View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8402_low_1 (Length: 987)

Name: NF8402_low_1
Description: NF8402
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8402_low_1
NF8402_low_1
[»] chr3 (40 HSPs)
chr3 (295-971)||(33734562-33735234)
chr3 (1-156)||(44907523-44907677)
chr3 (1-150)||(4178366-4178515)
chr3 (1-156)||(12115889-12116044)
chr3 (1-146)||(36905927-36906072)
chr3 (1-148)||(32607271-32607418)
chr3 (1-154)||(38855161-38855313)
chr3 (1-150)||(4172368-4172517)
chr3 (1-145)||(46934449-46934593)
chr3 (3-146)||(25162242-25162385)
chr3 (1-150)||(2342294-2342442)
chr3 (1-123)||(25631651-25631773)
chr3 (1-101)||(14464358-14464458)
chr3 (1-153)||(50611541-50611693)
chr3 (1-151)||(3850579-3850726)
chr3 (1-145)||(39917520-39917664)
chr3 (12-148)||(51202384-51202520)
chr3 (1-145)||(35499325-35499470)
chr3 (1-151)||(38440701-38440846)
chr3 (5-151)||(25849622-25849767)
chr3 (1-95)||(49552347-49552441)
chr3 (223-285)||(33732883-33732945)
chr3 (1-138)||(29503275-29503413)
chr3 (2-145)||(37169039-37169180)
chr3 (2-83)||(22802890-22802971)
chr3 (2-95)||(36735277-36735370)
chr3 (2-81)||(46178447-46178526)
chr3 (48-145)||(47980839-47980935)
chr3 (48-145)||(47990126-47990222)
chr3 (48-145)||(47999413-47999509)
chr3 (48-145)||(48008700-48008796)
chr3 (1-144)||(21487918-21488062)
chr3 (1-83)||(17237671-17237753)
chr3 (35-151)||(30648898-30649012)
chr3 (1-112)||(31793920-31794030)
chr3 (10-95)||(19605908-19605993)
chr3 (33-79)||(6823553-6823599)
chr3 (1-66)||(42719406-42719471)
chr3 (2-150)||(3606562-3606710)
chr3 (122-151)||(19222413-19222442)
[»] chr6 (27 HSPs)
chr6 (1-153)||(25064036-25064188)
chr6 (1-153)||(8496766-8496918)
chr6 (1-150)||(12652744-12652893)
chr6 (1-149)||(23947441-23947589)
chr6 (1-95)||(7881227-7881321)
chr6 (1-149)||(17334582-17334728)
chr6 (1-151)||(16418962-16419111)
chr6 (1-139)||(33109649-33109787)
chr6 (6-145)||(10228493-10228627)
chr6 (1-95)||(33740702-33740796)
chr6 (1-89)||(17237408-17237496)
chr6 (1-112)||(4984702-4984812)
chr6 (1-95)||(7876169-7876263)
chr6 (1-150)||(8028242-8028391)
chr6 (1-150)||(4468371-4468512)
chr6 (1-145)||(8196531-8196675)
chr6 (1-138)||(12165657-12165794)
chr6 (1-150)||(4088263-4088413)
chr6 (2-141)||(34489061-34489202)
chr6 (2-95)||(33543744-33543838)
chr6 (1-60)||(5582776-5582835)
chr6 (11-81)||(23217124-23217194)
chr6 (4-82)||(28635249-28635327)
chr6 (2-54)||(8266535-8266587)
chr6 (3-85)||(1523250-1523332)
chr6 (1-83)||(9508840-9508921)
chr6 (2-44)||(25398476-25398518)
[»] chr8 (33 HSPs)
chr8 (1-153)||(9619482-9619634)
chr8 (1-153)||(14907048-14907200)
chr8 (1-139)||(9498726-9498863)
chr8 (2-142)||(43890250-43890390)
chr8 (1-145)||(44100056-44100200)
chr8 (1-136)||(11725507-11725642)
chr8 (3-132)||(42448154-42448283)
chr8 (1-149)||(11196704-11196850)
chr8 (1-113)||(2655717-2655829)
chr8 (1-109)||(4808816-4808924)
chr8 (3-153)||(44577846-44577994)
chr8 (2-150)||(33342250-33342396)
chr8 (9-149)||(29777041-29777181)
chr8 (1-151)||(9072527-9072677)
chr8 (1-149)||(19876029-19876172)
chr8 (2-129)||(28239665-28239792)
chr8 (1-151)||(32724613-32724764)
chr8 (1-132)||(35580286-35580418)
chr8 (1-123)||(17949085-17949207)
chr8 (1-136)||(33895907-33896041)
chr8 (1-129)||(11464004-11464130)
chr8 (1-113)||(34611652-34611764)
chr8 (1-116)||(27747236-27747351)
chr8 (2-145)||(16794110-16794252)
chr8 (1-129)||(15597290-15597419)
chr8 (30-132)||(15046721-15046824)
chr8 (7-103)||(12173361-12173455)
chr8 (7-103)||(12417789-12417883)
chr8 (1-114)||(12184135-12184245)
chr8 (1-114)||(12428563-12428673)
chr8 (1-76)||(37566003-37566079)
chr8 (2-44)||(18733938-18733980)
chr8 (1-85)||(31013730-31013817)
[»] chr7 (39 HSPs)
chr7 (1-149)||(46821819-46821967)
chr7 (1-156)||(2843351-2843506)
chr7 (1-154)||(26583514-26583667)
chr7 (1-151)||(21266195-21266345)
chr7 (5-150)||(42311084-42311229)
chr7 (1-147)||(26492172-26492318)
chr7 (1-145)||(22927994-22928138)
chr7 (1-152)||(32684485-32684638)
chr7 (1-146)||(1448953-1449098)
chr7 (1-151)||(23085325-23085474)
chr7 (1-128)||(35496299-35496426)
chr7 (1-144)||(1485380-1485521)
chr7 (1-149)||(20116388-20116536)
chr7 (1-149)||(35667355-35667502)
chr7 (1-109)||(46338898-46339006)
chr7 (44-151)||(12539122-12539229)
chr7 (2-85)||(23425496-23425579)
chr7 (2-129)||(31235917-31236044)
chr7 (1-89)||(42067184-42067272)
chr7 (1-131)||(433816-433944)
chr7 (1-132)||(14628003-14628135)
chr7 (1-82)||(48207775-48207855)
chr7 (1-91)||(42408225-42408315)
chr7 (2-112)||(6001862-6001973)
chr7 (1-78)||(3860828-3860905)
chr7 (1-145)||(32522050-32522198)
chr7 (1-89)||(45199155-45199243)
chr7 (1-109)||(36143711-36143819)
chr7 (58-112)||(6558758-6558813)
chr7 (30-87)||(17610998-17611055)
chr7 (9-116)||(20083169-20083276)
chr7 (1-85)||(1749305-1749389)
chr7 (1-36)||(5546277-5546312)
chr7 (28-95)||(17499797-17499864)
chr7 (28-95)||(17553350-17553417)
chr7 (1-85)||(24351005-24351091)
chr7 (1-85)||(35132794-35132880)
chr7 (1-95)||(35261156-35261251)
chr7 (1-84)||(19404916-19405001)
[»] chr5 (44 HSPs)
chr5 (1-156)||(30371525-30371680)
chr5 (1-152)||(34881515-34881665)
chr5 (1-145)||(36344613-36344757)
chr5 (1-139)||(7241600-7241738)
chr5 (1-139)||(7246776-7246914)
chr5 (10-145)||(41184578-41184712)
chr5 (1-151)||(42579683-42579836)
chr5 (1-151)||(19281068-19281218)
chr5 (1-142)||(27266984-27267125)
chr5 (1-149)||(26578058-26578205)
chr5 (2-150)||(19259938-19260081)
chr5 (1-149)||(7887061-7887209)
chr5 (1-93)||(10649317-10649409)
chr5 (1-131)||(18677590-18677720)
chr5 (1-151)||(43261941-43262091)
chr5 (1-138)||(21060405-21060542)
chr5 (1-132)||(3271532-3271661)
chr5 (3-109)||(16981138-16981244)
chr5 (1-115)||(28235427-28235541)
chr5 (1-128)||(7150459-7150586)
chr5 (1-82)||(781264-781345)
chr5 (1-89)||(35475460-35475548)
chr5 (2-112)||(11767651-11767762)
chr5 (2-127)||(6445766-6445891)
chr5 (32-148)||(27751723-27751840)
chr5 (1-66)||(2057962-2058027)
chr5 (1-145)||(11192178-11192322)
chr5 (1-91)||(20257818-20257908)
chr5 (1-82)||(14211076-14211157)
chr5 (2-95)||(15570771-15570864)
chr5 (1-85)||(2979474-2979560)
chr5 (41-135)||(4953902-4953998)
chr5 (31-96)||(33029710-33029776)
chr5 (3-88)||(42432203-42432287)
chr5 (1-112)||(42432745-42432856)
chr5 (1-62)||(8088374-8088436)
chr5 (1-83)||(28097027-28097108)
chr5 (1-83)||(31802598-31802678)
chr5 (1-85)||(39567136-39567222)
chr5 (5-62)||(27576477-27576535)
chr5 (1-35)||(30298130-30298164)
chr5 (1-55)||(38549153-38549207)
chr5 (1-85)||(6012299-6012386)
chr5 (1-85)||(38007198-38007283)
[»] chr2 (48 HSPs)
chr2 (1-155)||(30420480-30420634)
chr2 (1-149)||(36233814-36233962)
chr2 (1-150)||(2808594-2808743)
chr2 (1-147)||(27249275-27249421)
chr2 (1-151)||(45128012-45128161)
chr2 (1-150)||(34598795-34598945)
chr2 (1-145)||(6173445-6173589)
chr2 (1-145)||(21570532-21570676)
chr2 (1-150)||(41712889-41713038)
chr2 (1-126)||(8971750-8971877)
chr2 (1-150)||(3270352-3270501)
chr2 (1-142)||(9986469-9986612)
chr2 (6-144)||(20047211-20047348)
chr2 (18-150)||(33229129-33229261)
chr2 (1-108)||(7015834-7015941)
chr2 (1-132)||(40626151-40626282)
chr2 (1-151)||(27476962-27477112)
chr2 (1-148)||(459398-459545)
chr2 (1-126)||(3725013-3725138)
chr2 (6-151)||(25086843-25086986)
chr2 (1-154)||(42949519-42949672)
chr2 (1-136)||(40660055-40660187)
chr2 (1-151)||(31581843-31581976)
chr2 (1-122)||(32680706-32680826)
chr2 (1-123)||(32913077-32913199)
chr2 (1-85)||(4192712-4192796)
chr2 (1-140)||(39641983-39642122)
chr2 (3-79)||(4228011-4228087)
chr2 (3-90)||(24587581-24587669)
chr2 (30-95)||(9374702-9374767)
chr2 (1-149)||(26025533-26025682)
chr2 (1-109)||(27949272-27949380)
chr2 (8-56)||(41430930-41430978)
chr2 (10-145)||(17319139-17319272)
chr2 (1-108)||(37614248-37614356)
chr2 (1-84)||(43397282-43397366)
chr2 (1-85)||(3308790-3308876)
chr2 (1-44)||(8805781-8805824)
chr2 (2-83)||(30923599-30923678)
chr2 (2-44)||(32197919-32197961)
chr2 (67-112)||(10248011-10248056)
chr2 (1-85)||(32448784-32448869)
chr2 (1-54)||(23933783-23933838)
chr2 (22-125)||(34124287-34124391)
chr2 (1-81)||(10237375-10237457)
chr2 (2-44)||(18694961-18695004)
chr2 (3-85)||(14955374-14955458)
chr2 (1-81)||(39285420-39285501)
[»] chr1 (46 HSPs)
chr1 (1-153)||(19716021-19716172)
chr1 (1-149)||(40646497-40646645)
chr1 (1-156)||(5701059-5701214)
chr1 (1-139)||(35584745-35584883)
chr1 (1-145)||(18569434-18569576)
chr1 (1-148)||(25728083-25728227)
chr1 (1-151)||(51871672-51871821)
chr1 (1-145)||(5324681-5324825)
chr1 (6-151)||(7342529-7342674)
chr1 (1-135)||(25406408-25406542)
chr1 (1-145)||(33291542-33291687)
chr1 (1-109)||(30878924-30879032)
chr1 (1-109)||(50272264-50272372)
chr1 (1-139)||(9172307-9172445)
chr1 (1-139)||(9180289-9180427)
chr1 (1-135)||(51868769-51868903)
chr1 (1-145)||(45426186-45426331)
chr1 (1-134)||(50148196-50148329)
chr1 (1-137)||(30818469-30818604)
chr1 (1-149)||(19723143-19723290)
chr1 (1-146)||(50166223-50166367)
chr1 (1-108)||(20266151-20266259)
chr1 (1-148)||(45805933-45806081)
chr1 (1-116)||(40881137-40881252)
chr1 (1-138)||(14545340-14545477)
chr1 (1-152)||(27872549-27872696)
chr1 (1-127)||(38520657-38520784)
chr1 (1-146)||(7312222-7312370)
chr1 (1-116)||(11453777-11453893)
chr1 (1-143)||(44637235-44637379)
chr1 (1-89)||(28035008-28035096)
chr1 (86-156)||(31836668-31836738)
chr1 (1-86)||(7997659-7997744)
chr1 (2-91)||(39987251-39987346)
chr1 (2-52)||(9919295-9919345)
chr1 (1-81)||(3871285-3871366)
chr1 (13-82)||(48365887-48365956)
chr1 (3-85)||(16161676-16161760)
chr1 (3-152)||(41081829-41081983)
chr1 (100-151)||(9919233-9919284)
chr1 (66-145)||(48217443-48217520)
chr1 (1-37)||(34519054-34519090)
chr1 (1-85)||(49626754-49626840)
chr1 (3-53)||(34528595-34528645)
chr1 (503-596)||(2748801-2748894)
chr1 (1-85)||(29738797-29738884)
[»] chr4 (47 HSPs)
chr4 (2-149)||(9283728-9283875)
chr4 (1-156)||(47416695-47416849)
chr4 (1-156)||(50766633-50766790)
chr4 (6-151)||(6972625-6972769)
chr4 (1-150)||(9529002-9529151)
chr4 (1-138)||(53616775-53616912)
chr4 (1-153)||(20569065-20569217)
chr4 (1-153)||(2115712-2115863)
chr4 (1-149)||(10389877-10390025)
chr4 (1-141)||(43444218-43444358)
chr4 (1-144)||(9645673-9645816)
chr4 (1-154)||(1531718-1531872)
chr4 (1-151)||(43154145-43154294)
chr4 (1-151)||(25273690-25273845)
chr4 (2-151)||(5333656-5333802)
chr4 (1-116)||(38706834-38706949)
chr4 (19-145)||(867978-868104)
chr4 (1-150)||(31381795-31381944)
chr4 (2-118)||(35965100-35965216)
chr4 (1-116)||(34024560-34024675)
chr4 (2-151)||(10359671-10359821)
chr4 (3-139)||(4643683-4643821)
chr4 (1-145)||(56194417-56194564)
chr4 (1-136)||(37188716-37188851)
chr4 (42-139)||(44947230-44947327)
chr4 (1-95)||(51317856-51317951)
chr4 (2-145)||(18139038-18139180)
chr4 (2-145)||(49126251-49126393)
chr4 (1-123)||(21089995-21090118)
chr4 (73-148)||(29965493-29965568)
chr4 (9-139)||(27593970-27594098)
chr4 (2-116)||(12265304-12265419)
chr4 (1-145)||(2624318-2624463)
chr4 (48-123)||(50179614-50179689)
chr4 (2-76)||(5333584-5333658)
chr4 (1-116)||(35261038-35261157)
chr4 (1-45)||(49680458-49680502)
chr4 (1-76)||(1008185-1008260)
chr4 (1-44)||(8009483-8009526)
chr4 (30-108)||(3338816-3338894)
chr4 (2-123)||(52098044-52098165)
chr4 (28-137)||(1931854-1931963)
chr4 (1-40)||(14183729-14183768)
chr4 (1-35)||(29965565-29965599)
chr4 (1-42)||(49072881-49072922)
chr4 (1-85)||(22558625-22558713)
chr4 (1-85)||(53810889-53810976)
[»] scaffold0426 (1 HSPs)
scaffold0426 (1-151)||(6142-6291)
[»] scaffold0003 (1 HSPs)
scaffold0003 (1-150)||(361920-362067)
[»] scaffold0311 (1 HSPs)
scaffold0311 (1-144)||(8532-8673)
[»] scaffold0495 (1 HSPs)
scaffold0495 (6-145)||(5212-5346)
[»] scaffold0231 (1 HSPs)
scaffold0231 (81-156)||(25661-25736)
[»] scaffold0608 (1 HSPs)
scaffold0608 (48-123)||(73-148)
[»] scaffold0146 (1 HSPs)
scaffold0146 (1-83)||(16446-16528)
[»] scaffold0264 (1 HSPs)
scaffold0264 (1-95)||(20518-20610)
[»] scaffold0888 (1 HSPs)
scaffold0888 (1-85)||(1836-1922)
[»] scaffold0014 (1 HSPs)
scaffold0014 (1-40)||(201495-201534)
[»] scaffold0009 (1 HSPs)
scaffold0009 (3-85)||(58243-58327)
[»] scaffold0127 (1 HSPs)
scaffold0127 (1-85)||(15333-15419)
[»] scaffold0113 (1 HSPs)
scaffold0113 (2-57)||(36810-36865)


Alignment Details
Target: chr3 (Bit Score: 497; Significance: 0; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 497; E-Value: 0
Query Start/End: Original strand, 295 - 971
Target Start/End: Original strand, 33734562 - 33735234
Alignment:
Q  295 ttaaatgaattgtcaaaataaaatttgacctataatttcatttnnnnnnntcagttttatcgtacatcaaaattacttagttttttcacatagagcaaaa 394  Q
    |||||||||||||||||||||||||||||||||||||||||||       |||| || ||||||||||||||||||||||||||||||||||||||||||    
T  33734562 ttaaatgaattgtcaaaataaaatttgacctataatttcattttaaaaaatcagattcatcgtacatcaaaattacttagttttttcacatagagcaaaa 33734661  T
Q  395 atgataatnnnnnnnnnnnn-gnnnnnnnacaagactatatttagtaacataaatgtcttattcatgtggaaattttttgagaaggaatgcaccaacata 493  Q
    |||||||              |       |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  33734662 atgataaaaaagaaaaaaaaagtttgtttacaagactatatttagtaacataaatgtgttattcatgtggaaattttttgagaaggaatgcaccaacata 33734761  T
Q  494 aatgcaaaacaatgcaaacacacaccatataaattagcatacattaaatatatcacgcgttttcataaacttagtaaaatggtatttaaaacatccataa 593  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33734762 aatgcaaaacaatgcaaacacacaccatataaattagcatacattaaatatatcacgcgttttcataaacttagtaaaatggtatttaaaacatccataa 33734861  T
Q  594 aatactctacttgcatggctaatactccataactaatgcttatatctatgcagattttgaatgatgtcgcgatggacttcatcacaaggttacaccatca 693  Q
    |||||||||||||||||||||||     ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  33734862 aatactctacttgcatggctaat-----ataactaatgcttatatctatgcagattttggatgatgtcgcgatggacttcatcacaaggttacaccatca 33734956  T
Q  694 ttttggtggtaattgatc-catttctaagtacactcacatcgctgcattaaaatcatagtacacgagctctaaggatgttgaaaccttcatgcacattct 792  Q
    |||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  33734957 ttttggtggtaattgatcgcatttctaagtacactcgcatcgctgcattaaaatcatagtacacgagctctaaggatgttgaaaccttcatacacattct 33735056  T
Q  793 ggtgaagttgcatggtatttcaaataatattgttttcgacaaggatcgggggtctttgctattcgtttctctcaaagaataattaagttgagtggcacaa 892  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||  |||||||||||||||||   | |||||||||||||||||||    
T  33735057 ggtgaagttgcatggtatttcaaataatattgttttcgataaggatcgggggtctttaatattcgtttctctcaaa-ttttattaagttgagtggcacaa 33735155  T
Q  893 cctcgatcatcagatcctcctatcatcattaaagaaatggataatcggaagctttgaacaaatttttggaattgtactt 971  Q
    ||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  33735156 cctcgatcatcagatcctcctatcatccttaaataaatggataatcggaagctttgaacaaatttttggaattgtactt 33735234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 44907523 - 44907677
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgta 100  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| ||||||||||||    
T  44907523 gaaaatcacttgtttagattgaaataaagagaaaaagatgaagaggggtgatttcaggtcaagaattgacccaaaaccacccctcaaagaagaaattgta 44907622  T
Q  101 agaaaaaacctagagaaagaaaattagggccggcttgttggagagggagagattct 156  Q
     || |||||||||||| |||||| || |||||| ||||||||||||||||||||||    
T  44907623 ggagaaaacctagagagagaaaacta-ggccggtttgttggagagggagagattct 44907677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 110; E-Value: 6e-55
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 4178515 - 4178366
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgta 100  Q
    |||||||||||||||||||||||||| |||||||||||||||||  |||||||| | ||||||||||||||||||||||||||||||||||||||  |||    
T  4178515 gaaaatcacttatttagattgaaatagagagaaaaagatgaagatgggtgattttaggtcaagaattgacccaaaaccacccctcaatgaagaaacagta 4178416  T
Q  101 agaaaaaacctagagaaagaaaattagggccggcttgttggagagggaga 150  Q
    |||||||||||||||| |||||| |||||||| |||||||||||||||||    
T  4178415 agaaaaaacctagagagagaaaactagggccgacttgttggagagggaga 4178366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 108; E-Value: 1e-53
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 12116044 - 12115889
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgta 100  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||    
T  12116044 gaaaatcacttatttagattgaaataaagaggaaaagatgaagagagatgatttcaggtcaagaattgactcaaaaccacccctcaatgaagaaattgta 12115945  T
Q  101 agaaaaaacctagagaaagaaaattagggccggcttgttggagagggagagattct 156  Q
    | | |||||||||||| |||||| ||| |||| ||||||||||||||  |||||||    
T  12115944 aaagaaaacctagagagagaaaactagagccgacttgttggagagggcaagattct 12115889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 106; E-Value: 2e-52
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 36906072 - 36905927
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgta 100  Q
    |||||||||||||||| |||||||||||||||||||||||||||  |||||||||| |||||||||||||||||||||| || |||||||||||||||||    
T  36906072 gaaaatcacttatttatattgaaataaagagaaaaagatgaagaagggtgatttcaggtcaagaattgacccaaaaccatccatcaatgaagaaattgta 36905973  T
Q  101 agaaaaaacctagagaaagaaaattagggccggcttgttggagagg 146  Q
    ||| |||||||||||| ||||||||||||||| |||||| ||||||    
T  36905972 agagaaaacctagagagagaaaattagggccgacttgttagagagg 36905927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 105; E-Value: 6e-52
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 32607418 - 32607271
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccc-tcaatgaagaaattgt 99  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| ||| |||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  32607418 gaaaatcacttatttagattgaaataaagagaaaatgatgaagaggggt-atttcaggtcaagaattgacccaaaaccaccccctcaatgaagaaattgt 32607320  T
Q  100 aagaaaaaacctagagaaagaaaattagggccggcttgttggagaggga 148  Q
    |||| |||| ||||||| |||||| ||||||||||||||||||||||||    
T  32607319 aagagaaaatctagagagagaaaactagggccggcttgttggagaggga 32607271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 102; E-Value: 4e-50
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 38855161 - 38855313
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgta 100  Q
    |||||||||||||||||||||| ||| |||||||||||||||||| ||||||||   ||||||||| ||||||||||||||||||||||||||||| |||    
T  38855161 gaaaatcacttatttagattgatatagagagaaaaagatgaagaggggtgattttcggtcaagaat-gacccaaaaccacccctcaatgaagaaatagta 38855259  T
Q  101 agaaaaaacctagagaaagaaaattagggccggcttgttggagagggagagatt 154  Q
    ||| |||||||||||| |||||| ||||| ||||||||||||||||||||||||    
T  38855260 agagaaaacctagagagagaaaactagggtcggcttgttggagagggagagatt 38855313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 98; E-Value: 9e-48
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 4172517 - 4172368
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgta 100  Q
    |||||||||||||||||||||||||| |||||||||||||||||  | |||||| | || |||||||||||||||||||||||||||||||||||  |||    
T  4172517 gaaaatcacttatttagattgaaatagagagaaaaagatgaagatggatgattttatgttaagaattgacccaaaaccacccctcaatgaagaaacagta 4172418  T
Q  101 agaaaaaacctagagaaagaaaattagggccggcttgttggagagggaga 150  Q
    |||||||| ||||||| |||||| |||||||| |||||||||||||||||    
T  4172417 agaaaaaatctagagagagaaaactagggccgacttgttggagagggaga 4172368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 97; E-Value: 4e-47
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 46934593 - 46934449
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgta 100  Q
    |||||||||||||||||||||||||| ||||| |||||||||||| |||||||||| ||||| |||||||| ||||||||||||||||||||||| |  |    
T  46934593 gaaaatcacttatttagattgaaatagagagagaaagatgaagaggggtgatttcaggtcaaaaattgaccaaaaaccacccctcaatgaagaaagtaga 46934494  T
Q  101 agaaaaaacctagagaaagaaaattagggccggcttgttggagag 145  Q
    ||| |||||||||||| ||||||||||||||| ||||||||||||    
T  46934493 agagaaaacctagagagagaaaattagggccgacttgttggagag 46934449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 3 - 146
Target Start/End: Complemental strand, 25162385 - 25162242
Alignment:
Q  3 aaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgtaag 102  Q
    |||||||||||||||||||||||| |||||||||||||||||  ||||||||||| |||||||||||| ||||||||||||||| |||||||| ||||||    
T  25162385 aaatcacttatttagattgaaatagagagaaaaagatgaagatgggtgatttcaaatcaagaattgacacaaaaccacccctcagtgaagaaactgtaag 25162286  T
Q  103 aaaaaacctagagaaagaaaattagggccggcttgttggagagg 146  Q
    | |||||||||||| |||||| ||| ||||| ||||||||||||    
T  25162285 agaaaacctagagagagaaaactagagccggtttgttggagagg 25162242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 90; E-Value: 6e-43
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 2342442 - 2342294
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgta 100  Q
    |||||||||||||||||||||||||| |||||||||||||||||| | ||||| || ||  |||||||||||||||||||||||||| ||||||| ||||    
T  2342442 gaaaatcacttatttagattgaaatagagagaaaaagatgaagagggttgatt-caggtttagaattgacccaaaaccacccctcaacgaagaaactgta 2342344  T
Q  101 agaaaaaacctagagaaagaaaattagggccggcttgttggagagggaga 150  Q
    ||| |||||||| | ||| ||||||||||||||||| |||||||||||||    
T  2342343 agagaaaacctataaaaaaaaaattagggccggcttattggagagggaga 2342294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 83; E-Value: 8e-39
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 25631651 - 25631773
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgta 100  Q
    |||||||||||||||||||||||||| ||||||||||||| |||| | |||||| | ||||| ||||||||||||||||||||||||||||||||| |||    
T  25631651 gaaaatcacttatttagattgaaatagagagaaaaagatggagagggatgattttaggtcaaaaattgacccaaaaccacccctcaatgaagaaatagta 25631750  T
