View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8398_low_3 (Length: 246)
Name: NF8398_low_3
Description: NF8398
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8398_low_3 |
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Alignment Details
Target: chr7 (Bit Score: 168; Significance: 4e-90; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 15 - 223
Target Start/End: Original strand, 36571761 - 36571978
Alignment:
| Q |
15 |
gatgaagtggatagatctcgtttgcagctttataagagagagatgggcaaaa-ggtgaaaaatatatatgtagaaat-----gaataaatgaaaactggg |
108 |
Q |
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| T |
36571761 |
gatgaagtggatagatctcgtttgcagctttataagagagagatgggcaaaaaggtgaaaaatatatatgtagaaattaaatgaataaatgaaaactggg |
36571860 |
T |
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| Q |
109 |
agtgtgcattgtggagcccaatttgtgttggttagggtgattggtaacatatactgatatgaatacat---tacattcaccacccttccttctgctggat |
205 |
Q |
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|||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
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| T |
36571861 |
agtgtgcaatgtggagcccaatttgtgttggttggggtgattggtaacatatactgatatgaatacattactacattcaccacccttccttctgctggat |
36571960 |
T |
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| Q |
206 |
aaactgtagtttgtgatc |
223 |
Q |
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|||||||||||||||||| |
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| T |
36571961 |
aaactgtagtttgtgatc |
36571978 |
T |
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