View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8402_high_12 (Length: 240)
Name: NF8402_high_12
Description: NF8402
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8402_high_12 |
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Alignment Details
Target: chr5 (Bit Score: 167; Significance: 1e-89; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 53 - 227
Target Start/End: Original strand, 36045503 - 36045677
Alignment:
| Q |
53 |
tccttaaaatctaactattcgccccattttgtcaacataaaaaatggagggagcacaatgaaactattagatggttggagattaatcgtttgaagataac |
152 |
Q |
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| T |
36045503 |
tccttaaaatctaactattcgccccattttgtcaacataaaaaatggagggagcacaatgaaactattagatggttggagattaatcgtttgaagataat |
36045602 |
T |
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| Q |
153 |
gtggaagctaggtttgagaatttcctcaggtcatggagaaagacagaaagtgttaacacataggggttgattgtg |
227 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
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| T |
36045603 |
gtggaagctaggtttgagaatttcctcaggtcatggagaaagacagaaagtgtcaacacataggggttgattgtg |
36045677 |
T |
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