Q  101 agaaaaaacctagagaaagaaaa 123  Q
    ||| |||||||||||| ||||||    
T  25631751 agagaaaacctagagagagaaaa 25631773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 14464458 - 14464358
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgta 100  Q
    |||||||||||||||||||||||||||||||||||||||||| || |||||||||| ||||||||||||||||||||||||| |||||||| ||||||||    
T  14464458 gaaaatcacttatttagattgaaataaagagaaaaagatgaataggggtgatttcaggtcaagaattgacccaaaaccacccttcaatgaaaaaattgta 14464359  T
Q  101 a 101  Q
    |    
T  14464358 a 14464358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 50611541 - 50611693
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgta 100  Q
    |||||||||||||||||||||||||| |||||||||||||||||| |||||||| | ||||| |||||||||||||||| | |||||||||||||   ||    
T  50611541 gaaaatcacttatttagattgaaatatagagaaaaagatgaagaggggtgattttaggtcaataattgacccaaaaccatctctcaatgaagaaacaata 50611640  T
Q  101 agaaaaaacctagagaaagaaaattagggccggcttgttggagagggagagat 153  Q
    ||| ||||| || ||| | |||| ||| |||||||| ||||||||||||||||    
T  50611641 agagaaaacttaaagagaaaaaactagagccggcttattggagagggagagat 50611693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 3850579 - 3850726
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgta 100  Q
    |||| ||||||||||||||||||||| |||||||||||||||||| |||||||||| |||||||||||| ||||||||||||| |||| ||||||| | |    
T  3850579 gaaagtcacttatttagattgaaatagagagaaaaagatgaagaggggtgatttcaggtcaagaattgatccaaaaccacccc-caataaagaaatggga 3850677  T
Q  101 agaaaaaacctagagaaagaaaattagggccggcttgttggagagggagag 151  Q
     || ||||| |||||  |||||||||||| |||||||||||||||| ||||    
T  3850678 tgagaaaacttagag--agaaaattagggtcggcttgttggagaggaagag 3850726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 39917520 - 39917664
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgta 100  Q
    ||||||||||||||||||||||| || ||||||||| |||||||  | |||||||| ||||||||||||||||||||||| ||||| |||||||| ||||    
T  39917520 gaaaatcacttatttagattgaattagagagaaaaatatgaagatggatgatttcaggtcaagaattgacccaaaaccactcctcagtgaagaaactgta 39917619  T
Q  101 agaaaaaacctagagaaagaaaattagggccggcttgttggagag 145  Q
    ||  |||||||||||| |||||| || ||| || |||||||||||    
T  39917620 agggaaaacctagagagagaaaactaaggctggtttgttggagag 39917664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 12 - 148
Target Start/End: Original strand, 51202384 - 51202520
Alignment:
Q  12 atttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgtaagaaaaaacct 111  Q
    ||||||||||||||| ||||||||| |||||||  |||||||||| ||||||||||||||||||| ||||||||||| |||||| ||||||| |||||||    
T  51202384 atttagattgaaatagagagaaaaatatgaagatgggtgatttcaggtcaagaattgacccaaaatcacccctcaataaagaaactgtaagagaaaacct 51202483  T
Q  112 agagaaagaaaattagggccggcttgttggagaggga 148  Q
    | ||| | |||| || ||||| |||||||||||||||    
T  51202484 aaagagaaaaaactaaggccgacttgttggagaggga 51202520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 35499325 - 35499470
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaaga-gaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgt 99  Q
    |||||||||||||||||||||||||||||||||||||||||||| | |||||||||| || || |||||||| |||||||||||||||||||||| ||||    
T  35499325 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagggggtgatttcaggtaaaaaattgaccaaaaaccacccctcaatgaagaatttgt 35499424  T
Q  100 aagaaaaaacctagagaaagaaaattagggccggcttgttggagag 145  Q
    || | ||||  |||||  ||||||||| | ||| ||| ||||||||    
T  35499425 aaaagaaaatttagagggagaaaattaagaccgacttattggagag 35499470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 38440701 - 38440846
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgta 100  Q
    |||||||||||||||||||||||||| |||||||||||| |||||  ||||||||| ||||||||||||| ||||||||||  |||||||||||| ||||    
T  38440701 gaaaatcacttatttagattgaaatagagagaaaaagataaagaggagtgatttcaggtcaagaattgactcaaaaccaccattcaatgaagaaactgta 38440800  T
Q  101 agaaaaaacctagagaaagaaaattagggccggcttgttggagagggagag 151  Q
    |  ||||   |||||  ||||||||| ||||| ||||||||||||||||||    
T  38440801 aagaaaa---tagag--agaaaattaaggccgacttgttggagagggagag 38440846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 5 - 151
Target Start/End: Complemental strand, 25849767 - 25849622
Alignment:
Q  5 atcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgtaagaa 104  Q
    ||||||||| |  ||||||||| | ||||||||| ||| |  |||||||||||||||| ||||||| ||||||||||||||||| |||||  || |||||    
T  25849767 atcacttatctgaattgaaatagaaagaaaaagacgaataagggtgatttcaagtcaaaaattgactcaaaaccacccctcaattaagaagctggaagaa 25849668  T
Q  105 aaaacctagagaaagaaaattagggccggcttgttggagagggagag 151  Q
    |||||||||||| | |||| |||||||||||| ||||||||||||||    
T  25849667 aaaacctagagaga-aaaactagggccggcttattggagagggagag 25849622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 49552347 - 49552441
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaa 95  Q
    |||| ||||||||||||||||||||| ||| |||| ||||||||| |||||||||| ||||||||||||||||||||||||| ||||||||||||    
T  49552347 gaaattcacttatttagattgaaatagagaaaaaatgatgaagaggggtgatttcaggtcaagaattgacccaaaaccacccatcaatgaagaaa 49552441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 223 - 285
Target Start/End: Original strand, 33732883 - 33732945
Alignment:
Q  223 tagattggtcagactcacctcgacctaataggctcgtatatataaataatttgaattggttcg 285  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33732883 tagattggtcagactcacctcgacctaataggctcgtatatataaataatttgaattggttcg 33732945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 29503413 - 29503275
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaacca-cccctcaatgaagaaattgt 99  Q
    |||||||| ||||||||||||||||| ||||||||| |||||||  |||||||||| ||||||||||||||||||| || |||||| ||||| ||  |      
T  29503413 gaaaatcaattatttagattgaaatatagagaaaaatatgaagatgggtgatttcaggtcaagaattgacccaaaatcaccccctcgatgaaaaatctag 29503314  T
Q  100 aagaaaaaacctagagaaagaaaattagggccggcttgt 138  Q
    |||| ||||| |||| | |||||| ||||||||||||||    
T  29503313 aagagaaaacttagaaagagaaaactagggccggcttgt 29503275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 2 - 145
Target Start/End: Complemental strand, 37169180 - 37169039
Alignment:
Q  2 aaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgtaa 101  Q
    ||||||||||||||| |||||| || |||||||||| |||||||||||||||||| || || |||||| |||||| |||||||||||||||||| |        
T  37169180 aaaatcacttatttatattgaattagagagaaaaaggtgaagagaggtgatttcaggtaaaaaattgatccaaaatcacccctcaatgaagaaact---t 37169084  T
Q  102 gaaaaaacctagaga-aagaaaattagggccggcttgttggagag 145  Q
    ||||||||||||||| || |||| ||||||  ||||||| |||||    
T  37169083 gaaaaaacctagagagaaaaaaactagggctagcttgttagagag 37169039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 2 - 83
Target Start/End: Complemental strand, 22802971 - 22802890
Alignment:
Q  2 aaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccc 83  Q
    ||||||||||||||||||||||||| ||||||||||||||||||  ||||||||| ||||| ||||||||||||| ||||||    
T  22802971 aaaatcacttatttagattgaaatagagagaaaaagatgaagaggagtgatttcatgtcaaaaattgacccaaaatcacccc 22802890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 2 - 95
Target Start/End: Original strand, 36735277 - 36735370
Alignment:
Q  2 aaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaa 95  Q
    ||||||||||||||| ||||||||| ||||| ||| |||||||| | |||||||| || || |||||||| ||||||||| |||||||||||||    
T  36735277 aaaatcacttatttaaattgaaatatagagagaaaaatgaagagggatgatttcaggtaaaaaattgaccaaaaaccacctctcaatgaagaaa 36735370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 2 - 81
Target Start/End: Complemental strand, 46178526 - 46178447
Alignment:
Q  2 aaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacc 81  Q
    |||| ||||||||||||||||| || |||||||||||||||||| | |||||||| ||||  ||||||||||||||||||    
T  46178526 aaaagcacttatttagattgaattagagagaaaaagatgaagagggatgatttcaggtcataaattgacccaaaaccacc 46178447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 48 - 145
Target Start/End: Original strand, 47980839 - 47980935
Alignment:
Q  48 gtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgtaagaaaaaacctagagaaagaaaattagggccggcttgttggagag 145  Q
    ||||||||| ||||| |||||||||||||||||| ||||||||||||| || |||| |||||||||| | | ||||||||||  ||||| ||||||||    
T  47980839 gtgatttcaggtcaaaaattgacccaaaaccaccactcaatgaagaaactgcaagagaaaacctagacaga-aaaattagggtaggcttattggagag 47980935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 48 - 145
Target Start/End: Original strand, 47990126 - 47990222
Alignment:
Q  48 gtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgtaagaaaaaacctagagaaagaaaattagggccggcttgttggagag 145  Q
    ||||||||| ||||| |||||||||||||||||| ||||||||||||| || |||| |||||||||| | | ||||||||||  ||||| ||||||||    
T  47990126 gtgatttcaggtcaaaaattgacccaaaaccaccactcaatgaagaaactgcaagagaaaacctagacaga-aaaattagggtaggcttattggagag 47990222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 48 - 145
Target Start/End: Original strand, 47999413 - 47999509
Alignment:
Q  48 gtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgtaagaaaaaacctagagaaagaaaattagggccggcttgttggagag 145  Q
    ||||||||| ||||| |||||||||||||||||| ||||||||||||| || |||| |||||||||| | | ||||||||||  ||||| ||||||||    
T  47999413 gtgatttcaggtcaaaaattgacccaaaaccaccactcaatgaagaaactgcaagagaaaacctagacaga-aaaattagggtaggcttattggagag 47999509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 48 - 145
Target Start/End: Original strand, 48008700 - 48008796
Alignment:
Q  48 gtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgtaagaaaaaacctagagaaagaaaattagggccggcttgttggagag 145  Q
    ||||||||| ||||| |||||||||||||||||| ||||||||||||| || |||| |||||||||| | | ||||||||||  ||||| ||||||||    
T  48008700 gtgatttcaggtcaaaaattgacccaaaaccaccactcaatgaagaaactgcaagagaaaacctagacaga-aaaattagggtaggcttattggagag 48008796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 21488062 - 21487918
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacc-cctcaatgaagaaattgt 99  Q
    |||| ||||||||||||||||||||  |||||||||||||||||  |||||||||| ||||| |||||||  |||||  || ||||||| |||||  ||     
T  21488062 gaaagtcacttatttagattgaaatggagagaaaaagatgaagattggtgatttcaggtcaaaaattgacagaaaacttcctcctcaataaagaatatgg 21487963  T
Q  100 aagaaaaaacctagagaaagaaaattagggccggcttgttggaga 144  Q
    |||| ||||| |||||| |||||| || |  | ||||||||||||    
T  21487962 aagagaaaacttagagagagaaaactaagatcagcttgttggaga 21487918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 17237753 - 17237671
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccc 83  Q
    |||||||||||||||||||||||||| ||||||| |||||||||    |||||| | |||||||||||||| | |||||||||    
T  17237753 gaaaatcacttatttagattgaaatagagagaaacagatgaagatgaatgattttaggtcaagaattgacctagaaccacccc 17237671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 35 - 151
Target Start/End: Original strand, 30648898 - 30649012
Alignment:
Q  35 aagatgaagagaggtgatttcaagtcaagaattgacccaaaa-ccacccctcaatgaagaaattgtaagaaaaaacctagagaaagaaaattagggccgg 133  Q
    ||||||||||| |||| || || ||||| ||||||||||||| ||||||| |||||||||||  | |||| |||||||||||| | |||||||||||||     
T  30648898 aagatgaagaggggtg-ttccaggtcaaaaattgacccaaaaaccacccc-caatgaagaaacgg-aagagaaaacctagagagataaaattagggccga 30648994  T
Q  134 cttgttggagagggagag 151  Q
    ||||||||||| ||||||    
T  30648995 cttgttggagatggagag 30649012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 31794030 - 31793920
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgta 100  Q
    |||||||||||||||||||||||||| ||| |||| ||  ||||||| |||||| | || || || |||| ||||||||||| ||||| |||||| || |    
T  31794030 gaaaatcacttatttagattgaaatagagaaaaaatgacaaagagagatgatttaaggttaa-aaatgactcaaaaccacccgtcaataaagaaactgga 31793932  T
Q  101 agaaaaaaccta 112  Q
    ||| ||||||||    
T  31793931 agagaaaaccta 31793920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 10 - 95
Target Start/End: Complemental strand, 19605993 - 19605908
Alignment:
Q  10 ttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaa 95  Q
    |||||| |||||||||| || |||||| |||||||  || ||||||| ||||| | ||||||||||| ||||| ||||||||||||    
T  19605993 ttatttggattgaaatagagtgaaaaatatgaagaagggcgatttcatgtcaacatttgacccaaaatcacccttcaatgaagaaa 19605908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 33 - 79
Target Start/End: Original strand, 6823553 - 6823599
Alignment:
Q  33 aaaagatgaagagaggtgatttcaagtcaagaattgacccaaaacca 79  Q
    ||||||||||||| ||||||||||  |||||||||||||||||||||    
T  6823553 aaaagatgaagaggggtgatttcagatcaagaattgacccaaaacca 6823599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 42719471 - 42719406
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaat 66  Q
    |||||||||||||||| ||||||||| ||||||||| | |||||   ||||||||| |||||||||    
T  42719471 gaaaatcacttatttaaattgaaatagagagaaaaatacgaagatgagtgatttcaggtcaagaat 42719406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 150
Target Start/End: Complemental strand, 3606710 - 3606562
Alignment:
Q  2 aaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccaccc-ctcaatgaagaaattgta 100  Q
    ||||||||||||||||||| |||||  |||||| ||| |||||   |||||||||  | || ||||||| ||||  ||||| ||||||||||||| || |    
T  3606710 aaaatcacttatttagattaaaatagggagaaagagaagaagattagtgatttcagataaaaaattgacacaaatgcaccctctcaatgaagaaaatgga 3606611  T
Q  101 agaaaaaacctagagaaagaaaattagggccggcttgttggagagggaga 150  Q
    |||  ||||||| ||| ||  || ||| |||| ||| |||||||||||||    
T  3606610 agaggaaacctaaagatag-taactagagccgacttattggagagggaga 3606562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 151
Target Start/End: Original strand, 19222413 - 19222442
Alignment:
Q  122 aattagggccggcttgttggagagggagag 151  Q
    ||||||||||||||||||||||||||||||    
T  19222413 aattagggccggcttgttggagagggagag 19222442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 137; Significance: 5e-71; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 137; E-Value: 5e-71
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 25064188 - 25064036
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgta 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  25064188 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccacccctcaatgaagaaattgta 25064089  T
Q  101 agaaaaaacctagagaaagaaaattagggccggcttgttggagagggagagat 153  Q
    ||| |||||||||||| |||||| |||||||||||||||||||||||||||||    
T  25064088 agagaaaacctagagagagaaaactagggccggcttgttggagagggagagat 25064036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 117; E-Value: 4e-59
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 8496918 - 8496766
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgta 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| |||||||||||||||||||||||||||||    
T  8496918 gaaaatcacttatttagattgaaataaagagaaaaagatgaagaggggtgatttcaggtcaagaattgactcaaaaccacccctcaatgaagaaattgta 8496819  T
Q  101 agaaaaaacctagagaaagaaaattagggccggcttgttggagagggagagat 153  Q
    ||| |||||||||||| |||||| |||| ||| ||| ||||||||||||||||    
T  8496818 agagaaaacctagagagagaaaactaggaccgacttattggagagggagagat 8496766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 110; E-Value: 6e-55
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 12652893 - 12652744
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgta 100  Q
    |||||||||||||||||||||||||| |||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| |||     
T  12652893 gaaaatcacttatttagattgaaatagagagaaaaagatgaagaggggtgatttcaggtcaagaattgacccaaaaccacccctcaatgaagaaactgtg 12652794  T
Q  101 agaaaaaacctagagaaagaaaattagggccggcttgttggagagggaga 150  Q
    ||| |||||||||||| |||||| |||||||| |||||||||||| ||||    
T  12652793 agagaaaacctagagagagaaaactagggccgacttgttggagagagaga 12652744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 101; E-Value: 2e-49
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 23947441 - 23947589
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgta 100  Q
    |||||||||||||||||||||||||| |||||||| ||||||||  |||||||||| |||||||||||||||||||||||||||||||||||||| |  |    
T  23947441 gaaaatcacttatttagattgaaatagagagaaaacgatgaagatgggtgatttcaggtcaagaattgacccaaaaccacccctcaatgaagaaactaga 23947540  T
Q  101 agaaaaaacctagagaaagaaaattagggccggcttgttggagagggag 149  Q
    |||||||||||||||| |||||| ||||| |||||||||||| ||||||    
T  23947541 agaaaaaacctagagagagaaaactagggtcggcttgttggatagggag 23947589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 83; E-Value: 8e-39
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 7881227 - 7881321
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaa 95  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| |||||||||||||||||||||||||    
T  7881227 gaaaatcacttatttagattgaaataaagagaaaaagatgaagaaaggtgatttcaagtcaataattgatccaaaaccacccctcaatgaagaaa 7881321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 17334728 - 17334582
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgta 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||  ||||||||||  |||||||| || ||||||||| ||||||||||||||||||||    
T  17334728 gaaaatcacttatttagattgaaataaacagaaaaagatgaagattggtgatttcagatcaagaatcgatccaaaacca-ccctcaatgaagaaattgta 17334630  T
Q  101 agaaaaaacctagagaaagaaaattagggccggcttgttggagagggag 149  Q
    ||| |||| ||||||| |||||| ||||| ||| || ||||||||||||    
T  17334629 agagaaaatctagagagagaaaa-tagggtcggtttattggagagggag 17334582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 16419111 - 16418962
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgta 100  Q
    |||| ||||||||||||||||||||| |||||||||||||||||  |||||||| | || |||||||||| ||||||||||||  ||||||||||  | |    
T  16419111 gaaagtcacttatttagattgaaatagagagaaaaagatgaagatgggtgattttaggttaagaattgactcaaaaccacccc-aaatgaagaaacggga 16419013  T
Q  101 agaaaaaacctagagaaagaaaattagggccggcttgttggagagggagag 151  Q
     || |||||||||||| ||||||||| ||||||||||||||||||||||||    
T  16419012 tgagaaaacctagagagagaaaattaaggccggcttgttggagagggagag 16418962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 33109787 - 33109649
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgta 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||  |  ||||| | ||||| ||||||||||||||||||| |||||||||||| || |    
T  33109787 gaaaatcacttatttagattgaaataaagagaaaaagatgaagatggacgattttaggtcaaaaattgacccaaaaccacccgtcaatgaagaaactgga 33109688  T
Q  101 agaaaaaacctagagaaagaaaattagggccggcttgtt 139  Q
    ||| |||||||| | | |||||| |||||||||||||||    
T  33109687 agagaaaacctaaaaagagaaaactagggccggcttgtt 33109649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 6 - 145
Target Start/End: Complemental strand, 10228627 - 10228493
Alignment:
Q  6 tcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgtaagaaa 105  Q
    |||||||||||||||||| || ||||| |||||||||||| |||||||||| |||||||||||||||||||||||||| |||||||||||  | |||| |    
T  10228627 tcacttatttagattgaagtagagagagaaagatgaagaggggtgatttcaggtcaagaattgacccaaaaccacccc-caatgaagaaacgggaagaga 10228529  T
Q  106 aaacctagagaaagaaaattagggccggcttgttggagag 145  Q
    ||||||||||||     |||||||||||||||||||||||    
T  10228528 aaacctagagaag----attagggccggcttgttggagag 10228493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 33740702 - 33740796
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaa 95  Q
    |||||||||||||||||||||||||| |||||||||||||||||| |||||||| | |||||||||||||| |||||||||||||||||||||||    
T  33740702 gaaaatcacttatttagattgaaatagagagaaaaagatgaagaggggtgattttaggtcaagaattgaccaaaaaccacccctcaatgaagaaa 33740796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 17237408 - 17237496
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatg 89  Q
    |||||| ||||||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||    
T  17237408 gaaaataacttatttagattgaaatatagagaaaaagatgaagaggggtgatttcatgtcaagaattgacccaaaaccacccctcaatg 17237496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 4984702 - 4984812
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgta 100  Q
    |||||||||||||||||||||||||| |||||||| ||||||||   ||||||||| |||||||||||||||||||||||||||||||| ||||| ||||    
T  4984702 gaaaatcacttatttagattgaaatagagagaaaa-gatgaagatgagtgatttcaggtcaagaattgacccaaaaccacccctcaatggagaaactgta 4984800  T
Q  101 agaaaaaaccta 112  Q
    ||| ||||||||    
T  4984801 agagaaaaccta 4984812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 7876169 - 7876263
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaa 95  Q
    ||||||||||||||||||||||||||||||||||||||||||||  |||||||| | ||||| |||||| |||||||||||||||||||||||||    
T  7876169 gaaaatcacttatttagattgaaataaagagaaaaagatgaagatgggtgattttaggtcaataattgatccaaaaccacccctcaatgaagaaa 7876263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 8028242 - 8028391
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgta 100  Q
    |||||||||||||||||||||||| | |||||||||||||||| | ||||||| ||  |||| ||||||||||||| |||| ||||||||||||| ||||    
T  8028242 gaaaatcacttatttagattgaaacagagagaaaaagatgaagtggggtgattccagatcaataattgacccaaaatcacctctcaatgaagaaactgta 8028341  T
Q  101 agaaaaaacctagagaaagaaaattagggccggcttgttggagagggaga 150  Q
      | |||||||| ||| ||||| ||| || |||||||||| |||||||||    
T  8028342 ctagaaaacctaaagagagaaagttaaggtcggcttgttgaagagggaga 8028391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 4468512 - 4468371
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgta 100  Q
    |||||||||||||||||||||||||| |||||| ||||||||||| ||||| |||| ||||||||||||||||||| |         |||||||| ||||    
T  4468512 gaaaatcacttatttagattgaaatagagagaacaagatgaagaggggtgacttcatgtcaagaattgacccaaaatc--------gtgaagaaactgta 4468421  T
