View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8397_low_3 (Length: 455)
Name: NF8397_low_3
Description: NF8397
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8397_low_3 |
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Alignment Details
Target: chr7 (Bit Score: 284; Significance: 1e-159; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 284; E-Value: 1e-159
Query Start/End: Original strand, 99 - 435
Target Start/End: Complemental strand, 8284151 - 8283815
Alignment:
| Q |
99 |
gacaatatgaactatcataatttctttttaagtttatatcaaaactgaaaaatttgtaaactacaatatgaacaatggagtatcataatatttctataaa |
198 |
Q |
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| T |
8284151 |
gacaatatgaactatcataatttttttttaagtttatatcaaaactgaaaaatttgtaaactacaatatgaacaatggagtatcataatatttctataaa |
8284052 |
T |
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| Q |
199 |
acaattggataaattatcttcatctgttgctttggtttacaatccttagtgtacacattaaaacaatgacagaaactacaatagaaagacttaggtatat |
298 |
Q |
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| T |
8284051 |
acaattggataagttatcttcatctcttgctttggtttataatccttagtgtatacattaaaacaatgacagaaactacaatagaaatactaaggtatat |
8283952 |
T |
|
| Q |
299 |
aattatcaaaaatatatttaaacacaatannnnnnncttcaatagaacgctgcaaatattgtaaaaagtaaaatcaattatattaaaatataattgctcg |
398 |
Q |
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| T |
8283951 |
aattatcaaaaatatatttaaacacaatatttttttcttcaatagaacgctgcaaatattgtaaaaagtaaaatcaattatattaaaatataattgctcg |
8283852 |
T |
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| Q |
399 |
atcggatctcaagtgacggatcttaaataacaccaaa |
435 |
Q |
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|||||||||||||||||| |||||||||||||||||| |
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| T |
8283851 |
atcggatctcaagtgacgaatcttaaataacaccaaa |
8283815 |
T |
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