
Q  263 attttaccaaattattctaatcaactactggtttattgtttattaaagaaaaaat 317  Q
    ||||||||||||||| ||||||||||| |||||| || || ||||||||||||||    
T  45043589 attttaccaaattatcctaatcaactattggtttgtttttcattaaagaaaaaat 45043643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 263 - 317
Target Start/End: Original strand, 52957791 - 52957845
Alignment:
Q  263 attttaccaaattattctaatcaactactggtttattgtttattaaagaaaaaat 317  Q
    ||||||||||||||| ||||||||||| |||||| || || ||||||||||||||    
T  52957791 attttaccaaattatcctaatcaactattggtttgtttttcattaaagaaaaaat 52957845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 263 - 316
Target Start/End: Complemental strand, 24941036 - 24940983
Alignment:
Q  263 attttaccaaattattctaatcaactactggtttattgtttattaaagaaaaaa 316  Q
    ||||||||||||||| ||||||||||| |||||| || || |||||||||||||    
T  24941036 attttaccaaattatcctaatcaactattggtttgtttttcattaaagaaaaaa 24940983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 215 - 280
Target Start/End: Complemental strand, 28308919 - 28308854
Alignment:
Q  215 tttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattct 280  Q
    |||||||||||||||| |||| || ||||||||||||| | | || |||||||| |||||||||||    
T  28308919 tttacacatatattaagaaatgcaatgattaaaagaaagataaatattattttatcaaattattct 28308854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 263 - 315
Target Start/End: Complemental strand, 29370759 - 29370707
Alignment:
Q  263 attttaccaaattattctaatcaactactggtttattgtttattaaagaaaaa 315  Q
    ||||||||||||||| ||||||||||| |||||| || || ||||||||||||    
T  29370759 attttaccaaattatcctaatcaactattggtttgtttttcattaaagaaaaa 29370707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 193 - 317
Target Start/End: Complemental strand, 50203299 - 50203175
Alignment:
Q  193 aaaatgaaccttatttaagatttttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattctaatcaactactg 292  Q
    ||||||||  || |||||| ||||||| || ||||||| ||||   ||  |||||||||| | | ||||||||| ||||||||||  |||||||||| ||    
T  50203299 aaaatgaatgttgtttaaggtttttacgcacatattaagaaatgtgttagttaaaagaaagaaatatgttatttcaccaaattatcataatcaactattg 50203200  T
Q  293 gtttattgtttattaaagaaaaaat 317  Q
     ||| || || ||||||||||||||    
T  50203199 atttgtttttcattaaagaaaaaat 50203175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 263 - 317
Target Start/End: Complemental strand, 37654566 - 37654511
Alignment:
Q  263 attttaccaaattattctaatcaactactggtttattgttt-attaaagaaaaaat 317  Q
    ||||||||||||||| ||||||||||| |||||| || ||| ||||||||||||||    
T  37654566 attttaccaaattatcctaatcaactattggtttgttttttcattaaagaaaaaat 37654511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 224 - 295
Target Start/End: Original strand, 51733467 - 51733538
Alignment:
Q  224 atattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattctaatcaactactggtt 295  Q
    ||||||| |||| || ||||||||||||| |||   ||||||||||||||||||||| || ||||| |||||    
T  51733467 atattaagaaatgcaatgattaaaagaaagagaatggttattttaccaaattattcttattaactattggtt 51733538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 263 - 317
Target Start/End: Original strand, 2728399 - 2728453
Alignment:
Q  263 attttaccaaattattctaatcaactactggtttattgtttattaaagaaaaaat 317  Q
    ||||||||||||||| ||||||||||| |||| | || || ||||||||||||||    
T  2728399 attttaccaaattatcctaatcaactattggtgtgtttttcattaaagaaaaaat 2728453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 263 - 317
Target Start/End: Complemental strand, 20448195 - 20448141
Alignment:
Q  263 attttaccaaattattctaatcaactactggtttattgtttattaaagaaaaaat 317  Q
    ||||||||||||||| ||||||||||| ||||||  | || ||||||||||||||    
T  20448195 attttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaat 20448141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 258 - 316
Target Start/End: Original strand, 30780016 - 30780074
Alignment:
Q  258 atgttattttaccaaattattctaatcaactactggtttattgtttattaaagaaaaaa 316  Q
    |||||||||||| ||||||| ||||||||||| || ||| || || |||||||||||||    
T  30780016 atgttattttactaaattatcctaatcaactattgatttgtttttcattaaagaaaaaa 30780074  T