Q  101 agaaaaaacctagagaaagaaaattagggccggcttgttggagagggaga 150  Q
    ||||||||||||||||  ||||| ||| |||||||||||||| |||||||    
T  4468420 agaaaaaacctagagagtgaaaactagagccggcttgttggatagggaga 4468371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 8196531 - 8196675
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgta 100  Q
    |||||||||||||||||||||||||| ||||||||||||||| |  |||||||| | |||||||| ||| ||||||||| ||||||||||||||| ||||    
T  8196531 gaaaatcacttatttagattgaaatagagagaaaaagatgaatacgggtgattttaggtcaagaactgatccaaaacca-ccctcaatgaagaaactgta 8196629  T
Q  101 agaaaaaacctagagaaaga-aaattagggccggcttgttggagag 145  Q
      | |||| ||||||| ||| ||| || ||||||||||||||||||    
T  8196630 ccagaaaatctagagagagagaaactaaggccggcttgttggagag 8196675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 12165794 - 12165657
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgta 100  Q
    ||||||||||||||||||||||||||   | ||||||||||||||  ||||||||| ||||| |||||||||||||  || |||||||||||||| || |    
T  12165794 gaaaatcacttatttagattgaaataggcataaaaagatgaagaggagtgatttcaggtcaataattgacccaaaataactcctcaatgaagaaactgga 12165695  T
Q  101 agaaaaaacctagagaaagaaaattagggccggcttgt 138  Q
    ||| |||||| ||||| || |||||||| |||||||||    
T  12165694 agagaaaaccgagagagagtaaattaggaccggcttgt 12165657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 4088413 - 4088263
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaaga-tgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgt 99  Q
    ||||||||||||||||||||| |||| ||| ||||| | ||||||  |||||||||| ||||||||||||||||||||||||||||||| |||||  |||    
T  4088413 gaaaatcacttatttagattgtaatagagataaaaaaaatgaagatgggtgatttcaggtcaagaattgacccaaaaccacccctcaataaagaacctgt 4088314  T
Q  100 aagaaaaaacctagagaaagaaaattagggccggcttgttggagagggaga 150  Q
    || | ||||||||||||   ||||||| | |||  || |||||||||||||    
T  4088313 aaaagaaaacctagagatgaaaaattaagaccgatttattggagagggaga 4088263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 2 - 141
Target Start/End: Complemental strand, 34489202 - 34489061
Alignment:
Q  2 aaaatcacttatttagat--tgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgt 99  Q
    ||||||||||||||| ||  |||| || |||||||||||||||||| |||||||| ||||||| |||||| | ||||||||||||||   |||||| ||     
T  34489202 aaaatcacttatttatatattgaattagagagaaaaagatgaagaggggtgattttaagtcaaaaattgatcaaaaaccacccctcatccaagaaaatga 34489103  T
Q  100 aagaaaaaacctagagaaagaaaattagggccggcttgttgg 141  Q
    |||| |||||||||||| | |||| ||||| || ||||||||    
T  34489102 aagagaaaacctagagagaaaaaactagggtcgacttgttgg 34489061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 2 - 95
Target Start/End: Original strand, 33543744 - 33543838
Alignment:
Q  2 aaaatcacttatttagattgaaataaagagaaaaagatg-aagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaa 95  Q
    ||||| ||||||||||||||||||| ||||||||||||| ||||   ||||||||| ||||| || |||| |||||||||||||||| |||||||    
T  33543744 aaaattacttatttagattgaaatatagagaaaaagatgaaagatgagtgatttcaggtcaaaaactgactcaaaaccacccctcaacgaagaaa 33543838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 5582776 - 5582835
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtc 60  Q
    |||||||| ||||||||||| ||||| | |||||||||||||||| ||||||||||||||    
T  5582776 gaaaatcatttatttagattaaaatataaagaaaaagatgaagagtggtgatttcaagtc 5582835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 81
Target Start/End: Original strand, 23217124 - 23217194
Alignment:
Q  11 tatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacc 81  Q
    |||||| ||||||||| |||||||| ||||| || |||||||||| ||||||  |||||||||||||||||    
T  23217124 tatttaaattgaaatagagagaaaatgatgacgaaaggtgatttcgagtcaaatattgacccaaaaccacc 23217194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 28635249 - 28635327
Alignment:
Q  4 aatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccaccc 82  Q
    ||||||||||||| ||||||||||| ||||||| |||||||| | |||||| | ||||| ||||| ||||||| |||||    
T  28635249 aatcacttatttaaattgaaataaaaagaaaaatatgaagagggatgatttgaggtcaaaaattgtcccaaaatcaccc 28635327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 8266587 - 8266535
Alignment:
Q  2 aaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgattt 54  Q
    |||||||||||||||||||||| || ||||||||||||||||| | |||||||    
T  8266587 aaaatcacttatttagattgaagtagagagaaaaagatgaagacaagtgattt 8266535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 85
Target Start/End: Complemental strand, 1523332 - 1523250
Alignment:
Q  3 aaatcacttatttagattgaaa-taaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctc 85  Q
    ||||||||||||||||||||||  ||||||||||| ||| |||| |||||||  | ||||| |||||||| |||| ||||||||    
T  1523332 aaatcacttatttagattgaaagaaaagagaaaaaaatgcagag-ggtgattctaggtcaaaaattgacctaaaatcacccctc 1523250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 9508840 - 9508921
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccc 83  Q
    ||||||||||||||||||||||| |||| ||||||||  |||||  |||||||    ||||| |||||| |||||||||||||    
T  9508840 gaaaatcacttatttagattgaattaaaaagaaaaagtggaagaatggtgattatgggtcaa-aattgatccaaaaccacccc 9508921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 2 - 44
Target Start/End: Complemental strand, 25398518 - 25398476
Alignment:
Q  2 aaaatcacttatttagattgaaataaagagaaaaagatgaaga 44  Q
    ||||||||||||||||||||| | ||||| |||||||||||||    
T  25398518 aaaatcacttatttagattgagacaaagataaaaagatgaaga 25398476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 125; Significance: 7e-64; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 125; E-Value: 7e-64
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 9619482 - 9619634
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgta 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  9619482 gaaaatcacttatttagattgaaataaagagaaaaagatgaagaggggtgatttcaggtcaagaattgacccaaaaccacccctcaatgaagaaattgta 9619581  T
Q  101 agaaaaaacctagagaaagaaaattagggccggcttgttggagagggagagat 153  Q
    ||| |||| ||||||| |||||| ||| |||||||||||||||||||||||||    
T  9619582 agagaaaatctagagagagaaaactagagccggcttgttggagagggagagat 9619634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 105; E-Value: 6e-52
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 14907048 - 14907200
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgta 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||||||||||| |||||| || ||||||||||||||||||||    
T  14907048 gaaaatcacttatttagattgaaataaagagaaaaagatgaagatgggtgatttcaggtcaagaattgatccaaaatcatccctcaatgaagaaattgta 14907147  T
Q  101 agaaaaaacctagagaaagaaaattagggccggcttgttggagagggagagat 153  Q
    ||| |||||||||||| |||||| ||||| |||||| || |||||||||||||    
T  14907148 agagaaaacctagagagagaaaactagggtcggcttattagagagggagagat 14907200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 103; E-Value: 1e-50
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 9498726 - 9498863
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgta 100  Q
    |||||||||||||||||||||||||||||| |||||||||||||| |||||||||| || ||||||||||||||||||||||||||||||||||||||||    
T  9498726 gaaaatcacttatttagattgaaataaagataaaaagatgaagaggggtgatttcaggt-aagaattgacccaaaaccacccctcaatgaagaaattgta 9498824  T
Q  101 agaaaaaacctagagaaagaaaattagggccggcttgtt 139  Q
    ||| |||||||||||| |||||| |||||||| ||||||    
T  9498825 agagaaaacctagagagagaaaactagggccgacttgtt 9498863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 97; E-Value: 4e-47
Query Start/End: Original strand, 2 - 142
Target Start/End: Original strand, 43890250 - 43890390
Alignment:
Q  2 aaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgtaa 101  Q
    |||||||||||||||||||||| ||||||||||||||||||||| |||||||||| ||||| || ||| |||||||||||||||||||||||||||||||    
T  43890250 aaaatcacttatttagattgaattaaagagaaaaagatgaagaggggtgatttcaggtcaaaaaatgatccaaaaccacccctcaatgaagaaattgtaa 43890349  T
Q  102 gaaaaaacctagagaaagaaaattagggccggcttgttgga 142  Q
    || |||||||||||| |||||| |||||||| ||| |||||    
T  43890350 gagaaaacctagagagagaaaactagggccgacttattgga 43890390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 97; E-Value: 4e-47
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 44100056 - 44100200
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgta 100  Q
    |||||| ||||||||||||||||||| |||||||||||||||||| |||||||| | ||||||||| ||||||||||||||||||||||||||||  | |    
T  44100056 gaaaataacttatttagattgaaatatagagaaaaagatgaagaggggtgattttaggtcaagaatcgacccaaaaccacccctcaatgaagaaaccgaa 44100155  T
Q  101 agaaaaaacctagagaaagaaaattagggccggcttgttggagag 145  Q
    ||| |||||||||||| |||||| |||||||||||||||||||||    
T  44100156 agagaaaacctagagagagaaaactagggccggcttgttggagag 44100200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 11725642 - 11725507
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgta 100  Q
    ||||| |||||||||||||||||||||||||||||||| |||||| |||||||||| |||||||||||||||||||||||||||||||||||||| || |    
T  11725642 gaaaaacacttatttagattgaaataaagagaaaaagacgaagaggggtgatttcaggtcaagaattgacccaaaaccacccctcaatgaagaaactgaa 11725543  T
Q  101 agaaaaaacctagagaaagaaaattagggccggctt 136  Q
    ||| |||| ||||||| |||||| ||||||||||||    
T  11725542 agagaaaatctagagagagaaaactagggccggctt 11725507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 90; E-Value: 6e-43
Query Start/End: Original strand, 3 - 132
Target Start/End: Original strand, 42448154 - 42448283
Alignment:
Q  3 aaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgtaag 102  Q
    |||||||||||||||||||||||| |||||||||||||||||| |||||||||| |||||||||| ||||||||||||||||||||||  ||| ||||||    
T  42448154 aaatcacttatttagattgaaatagagagaaaaagatgaagaggggtgatttcaggtcaagaattaacccaaaaccacccctcaatgacaaaactgtaag 42448253  T
Q  103 aaaaaacctagagaaagaaaattagggccg 132  Q
    | |||||||||||| |||||| ||||||||    
T  42448254 acaaaacctagagagagaaaactagggccg 42448283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 11196850 - 11196704
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgta 100  Q
    ||||||||||||||||||||||||||  ||||||||||||||||  | |||||||| |||||||||||||||||||||||||||||| ||||||| |  |    
T  11196850 gaaaatcacttatttagattgaaata--gagaaaaagatgaagatggatgatttcaggtcaagaattgacccaaaaccacccctcaacgaagaaactaga 11196753  T
Q  101 agaaaaaacctagagaaagaaaattagggccggcttgttggagagggag 149  Q
    ||| |||| ||||||| |||||| ||||||| |||||||||||||||||    
T  11196752 agagaaaaactagagagagaaaactagggccagcttgttggagagggag 11196704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 2655829 - 2655717
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgta 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||  ||||||| || |||||||||||||||||||||||| ||||||||||||||||||    
T  2655829 gaaaatcacttatttagattgaaataaagagaaaaagatgaagatgggtgattgcaggtcaagaattgacccaaaaccaccgctcaatgaagaaattgta 2655730  T
Q  101 agaaaaaacctag 113  Q
    ||| |||| ||||    
T  2655729 agagaaaaactag 2655717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 4808924 - 4808816
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgta 100  Q
    |||||||||||||||| ||||||||||||| |||||||||||||| ||| |||||| |||||||||||||||||||||||||||||||||||||||||||    
T  4808924 gaaaatcacttatttacattgaaataaagaaaaaaagatgaagaggggtaatttcaggtcaagaattgacccaaaaccacccctcaatgaagaaattgta 4808825  T
Q  101 agaaaaaac 109  Q
    ||| |||||    
T  4808824 agagaaaac 4808816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 3 - 153
Target Start/End: Complemental strand, 44577994 - 44577846
Alignment:
Q  3 aaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgtaag 102  Q
    |||||||||| ||||||||||||| ||||||||||||||||||  ||||||| | ||||| ||||||||||||||||||||||||||||||||  |||||    
T  44577994 aaatcacttagttagattgaaatagagagaaaaagatgaagaggagtgattttaggtcaaaaattgacccaaaaccacccctcaatgaagaaacagtaag 44577895  T
Q  103 aaaaaacctagagaaagaaaattagggccggcttgttggagagggagagat 153  Q
    | |||||||||||  |||||| ||||||||  |||||||||||| ||||||    
T  44577894 agaaaacctagag--agaaaactagggccgtattgttggagaggaagagat 44577846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 2 - 150
Target Start/End: Complemental strand, 33342396 - 33342250
Alignment:
Q  2 aaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgtaa 101  Q
    |||||||||||||||||||||| || ||| |||| ||||||||| |||||||||| || || |||||||||||||||||||||||||||||||| |  ||    
T  33342396 aaaatcacttatttagattgaattagagaaaaaaggatgaagaggggtgatttcaggttaaaaattgacccaaaaccacccctcaatgaagaaactcgaa 33342297  T
Q  102 gaaaaaacctagagaaagaaaattagggccggcttgttggagagggaga 150  Q
    ||||||||||||||  |||||| ||||||||||||||| ||||| ||||    
T  33342296 gaaaaaacctagag--agaaaactagggccggcttgttagagagagaga 33342250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 29777181 - 29777041
Alignment:
Q  9 cttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgtaagaaaaaa 108  Q
    |||||||||||||||||| ||||||||||||||||||  ||||||||| ||||| ||||||||||||||||| |  |||||||||||  | | || ||||    
T  29777181 cttatttagattgaaatagagagaaaaagatgaagaggagtgatttcatgtcaataattgacccaaaaccactcaccaatgaagaaacaggatgagaaaa 29777082  T
Q  109 cctagagaaagaaaattagggccggcttgttggagagggag 149  Q
    |||||||| ||||||||||||||| ||||||||||||||||    
T  29777081 cctagagagagaaaattagggccgacttgttggagagggag 29777041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 9072677 - 9072527
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgta 100  Q
    |||| ||||||||||| ||||||||| |||||||||||||||||| |||||||||||||||| |||||||||||||||||||| |||||||||||    |    
T  9072677 gaaagtcacttatttaaattgaaatagagagaaaaagatgaagaggggtgatttcaagtcaaaaattgacccaaaaccaccccccaatgaagaaacgaga 9072578  T
Q  101 agaaaaaacctagagaaagaaaattagggccggcttgttggagagggagag 151  Q
     || |||| ||||||| |||||||||||| ||| ||| |||| ||||||||    
T  9072577 tgagaaaatctagagagagaaaattagggtcggtttgctggaaagggagag 9072527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 19876172 - 19876029
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgta 100  Q
    ||||||||||||||||||||||||||  ||||||||||||||||   || |||||| |||||||||||||||||||||||||||||||  ||||| |  |    
T  19876172 gaaaatcacttatttagattgaaatattgagaaaaagatgaagatgagtaatttcaggtcaagaattgacccaaaaccacccctcaat--agaaaat-ca 19876076  T
Q  101 agaaaaaacctagagaaagaaaattagggccggcttgttggagagggag 149  Q
    ||| |||||||||||  ||||||||||||||||||||||||||||||||    
T  19876075 agagaaaacctagag--agaaaattagggccggcttgttggagagggag 19876029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 2 - 129
Target Start/End: Complemental strand, 28239792 - 28239665
Alignment:
Q  2 aaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaacca-cccctcaatgaagaaattgta 100  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||||||| || |||||||||||||||| || |    
T  28239792 aaaaacacttatttagattgaaatagagagaaaaagatgaagagaggtgatttcaggtcaaaaattgacccaaaatcaccccctcaatgaagaaaatgga 28239693  T
Q  101 agaaaaaacctagagaaagaaaattaggg 129  Q
    ||| |||||||||||| | ||||||||||    
T  28239692 agagaaaacctagagaga-aaaattaggg 28239665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 32724613 - 32724764
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaatt-gacccaaaaccacccc-tcaatgaagaaattg 98  Q
    |||||||||||||||||||||||||| |||||||| |||||||||| ||||||||| ||||| |||| |||||||||||||||| |||||| ||||| ||    
T  32724613 gaaaatcacttatttagattgaaatagagagaaaa-gatgaagagaagtgatttcaggtcaataatttgacccaaaaccaccccctcaatggagaaactg 32724711  T
Q  99 taagaaaaaacctagagaaagaaaattagggccggcttgttggagagggagag 151  Q
    ||||| |||||| ||||| |||||| ||||| || ||||||||||||| ||||    
T  32724712 taagagaaaacccagagagagaaaactagggtcgacttgttggagaggtagag 32724764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 35580418 - 35580286
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccaccc-ctcaatgaagaaattgt 99  Q
    |||||||||||||||| ||||||||| |||||||||||||||||   ||||||| | ||||| ||||||||||||||||||| ||||||||||||||||     
T  35580418 gaaaatcacttatttaaattgaaatagagagaaaaagatgaagatgagtgattttatgtcaaaaattgacccaaaaccaccctctcaatgaagaaattgg 35580319  T
Q  100 aagaaaaaacctagagaaagaaaattagggccg 132  Q
    ||||||||||||| ||| | |||||||||||||    
T  35580318 aagaaaaaacctaaagagaaaaaattagggccg 35580286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 17949207 - 17949085
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgta 100  Q
    ||||||| |||||||||||||||||| |||||||||| ||||||| |||||||||| ||||| ||||||||||||| ||||| |||||||||||| ||||    
T  17949207 gaaaatcgcttatttagattgaaatagagagaaaaaggtgaagaggggtgatttcaggtcaataattgacccaaaatcacccatcaatgaagaaactgta 17949108  T
Q  101 agaaaaaacctagagaaagaaaa 123  Q
    ||| | |||||||||| ||||||    
T  17949107 agagacaacctagagagagaaaa 17949085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 33896041 - 33895907
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgta 100  Q
    |||| ||||||||||||||| ||||| |||||||||||||||||| ||||| || |  ||||||||||||||||||||||||| |||||||||||    |    
T  33896041 gaaagtcacttatttagatttaaatagagagaaaaagatgaagaggggtgactttagatcaagaattgacccaaaaccacccc-caatgaagaaacgcga 33895943  T
Q  101 agaaaaaacctagagaaagaaaattagggccggctt 136  Q
    ||| |||||||||||| |||||||||||||||||||    
T  33895942 agagaaaacctagagagagaaaattagggccggctt 33895907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 11464130 - 11464004
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgta 100  Q
    |||||||||||||| | |||||||||||||||| ||  ||||||| |||||||||| |||||||||||||| |||||||||||| |||||||||||||||    
T  11464130 gaaaatcacttattcaaattgaaataaagagaagaa--tgaagaggggtgatttcaggtcaagaattgacctaaaaccaccccttaatgaagaaattgta 11464033  T
Q  101 agaaaaaacctagagaaagaaaattaggg 129  Q
    ||| |||||  | ||| ||||||||||||    
T  11464032 agagaaaactcaaagagagaaaattaggg 11464004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 34611764 - 34611652
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgta 100  Q
    |||||||||||||||||| ||||||| | ||||||| |||||||   ||||||||| |||||||||||||||||||||||||||| ||||||||| ||||    
T  34611764 gaaaatcacttatttagactgaaatagaaagaaaaatatgaagatgagtgatttcaggtcaagaattgacccaaaaccacccctcgatgaagaaactgta 34611665  T
Q  101 agaaaaaacctag 113  Q
    ||| |||| ||||    
T  34611664 agagaaaaactag 34611652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 27747236 - 27747351
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgta 100  Q
    |||||| ||||||||| ||||||||  ||| |||||||||||||  |||||||||||||||| |||||||||||||| |||||| ||||||||| ||| |    
T  27747236 gaaaattacttatttaaattgaaatggagataaaaagatgaagaatggtgatttcaagtcaaaaattgacccaaaactaccccttaatgaagaagttgga 27747335  T
Q  101 agaaaaaacctagaga 116  Q
    ||| ||||||||||||    
T  27747336 agagaaaacctagaga 27747351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 2 - 145
Target Start/End: Complemental strand, 16794252 - 16794110
Alignment:
Q  2 aaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgtaa 101  Q
    |||||||||||||||||||||| || |||||||||||||||||  |||||||||||||||| ||||||   ||||||| || ||||| |||||| || ||    
T  16794252 aaaatcacttatttagattgaattagagagaaaaagatgaagatgggtgatttcaagtcaaaaattgattaaaaacca-ccttcaataaagaaactgaaa 16794154  T
Q  102 gaaaaaacctagagaaagaaaattagggccggcttgttggagag 145  Q
     | |||| ||||||| | |||| |||  ||||||| ||||||||    
T  16794153 aagaaaatctagagacaaaaaactagcaccggctttttggagag 16794110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 15597290 - 15597419
Alignment:
Q  1 gaaaatcacttatttagattgaaataaag-agaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgt 99  Q
    |||||||||||||||||||||||||  |  |||||||||||||||| |||||||||| ||||| |||||||  |||||||||||||||| || | | ||     
T  15597290 gaaaatcacttatttagattgaaatggactagaaaaagatgaagaggggtgatttcaggtcaaaaattgactgaaaaccacccctcaataaaaatactgg 15597389  T
Q  100 aagaaaaaacctagagaaagaaaattaggg 129  Q
    |||| |||||||| ||| | |||| |||||    
T  15597390 aagagaaaacctatagagaaaaaactaggg 15597419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 30 - 132
Target Start/End: Complemental strand, 15046824 - 15046721
Alignment:
Q  30 agaaaaagatgaagagaggtgatttcaagtcaagaattga-cccaaaaccacccctcaatgaagaaattgtaagaaaaaacctagagaaagaaaattagg 128  Q
    |||||||||||||||||||||||||||  |||| |||||| ||||||| |||||||||||||||||| |  |||| |||| ||| ||| | |||| ||||    
T  15046824 agaaaaagatgaagagaggtgatttcatatcaaaaattgaccccaaaatcacccctcaatgaagaaacttgaagagaaaatctaaagagaaaaaaatagg 15046725  T
Q  129 gccg 132  Q
    ||||    
T  15046724 gccg 15046721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 103
Target Start/End: Complemental strand, 12173455 - 12173361
Alignment:
Q  7 cacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgtaaga 103  Q
    ||||||||| |||||||||| ||| |||||||| ||||  |||||||||| ||||| | |||||||||||||| ||||| ||||||||| |||||||    
T  12173455 cacttattttgattgaaatagaga-aaaaagataaagatgggtgatttcaggtcaaaagttgacccaaaacca-ccctcgatgaagaaaatgtaaga 12173361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 103
Target Start/End: Complemental strand, 12417883 - 12417789
Alignment:
Q  7 cacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgtaaga 103  Q
    ||||||||| |||||||||| ||| |||||||| ||||  |||||||||| ||||| | |||||||||||||| ||||| ||||||||| |||||||    
T  12417883 cacttattttgattgaaatagaga-aaaaagataaagatgggtgatttcaggtcaaaagttgacccaaaacca-ccctcgatgaagaaaatgtaaga 12417789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 12184245 - 12184135
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgta 100  Q
    ||||| ||||||||||||||||||||  ||||||||||| |  |||| |||||||  ||||| | |||||||||||||||| |||||| |||| | || |    
T  12184245 gaaaaacacttatttagattgaaata--gagaaaaagataattagag-tgatttcgggtcaaaagttgacccaaaaccacctctcaataaagacaatgaa 12184149  T
Q  101 agaaaaaacctaga 114  Q
    ||| | ||||||||    
T  12184148 agagataacctaga 12184135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 12428673 - 12428563
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgta 100  Q
    ||||| ||||||||||||||||||||  ||||||||||| |  |||| |||||||  ||||| | |||||||||||||||| |||||| |||| | || |    
T  12428673 gaaaaacacttatttagattgaaata--gagaaaaagataattagag-tgatttcgggtcaaaagttgacccaaaaccacctctcaataaagacaatgaa 12428577  T
Q  101 agaaaaaacctaga 114  Q
    ||| | ||||||||    
T  12428576 agagataacctaga 12428563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 37566003 - 37566079
Alignment:
Q  1 gaaaatcacttatttagattgaaataaaga-gaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaa 76  Q
    |||||||| ||||||||||||||||| |||  ||||| |||||||  ||||||||||  |||| |||||||||||||    
T  37566003 gaaaatcaattatttagattgaaatagagataaaaaaaatgaagaagggtgatttcagatcaataattgacccaaaa 37566079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 2 - 44
Target Start/End: Complemental strand, 18733980 - 18733938
Alignment:
Q  2 aaaatcacttatttagattgaaataaagagaaaaagatgaaga 44  Q
    ||||||| ||||||| ||||||||| |||||||||||||||||    
T  18733980 aaaatcaattatttaaattgaaatagagagaaaaagatgaaga 18733938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 31013730 - 31013817
Alignment:
Q  1 gaaaatcacttatttagattgaaataaa---gagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctc 85  Q
    ||||| |||||||||||||||||| |||   | |||||||||| |||| |||||||  | ||||| || ||||| |||||||||||||    
T  31013730 gaaaaccacttatttagattgaaagaaaagggggaaaaagatgtagaggggtgattctaggtcaaaaaatgacctaaaaccacccctc 31013817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 121; Significance: 2e-61; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 121; E-Value: 2e-61
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 46821967 - 46821819
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgta 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| ||||| ||    
T  46821967 gaaaatcacttatttagattgaaataaagagaaaaagatgaagaggggtgatttcaggtcaagaattgacccaaaaccacccctcaatgaaaaaattata 46821868  T
Q  101 agaaaaaacctagagaaagaaaattagggccggcttgttggagagggag 149  Q
    ||| |||||||||||| |||||| |||||||||||||||||||||||||    
T  46821867 agagaaaacctagagagagaaaactagggccggcttgttggagagggag 46821819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 120; E-Value: 7e-61
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 2843351 - 2843506
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgta 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||||||||||||||||||||| |||||||||||||||||    
T  2843351 gaaaatcacttatttagattgaaataaagagaaaaagatgaagaggggtgttttcaggtcaagaattgacccaaaaccacccttcaatgaagaaattgta 2843450  T
Q  101 agaaaaaacctagagaaagaaaattagggccggcttgttggagagggagagattct 156  Q
    ||| |||||||||||| |||||| |||| ||| |||||||||||||||||||||||    
T  2843451 agagaaaacctagagagagaaaactaggaccgccttgttggagagggagagattct 2843506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 118; E-Value: 1e-59
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 26583667 - 26583514
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgta 100  Q
    |||||||||||||||||||||||||| ||| |||||||||||||| |||||||||| |||||||||||||| ||||||||||||||||||||||| ||||    
T  26583667 gaaaatcacttatttagattgaaatagagataaaaagatgaagaggggtgatttcaggtcaagaattgaccaaaaaccacccctcaatgaagaaactgta 26583568  T
Q  101 agaaaaaacctagagaaagaaaattagggccggcttgttggagagggagagatt 154  Q
    |||||||||||||| | |||||| ||||||||||||||||||||||||||||||    
T  26583567 agaaaaaacctagaaagagaaaactagggccggcttgttggagagggagagatt 26583514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 111; E-Value: 2e-55
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 21266345 - 21266195
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgta 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| |||||| || |    
T  21266345 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcatgtcaataattgacccaaaaccacccctcaataaagaaactgga 21266246  T
Q  101 agaaaaaacctagagaaagaaaattagggccggcttgttggagagggagag 151  Q
    ||||||||| || ||| |||||| |||||||||||| ||||||||||||||    
T  21266245 agaaaaaacttaaagagagaaaactagggccggcttattggagagggagag 21266195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 102; E-Value: 4e-50
Query Start/End: Original strand, 5 - 150
Target Start/End: Complemental strand, 42311229 - 42311084
Alignment:
Q  5 atcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgtaagaa 104  Q
    |||||||||||||||||||||| |||||||| ||||||||| | |||||||| ||||||||||||||||||||||||||||| |||||||| | |||||     
T  42311229 atcacttatttagattgaaatagagagaaaatgatgaagagggatgatttcaggtcaagaattgacccaaaaccacccctcagtgaagaaactctaagag 42311130  T
Q  105 aaaacctagagaaagaaaattagggccggcttgttggagagggaga 150  Q
    |||||||||||| |||||||||||| ||||||||||||||||||||    
T  42311129 aaaacctagagagagaaaattagggtcggcttgttggagagggaga 42311084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 26492318 - 26492172
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgta 100  Q
    |||||||||||||||| ||||||||| |||||||||||||||||| ||| |||||| |||||||||||||||||||||||||||||||||||||| ||||    
T  26492318 gaaaatcacttatttaaattgaaatagagagaaaaagatgaagaggggttatttcaggtcaagaattgacccaaaaccacccctcaatgaagaaactgta 26492219  T
Q  101 agaaaaaacctagagaaagaaaattagggccggcttgttggagaggg 147  Q
    ||| |||| ||||||| | |||| |||||||||||| ||||||||||    
T  26492218 agacaaaatctagagagataaaactagggccggcttattggagaggg 26492172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 97; E-Value: 4e-47
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 22927994 - 22928138
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgta 100  Q
    |||| ||||||||||||||||||||| ||||||||||||||| || |||||||||| ||||||||||||||||||||||||||  ||||||||||  | |    
T  22927994 gaaagtcacttatttagattgaaatagagagaaaaagatgaaaaggggtgatttcaggtcaagaattgacccaaaaccaccccctaatgaagaaacggga 22928093  T
Q  101 agaaaaaacctagagaaagaaaattagggccggcttgttggagag 145  Q
    ||| |||||||||||| ||||||||||||||||||||||||||||    
T  22928094 agagaaaacctagagagagaaaattagggccggcttgttggagag 22928138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 95; E-Value: 6e-46
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 32684638 - 32684485
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgta 100  Q
    |||||||||||||||||||||||||| |||||||| |||||||| | ||||||||| ||||||||||||||||||||||||||||||||||||||  |||    
T  32684638 gaaaatcacttatttagattgaaatagagagaaaacgatgaagacatgtgatttcaggtcaagaattgacccaaaaccacccctcaatgaagaaaccgta 32684539  T
Q  101 agaaaaaacctagagaaagaaaat--tagggccggcttgttggagagggagaga 152  Q
    ||| |||||||||||| ||| |    ||||||||||||||||||||||||||||    
T  32684538 agagaaaacctagagagagagagagctagggccggcttgttggagagggagaga 32684485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 90; E-Value: 6e-43
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 1448953 - 1449098
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgta 100  Q
    |||||||||||||||||||||||||| ||||||| ||||||||   ||| |||||| ||||||||||||||||||||||||||||||  |||||  || |    
T  1448953 gaaaatcacttatttagattgaaatagagagaaagagatgaagtttggttatttcaggtcaagaattgacccaaaaccacccctcaacaaagaatctgga 1449052  T
Q  101 agaaaaaacctagagaaagaaaattagggccggcttgttggagagg 146  Q
    |||||||||||||||| |||||| ||||||||||||||||||||||    
T  1449053 agaaaaaacctagagagagaaaactagggccggcttgttggagagg 1449098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 23085474 - 23085325
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagagg-tgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgt 99  Q
    |||| ||| ||||||||||||||||| | |||||||||||||||| || |||||||||||||| |||||||||||||||||||| |||||||||||  |     
T  23085474 gaaagtcaattatttagattgaaatagaaagaaaaagatgaagagggggtgatttcaagtcaataattgacccaaaaccacccc-caatgaagaaacgg- 23085377  T
Q  100 aagaaaaaacctagagaaagaaaattagggccggcttgttggagagggagag 151  Q
    |||| |||||||||||| |||||||||||| |||||||||||||||||||||    
T  23085376 aagagaaaacctagagagagaaaattagggtcggcttgttggagagggagag 23085325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 35496299 - 35496426
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgta 100  Q
    |||||||||||| ||||||||||||| |||||||||||||||||  |||||||| | ||||||||||||||||||||||||||||||||||||||  |||    
T  35496299 gaaaatcacttaattagattgaaatagagagaaaaagatgaagattggtgattttaggtcaagaattgacccaaaaccacccctcaatgaagaaacagta 35496398  T
Q  101 agaaaaaacctagagaaagaaaattagg 128  Q
    ||| |||||||| ||| |||||||||||    
T  35496399 agagaaaacctaaagagagaaaattagg 35496426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 1485380 - 1485521
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgta 100  Q
    |||| ||||||||||||||||||||| |||||||||||||||||  |||||||| | |||||||||| ||||||||||||||| |||||||||||  | |    
T  1485380 gaaagtcacttatttagattgaaatagagagaaaaagatgaagacgggtgattttaggtcaagaattaacccaaaaccaccccccaatgaagaaacggga 1485479  T
Q  101 agaaaaaacctagagaaagaaaattagggccggcttgttggaga 144  Q
    ||| |||||||||||  ||||||||||||||| |||||||||||    
T  1485480 agagaaaacctagag--agaaaattagggccgacttgttggaga 1485521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 20116536 - 20116388
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgta 100  Q
    |||||||||||||||||||||||||| | |||||||||||||||  |||||||||| ||||| |||||||||||||| |||||||| |||||||| |  |    
T  20116536 gaaaatcacttatttagattgaaatagatagaaaaagatgaagaagggtgatttcaggtcaaaaattgacccaaaactacccctcattgaagaaacttga 20116437  T
Q  101 agaaaaaacctagagaaagaaaattagggccggcttgttggagagggag 149  Q
    ||| ||||| |||||| |||||| |||||||| ||||||||||| ||||    
T  20116436 agagaaaacatagagagagaaaactagggccgacttgttggagaaggag 20116388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 35667355 - 35667502
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgta 100  Q
    |||||||||||||||||||||||||| ||||||||| |||||||  |||||||| |||||||||||||| ||||||||||||||||||||| |||||  |    
T  35667355 gaaaatcacttatttagattgaaatagagagaaaaatatgaagaagggtgattttaagtcaagaattgatccaaaaccacccctcaatgaaaaaattaga 35667454  T
Q  101 agaaaaaacctagagaaagaaaattagggccggcttgttggagagggag 149  Q
    ||| ||||| || | |||||||| |||||||| ||||||||||| ||||    
T  35667455 agagaaaactta-aaaaagaaaactagggccgacttgttggagaaggag 35667502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 46339006 - 46338898
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgta 100  Q
    |||||||||||||||| |||||||||||||||||||||||||||| | | |||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  46339006 gaaaatcacttatttacattgaaataaagagaaaaagatgaagagggataatttcaggtcaagaattgacccaaaactacccctcaatgaagaaattgta 46338907  T
Q  101 agaaaaaac 109  Q
    ||| |||||    
T  46338906 agagaaaac 46338898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 44 - 151
Target Start/End: Original strand, 12539122 - 12539229
Alignment:
Q  44 agaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgtaagaaaaaacctagagaaagaaaattagggccggcttgttggag 143  Q
    ||||||||||||| |||||||||||||| ||||||||||||||||||||||| || |||| |||| ||||||| |||||| ||||| |||||||||||||    
T  12539122 agaggtgatttcaggtcaagaattgaccaaaaaccacccctcaatgaagaaactggaagagaaaatctagagagagaaaactagggtcggcttgttggag 12539221  T
Q  144 agggagag 151  Q
    ||||||||    
T  12539222 agggagag 12539229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 2 - 85
Target Start/End: Original strand, 23425496 - 23425579
Alignment:
Q  2 aaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctc 85  Q
    ||||||||||||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||    
T  23425496 aaaatcacttatttagattgaaatatagagaaaaagatgaagaggggtgatttcaggtcaagaattgacccaaaaccacccctc 23425579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 2 - 129
Target Start/End: Original strand, 31235917 - 31236044
Alignment:
Q  2 aaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccac-ccctcaatgaagaaattgta 100  Q
    ||||||||||||||||||||||||| |||||||||||||||||| || ||||||| ||||| ||||||||||||| ||| ||||||||||||||| || |    
T  31235917 aaaatcacttatttagattgaaatagagagaaaaagatgaagaggggagatttcatgtcaaaaattgacccaaaatcactccctcaatgaagaaaatgga 31236016  T
Q  101 agaaaaaacctagagaaagaaaattaggg 129  Q
    ||| |||| ||||||| | ||||||||||    
T  31236017 agagaaaatctagagaga-aaaattaggg 31236044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 42067184 - 42067272
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatg 89  Q
    |||||||||||||||||||||||||| ||| || |||||||||||||||||||||| ||||||||||||||||||| ||||| ||||||    
T  42067184 gaaaatcacttatttagattgaaatatagataacaagatgaagagaggtgatttcaggtcaagaattgacccaaaatcacccttcaatg 42067272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 433816 - 433944
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgta 100  Q
    |||| ||| ||||||||||||||||| ||||||||||||||| || | |||||||| ||||| |||||||||||||||||||  |||||||||||    |    
T  433816 gaaagtcatttatttagattgaaatagagagaaaaagatgaaaagggatgatttcaggtcaaaaattgacccaaaaccaccc--caatgaagaaaccaga 433913  T
Q  101 agaaaaaacctagagaaagaaaattagggcc 131  Q
    ||| |||||||||||||||||||||| ||||    
T  433914 agagaaaacctagagaaagaaaattaaggcc 433944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 14628003 - 14628135
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagag-aggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgt 99  Q
    ||||||||||||||||||||||| || ||| |||||||||||||| |||| |||||  || || | ||||||||||||||||| |||||||||| | |||    
T  14628003 gaaaatcacttatttagattgaattagagaaaaaaagatgaagaggaggtaatttccggtaaaaatttgacccaaaaccacccttcaatgaagacactgt 14628102  T
Q  100 aagaaaaaacctagagaaagaaaattagggccg 132  Q
    |||||||||| ||||||  ||||| ||||||||    
T  14628103 aagaaaaaacttagagagcgaaaactagggccg 14628135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 48207855 - 48207775
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccaccc 82  Q
    ||||||||||||||||||||||||||  ||||||||||||||||| |||||||||| |||||||| ||||||||||||||||    
T  48207855 gaaaatcacttatttagattgaaatattgagaaaaagatgaagaggggtgatttcaggtcaagaa-tgacccaaaaccaccc 48207775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 42408315 - 42408225
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaa 91  Q
    ||||| || |||||||||||||||||||||||||||||||||||  | |||||||| |||||||| ||||| ||||||| |||||||||||    
T  42408315 gaaaaacaattatttagattgaaataaagagaaaaagatgaagatggatgatttcaggtcaagaactgaccaaaaaccatccctcaatgaa 42408225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 6001973 - 6001862
Alignment:
Q  2 aaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccc-tcaatgaagaaattgta 100  Q
    ||||||||||||||||||| |||||  ||||||||||||||||  |||||||||| ||||| |||||| |||||| |||||| ||||| |||||| || |    
T  6001973 aaaatcacttatttagattaaaatagggagaaaaagatgaagatgggtgatttcaggtcaaaaattgatccaaaatcaccccttcaataaagaaaatgga 6001874  T
Q  101 agaaaaaaccta 112  Q
    ||| ||||||||    
T  6001873 agagaaaaccta 6001862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 3860905 - 3860828
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaacc 78  Q
    |||||||||||||||| ||||||| |||||||||||||| |||||| |||||||||||| || ||||||| |||||||    
T  3860905 gaaaatcacttatttatattgaaacaaagagaaaaagataaagagatgtgatttcaagttaaaaattgacacaaaacc 3860828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 32522050 - 32522198
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagaga-----aaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaa 95  Q
    |||||||||||||||| ||||||||| |||||     ||||||||||||  |||||||||| ||||| | | |||| ||||||| ||||||||||||||     
T  32522050 gaaaatcacttatttaaattgaaatagagagagaaaaaaaagatgaagatgggtgatttcaggtcaa-attcgacctaaaaccatccctcaatgaagaag 32522148  T
Q  96 ttgtaagaaaaaacctagagaaagaaaattagggccggcttgttggagag 145  Q
    ||| |||| ||||||||||||   |||| || ||||| ||||||||||||    
T  32522149 ttggaagagaaaacctagagaggaaaaactaaggccgacttgttggagag 32522198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 45199155 - 45199243
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatg 89  Q
    |||||||||||||||| ||| ||||| |||||||||||||||||  |||||||||| ||||| | |||| |||||||||||||| ||||    
T  45199155 gaaaatcacttatttaaattaaaatatagagaaaaagatgaagatgggtgatttcaggtcaatagttgatccaaaaccacccctgaatg 45199243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 36143819 - 36143711
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgta 100  Q
    ||||| ||||||||||||||||| || |||||||||||||||||  | | |||||| || || | |||| ||||||| ||||||||||||| |||  | |    
T  36143819 gaaaaacacttatttagattgaattagagagaaaaagatgaagatggataatttcacgttaaaatttgatccaaaacaacccctcaatgaaaaaacggaa 36143720  T
Q  101 agaaaaaac 109  Q
    |||||||||    
T  36143719 agaaaaaac 36143711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 58 - 112
Target Start/End: Complemental strand, 6558813 - 6558758
Alignment:
Q  58 gtcaagaattgacccaaaacca-cccctcaatgaagaaattgtaagaaaaaaccta 112  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||| ||||||||    
T  6558813 gtcaagaattgacccaaaaccaccccctcaatgaaaaaattgtaagagaaaaccta 6558758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 30 - 87
Target Start/End: Complemental strand, 17611055 - 17610998
Alignment:
Q  30 agaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaa 87  Q
    |||||||||||||||| |||||||||| ||||  |||||||| |||||||||||||||    
T  17611055 agaaaaagatgaagaggggtgatttcaggtcataaattgacctaaaaccacccctcaa 17610998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 116
Target Start/End: Complemental strand, 20083276 - 20083169
Alignment:
Q  9 cttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaacca-cccctcaatgaagaaattgtaagaaaaa 107  Q
    |||||||||||||||||| | |||||||||||||||| ||| |||| | ||||| |||| ||| ||||||| ||||||| |||||||| || | || |||    
T  20083276 cttatttagattgaaatagaaagaaaaagatgaagagtggt-attttaggtcaaaaattaacctaaaaccaccccctcattgaagaaactggacgagaaa 20083178  T
Q  108 acctagaga 116  Q
    | |||||||    
T  20083177 atctagaga 20083169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 1749305 - 1749389
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagag-aaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctc 85  Q
    |||||||||||||||||||||||| |||| | |||||||||||| | |||||||  | ||||| |||||||| |||| ||||||||    
T  1749305 gaaaatcacttatttagattgaaagaaagggaaaaaagatgaagcg-ggtgattctaggtcaaaaattgacctaaaatcacccctc 1749389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 5546312 - 5546277
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaa 36  Q
    |||||||||||||||||||||||||| |||||||||    
T  5546312 gaaaatcacttatttagattgaaatagagagaaaaa 5546277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 95
Target Start/End: Original strand, 17499797 - 17499864
Alignment:
Q  28 agagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaa 95  Q
    |||||||||||||||||   ||||||| | || ||  ||||||||||||| |||||||||||||||||    
T  17499797 agagaaaaagatgaagatgagtgattttaggttaaatattgacccaaaactacccctcaatgaagaaa 17499864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 95
Target Start/End: Complemental strand, 17553417 - 17553350
Alignment:
Q  28 agagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaa 95  Q
    |||||||||||||||||   ||||||| | || ||  ||||||||||||| |||||||||||||||||    
T  17553417 agagaaaaagatgaagatgagtgattttaggttaaatattgacccaaaactacccctcaatgaagaaa 17553350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 24351005 - 24351091
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaa--gatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctc 85  Q
    |||||||||||||||||||||||| |||| ||||||  |||| | || |||||||  | ||||| |||||||| |||| ||||||||    
T  24351005 gaaaatcacttatttagattgaaagaaagggaaaaaaggatgcacaggggtgattctaggtcaaaaattgacctaaaatcacccctc 24351091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 35132880 - 35132794
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagag--aaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctc 85  Q
    |||||||||||||||||||| ||| |||| |  ||||||||| |||| |||||||  | ||||| |||||||| |||| ||||||||    
T  35132880 gaaaatcacttatttagattaaaagaaaggggaaaaaagatgtagaggggtgattctaggtcaaaaattgacctaaaatcacccctc 35132794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 35261251 - 35261156
Alignment:
Q  1 gaaaatcacttatttagattgaaataaag-agaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaa 95  Q
    ||||||||||||||| |||||||||  |  |||||||||||||||  |||||||| | ||||| ||||| |||||||| |||  |||| |||||||    
T  35261251 gaaaatcacttatttggattgaaatggactagaaaaagatgaagatgggtgattttaggtcaaaaattggcccaaaactaccattcaacgaagaaa 35261156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 19404916 - 19405001
Alignment:
Q  1 gaaaatcacttatttagattgaaataaa--gagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccct 84  Q
    ||||| |||||||||||||||||| |||  || ||||||||| |||| |||||||  | ||||| || ||||| ||||||||||||    
T  19404916 gaaaaccacttatttagattgaaagaaaaggaaaaaaagatgtagaggggtgattctaggtcaaaaaatgacctaaaaccacccct 19405001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 120; Significance: 7e-61; HSPs: 44)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 120; E-Value: 7e-61
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 30371680 - 30371525
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgta 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||  ||||||||||||||||||||||||||||||||||||    