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Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 263 - 317
Target Start/End: Complemental strand, 42605728 - 42605674
Alignment:
Q  263 attttaccaaattattctaatcaactactggtttattgtttattaaagaaaaaat 317  Q
    |||||||||||||||  |||||||||| |||||| || || ||||||||||||||    
T  42605728 attttaccaaattatcttaatcaactattggtttgtttttcattaaagaaaaaat 42605674  T

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Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 242 - 316
Target Start/End: Complemental strand, 45839814 - 45839740
Alignment:
Q  242 attaaaagaaaaagagatgttattttaccaaattattctaatcaactactggtttattgtttattaaagaaaaaa 316  Q
    ||||||||||| ||| |  ||||||||||||||||| ||||||||| | || ||| || || |||||||||||||    
T  45839814 attaaaagaaagagaaaaattattttaccaaattatcctaatcaacaattgatttgtttttcattaaagaaaaaa 45839740  T

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Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 263 - 317
Target Start/End: Complemental strand, 49089619 - 49089565
Alignment:
Q  263 attttaccaaattattctaatcaactactggtttattgtttattaaagaaaaaat 317  Q
    ||||||| ||||||| ||||||||||| |||||| || || ||||||||||||||    
T  49089619 attttactaaattatcctaatcaactattggtttgtttttcattaaagaaaaaat 49089565  T

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Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 263 - 317
Target Start/End: Complemental strand, 52254004 - 52253950
Alignment:
Q  263 attttaccaaattattctaatcaactactggtttattgtttattaaagaaaaaat 317  Q
    ||||||||||||||| ||||||||||| |||| | || || ||||||||||||||    
T  52254004 attttaccaaattatcctaatcaactattggtctgtttttcattaaagaaaaaat 52253950  T

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Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 263 - 317
Target Start/End: Original strand, 52848055 - 52848109
Alignment:
Q  263 attttaccaaattattctaatcaactactggtttattgtttattaaagaaaaaat 317  Q
    ||||||||||||||| ||||||||||| ||| || || || ||||||||||||||    
T  52848055 attttaccaaattatcctaatcaactattggcttgtttttcattaaagaaaaaat 52848109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 227 - 285
Target Start/End: Complemental strand, 56460277 - 56460219
Alignment:
Q  227 ttaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattctaatca 285  Q
    |||| |||| |||| ||||||||||| ||| || ||||||||| |||||||||||||||    
T  56460277 ttaagaaatacattaattaaaagaaagagatatattattttactaaattattctaatca 56460219  T

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Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 291
Target Start/End: Original strand, 18052649 - 18052715
Alignment:
Q  223 tatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattctaatcaactact 291  Q
    |||||||| |||| |||| |||||||||||  |||||||||| |||| ||||||| |||| ||||||||    
T  18052649 tatattaagaaatacattaattaaaagaaa--gagatgttatcttactaaattatcctaaccaactact 18052715  T

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Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 232 - 277
Target Start/End: Complemental strand, 33034233 - 33034188
Alignment:
Q  232 aaattcattgattaaaagaaaaagagatgttattttaccaaattat 277  Q
    |||| |||| ||||||||||||||| |||| |||||||||||||||    
T  33034233 aaatacattaattaaaagaaaaagatatgtcattttaccaaattat 33034188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 263 - 316
Target Start/End: Complemental strand, 50623240 - 50623187
Alignment:
Q  263 attttaccaaattattctaatcaactactggtttattgtttattaaagaaaaaa 316  Q
    |||||| |||||||| ||||||||||| |||||| || || |||||||||||||    
T  50623240 attttatcaaattatcctaatcaactattggtttgtttttcattaaagaaaaaa 50623187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 215 - 295
Target Start/End: Complemental strand, 4505529 - 4505449
Alignment:
Q  215 tttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattctaatcaactactggtt 295  Q
    |||||| | ||||||| |||| || ||||||||||||| |||   |||||||||||||||||| || || ||||| |||||    
T  4505529 tttacaaacatattaagaaatgcaatgattaaaagaaagagaatggttattttaccaaattatccttattaactattggtt 4505449  T

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Target: scaffold0983 (Bit Score: 51; Significance: 5e-20; HSPs: 1)
Name: scaffold0983
Description:

Target: scaffold0983; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 206 - 316
Target Start/End: Original strand, 628 - 737
Alignment:
Q  206 tttaagatttttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattctaatcaactactggtttattgtttat 305  Q
    |||||||||||||||||||| |||| |||| |||| ||||| | ||||||||||||||||||||||||||||  |||||||||| || | | || || ||    
T  628 tttaagatttttacacatatgttaagaaatacatttattaata-aaaaagagatgttattttaccaaattatcttaatcaactattgatatgtttttcat 726  T
Q  306 taaagaaaaaa 316  Q
    |||||||||||    
T  727 taaagaaaaaa 737  T

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Target: scaffold0136 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 206 - 316
Target Start/End: Complemental strand, 9754 - 9647
Alignment:
Q  206 tttaagatttttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattctaatcaactactggtttattgtttat 305  Q
    |||||| ||||| |||| ||||||| |||| |||| |||||||   ||| |||||||||||||| ||||||| ||||||||||| |||||| || || ||    
T  9754 tttaaggtttttgcacacatattaagaaatacattaattaaaa---aaatagatgttattttactaaattatcctaatcaactattggtttgtttttcat 9658  T
Q  306 taaagaaaaaa 316  Q
    |||||||||||    
T  9657 taaagaaaaaa 9647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 185 - 316
Target Start/End: Complemental strand, 4374 - 4243
Alignment:
Q  185 tccgttttaaaatgaaccttatttaagatttttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattctaatc 284  Q
    ||||||||||||||||  || |||||| |||||||||| ||||||| ||||  ||| |  |||||||| | |||| ||||||||||||||||| || |||    
T  4374 tccgttttaaaatgaattttgtttaaggtttttacacacatattaagaaatatattaaagaaaagaaatatagatattattttaccaaattatccttatc 4275  T
Q  285 aactactggtttattgtttattaaagaaaaaa 316  Q
    ||||| |  ||| || |||||||||| |||||    
T  4274 aactattaatttgttttttattaaaggaaaaa 4243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0300 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0300
Description:

Target: scaffold0300; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 185 - 310
Target Start/End: Complemental strand, 4796 - 4673
Alignment:
Q  185 tccgttttaaaatgaaccttatttaagatttttacacatatattaaaaaattcattgattaaaagaaaaagagatgttattttaccaaattattctaatc 284  Q
    ||||||||||||| ||  |  ||||| ||||||||||| ||||||| |||| |||| | ||||| |||||||  ||||||||||||||| ||| ||||||    
T  4796 tccgttttaaaataaatgtcgtttaaaatttttacacacatattaagaaatgcattaactaaaaaaaaaaga--tgttattttaccaaactatcctaatc 4699  T
Q  285 aactactggtttattgtttattaaag 310  Q
    ||||| || ||| || ||||||||||    
T  4698 aactattgatttgttttttattaaag 4673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 317 - 390
Target Start/End: Complemental strand, 206320 - 206247
Alignment:
Q  317 ttgttgtagcggatgaccggagaatgattaacctgcaaaataacaaaccgtgaaacaaacataaggcgtgacta 390  Q
    ||||| ||||||||| | ||| ||||||||||||||||||||||||||| ||||| |||| | |||||||||||    
T  206320 ttgttatagcggatgtctggaaaatgattaacctgcaaaataacaaaccatgaaataaacttgaggcgtgacta 206247  T

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Target: scaffold0182 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 244 - 317
Target Start/End: Original strand, 18233 - 18306
Alignment:
Q  244 taaaagaaaaagagatgttattttaccaaattattctaatcaactactggtttattgtttattaaagaaaaaat 317  Q
    ||||||||| | | ||||||||||| ||||||||| |||||||||| |||||| || || |||||||| |||||    
T  18233 taaaagaaagaaaaatgttattttatcaaattattttaatcaactattggtttgtttttcattaaagataaaat 18306  T

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Target: scaffold0294 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 263 - 317
Target Start/End: Original strand, 3501 - 3555
Alignment:
Q  263 attttaccaaattattctaatcaactactggtttattgtttattaaagaaaaaat 317  Q
    |||||| |||||||| ||||||||||| |||||| || || ||||||||||||||    
T  3501 attttatcaaattatcctaatcaactattggtttgtttttcattaaagaaaaaat 3555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0502 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0502
Description:

Target: scaffold0502; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 241 - 289
Target Start/End: Original strand, 547 - 595
Alignment:
Q  241 gattaaaagaaaaagagatgttattttaccaaattattctaatcaacta 289  Q
    |||| ||||||| |||||| |||||||||||||||||  ||||||||||    
T  547 gattcaaagaaagagagatattattttaccaaattatcataatcaacta 595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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