T  30371680 gaaaatcacttatttagattgaaataaagagaaaaagatgaagaggggtgatttcaggtcaaatattgacccaaaaccacccctcaatgaagaaattgta 30371581  T
Q  101 agaaaaaacctagagaaagaaaattagggccggcttgttggagagggagagattct 156  Q
    ||| |||||||||| | |||||| |||||||| |||||||||||||||||||||||    
T  30371580 agagaaaacctagatagagaaaactagggccgacttgttggagagggagagattct 30371525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 34881665 - 34881515
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgta 100  Q
    |||||||||||||||||||||||||| |||||||| |||||||||||||||||||| |||||||||||||||| ||||||||||||||| ||||| ||||    
T  34881665 gaaaatcacttatttagattgaaatagagagaaaa-gatgaagagaggtgatttcaggtcaagaattgacccagaaccacccctcaatggagaaactgta 34881567  T
Q  101 agaaaaaacctagagaaagaaaattagggccggcttgttggagagggagaga 152  Q
    ||| ||||||| |||| |||||| |||||||| |||||||||||||||||||    
T  34881566 agagaaaacctggagagagaaaactagggccgacttgttggagagggagaga 34881515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 93; E-Value: 9e-45
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 36344613 - 36344757
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgta 100  Q
    |||||| ||||||||||||||||||| |||||||||||||||||| |||||||| | ||||||||| ||| ||||||||||||||||||||||||||| |    
T  36344613 gaaaataacttatttagattgaaatatagagaaaaagatgaagaggggtgattttaggtcaagaatcgactcaaaaccacccctcaatgaagaaattgga 36344712  T
Q  101 agaaaaaacctagagaaagaaaattagggccggcttgttggagag 145  Q
    ||| |||| ||||||| | ||||||||||||| ||||||||||||    
T  36344713 agagaaaatctagagagaaaaaattagggccgacttgttggagag 36344757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 7241738 - 7241600
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgta 100  Q
    |||| ||||||||||||||||||||| |||||||||||||||||| |||| ||||| || ||||||||||||||||||||||| |||||||||||  | |    
T  7241738 gaaagtcacttatttagattgaaatagagagaaaaagatgaagaggggtggtttcaggttaagaattgacccaaaaccaccccccaatgaagaaacggga 7241639  T
Q  101 agaaaaaacctagagaaagaaaattagggccggcttgtt 139  Q
    ||| |||||||||||| ||||||||||||||||||||||    
T  7241638 agagaaaacctagagagagaaaattagggccggcttgtt 7241600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 7246914 - 7246776
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgta 100  Q
    |||| ||||||||||||||||||||| |||||||||||||||||| |||| ||||| || ||||||||||||||||||||||| |||||||||||  | |    
T  7246914 gaaagtcacttatttagattgaaatagagagaaaaagatgaagaggggtggtttcaggttaagaattgacccaaaaccaccccccaatgaagaaacggga 7246815  T
Q  101 agaaaaaacctagagaaagaaaattagggccggcttgtt 139  Q
    ||| |||||||||||| ||||||||||||||||||||||    
T  7246814 agagaaaacctagagagagaaaattagggccggcttgtt 7246776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 88; E-Value: 9e-42
Query Start/End: Original strand, 10 - 145
Target Start/End: Original strand, 41184578 - 41184712
Alignment:
Q  10 ttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgtaagaaaaaac 109  Q
    ||||||||||||||||| |||||||| ||||||||  |||||||||| ||||| ||||||||||||| || ||||||||| ||||| ||||||| |||||    
T  41184578 ttatttagattgaaatagagagaaaa-gatgaagaatggtgatttcatgtcaaaaattgacccaaaatcatccctcaatggagaaactgtaagagaaaac 41184676  T
Q  110 ctagagaaagaaaattagggccggcttgttggagag 145  Q
    ||||||||||||||||||||||||||||||||||||    
T  41184677 ctagagaaagaaaattagggccggcttgttggagag 41184712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 88; E-Value: 9e-42
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 42579836 - 42579683
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaaga---tgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaatt 97  Q
    |||||||||||||||||||||||||| | ||||||| |   |||| || |||||||||| ||||| |||||||||||||||||||||||||| ||||| |    
T  42579836 gaaaatcacttatttagattgaaatagaaagaaaaaaaaaatgaaaaggggtgatttcatgtcaataattgacccaaaaccacccctcaatggagaaact 42579737  T
Q  98 gtaagaaaaaacctagagaaagaaaattagggccggcttgttggagagggagag 151  Q
    |||||| |||||||||||| |||||| |||||| ||||||||||||||||||||    
T  42579736 gtaagagaaaacctagagagagaaaactagggcgggcttgttggagagggagag 42579683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 19281068 - 19281218
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgta 100  Q
    |||| ||||||||||||||||||||| |||||||||||||||||  |||||||||  ||||| |||| ||||||||||||||| |||||||||||  | |    
T  19281068 gaaagtcacttatttagattgaaatagagagaaaaagatgaagatgggtgatttccggtcaaaaatttacccaaaaccaccccccaatgaagaaacggga 19281167  T
Q  101 agaaaaaacctagagaaagaaaattagggccggcttgttggagagggagag 151  Q
     || |||||||||||| ||||||||||||||| ||||||||||||||||||    
T  19281168 tgagaaaacctagagagagaaaattagggccgacttgttggagagggagag 19281218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 27266984 - 27267125
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgta 100  Q
    |||||||||||||||||||||||||| ||||||||| |||||||| |||||||||| ||||||||||||||||||||||||| ||  ||||||||  | |    
T  27266984 gaaaatcacttatttagattgaaatagagagaaaaatatgaagaggggtgatttcaggtcaagaattgacccaaaaccacccttcggtgaagaaacggga 27267083  T
Q  101 agaaaaaacctagagaaagaaaattagggccggcttgttgga 142  Q
    ||| |||||||||||| |||||| |||||||| |||||||||    
T  27267084 agagaaaacctagagagagaaaactagggccgacttgttgga 27267125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 26578205 - 26578058
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgta 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||   ||||||||| |||||||||||||| ||||||| || ||||| |||||||||||    
T  26578205 gaaaatcacttatttagattgaaataaagagaaaaagatgaagatgagtgatttcaggtcaagaattgaccaaaaaccatccatcaataaagaaattgta 26578106  T
Q  101 agaaaaaacctagagaaagaaaattagggccggcttgttggagagggag 149  Q
    ||| |||| || |||| |||||| ||||| | |||||||||||||||||    
T  26578105 agagaaaatctggagagagaaaactagggtc-gcttgttggagagggag 26578058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 2 - 150
Target Start/End: Original strand, 19259938 - 19260081
Alignment:
Q  2 aaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgtaa 101  Q
    ||||||||||||||||||||||||| |||||||||||   |  | |||||||||| |||||||||||||||||||||||||||||| |||||||  ||||    
T  19259938 aaaatcacttatttagattgaaatagagagaaaaaga---attggggtgatttcaggtcaagaattgacccaaaaccacccctcaacgaagaaaccgtaa 19260034  T
Q  102 gaaaaaacctagagaaagaaaattagggccggcttgttggagagggaga 150  Q
    || |||||||||||  |||||||||||||||||||||||||| ||||||    
T  19260035 gagaaaacctagag--agaaaattagggccggcttgttggagtgggaga 19260081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 7887061 - 7887209
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgta 100  Q
    |||||||||||||||||||| ||||| |||| |||||| |||||| | |||||||| ||||||||| |||||||||||||||||| ||||||||| || |    
T  7887061 gaaaatcacttatttagattaaaatagagaggaaaagacgaagagggatgatttcaggtcaagaatggacccaaaaccacccctcgatgaagaaactgga 7887160  T
Q  101 agaaaaaacctagagaaagaaaattagggccggcttgttggagagggag 149  Q
    ||| ||||  |||| | |||||| |||||||||||||||||||||||||    
T  7887161 agagaaaagttagaaagagaaaactagggccggcttgttggagagggag 7887209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 10649409 - 10649317
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaaga 93  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| ||||||||||||||||    
T  10649409 gaaaatcacttatttagattgaaataaagagaaaaagatgaagaggggtgatttcaggtcaagaattgacccaaaatcacccctcaatgaaga 10649317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 18677590 - 18677720
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgta 100  Q
    |||||||||||||||||||| ||||| |||||||||||||||||| | ||||||||  |||| ||||||||||||||||||||||||||||||||  |||    
T  18677590 gaaaatcacttatttagattaaaatagagagaaaaagatgaagagggatgatttcagatcaataattgacccaaaaccacccctcaatgaagaaacggta 18677689  T
Q  101 agaaaaaacctagagaaagaaaattagggcc 131  Q
    | | |||||||||||  ||||||||||||||    
T  18677690 aaagaaaacctagagggagaaaattagggcc 18677720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 43261941 - 43262091
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgta 100  Q
    |||||||||||||||||||||||||| ||| |||||||||||||  |||||||||| || |||||||||| ||||| |||| ||||||||| ||||||      
T  43261941 gaaaatcacttatttagattgaaatagagataaaaagatgaagatgggtgatttcaggttaagaattgactcaaaatcacctctcaatgaaaaaattgat 43262040  T
Q  101 agaaaaaacctagagaaagaaaattagggccggcttgttggagagggagag 151  Q
    ||  |||||||||||| |||||| |||| |||||||||| |||||||||||    
T  43262041 agtgaaaacctagagagagaaaactaggaccggcttgttagagagggagag 43262091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 21060405 - 21060542
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgta 100  Q
    |||||||||||||||||||||||||| |||||||||||||||||| ||||||||||  ||||||||||||||||||||||| ||| ||||| ||  |  |    
T  21060405 gaaaatcacttatttagattgaaatatagagaaaaagatgaagagtggtgatttcagatcaagaattgacccaaaaccaccactcgatgaaaaatctaga 21060504  T
Q  101 agaaaaaacctagagaaagaaaattagggccggcttgt 138  Q
    ||| |||||||||||| |||||| ||||| || |||||    
T  21060505 agagaaaacctagagagagaaaactagggtcgccttgt 21060542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 3271532 - 3271661
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgta 100  Q
    |||||||||||||||||||||||| | |||||||| |||||||||  ||||||||| |||||||||||||| |||| ||||| |||||||||||| | ||    
T  3271532 gaaaatcacttatttagattgaaacagagagaaaa-gatgaagaggagtgatttcatgtcaagaattgacctaaaatcaccc-tcaatgaagaaactata 3271629  T
Q  101 agaaaaaacctagagaaagaaaattagggccg 132  Q
    ||||||||  |||||| |||||||||||||||    
T  3271630 agaaaaaatttagagagagaaaattagggccg 3271661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 3 - 109
Target Start/End: Complemental strand, 16981244 - 16981138
Alignment:
Q  3 aaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgtaag 102  Q
    |||||||||||||||||||||||| ||||||||| ||||||||  ||||||||| |||||||||||| |||| |||||||||||||||||||| || |||    
T  16981244 aaatcacttatttagattgaaatagagagaaaaatatgaagaggagtgatttcaggtcaagaattgatccaataccacccctcaatgaagaaaatggaag 16981145  T
Q  103 aaaaaac 109  Q
    | |||||    
T  16981144 agaaaac 16981138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 28235541 - 28235427
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgta 100  Q
    ||||||||||||||||||| |||||| | |||||||||||||||| |||||||||| |||||  |||||||||||||||||||||||| |||||| || |    
T  28235541 gaaaatcacttatttagatcgaaatagaaagaaaaagatgaagaggggtgatttcaggtcaatgattgacccaaaaccacccctcaataaagaaactgga 28235442  T
Q  101 agaaaaaacctagag 115  Q
    ||| |||| ||||||    
T  28235441 agagaaaatctagag 28235427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 7150459 - 7150586
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgta 100  Q
    |||| ||||||||||||||||||||| |||||||||||||||||| |||||||||| ||||| |||| | ||||||||| |||  ||||||||||  | |    
T  7150459 gaaagtcacttatttagattgaaatagagagaaaaagatgaagaggggtgatttcaggtcaaaaattaatccaaaaccatccccgaatgaagaaacggga 7150558  T
Q  101 agaaaaaacctagagaaagaaaattagg 128  Q
    ||| |||||||||||| |||||| ||||    
T  7150559 agagaaaacctagagagagaaaactagg 7150586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 781345 - 781264
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccaccc 82  Q
    |||||||||||||||||||||||||| |||||||||||||||||  |||||||||| |||||||||||| ||||||||||||    
T  781345 gaaaatcacttatttagattgaaatatagagaaaaagatgaagatgggtgatttcaggtcaagaattgaaccaaaaccaccc 781264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 35475460 - 35475548
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatg 89  Q
    |||||||||||||||||||||||||| ||| || ||||||||||||||||||||||  ||||||||| |||||||| ||||||||||||    
T  35475460 gaaaatcacttatttagattgaaatatagataacaagatgaagagaggtgatttcagatcaagaattaacccaaaatcacccctcaatg 35475548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 11767762 - 11767651
Alignment:
Q  2 aaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaa-ttgta 100  Q
    ||||||||||||||||||||||||| ||||||||||||||||| || |||||| | ||||| |||||||| ||||||||| | ||||||||||| ||| |    
T  11767762 aaaatcacttatttagattgaaatatagagaaaaagatgaagacagatgattttaggtcaaaaattgacctaaaaccaccacacaatgaagaaacttgga 11767663  T
Q  101 agaaaaaaccta 112  Q
    ||| ||||||||    
T  11767662 agagaaaaccta 11767651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 2 - 127
Target Start/End: Complemental strand, 6445891 - 6445766
Alignment:
Q  2 aaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgtaa 101  Q
    ||||||||||||||| ||| | ||| |||||||| ||||||||  |||||||| |||| || ||||||| ||||||||||||||||| ||||||| | ||    
T  6445891 aaaatcacttatttaaattaagatagagagaaaacgatgaagatgggtgattttaagttaaaaattgactcaaaaccacccctcaataaagaaatggaaa 6445792  T
Q  102 gaaaaaacctagagaaagaaaattag 127  Q
    ||| ||| ||||| ||||||||||||    
T  6445791 gaataaatctagaaaaagaaaattag 6445766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 32 - 148
Target Start/End: Complemental strand, 27751840 - 27751723
Alignment:
Q  32 aaaaagatgaagag-aggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgtaagaaaaaacctagagaaagaaaattagggc 130  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| | || |   |||| |||||||| |||  ||||| ||||||    
T  27751840 aaaaagatgaagaggaggtgatttcaggtcaagaattgacccaaaaccacccctcaatggaaaattaagaagagaaaacctatagagggaaaactagggc 27751741  T
Q  131 cggcttgttggagaggga 148  Q
    ||||||| ||||||||||    
T  27751740 cggcttgctggagaggga 27751723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 2057962 - 2058027
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaat 66  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||| | |||||||||    
T  2057962 gaaaatcacttatttagattgaaataaagagaaaaagatgaagaggggtgattttaggtcaagaat 2058027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 11192322 - 11192178
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccc-tcaatgaagaaattgt 99  Q
    ||||||||||||||||| |||| ||| ||| |||||||| || | ||||||||||| ||||| |||||||||||||||||||| ||||||| || | |      
T  11192322 gaaaatcacttatttag-ttgatatagagacaaaaagattaatataggtgatttcaggtcaaaaattgacccaaaaccaccccttcaatgatgagaatag 11192224  T
Q  100 aagaaaaaacctagagaaagaaaattagggccggcttgttggagag 145  Q
    |||| | || ||||||||||| || |||| ||| ||||||||||||    
T  11192223 aagagagaaactagagaaagagaactaggaccgacttgttggagag 11192178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 20257818 - 20257908
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaa 91  Q
    |||||||||||||||||||||||||| ||||||||||| | |||  | |||||||| ||||| |||||||| ||||| ||||||| |||||    
T  20257818 gaaaatcacttatttagattgaaatagagagaaaaagaagtagatggatgatttcaggtcaaaaattgaccaaaaactacccctcgatgaa 20257908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 14211157 - 14211076
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccaccc 82  Q
    |||||||||||||||||||||||| |||| |||||||||| |||| |||||||  | ||||| |||||||| |||| |||||    
T  14211157 gaaaatcacttatttagattgaaagaaagggaaaaagatgcagaggggtgattctaggtcaaaaattgacctaaaatcaccc 14211076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 95
Target Start/End: Complemental strand, 15570864 - 15570771
Alignment:
Q  2 aaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaa 95  Q
    |||||||  ||||||||||||| || |||||||||||||||||| | |||||||||||||| || |||| ||||  ||||||| ||| ||||||    
T  15570864 aaaatcaaatatttagattgaattatagagaaaaagatgaagagggatgatttcaagtcaaaaactgactcaaagtcaccccttaataaagaaa 15570771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 2979474 - 2979560
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagag--aaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctc 85  Q
    |||||||||||||||||||||||| ||||||  ||||||||| |||| |||||||  | ||||| |||||||| |||| ||||||||    
T  2979474 gaaaatcacttatttagattgaaagaaagaggaaaaaagatgcagaggggtgattataggtcaaaaattgacctaaaatcacccctc 2979560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 41 - 135
Target Start/End: Complemental strand, 4953998 - 4953902
Alignment:
Q  41 aagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgtaag---aaaaaacctagagaaagaaaattagggccggct 135  Q
    ||||| ||||||| ||||||||||||||||||||||||||||| ||||||| |||  | |||   | |||||||||||| |||||||||| |||||||    
T  4953998 aagaggggtgattccaagtcaagaattgacccaaaaccacccc-caatgaaaaaacggaaagagaagaaaacctagagagagaaaattagagccggct 4953902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 96
Target Start/End: Complemental strand, 33029776 - 33029710
Alignment:
Q  31 gaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacc-cctcaatgaagaaat 96  Q
    ||||||||||||||  ||||||||| |||||| |||||||||||||||||| |||||||||| ||||    
T  33029776 gaaaaagatgaagacgggtgatttcgagtcaaaaattgacccaaaaccaccacctcaatgaaaaaat 33029710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 42432203 - 42432287
Alignment:
Q  3 aaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaat 88  Q
    ||||||||| |||  ||||||| | ||||||||| |||||||||||||||||| |||||| ||||||   ||||||||||||||||    
T  42432203 aaatcactttttttaattgaaaaagagagaaaaatatgaagagaggtgatttcgagtcaa-aattgattgaaaaccacccctcaat 42432287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 42432856 - 42432745
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaacca-cccctcaatgaagaaattgt 99  Q
    |||| |||||| |||||||||||||| ||||||||| || ||||||||||||||  | |||| ||||||   ||||||| ||||||||| || ||| ||     
T  42432856 gaaattcacttttttagattgaaatagagagaaaaatataaagagaggtgattttgaatcaa-aattgattgaaaaccaccccctcaataaaaaaaatgg 42432758  T
Q  100 aagaaaaaaccta 112  Q
    |||||||||||||    
T  42432757 aagaaaaaaccta 42432745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 8088374 - 8088436
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagag-aaaaagatgaagagaggtgatttcaagtcaa 62  Q
    ||||||||||||||||||| |||| |||||| ||||||||| |||||||||| |||| |||||    
T  8088374 gaaaatcacttatttagatcgaaagaaagagaaaaaagatgcagagaggtgacttcaggtcaa 8088436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 28097108 - 28097027
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccc 83  Q
    |||||||||||||||| ||||||||  || ||||| ||||||||  ||||| |||| ||||| ||||||| ||||||||||||    
T  28097108 gaaaatcacttatttatattgaaattgagcgaaaa-gatgaagatgggtgaattcaggtcaaaaattgacacaaaaccacccc 28097027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 31802598 - 31802678
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccc 83  Q
    ||||||| |||||||||||||||||||| ||| ||| ||||| ||| || ||||||||| || |||||| |||||||||||||    
T  31802598 gaaaatcccttatttagattgaaataaatagagaaa-atgaaaaga-gtaatttcaagttaaaaattgatccaaaaccacccc 31802678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 39567222 - 39567136
Alignment:
Q  1 gaaaatcacttatttagattgaaataaa--gagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctc 85  Q
    |||||||||||||||||||||||| |||  | |||||||||| ||||  ||||||  | ||||| |||||||| |||| ||||||||    
T  39567222 gaaaatcacttatttagattgaaagaaagggggaaaaagatgcagaggcgtgattctaggtcaaaaattgacctaaaatcacccctc 39567136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 5 - 62
Target Start/End: Original strand, 27576477 - 27576535
Alignment:
Q  5 atcacttatttagattgaaataaagagaaaaagatgaag-agaggtgatttcaagtcaa 62  Q
    |||||||||||| ||||||||| |||||||| ||||||| ||||| ||||||| |||||    
T  27576477 atcacttatttacattgaaatagagagaaaaggatgaagaagaggcgatttcaggtcaa 27576535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 30298164 - 30298130
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaa 35  Q
    |||||||||||||||||||||||||| ||||||||    
T  30298164 gaaaatcacttatttagattgaaatatagagaaaa 30298130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 38549153 - 38549207
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttc 55  Q
    |||||| | ||||||||||||||||  ||| ||||||||||||| ||||||||||    
T  38549153 gaaaattagttatttagattgaaattgagataaaaagatgaagataggtgatttc 38549207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 6012299 - 6012386
Alignment:
Q  1 gaaaatcacttatttagattgaaataaa---gagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctc 85  Q
    ||||| |||||||||||||||||| |||   || ||||||||| |||| |||||||  | ||||| || ||||| |||||||||||||    
T  6012299 gaaaaacacttatttagattgaaagaaaagggaaaaaaagatgtagaggggtgattctatgtcaaaaaatgacctaaaaccacccctc 6012386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 38007283 - 38007198
Alignment:
Q  1 gaaaatcacttatttagattgaaataaa-gagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctc 85  Q
    ||||| |||||||||| ||||||| ||| | |||||||||| |||| |||||||  | ||||| || ||||| |||||||||||||    
T  38007283 gaaaaccacttatttaaattgaaagaaaagggaaaaagatgtagaggggtgattcgaggtcaaaaaatgacctaaaaccacccctc 38007198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 119; Significance: 3e-60; HSPs: 48)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 119; E-Value: 3e-60
Query Start/End: Original strand, 1 - 155
Target Start/End: Complemental strand, 30420634 - 30420480
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgta 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| |||||| ||||||||||||||||||||||||||||||    
T  30420634 gaaaatcacttatttagattgaaataaagagaaaaagatgaagaggggtgatttcaggtcaaaaattgatccaaaaccacccctcaatgaagaaattgta 30420535  T
Q  101 agaaaaaacctagagaaagaaaattagggccggcttgttggagagggagagattc 155  Q
    | |||||||||||||| |||| | |||||||||||||||||||||||||| ||||    
T  30420534 aaaaaaaacctagagagagaagactagggccggcttgttggagagggagaaattc 30420480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 113; E-Value: 1e-56
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 36233962 - 36233814
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgta 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| |||||||||||||||||||||||||||||||||||| |    
T  36233962 gaaaatcacttatttagattgaaataaagagaaaaagatgaagaggggtgatttcaggtcatgaattgacccaaaaccacccctcaatgaagaaattgca 36233863  T
Q  101 agaaaaaacctagagaaagaaaattagggccggcttgttggagagggag 149  Q
    ||| |||| ||||||| |||||| |||||||| ||||||||||||||||    
T  36233862 agagaaaatctagagagagaaaactagggccgacttgttggagagggag 36233814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 110; E-Value: 6e-55
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 2808594 - 2808743
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgta 100  Q
    |||||||||||||||||| ||||||| ||||||| |||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| || |    
T  2808594 gaaaatcacttatttagactgaaatagagagaaatagatgaagaggggtgatttcaggtcaagaattgacccaaaaccacccctcaatgaagaaaatgaa 2808693  T
Q  101 agaaaaaacctagagaaagaaaattagggccggcttgttggagagggaga 150  Q
    |||||||||||||| ||||||||||||||||| |||| ||||||||||||    
T  2808694 agaaaaaacctagaaaaagaaaattagggccgacttgatggagagggaga 2808743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 107; E-Value: 4e-53
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 27249275 - 27249421
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgta 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||| |||||||||||||||||| |||||||||||||||||    
T  27249275 gaaaatcacttatttagattgaaataaagagaaaaagatgaagaggggtgatttcaggtcaagtattgacccaaaaccacccttcaatgaagaaattgta 27249374  T
Q  101 agaaaaaacctagagaaagaaaattagggccggcttgttggagaggg 147  Q
    ||| |||||||||||| |||||| ||   ||||||||||||||||||    
T  27249375 agagaaaacctagagagagaaaactaaaaccggcttgttggagaggg 27249421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 107; E-Value: 4e-53
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 45128161 - 45128012
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgta 100  Q
    |||| |||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||| |||||||||||||||| | |    
T  45128161 gaaagtcacttatttagattgaaataaagagaaaaagatgaagaggggtgatttcaggtcaagaattgacccaaaacca-ccctcaatgaagaaatggga 45128063  T
Q  101 agaaaaaacctagagaaagaaaattagggccggcttgttggagagggagag 151  Q
    ||| |||||||||||| ||||||||||| ||||||| ||||||||||||||    
T  45128062 agagaaaacctagagagagaaaattaggaccggcttattggagagggagag 45128012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 103; E-Value: 1e-50
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 34598945 - 34598795
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaaga-gaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgt 99  Q
    |||||||||||||||||||||||||| ||||||||||||||||| ||| |||||| | |||||||||||| ||||||||||||||||| |||||||  ||    
T  34598945 gaaaatcacttatttagattgaaatagagagaaaaagatgaagatgagttgatttgaggtcaagaattgatccaaaaccacccctcaacgaagaaacggt 34598846  T
Q  100 aagaaaaaacctagagaaagaaaattagggccggcttgttggagagggaga 150  Q
    |||| |||||||||||| |||||||||||||||||||||||||||||||||    
T  34598845 aagagaaaacctagagagagaaaattagggccggcttgttggagagggaga 34598795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 97; E-Value: 4e-47
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 6173589 - 6173445
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgta 100  Q
    |||||||||||||||||||||||||| |||||||||||||||||| |||||||||| ||||||||| |||| |||||||||||||||||||||||  |||    
T  6173589 gaaaatcacttatttagattgaaatagagagaaaaagatgaagaggggtgatttcaggtcaagaatagaccgaaaaccacccctcaatgaagaaaccgta 6173490  T
Q  101 agaaaaaacctagagaaagaaaattagggccggcttgttggagag 145  Q
    | | |||||||||||| |||||| ||||| |||||||||||||||    
T  6173489 aaagaaaacctagagagagaaaactagggtcggcttgttggagag 6173445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 97; E-Value: 4e-47
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 21570532 - 21570676
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgta 100  Q
    |||||||||||||||||||||||||| |||||||||||||||||| |||||||||| |||||||||||||||||||||||| ||||||||| ||  || |    
T  21570532 gaaaatcacttatttagattgaaatatagagaaaaagatgaagaggggtgatttcaggtcaagaattgacccaaaaccaccactcaatgaaaaatctgga 21570631  T
Q  101 agaaaaaacctagagaaagaaaattagggccggcttgttggagag 145  Q
    ||| |||||||||||| |||||| |||||||| ||||||||||||    
T  21570632 agagaaaacctagagacagaaaactagggccgccttgttggagag 21570676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 90; E-Value: 6e-43
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 41712889 - 41713038
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgta 100  Q
    |||||||||||||||||||| ||||| |||||||| |||||| |  |||||||||| |||||||||| ||||||||||||||||||||||||||||||||    
T  41712889 gaaaatcacttatttagattaaaatagagagaaaatgatgaaaatgggtgatttcacgtcaagaattaacccaaaaccacccctcaatgaagaaattgta 41712988  T
Q  101 agaaaaaacctagagaaagaaaattagggccggcttgttggagagggaga 150  Q
    ||| |||||||||| | |||||| ||||| |||||| |||||||| ||||    
T  41712989 agagaaaacctagatagagaaaactagggtcggcttattggagagtgaga 41713038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 8971750 - 8971877
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagag--aaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattg 98  Q
    |||||||||||||||||||| ||||||||||  |||||||||||||| | |||||||| |||||||||||||||||||||||||||||||||||||| ||    
T  8971750 gaaaatcacttatttagattaaaataaagagagaaaaagatgaagagggatgatttcaggtcaagaattgacccaaaaccacccctcaatgaagaaactg 8971849  T
Q  99 taagaaaaaacctagagaaagaaaatta 126  Q
    |||||||||||||| ||| |||||||||    
T  8971850 taagaaaaaacctaaagagagaaaatta 8971877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 3270352 - 3270501
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgta 100  Q
    |||||||||||||||||||||||||||| ||||||||||||| |   ||||||||| ||||||||||||||||||||||||||||||||||||||| |||    
T  3270352 gaaaatcacttatttagattgaaataaaaagaaaaagatgaaaatgagtgatttcaggtcaagaattgacccaaaaccacccctcaatgaagaaatcgta 3270451  T
Q  101 agaaaaaacctagagaaagaaaattagggccggcttgttggagagggaga 150  Q
    ||| ||||| |||||| | |||| || |||   |||||||||||||||||    
T  3270452 agagaaaacttagagagaaaaaactaaggctcacttgttggagagggaga 3270501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 9986469 - 9986612
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaaga--tgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattg 98  Q
    ||||||||||||||||||||||| || ||| ||||| |  ||||||| | |||||||| |||||||||||||||||||||||||||||||||||||| ||    
T  9986469 gaaaatcacttatttagattgaattagagataaaaaaaattgaagagggatgatttcaggtcaagaattgacccaaaaccacccctcaatgaagaaactg 9986568  T
Q  99 taagaaaaaacctagagaaagaaaattagggccggcttgttgga 142  Q
    ||||| |||||||||||| |||||| ||||| |||||| |||||    
T  9986569 taagagaaaacctagagagagaaaactagggtcggcttattgga 9986612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 6 - 144
Target Start/End: Original strand, 20047211 - 20047348
Alignment:
Q  6 tcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgtaagaaa 105  Q
    ||||||||||||||||||| | ||||||||||||||| || |||||||||| |||||||||||| ||||||| ||||| |||||||||||  |||||| |    
T  20047211 tcacttatttagattgaaaaagagagaaaaagatgaatag-ggtgatttcaggtcaagaattgatccaaaactaccccccaatgaagaaacggtaagaga 20047309  T
Q  106 aaacctagagaaagaaaattagggccggcttgttggaga 144  Q
    ||||||||||| ||||||||| ||||| |||||||||||    
T  20047310 aaacctagagagagaaaattatggccgtcttgttggaga 20047348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 18 - 150
Target Start/End: Original strand, 33229129 - 33229261
Alignment:
Q  18 attgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgtaagaaaaaacctagagaa 117  Q
    ||||||||| ||| ||||||||||||||||||||||| |  |||| ||||||||||||||||||| ||||||||||||  |||||| ||||||||||||     
T  33229129 attgaaatagagaaaaaaagatgaagagaggtgattttagctcaataattgacccaaaaccacccttcaatgaagaaacagtaagagaaaacctagagag 33229228  T
Q  118 agaaaattagggccggcttgttggagagggaga 150  Q
    || ||| ||||||||||||||| ||||||||||    
T  33229229 aggaaactagggccggcttgtttgagagggaga 33229261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 7015834 - 7015941
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgta 100  Q
    |||||||| |||||||||||||||||||||||||||||| | ||| |||||||||| |||||||||||||||||||||| ||| ||||||||||||||||    
T  7015834 gaaaatcaattatttagattgaaataaagagaaaaagattaggaggggtgatttcaggtcaagaattgacccaaaaccaacccccaatgaagaaattgta 7015933  T
Q  101 agaaaaaa 108  Q
    ||| ||||    
T  7015934 agagaaaa 7015941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 40626151 - 40626282
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgta 100  Q
    ||||||| |||||||||||||||||| ||||||||||| |||||| |||||||||| ||||||||| ||||||||| ||||||||||| |||||| || |    
T  40626151 gaaaatcccttatttagattgaaatagagagaaaaagacgaagaggggtgatttcaggtcaagaatagacccaaaatcacccctcaattaagaaaatgga 40626250  T
Q  101 agaaaaaacctagagaaagaaaattagggccg 132  Q
    ||| |||||||| ||| |||||| ||||||||    
T  40626251 agagaaaacctaaagagagaaaactagggccg 40626282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 27477112 - 27476962
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgta 100  Q
    |||||| ||||||||||||||||||| |||||||||||||||||| |||||||||| ||||| |||||||||||||||| ||||||||  | ||     |    
T  27477112 gaaaattacttatttagattgaaatatagagaaaaagatgaagaggggtgatttcatgtcaataattgacccaaaaccatccctcaatagaaaatcaaga 27477013  T
Q  101 agaaaaaacctagagaaagaaaattagggccggcttgttggagagggagag 151  Q
    |||||||||||||||| |||||| |||||||  ||| ||||||||||||||    
T  27477012 agaaaaaacctagagacagaaaactagggccaacttattggagagggagag 27476962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 459398 - 459545
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgta 100  Q
    ||||||| |||||||| | ||||||| |||||||| ||||||||| |||||||||| ||||| |||||||||||||||||||||||||||||||| || |    
T  459398 gaaaatcgcttatttaaaatgaaatagagagaaaaggatgaagaggggtgatttcaggtcaaaaattgacccaaaaccacccctcaatgaagaaactgga 459497  T
Q  101 agaaaaaacctagagaaagaaaattagggccggcttgttggagaggga 148  Q
    ||| ||||||||  |||| | ||||||| |   |||||||||||||||    
T  459498 agagaaaacctaaggaaaaataattaggacttacttgttggagaggga 459545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 3725138 - 3725013
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgta 100  Q
    |||||||||||||||| ||||||||| ||||||||||||||||||   |||||| | ||||| ||||||||||||||||||||||||| |||||||||||    
T  3725138 gaaaatcacttatttatattgaaatagagagaaaaagatgaagaggaatgattttaggtcaaaaattgacccaaaaccacccctcaataaagaaattgta 3725039  T
Q  101 agaaaaaacctagagaaagaaaatta 126  Q
    ||| ||||| || | | |||||||||    
T  3725038 agagaaaacttaaaaagagaaaatta 3725013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 6 - 151
Target Start/End: Complemental strand, 25086986 - 25086843
Alignment:
Q  6 tcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgtaagaaa 105  Q
    |||||||| |||||| ||||| |  ||||||||||||||| |||||||||| ||||| ||||||||||||||||||||| ||||||||||  | |||| |    
T  25086986 tcacttatatagattcaaatagatggaaaaagatgaagaggggtgatttcaggtcaataattgacccaaaaccacccctaaatgaagaaaccggaagaga 25086887  T
Q  106 aaacctagagaaagaaaattagggccggcttgttggagagggagag 151  Q
    ||||||||||  |||||| ||| |||||||| || |||||||||||    
T  25086886 aaacctagag--agaaaactagagccggcttattcgagagggagag 25086843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 42949672 - 42949519
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaa-gatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgt 99  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| ||  |||| |||||||||| ||||||| ||     
T  42949672 gaaaatcacttatttagattgaaataaagagaaaaaagatgaagaggggtgatttcaagtcaagaattaacataaaatcacccctcaacgaagaaactgc 42949573  T
Q  100 aagaaaaaacctagagaaagaaaattagggccggcttgttggagagggagagatt 154  Q
     || | ||||||| | | | |||| |  ||| |||||||||||||||||||||||    
T  42949572 tag-agaaacctaaaaagaaaaaacttaggctggcttgttggagagggagagatt 42949519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 40660055 - 40660187
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgta 100  Q
    ||||||||||||||||||||||||||  ||||||||||||||||   ||||||||| ||||||||||||| |||||||| ||||||||||||||| | ||    
T  40660055 gaaaatcacttatttagattgaaata--gagaaaaagatgaagatgtgtgatttcaggtcaagaattgactcaaaacca-ccctcaatgaagaaactcta 40660151  T
Q  101 agaaaaaacctagagaaagaaaattagggccggctt 136  Q
    ||| |||| ||| | | |||||| ||||||||||||    
T  40660152 agagaaaatctaaaaagagaaaactagggccggctt 40660187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 31581843 - 31581976
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgta 100  Q
    |||||||||||||||||||||||||| ||||||||||||||||||                 |||||||||||||||||||||||||||||||||  |||    
T  31581843 gaaaatcacttatttagattgaaatagagagaaaaagatgaagag-----------------gaattgacccaaaaccacccctcaatgaagaaacagta 31581925  T
Q  101 agaaaaaacctagagaaagaaaattagggccggcttgttggagagggagag 151  Q
    ||| |||||||||||| | ||||||| ||||| ||||||||||||||||||    
T  31581926 agagaaaacctagagagaaaaaattaaggccgacttgttggagagggagag 31581976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 32680706 - 32680826
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgta 100  Q
    |||| ||||||||||||||||||||| |||||||||||||||||   ||||||||| ||||||||| |||| ||||||||||| |||||||||||  | |    
T  32680706 gaaagtcacttatttagattgaaatagagagaaaaagatgaagatgagtgatttcaggtcaagaatcgaccgaaaaccacccc-caatgaagaaacggga 32680804  T
Q  101 agaaaaaacctagagaaagaaa 122  Q
    ||| |||||||||||| |||||    
T  32680805 agagaaaacctagagagagaaa 32680826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 32913199 - 32913077
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgta 100  Q
    |||||||||||||||| ||||||||| |||||||| ||| ||||| |||||||||| |||||||||||| ||||||||||||||| ||  | ||  |  |    
T  32913199 gaaaatcacttatttaaattgaaatatagagaaaaggatcaagaggggtgatttcaggtcaagaattgatccaaaaccacccctcgatttaaaatctaga 32913100  T
Q  101 agaaaaaacctagagaaagaaaa 123  Q
    ||| |||||||||||||||||||    
T  32913099 agagaaaacctagagaaagaaaa 32913077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 4192796 - 4192712
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctc 85  Q
    |||||||||||||||||||||||||| |||||||||||||||||| |||||| ||| ||||| |||||| |||||||||| ||||    
T  4192796 gaaaatcacttatttagattgaaatatagagaaaaagatgaagaggggtgatctcaggtcaaaaattgatccaaaaccacacctc 4192712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 39641983 - 39642122
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgta 100  Q
    |||||||| ||||||| ||||||||| ||||||||||||||||| | ||||||||| ||||| |||||| ||||| |||| |||||| |||||| ||  |    
T  39641983 gaaaatcatttatttaaattgaaatagagagaaaaagatgaagataagtgatttcaggtcaaaaattgatccaaagccactcctcaacgaagaagttaaa 39642082  T
Q  101 agaaaaaacctagagaaagaaaattagggccggcttgttg 140  Q
    |||||||| ||| ||| | |||| || ||||| |||||||    
T  39642083 agaaaaaatctaaagagaaaaaactatggccgacttgttg 39642122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 3 - 79
Target Start/End: Complemental strand, 4228087 - 4228011
Alignment:
Q  3 aaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaacca 79  Q
    |||||||||||||| ||||||||||||| ||||| |||||||   ||||||||| ||||||||||||||||||||||    
T  4228087 aaatcacttatttatattgaaataaagataaaaatatgaagatgtgtgatttcaggtcaagaattgacccaaaacca 4228011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 3 - 90
Target Start/End: Complemental strand, 24587669 - 24587581
Alignment:
Q  3 aaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaacca-cccctcaatga 90  Q
    |||||| ||||||| ||||||||| ||| |||||||||||||||||||||||   ||||| |||||||||||||||| |||||||||||    
T  24587669 aaatcatttatttaaattgaaatatagataaaaagatgaagagaggtgattttgggtcaaaaattgacccaaaaccatcccctcaatga 24587581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 95
Target Start/End: Original strand, 9374702 - 9374767
Alignment:
Q  30 agaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaa 95  Q
    |||||||||||||||  | |||||||| ||||| |||||||||||||||| |||||||||||||||    
T  9374702 agaaaaagatgaagaatgttgatttcatgtcaaaaattgacccaaaaccatccctcaatgaagaaa 9374767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 26025533 - 26025682
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaaga-gaggtgatttcaagtc-aagaattgacccaaaaccacccctcaatgaagaaattg 98  Q
    ||||| |||||||||||||||||||| ||||||||||||||||| | ||||||||||  || || |||||     |||| | ||||| ||||||||| |     
T  26025533 gaaaaccacttatttagattgaaatagagagaaaaagatgaagatggggtgatttcagatcaaaaaattg-----aaactatccctcgatgaagaaacta 26025627  T
Q  99 taagaaaaaacctagag----aaagaaaattagggccggcttgttggagagggag 149  Q
     |||| |||||||||||    ||| |||| |||||||||||||||||||||||||    
T  26025628 gaagagaaaacctagagagaaaaaaaaaactagggccggcttgttggagagggag 26025682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 27949380 - 27949272
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaacca-cccctcaatgaagaaattgt 99  Q
    |||||||||||||||||||||||| | || ||||| |||||| ||  ||||||||| ||||||||||| ||||||| || ||||| |||||||||| ||     
T  27949380 gaaaatcacttatttagattgaaacagagcgaaaaggatgaatag-tgtgatttcaggtcaagaattgtcccaaaatcacccccttaatgaagaaaatgg 27949282  T
Q  100 aagaaaaaac 109  Q
    |||| |||||    
T  27949281 aagagaaaac 27949272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 56
Target Start/End: Complemental strand, 41430978 - 41430930
Alignment:
Q  8 acttatttagattgaaataaagagaaaaagatgaagagaggtgatttca 56  Q
    ||||||||||||||||||| |||||||||||||||||| ||||||||||    
T  41430978 acttatttagattgaaatatagagaaaaagatgaagaggggtgatttca 41430930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 10 - 145
Target Start/End: Complemental strand, 17319272 - 17319139
Alignment:
Q  10 ttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgtaagaaaaaac 109  Q
    ||||||||||||||||| | ||||||| |||| ||| | |||||||| ||||| |||||||||||| ||| || ||| |||| ||| |  |||| |||||    
T  17319272 ttatttagattgaaatagatagaaaaa-atgaggagggatgatttcaggtcaaaaattgacccaaatccatcc-tcattgaaaaaactcgaagagaaaac 17319175  T
Q  110 ctagagaaagaaaattagggccggcttgttggagag 145  Q
    ||||||| | |||| ||| |||| ||||||||||||    
T  17319174 ctagagagaaaaaactagagccgtcttgttggagag 17319139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 37614248 - 37614356
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagag--aaaaagatgaagagag-gtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaatt 97  Q
    |||||||||||||||||  ||||||| ||||  |||||||||||| ||| ||||||||| ||||| |||| | ||||||| |||||||| |||||||| |    
T  37614248 gaaaatcacttatttag--tgaaatagagagaaaaaaagatgaagcgagagtgatttcaggtcaaaaattaatccaaaactacccctcactgaagaaaat 37614345  T
Q  98 gtaagaaaaaa 108  Q
    | |||| ||||    
T  37614346 ggaagagaaaa 37614356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 43397282 - 43397366
Alignment:
Q  1 gaaaatcacttatttagattgaaataaa-gagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccct 84  Q
    ||||| |||||||||||||||||| ||| | |||||||||| ||||||||||||  | ||||| || ||||| ||||||||||||    
T  43397282 gaaaaccacttatttagattgaaagaaaagggaaaaagatgtagagaggtgattctaggtcaaaaaatgacctaaaaccacccct 43397366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 3308876 - 3308790
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagag--aaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctc 85  Q
    ||||||||||||||||||||||||||||| |  ||||||||| | || |||||||  | ||||| |||||||| |||| ||||||||    
T  3308876 gaaaatcacttatttagattgaaataaaggggaaaaaagatgcaaaggggtgattctaggtcaaaaattgacctaaaatcacccctc 3308790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 8805824 - 8805781
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaaga 44  Q
    |||||||||||||||| ||||||||||||||||||| |||||||    
T  8805824 gaaaatcacttatttaaattgaaataaagagaaaaatatgaaga 8805781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 83
Target Start/End: Original strand, 30923599 - 30923678
Alignment:
Q  2 aaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccc 83  Q
    ||||||| |||||||||||||||||  ||| ||||||||||||  |||||||||  ||||| |||||||| ||||| |||||    
T  30923599 aaaatcatttatttagattgaaata--gagtaaaagatgaagatgggtgatttcgggtcaaaaattgacctaaaacgacccc 30923678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 32197919 - 32197961
Alignment:
Q  2 aaaatcacttatttagattgaaataaagagaaaaagatgaaga 44  Q
    ||||||| ||||||| |||||||||||||||||||||||||||    
T  32197919 aaaatcatttatttatattgaaataaagagaaaaagatgaaga 32197961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 67 - 112
Target Start/End: Complemental strand, 10248056 - 10248011
Alignment:
Q  67 tgacccaaaaccacccctcaatgaagaaattgtaagaaaaaaccta 112  Q
    |||||||||||||||||||||| ||||||||| |||| ||||||||    
T  10248056 tgacccaaaaccacccctcaataaagaaattgaaagagaaaaccta 10248011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 32448784 - 32448869
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagag-aaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctc 85  Q
    ||||||||||||||||||| |||| |||| | ||||||||| |||| |||||||| | |||||  | ||||| |||||||||||||    
T  32448784 gaaaatcacttatttagatcgaaagaaaggggaaaaagatgcagaggggtgattttaggtcaaataatgacctaaaaccacccctc 32448869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 23933783 - 23933838
Alignment:
Q  1 gaaaatcacttatttagattgaaataaa--gagaaaaagatgaagagaggtgattt 54  Q
    |||| |||||||||||||||||||||||  || ||||||||| |||||||||||||    
T  23933783 gaaagtcacttatttagattgaaataaagggaaaaaaagatgtagagaggtgattt 23933838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 125
Target Start/End: Complemental strand, 34124391 - 34124287
Alignment:
Q  22 aaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgtaagaaaaaa-cctagagaaaga 120  Q
    |||||||||||||||||||||    | |||||||||||||| || | |||||||| || |||   ||||| ||| || ||||||||| ||||||||||||    
T  34124391 aaataaagagaaaaagatgaaacatgatgatttcaagtcaaaaactaacccaaaatcatcccaggatgaataaaatgaaagaaaaaaccctagagaaaga 34124292  T
Q  121 aaatt 125  Q
    |||||    
T  34124291 aaatt 34124287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 10237375 - 10237457
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagag--aaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacc 81  Q
    |||||||||||||||||||||||| |||| |  ||||||||| |||| |||||||  | ||||| |||||||| |||| ||||    
T  10237375 gaaaatcacttatttagattgaaagaaaggggaaaaaagatgtagaggggtgattctaggtcaaaaattgacctaaaatcacc 10237457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 44
Target Start/End: Complemental strand, 18695004 - 18694961
Alignment:
Q  2 aaaatcacttatttagattgaaataaagag-aaaaagatgaaga 44  Q
    ||||||||||||||||||||||||| |||| |||||||||||||    
T  18695004 aaaatcacttatttagattgaaatagagagaaaaaagatgaaga 18694961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 85
Target Start/End: Complemental strand, 14955458 - 14955374
Alignment:
Q  3 aaatcacttatttagattgaaataaagag--aaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctc 85  Q
    |||||||||||||||||||||| ||||||  ||||||||| |||| | |||||  | ||||| |||||||  |||| ||||||||    
T  14955458 aaatcacttatttagattgaaagaaagaggaaaaaagatgcagagggatgattctaggtcaaaaattgacttaaaatcacccctc 14955374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 39285420 - 39285501
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagag-aaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacc 81  Q
    ||||| |||||||||| | ||||||  |||| |||||||| |||| |||||||||||| ||||  |||||||||||| ||||    
T  39285420 gaaaaccacttatttaaaatgaaatggagaggaaaaagataaagataggtgatttcaactcaaatattgacccaaaatcacc 39285501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 113; Significance: 1e-56; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 113; E-Value: 1e-56
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 19716021 - 19716172
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgta 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||| ||||||||||||||||||    
T  19716021 gaaaatcacttatttagattgaaataaagagaaaaagatgaagag-ggtgatttcagatcaagaattgacccaaaaccacctctcaatgaagaaattgta 19716119  T
Q  101 agaaaaaacctagagaaagaaaattagggccggcttgttggagagggagagat 153  Q
    |||||||||||| ||| |||||| |||||||| ||||||| ||||||||||||    
T  19716120 agaaaaaacctaaagagagaaaactagggccgacttgttgaagagggagagat 19716172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 113; E-Value: 1e-56
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 40646645 - 40646497
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgta 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||   ||||||| | |||||||||||||||||||||||||||||||||||||||||||    
T  40646645 gaaaatcacttatttagattgaaataaatagaaaaagatgaagatgagtgattttaggtcaagaattgacccaaaaccacccctcaatgaagaaattgta 40646546  T
Q  101 agaaaaaacctagagaaagaaaattagggccggcttgttggagagggag 149  Q
    ||| |||||||||||| |||||| |||||||||||||||||||||||||    
T  40646545 agagaaaacctagagagagaaaactagggccggcttgttggagagggag 40646497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 108; E-Value: 1e-53
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 5701214 - 5701059
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgta 100  Q
    |||||||||||||||| |||||||||||||||||||||||||||| |||||||||| |||||| |||||||||||  ||||||||||| |||||||||||    
T  5701214 gaaaatcacttatttaaattgaaataaagagaaaaagatgaagaggggtgatttcaggtcaagtattgacccaaagtcacccctcaataaagaaattgta 5701115  T
Q  101 agaaaaaacctagagaaagaaaattagggccggcttgttggagagggagagattct 156  Q
    ||| ||||| |||||| |||||| |||||||||||| |||||||||||||||||||    
T  5701114 agagaaaacttagagagagaaaactagggccggcttattggagagggagagattct 5701059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 35584745 - 35584883
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgta 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||   ||||||||| || |||||||||||||||| |||||||||||||||||||||||    
T  35584745 gaaaatcacttatttagattgaaataaagagaaaaagatgaagatgagtgatttcaggttaagaattgacccaaaatcacccctcaatgaagaaattgta 35584844  T
Q  101 agaaaaaacctagagaaagaaaattagggccggcttgtt 139  Q
    ||| ||||||||||||||||||| |||||| | ||||||    
T  35584845 agagaaaacctagagaaagaaaactagggcggacttgtt 35584883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 98; E-Value: 9e-48
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 18569434 - 18569576
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgta 100  Q
    |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||  ||||| |||||||||||||||||||||||||||||||| || |    
T  18569434 gaaaatcacttatttagattgaaatagagagaaaaagatgaagacaggtgatttcttgtcaaaaattgacccaaaaccacccctcaatgaagaaactgga 18569533  T
Q  101 agaaaaaacctagagaaagaaaattagggccggcttgttggagag 145  Q
    ||| |||||||||||  ||||||||||| ||||||||||||||||    
T  18569534 agagaaaacctagag--agaaaattaggaccggcttgttggagag 18569576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 98; E-Value: 9e-48
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 25728083 - 25728227
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgta 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||  ||||||||| ||||||||||||||||||||||||| ||| |||||||||||||    
T  25728083 gaaaatcacttatttagattgaaataaagagaaaaagatgaagaggagtgatttcaggtcaagaattgacccaaaaccacccgtcattgaagaaattgta 25728182  T
Q  101 agaaaaaacctagagaaagaaaattagggccggcttgttggagaggga 148  Q
    ||| |    ||||||||||||||||||| ||| |||||||||||||||    
T  25728183 agagat---ctagagaaagaaaattaggaccgacttgttggagaggga 25728227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 95; E-Value: 6e-46
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 51871821 - 51871672
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgta 100  Q
    |||| ||||||||||||||||||||| |||||||||||||||||| |||||||| | |||||||||||||||||||||||||| |||||||||||    |    
T  51871821 gaaagtcacttatttagattgaaatagagagaaaaagatgaagaggggtgattttaggtcaagaattgacccaaaaccacccc-caatgaagaaacgaga 51871723  T
Q  101 agaaaaaacctagagaaagaaaattagggccggcttgttggagagggagag 151  Q
    ||| |||||||||||| ||||||||||||||| ||||||||||||||||||    
T  51871722 agagaaaacctagagagagaaaattagggccgacttgttggagagggagag 51871672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 93; E-Value: 9e-45
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 5324681 - 5324825
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgta 100  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||| || ||||||||||||||||||| || ||||||||||||||| |  |    
T  5324681 gaaaatcacttatttagattgaaatagagagaaaaagatgaagagaggtgattccaggtcaagaattgacccaaaatcatccctcaatgaagaaacttga 5324780  T
Q  101 agaaaaaacctagagaaagaaaattagggccggcttgttggagag 145  Q
    ||| |||| ||||||| ||||||||||||| | ||||||||||||    
T  5324781 agagaaaatctagagagagaaaattagggctgacttgttggagag 5324825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 90; E-Value: 6e-43
Query Start/End: Original strand, 6 - 151
Target Start/End: Complemental strand, 7342674 - 7342529
Alignment:
Q  6 tcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgtaagaaa 105  Q
    ||||||||||||||||||||| | | ||||| |||||||| |||||||||| ||||| |||||||||||||||||||| |||||||||||  | |||| |    
T  7342674 tcacttatttagattgaaatagataaaaaaatatgaagaggggtgatttcaggtcaaaaattgacccaaaaccaccccccaatgaagaaacgggaagaga 7342575  T
Q  106 aaacctagagaaagaaaattagggccggcttgttggagagggagag 151  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||||    
T  7342574 aaacctagagagagaaaattagggccggcttattggagagggagag 7342529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 25406408 - 25406542
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgta 100  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||  ||||||||| ||||||||||||||||||| |||||| |||||||||||  | |    
T  25406408 gaaagtcacttatttagattgaaatagagagaaaaagatgaagaggtgtgatttcaggtcaagaattgacccaaaatcaccccccaatgaagaaacggga 25406507  T
Q  101 agaaaaaacctagagaaagaaaattagggccggct 135  Q
    ||||||||| |||||||||||||||| ||||||||    
T  25406508 agaaaaaacttagagaaagaaaattaaggccggct 25406542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 33291542 - 33291687
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaaga-tgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgt 99  Q
    |||||||||||||||| ||||||||| | ||||||| | ||||||| |||||||||| |||||||||||||||||||||||||||||||||| ||| | |    
T  33291542 gaaaatcacttatttatattgaaatagaaagaaaaaaaatgaagaggggtgatttcaggtcaagaattgacccaaaaccacccctcaatgaaaaaactat 33291641  T
Q  100 aagaaaaaacctagagaaagaaaattagggccggcttgttggagag 145  Q
    ||||||||| |||||||||||||| |||||||| ||||||| ||||    
T  33291642 aagaaaaaatctagagaaagaaaactagggccgacttgttgaagag 33291687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 30879032 - 30878924
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgta 100  Q
    |||||||||||||||||||| |||||||||||||||||||||||||| |||| ||| ||||| |||||||||||||||||||||||||||||||||||||    
T  30879032 gaaaatcacttatttagattaaaataaagagaaaaagatgaagagagatgatctcaggtcaaaaattgacccaaaaccacccctcaatgaagaaattgta 30878933  T
Q  101 agaaaaaac 109  Q
    ||| |||||    
T  30878932 agagaaaac 30878924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 50272264 - 50272372
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgta 100  Q
    |||||| ||||||||||||||||||||||||||||||||||| || |||||||||| ||||||||||||||||||||||||| |||||||||||||||||    
T  50272264 gaaaattacttatttagattgaaataaagagaaaaagatgaataggggtgatttcaggtcaagaattgacccaaaaccacccttcaatgaagaaattgta 50272363  T
Q  101 agaaaaaac 109  Q
    ||| |||||    
T  50272364 agagaaaac 50272372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 83; E-Value: 8e-39
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 9172445 - 9172307
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgta 100  Q
    |||| ||||||||||||||||||||| ||| ||||| |||||||| |||||||||| |||||||||||||||||||||||||| |||||||||||| | |    
T  9172445 gaaagtcacttatttagattgaaatagagaaaaaaatatgaagaggggtgatttcaggtcaagaattgacccaaaaccaccccccaatgaagaaatggga 9172346  T
Q  101 agaaaaaacctagagaaagaaaattagggccggcttgtt 139  Q
     || ||||| ||| || ||||||||||||||||||||||    
T  9172345 tgagaaaacttagtgagagaaaattagggccggcttgtt 9172307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 83; E-Value: 8e-39
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 9180427 - 9180289
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgta 100  Q
    |||| ||||||||||||||||||||| ||| ||||| |||||||| |||||||||| |||||||||||||||||||||||||| |||||||||||| | |    
T  9180427 gaaagtcacttatttagattgaaatagagaaaaaaatatgaagaggggtgatttcaggtcaagaattgacccaaaaccaccccccaatgaagaaatggga 9180328  T
Q  101 agaaaaaacctagagaaagaaaattagggccggcttgtt 139  Q
     || ||||| ||| || ||||||||||||||||||||||    
T  9180327 tgagaaaacttagtgagagaaaattagggccggcttgtt 9180289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 83; E-Value: 8e-39
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 51868769 - 51868903
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgta 100  Q
    |||| ||||||||||||||||||||| |||||||||||||||||| |||||||||| |||||||||| ||||||||||||||| |||||||||||  | |    
T  51868769 gaaagtcacttatttagattgaaatagagagaaaaagatgaagaggggtgatttcaggtcaagaattaacccaaaaccaccccccaatgaagaaacggga 51868868  T
Q  101 agaaaaaacctagagaaagaaaattagggccggct 135  Q
    ||| |||||||| ||| |||||||||||| |||||    
T  51868869 agagaaaacctaaagagagaaaattagggtcggct 51868903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 45426186 - 45426331
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaacca-cccctcaatgaagaaattgt 99  Q
    |||||||||||||||||||| ||||| ||||||||||||||| | |||||||||||| ||||||||||||||||||||| |||||||||||||||| ||     
T  45426186 gaaaatcacttatttagatttaaatagagagaaaaagatgaaaataggtgatttcaaatcaagaattgacccaaaaccaccccctcaatgaagaaactgg 45426285  T
Q  100 aagaaaaaacctagagaaagaaaattagggccggcttgttggagag 145  Q
    || | |||||||||||| | ||||  ||||||||||| || |||||    
T  45426286 aaaagaaaacctagagagaaaaaaccagggccggctttttcgagag 45426331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 50148329 - 50148196
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgta 100  Q
    |||||||||||||||||||| |||||||||||||| ||||||||  | ||||||||  || |||||||||||||||||||||||||||||||||||| ||    
T  50148329 gaaaatcacttatttagattaaaataaagagaaaaggatgaagatggatgatttcagatctagaattgacccaaaaccacccctcaatgaagaaattata 50148230  T
Q  101 agaaaaaacctagagaaagaaaattagggccggc 134  Q
    ||| |||| ||||||| |||||| ||||| ||||    
T  50148229 agagaaaatctagagagagaaaactagggtcggc 50148196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 30818469 - 30818604
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgta 100  Q
    |||||||||||||||||||||||||| |||||||||||||||||  |||||||||| ||||| |||||||||||||| ||||||||||||||||| ||||    
T  30818469 gaaaatcacttatttagattgaaatagagagaaaaagatgaagatgggtgatttcaggtcaataattgacccaaaactacccctcaatgaagaaactgta 30818568  T
Q  101 agaaaaaacctagagaaagaaaattagggccggcttg 137  Q
    | | ||||| |||||| || | | |||||||||||||    
T  30818569 aaagaaaacttagagagag-agactagggccggcttg 30818604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 19723290 - 19723143
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaag-atgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgt 99  Q
    ||||||||||||||||||||||| || |||||||||  ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||| | |    
T  19723290 gaaaatcacttatttagattgaa-tagagagaaaaaatatgaagagaggtgatttcaagtcaataattgacccaaaacca-ccctcaatgaagaaactat 19723193  T
Q  100 aagaaaaaacctagagaaagaaaattagggccggcttgttggagagggag 149  Q
    |||| |||||||||||||| |||| |||  |  ||||||||||| |||||    
T  19723192 aagagaaaacctagagaaaaaaaactagaacatgcttgttggagggggag 19723143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 50166223 - 50166367
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgta 100  Q
    |||| ||||||||||||||||||||| | |||||||||| ||||| ||  |||||| ||||| |||||||||||||||||||| |||||||||||  | |    
T  50166223 gaaattcacttatttagattgaaatagatagaaaaagataaagaggggcaatttcaggtcaataattgacccaaaaccacccc-caatgaagaaacggga 50166321  T
Q  101 agaaaaaacctagagaaagaaaattagggccggcttgttggagagg 146  Q
    ||| |||||||||||| ||||||||| || ||||||||||||||||    
T  50166322 agagaaaacctagagagagaaaattatgggcggcttgttggagagg 50166367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 20266259 - 20266151
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaacca-cccctcaatgaagaaattgt 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||  |||||||| |  ||||||||||||||||||||| |||||| |||||||||||||    
T  20266259 gaaaatcacttatttagattgaaataaagagaaaaagatgaagatgggtgattttagatcaagaattgacccaaaaccaccccctcgatgaagaaattgt 20266160  T
Q  100 aagaaaaaa 108  Q
    |||| ||||    
T  20266159 aagagaaaa 20266151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 45805933 - 45806081
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaacca-cccctcaatgaagaaattgt 99  Q
    |||| ||||||||||||||||||||| ||||||||||| ||||| |||||||||||  |||| |||||||||||||||| |||| |||| ||||||  |     
T  45805933 gaaagtcacttatttagattgaaatagagagaaaaagaggaagaaaggtgatttcagatcaaaaattgacccaaaaccacccccccaataaagaaacggg 45806032  T
Q  100 aagaaaaaacctagagaaagaaaattagggccggcttgttggagaggga 148  Q
    |||| |||| ||||||| ||||||||||| ||| |||||||||||||||    
T  45806033 aagagaaaatctagagagagaaaattaggaccgacttgttggagaggga 45806081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 40881137 - 40881252
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgta 100  Q
    |||||||||| ||||||||||||||| |||||||||||||||||   ||||||| | |||||||||||||||||||||| |||||||||||||||  |||    
T  40881137 gaaaatcactcatttagattgaaatagagagaaaaagatgaagatgagtgattttaggtcaagaattgacccaaaaccatccctcaatgaagaaacggta 40881236  T
Q  101 agaaaaaacctagaga 116  Q
    ||| ||||||||||||    
T  40881237 agagaaaacctagaga 40881252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 14545477 - 14545340
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgta 100  Q
    |||||||||||||||||||||||||| |||||||||||||||||   ||||||||| ||||||||||||| |||||||||| ||| ||| | ||  |  |    
T  14545477 gaaaatcacttatttagattgaaatatagagaaaaagatgaagatgagtgatttcaggtcaagaattgacacaaaaccaccgctcgatggaaaatctaga 14545378  T
Q  101 agaaaaaacctagagaaagaaaattagggccggcttgt 138  Q
    ||| |||||||||||| |||||| ||||||||||||||    
T  14545377 agagaaaacctagagagagaaaactagggccggcttgt 14545340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 27872696 - 27872549
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgta 100  Q
    |||||||||||||||||||||||||| || ||||||||||||||  |||||||||| ||||| |||||||||||||||||||      ||||||| |  |    
T  27872696 gaaaatcacttatttagattgaaatagagcgaaaaagatgaagatgggtgatttcatgtcaaaaattgacccaaaaccaccc------gaagaaactaga 27872603  T
Q  101 agaaaaaacctag--agaaagaaaattagggccggcttgttggagagggagaga 152  Q
    ||| |||||||||  ||| | ||||||||||||| |||||| ||||||||||||    
T  27872602 agagaaaacctagaaagagaaaaaattagggccgacttgttagagagggagaga 27872549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 38520657 - 38520784
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaacca-cccctcaatgaagaaattgt 99  Q
    ||||||||||||||||||| |||||| |||||||||||||||||   ||||||||| || || |||||| ||||||||| ||||| |||||||||| ||     
T  38520657 gaaaatcacttatttagatcgaaatagagagaaaaagatgaagatgagtgatttcaggtaaaaaattgatccaaaaccacccccttaatgaagaaactga 38520756  T
Q  100 aagaaaaaacctagagaaagaaaattag 127  Q
    |||| |||||||||||||| ||||||||    
T  38520757 aagagaaaacctagagaaaaaaaattag 38520784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 7312222 - 7312370
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattg-- 98  Q
    |||||||| |||||||  |||||||| ||||||||||||||||||| || |||| | ||||| |||||||||||||| ||||||||||||||||| ||      
T  7312222 gaaaatcatttatttaatttgaaatagagagaaaaagatgaagagaagtaattttaggtcaaaaattgacccaaaactacccctcaatgaagaaactgga 7312321  T
Q  99 -taagaaaaaacctagagaaagaaaattagggccggcttgttggagagg 146  Q
      || |||||||||||||| | ||||||| | |||| ||||||||||||    
T  7312322 aaaaaaaaaaacctagagagaaaaaattaagaccggtttgttggagagg 7312370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 11453893 - 11453777
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagaga--aaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattg 98  Q
    ||||| |||||||||||||||||||| |||||  ||||||||||||||| |||||||||||||| ||||||||  |||||| ||||||||||||||| ||    
T  11453893 gaaaaccacttatttagattgaaatagagagagaaaaagatgaagagag-tgatttcaagtcaaaaattgaccagaaaccatccctcaatgaagaaactg 11453795  T
Q  99 taagaaaaaacctagaga 116  Q
     |||| ||||||||||||    
T  11453794 aaagagaaaacctagaga 11453777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 44637379 - 44637235
Alignment:
Q  1 gaaaatcacttatttagattgaaataaaga-gaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaacca-cccctcaatgaagaaattg 98  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||||||||||| | ||||| |||||||||||||||| ||||| |||||||||| |     
T  44637379 gaaaatcacttatttagattgaaataaagataaaaaagatgaagagaggtgattttatgtcaa-aattgacccaaaaccacccccttaatgaagaaacta 44637281  T
Q  99 taagaaaaaacctagaga-aagaaaattagggccggcttgttggag 143  Q
     |||| |||| ||| ||| || |||||||||||||  |||||||||    
T  44637280 gaagagaaaatctaaagagaaaaaaattagggccgatttgttggag 44637235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 28035096 - 28035008
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatg 89  Q
    |||||||||||||||||||||||||| |||||||||||||||||   ||||||||| ||||| |||||||||||||||||| |||||||    
T  28035096 gaaaatcacttatttagattgaaatagagagaaaaagatgaagatgagtgatttcaggtcaataattgacccaaaaccacctctcaatg 28035008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 86 - 156
Target Start/End: Complemental strand, 31836738 - 31836668
Alignment:
Q  86 aatgaagaaattgtaagaaaaaacctagagaaagaaaattagggccggcttgttggagagggagagattct 156  Q
    |||||||||||||||||| |||||||||||| |||||| ||||||||||||||||||||||||||||||||    
T  31836738 aatgaagaaattgtaagagaaaacctagagagagaaaactagggccggcttgttggagagggagagattct 31836668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 7997744 - 7997659
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctca 86  Q
    |||||||||||||||| |||||||||||||||||||||||||||  ||||||||||  |||| |||| ||||||||||||||||||    
T  7997744 gaaaatcacttatttatattgaaataaagagaaaaagatgaagaagggtgatttcagatcaaaaattaacccaaaaccacccctca 7997659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 2 - 91
Target Start/End: Complemental strand, 39987346 - 39987251
Alignment:
Q  2 aaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgat------ttcaagtcaagaattgacccaaaaccacccctcaatgaa 91  Q
    ||||||||||||||||||||||  | |||||||||||||||||||||||||      |||| ||||| ||||||||||||||||| | ||||||||    
T  39987346 aaaatcacttatttagattgaatcagagagaaaaagatgaagagaggtgatttcattttcatgtcaaaaattgacccaaaaccactcttcaatgaa 39987251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 2 - 52
Target Start/End: Complemental strand, 9919345 - 9919295
Alignment:
Q  2 aaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgat 52  Q
    ||||||||||||||||||||||||| |||||||||||||||||| ||||||    
T  9919345 aaaatcacttatttagattgaaatagagagaaaaagatgaagaggggtgat 9919295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 3871366 - 3871285
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaaga-gaggtgatttcaagtcaagaattgacccaaaaccacc 81  Q
    |||||||||||||||||||||||||  ||||| ||||||||| | | ||||||||||  ||||||||| |||||||||||||    
T  3871366 gaaaatcacttatttagattgaaattgagagagaaagatgaaaagggggtgatttcagatcaagaattaacccaaaaccacc 3871285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 48365887 - 48365956
Alignment:
Q  13 tttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccaccc 82  Q
    ||||| |||||| | ||||||||||||||||| |||||||||||  |||| |||||||||||||||||||    
T  48365887 tttagtttgaaacagagagaaaaagatgaagataggtgatttcatttcaaaaattgacccaaaaccaccc 48365956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 85
Target Start/End: Complemental strand, 16161760 - 16161676
Alignment:
Q  3 aaatcacttatttagattgaaataaa-gag-aaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctc 85  Q
    |||||||||||||||||||||||||| ||| ||||| ||||||||||||||||  | ||||| |||||||| ||||  |||||||    
T  16161760 aaatcacttatttagattgaaataaaggagaaaaaatatgaagagaggtgattctaggtcaaaaattgacctaaaattacccctc 16161676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 152
Target Start/End: Original strand, 41081829 - 41081983
Alignment:
Q  3 aaatcacttatttagattgaaataaag-agaaaaagatgaagagaggtgatttcaagtcaagaattga-cccaaaaccacccctcaatgaagaaattgta 100  Q
    ||||||||||| |||||||||||  |  |||||||||||||||   ||||||||| ||||| |||||| ||||||||||||||  || ||||||| |  |    
T  41081829 aaatcacttatatagattgaaatggactagaaaaagatgaagatgagtgatttcaggtcaaaaattgaccccaaaaccaccccataacgaagaaactaga 41081928  T
Q  101 agaaaaaacctagagaaagaaaattagggccggc---ttgttggagagggagaga 152  Q
     |||||||| |||||| | |||| || ||||| |   ||||||||||||||||||    
T  41081929 tgaaaaaacttagagagaaaaaactaaggccgacttattgttggagagggagaga 41081983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 100 - 151
Target Start/End: Complemental strand, 9919284 - 9919233
Alignment:
Q  100 aagaaaaaacctagagaaagaaaattagggccggcttgttggagagggagag 151  Q
    |||| |||| ||||||| ||||||||||||||||||||||||||||| ||||    
T  9919284 aagagaaaatctagagagagaaaattagggccggcttgttggagaggaagag 9919233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 66 - 145
Target Start/End: Complemental strand, 48217520 - 48217443
Alignment:
Q  66 ttgacccaaaaccacccctcaatgaagaaattgtaagaaaaaacctagagaaagaaaattagggccggcttgttggagag 145  Q
    ||||||||||||||||  || ||||||||| ||||||| |||||||||||||| |||| |||| ||| ||||||||||||    
T  48217520 ttgacccaaaaccacca-tcgatgaagaaactgtaagagaaaacctagagaaa-aaaactaggaccgacttgttggagag 48217443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 34519090 - 34519054
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaag 37  Q
    |||||||||||||||||||||||||| ||||||||||    
T  34519090 gaaaatcacttatttagattgaaatagagagaaaaag 34519054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 49626840 - 49626754
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagag--aaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctc 85  Q
    ||||||||||||||||||| |||| |||| |  ||||||||| |||| |||||||| | |||||  | ||||| |||||||||||||    
T  49626840 gaaaatcacttatttagatagaaagaaaggggaaaaaagatgcagaggggtgattttaggtcaaagaatgacctaaaaccacccctc 49626754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 3 - 53
Target Start/End: Complemental strand, 34528645 - 34528595
Alignment:
Q  3 aaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatt 53  Q
    ||||||||||||||||| |||| |||| |||||||||| |||| |||||||    
T  34528645 aaatcacttatttagatcgaaagaaagggaaaaagatgcagaggggtgatt 34528595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 503 - 596
Target Start/End: Complemental strand, 2748894 - 2748801
Alignment:
Q  503 caatgcaaacacacaccatataaattagcatacattaaatatatcacgcgttttcataaacttagtaaaatggtatttaaaacatccataaaat 596  Q
    ||||||||| ||| ||||||||||||| ||| ||| ||||| | |||  || ||| |||||||| |||| || |||||||||||| ||| ||||    
T  2748894 caatgcaaatacataccatataaattaacatccatcaaataaaccacatgtcttcttaaacttactaaagtgatatttaaaacattcatcaaat 2748801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 29738797 - 29738884
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagag---aaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctc 85  Q
    ||||| |||||||||||||||||| ||| ||   ||||||||| |||| |||||||  | || || |||||||| |||||||||||||    
T  29738797 gaaaaccacttatttagattgaaagaaaaaggggaaaaagatgtagaggggtgattctaggtaaaaaattgacctaaaaccacccctc 29738884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 108; Significance: 1e-53; HSPs: 47)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 108; E-Value: 1e-53
Query Start/End: Original strand, 2 - 149
Target Start/End: Complemental strand, 9283875 - 9283728
Alignment:
Q  2 aaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgtaa 101  Q
    |||||||||||||||||||||||||||||||||| ||||||||| |||||||||| || ||| |||||||||||||||||||||||||||||||||||||    
T  9283875 aaaatcacttatttagattgaaataaagagaaaacgatgaagaggggtgatttcaggttaagtattgacccaaaaccacccctcaatgaagaaattgtaa 9283776  T
Q  102 gaaaaaacctagagaaagaaaattagggccggcttgttggagagggag 149  Q
    || | |||||||||| |||||| |||||||| ||||||||||||||||    
T  9283775 gagataacctagagagagaaaactagggccgacttgttggagagggag 9283728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 108; E-Value: 1e-53
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 47416849 - 47416695
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgta 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  47416849 gaaaatcacttatttagattgaaataaagagaaaaagatgaagaggggtgatttcaagtcaataattgacccaaaatcacccctcaatgaagaaattgta 47416750  T
Q  101 agaaaaaacctagagaaagaaaattagggccggcttgttggagagggagagattct 156  Q
    ||| ||||||||||  || |||| ||||| || ||||||||||||||| |||||||    
T  47416749 agagaaaacctagatgaa-aaaactagggtcgacttgttggagagggaaagattct 47416695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 107; E-Value: 4e-53
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 50766633 - 50766790
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatga--agaaattg 98  Q
    |||||||| |||||||||||||||||||||||||||||||||||| | ||||||||  ||||||||||||||||||||||| ||||||||  ||||||||    
T  50766633 gaaaatcatttatttagattgaaataaagagaaaaagatgaagagggatgatttcagatcaagaattgacccaaaaccacctctcaatgaagagaaattg 50766732  T
Q  99 taagaaaaaacctagagaaagaaaattagggccggcttgttggagagggagagattct 156  Q
    ||||| |||||||||||| | |||| ||||||||||||||||||||||||||||||||    
T  50766733 taagagaaaacctagagagaaaaaactagggccggcttgttggagagggagagattct 50766790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 106; E-Value: 2e-52
Query Start/End: Original strand, 6 - 151
Target Start/End: Complemental strand, 6972769 - 6972625
Alignment:
Q  6 tcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgtaagaaa 105  Q
    ||||||||||||||||||||| ||| |||||||||||||||||||||||||  ||||||||||||||||||||||||| |||||||||||  | ||||||    
T  6972769 tcacttatttagattgaaatacagataaaaagatgaagagaggtgatttcagatcaagaattgacccaaaaccacccc-caatgaagaaaccggaagaaa 6972671  T
Q  106 aaacctagagaaagaaaattagggccggcttgttggagagggagag 151  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||    
T  6972670 aaacctagagagagaaaattagggccggcttgttggagagggagag 6972625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 106; E-Value: 2e-52
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 9529002 - 9529151
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgta 100  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| ||||||||||||||||||||||||||||| |||||||| ||||    
T  9529002 gaaaatcacttatttagattgaaataaagagaaaaagataaagaggggtgatttcaggtcaagaattgacccaaaaccacccctcagtgaagaaactgta 9529101  T
Q  101 agaaaaaacctagagaaagaaaattagggccggcttgttggagagggaga 150  Q
    ||| |||||||| ||| | |||| |||||||| |||||||||||||||||    
T  9529102 agagaaaacctaaagagataaaactagggccgacttgttggagagggaga 9529151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 106; E-Value: 2e-52
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 53616775 - 53616912
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgta 100  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| ||||||||||||||||||  |||||||||| ||||||||||||    
T  53616775 gaaaatcacttatttagattgaaataaagagaaaacgatgaagagtggtgatttcaggtcaagaattgacccaaagtcacccctcaacgaagaaattgta 53616874  T
Q  101 agaaaaaacctagagaaagaaaattagggccggcttgt 138  Q
    ||| |||||||||||| |||||||||||||||||||||    
T  53616875 agagaaaacctagagagagaaaattagggccggcttgt 53616912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 105; E-Value: 6e-52
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 20569217 - 20569065
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgta 100  Q
    |||||||| ||||||||||||||||||||||||||| |||||||| |||||||||| || |||||||||||||||||||||| |||||||||||||| ||    
T  20569217 gaaaatcatttatttagattgaaataaagagaaaaaaatgaagaggggtgatttcaggttaagaattgacccaaaaccacccatcaatgaagaaattata 20569118  T
Q  101 agaaaaaacctagagaaagaaaattagggccggcttgttggagagggagagat 153  Q
     ||||||||||||||  |||||| ||| |||||||||||||||||||||||||    
T  20569117 cgaaaaaacctagagggagaaaactagagccggcttgttggagagggagagat 20569065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 101; E-Value: 2e-49
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 2115712 - 2115863
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgta 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| | ||||||||| ||||| |||||||||||||||||||||||||||| ||||||||    
T  2115712 gaaaatcacttatttagattgaaataaagagaaaaagatgaagaaaagtgatttcaggtcaataattgacccaaaaccacccctcaatgaataaattgta 2115811  T
Q  101 agaaaaaacctagagaaagaaaattagggccggcttgttggagagggagagat 153  Q
    |||||||| ||||||| |||||| ||   ||| ||||||||||||||||||||    
T  2115812 agaaaaaatctagagagagaaaacta-aaccgacttgttggagagggagagat 2115863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 101; E-Value: 2e-49
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 10389877 - 10390025
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgta 100  Q
    |||| ||||||||||||||||||||| |||||||||||||||||   ||||||||| |||||||||||||||||||||||||||||||||||||| | ||    
T  10389877 gaaagtcacttatttagattgaaatagagagaaaaagatgaagatgagtgatttcaggtcaagaattgacccaaaaccacccctcaatgaagaaactata 10389976  T
Q  101 agaaaaaacctagagaaagaaaattagggccggcttgttggagagggag 149  Q
    ||| |||||||||| | |||||| |||||||||||||||||||||||||    
T  10389977 agagaaaacctagaaagagaaaactagggccggcttgttggagagggag 10390025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 101; E-Value: 2e-49
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 43444358 - 43444218
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgta 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||  ||||||||||  |||| |||||||||||||| |||||||||||||| |||||||    
T  43444358 gaaaatcacttatttagattgaaataaagagaaaaagatgaagatgggtgatttcagatcaaaaattgacccaaaactacccctcaatgaaggaattgta 43444259  T
Q  101 agaaaaaacctagagaaagaaaattagggccggcttgttgg 141  Q
    ||| |||||||||||| |||||| |||||||||||||||||    
T  43444258 agagaaaacctagagagagaaaactagggccggcttgttgg 43444218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 100; E-Value: 6e-49
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 9645673 - 9645816
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgta 100  Q
    |||| ||||||||||||||||||||| ||| |||||||||||||| |||||| ||| |||||||||||||||||||| ||||||||||||||||| ||||    
T  9645673 gaaagtcacttatttagattgaaatagagacaaaaagatgaagaggggtgatatcaggtcaagaattgacccaaaacgacccctcaatgaagaaactgta 9645772  T
Q  101 agaaaaaacctagagaaagaaaattagggccggcttgttggaga 144  Q
    ||| ||| ||||||||||||||| ||||||||||||||||||||    
T  9645773 agataaagcctagagaaagaaaactagggccggcttgttggaga 9645816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 1531872 - 1531718
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagaga-aaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgt 99  Q
    |||||||||||||||||||||||||| ||||| ||||||| ||||| |||||||||| ||||||||||||||||| |||||||||||||||||||| |||    
T  1531872 gaaaatcacttatttagattgaaatagagagagaaaagataaagaggggtgatttcaggtcaagaattgacccaataccacccctcaatgaagaaactgt 1531773  T
Q  100 aagaaaaaacctagagaaagaaaattagggccggcttgttggagagggagagatt 154  Q
    |||| |||||||||| | |||||| |||| |||||||||||||||||| ||||||    
T  1531772 aagagaaaacctagaaagagaaaactaggaccggcttgttggagagggtgagatt 1531718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 95; E-Value: 6e-46
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 43154145 - 43154294
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgta 100  Q
    |||||||||||||||||||||||||| |||||||| ||||||||| ||||||||||||||||||||||||||||||||||| ||||||| | ||||||||    
T  43154145 gaaaatcacttatttagattgaaatagagagaaaa-gatgaagaggggtgatttcaagtcaagaattgacccaaaaccacctctcaatggataaattgta 43154243  T
Q  101 agaaaaaacctagagaaagaaaattagggccggcttgttggagagggagag 151  Q
    ||| |||||||| ||| |||||| |||||||  |||||||||| |||||||    
T  43154244 agataaaacctaaagagagaaaactagggccaacttgttggagcgggagag 43154294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 92; E-Value: 4e-44
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 25273845 - 25273690
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaa-----agatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaa 95  Q
    |||||||||||||||||||||||||| ||||||||     |||||||||| |||||||||| |||||||||||| ||||||||||||||||||| |||||    
T  25273845 gaaaatcacttatttagattgaaatagagagaaaagatgaagatgaagaggggtgatttcaggtcaagaattgatccaaaaccacccctcaatggagaaa 25273746  T
Q  96 ttgtaagaaaaaacctagagaaagaaaattagggccggcttgttggagagggagag 151  Q
     ||||||| |||| ||||||| |||||| |||||||||||||||||||||| ||||    
T  25273745 ctgtaagagaaaatctagagagagaaaactagggccggcttgttggagaggaagag 25273690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 2 - 151
Target Start/End: Original strand, 5333656 - 5333802
Alignment:
Q  2 aaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgtaa 101  Q
    ||||||||||||||| ||||||||| |||||||||||||||||| |||||||||| ||||| ||||||||||||||||||||  ||||||||||  | ||    
T  5333656 aaaatcacttatttatattgaaatagagagaaaaagatgaagag-ggtgatttcatgtcaaaaattgacccaaaaccacccc--aatgaagaaacgggaa 5333752  T
Q  102 gaaaaaacctagagaaagaaaattagggccggcttgttggagagggagag 151  Q
    || |||||||||||| | ||||||||||||||||||||||||||||||||    
T  5333753 gagaaaacctagagagaaaaaattagggccggcttgttggagagggagag 5333802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 38706834 - 38706949
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgta 100  Q
    |||||||||||||||||||||||||| |||||||||||||||||  |||||||| |  |||||||||||||||||||||||||||||||||||||  |||    
T  38706834 gaaaatcacttatttagattgaaatagagagaaaaagatgaagaagggtgattttagatcaagaattgacccaaaaccacccctcaatgaagaaacagta 38706933  T
Q  101 agaaaaaacctagaga 116  Q
    ||||||||||||||||    
T  38706934 agaaaaaacctagaga 38706949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 83; E-Value: 8e-39
Query Start/End: Original strand, 19 - 145
Target Start/End: Complemental strand, 868104 - 867978
Alignment:
Q  19 ttgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgtaagaaaaaacctagagaaa 118  Q
    |||||||| |||||||||||||||||| |||||||||| ||||||||| |||| ||||||||||||||||||||||| || |||| |||||||||||| |    
T  868104 ttgaaatagagagaaaaagatgaagaggggtgatttcatgtcaagaatcgacctaaaaccacccctcaatgaagaaactggaagagaaaacctagagaga 868005  T
Q  119 gaaaattagggccggcttgttggagag 145  Q
    ||||| |||||||||||| ||||||||    
T  868004 gaaaactagggccggctttttggagag 867978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 31381795 - 31381944
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgta 100  Q
    |||||||||||||||| ||||||| | ||||||||||||||  || |||||||||| ||||||||||||||||||||||||| |||| |||||||  |||    
T  31381795 gaaaatcacttatttaaattgaaaaagagagaaaaagatgagaaggggtgatttcaggtcaagaattgacccaaaaccacccatcaacgaagaaaccgta 31381894  T
Q  101 agaaaaaacctagagaaagaaaattagggccggcttgttggagagggaga 150  Q
    ||| |||| ||||||| ||||||||||| ||||||||| | |||||||||    
T  31381895 agagaaaatctagagagagaaaattaggaccggcttgtggaagagggaga 31381944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 2 - 118
Target Start/End: Original strand, 35965100 - 35965216
Alignment:
Q  2 aaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgtaa 101  Q
    ||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| || || |||||||||||||||||||||||||||||||  || ||    
T  35965100 aaaatcacttattcagattgaaatagagagaaaaagatgaagagaggtgatttcaggtaaaaaattgacccaaaaccacccctcaatgaagaatctggaa 35965199  T
Q  102 gaaaaaacctagagaaa 118  Q
    || ||||||||||||||    
T  35965200 gagaaaacctagagaaa 35965216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 34024560 - 34024675
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgta 100  Q
    |||||| ||||||||||||||||||| |||||||||||||||||| |||||||||| |||||||||||| ||||||||||||||||||||||||| |  |    
T  34024560 gaaaataacttatttagattgaaatagagagaaaaagatgaagaggggtgatttcaggtcaagaattgatccaaaaccacccctcaatgaagaaactaaa 34024659  T
Q  101 agaaaaaacctagaga 116  Q
    |||||||| |||||||    
T  34024660 agaaaaaatctagaga 34024675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 2 - 151
Target Start/End: Original strand, 10359671 - 10359821
Alignment:
Q  2 aaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaacca-cccctcaatgaagaaattgta 100  Q
    |||||||||||||||||| |||||| ||||||||||||||||   |||||||||| ||||| |||||||||||||||| |||||||||||||||| || |    
T  10359671 aaaatcacttatttagatcgaaatagagagaaaaagatgaagttgggtgatttcaggtcaaaaattgacccaaaaccaccccctcaatgaagaaactgaa 10359770  T
Q  101 agaaaaaacctagagaaagaaaattagggccggcttgttggagagggagag 151  Q
    ||| |||| ||||||| | ||||||| ||||  ||||||||||||||||||    
T  10359771 agagaaaatctagagagaaaaaattaaggccatcttgttggagagggagag 10359821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 3 - 139
Target Start/End: Complemental strand, 4643821 - 4643683
Alignment:
Q  3 aaatcacttatttagattgaaataaagagaaaaagatgaagagagg--tgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgta 100  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||  |||||||| ||||| |||| ||| ||||||||||||||||||||| | ||||    
T  4643821 aaatcacttatttagattgaaatagagagaaaaagatgaagaggggggtgatttcaggtcaaaaattcacctaaaaccacccctcaatgaagagactgta 4643722  T
Q  101 agaaaaaacctagagaaagaaaattagggccggcttgtt 139  Q
    ||| |||||||||| | |||||| |||||||| ||||||    
T  4643721 agagaaaacctagaaagagaaaactagggccgacttgtt 4643683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 56194564 - 56194417
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaac---cacccctcaatgaagaaatt 97  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||   |||||||| ||||||||||||||||||||   ||||||||||||||||||      
T  56194564 gaaagtcacttatttagattgaaatagagagaaaaagatgaagaggtttgatttcaggtcaagaattgacccaaaaccaccacccctcaatgaagaaacg 56194465  T
Q  98 gtaagaaaaaacctagagaaagaaaattagggccggcttgttggagag 145  Q
    | | || |||||||||||| | ||||||| || |||||||||||||||    
T  56194464 ggatgagaaaacctagagagaaaaaattaaggtcggcttgttggagag 56194417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 37188716 - 37188851
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgta 100  Q
    |||||||||||||||||||||||||| |||||||||||||||||   ||||||||| ||||| ||||||||||||||||| |||| ||||| ||  |  |    
T  37188716 gaaaatcacttatttagattgaaatatagagaaaaagatgaagatgagtgatttcaggtcaataattgacccaaaaccactcctcgatgaaaaatctaga 37188815  T
Q  101 agaaaaaacctagagaaagaaaattagggccggctt 136  Q
    ||| |||||||||||| |||||| ||||||||||||    
T  37188816 agagaaaacctagagagagaaaactagggccggctt 37188851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 42 - 139
Target Start/End: Complemental strand, 44947327 - 44947230
Alignment:
Q  42 agagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgtaagaaaaaacctagagaaagaaaattagggccggcttgtt 139  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||| ||||| |||||| |||||| |||| ||| ||||||    
T  44947327 agagaggtgatttcaggtcaagaattgacccaaaaccacccctcaatgaagaaactgtaagagaaaacttagagagagaaaactaggaccgacttgtt 44947230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 51317951 - 51317856
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtc-aagaattgacccaaaaccacccctcaatgaagaaa 95  Q
    |||||||||||||||||||||||||| |||||||||||||||||   ||||||||| ||| |||||||||||||||| ||||||||||||||||||    
T  51317951 gaaaatcacttatttagattgaaatagagagaaaaagatgaagatgagtgatttcaggtcaaagaattgacccaaaatcacccctcaatgaagaaa 51317856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 2 - 145
Target Start/End: Original strand, 18139038 - 18139180
Alignment:
Q  2 aaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgtaa 101  Q
    ||||||||||||||||||||||||| |||||||| |||||||||  |||||| || ||||| |||| ||| |||| |||||||||||||| |||||| ||    
T  18139038 aaaatcacttatttagattgaaatagagagaaaatgatgaagaggtgtgattccaggtcaaaaatttacctaaaatcacccctcaatgaa-aaattggaa 18139136  T
Q  102 g-aaaaaacctagagaaagaaaattagggccggcttgttggagag 145  Q
    |  |||||| |||||||| ||||||||||||| ||| ||||||||    
T  18139137 gtgaaaaacttagagaaa-aaaattagggccgacttattggagag 18139180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 2 - 145
Target Start/End: Original strand, 49126251 - 49126393
Alignment:
Q  2 aaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgtaa 101  Q
    ||||||||||||||||||||||||| |||||||| |||||||||  |||||| || ||||| |||| ||| |||| |||||||||||||| |||||| ||    
T  49126251 aaaatcacttatttagattgaaatagagagaaaatgatgaagaggtgtgattccaggtcaaaaatttacctaaaatcacccctcaatgaa-aaattggaa 49126349  T
Q  102 g-aaaaaacctagagaaagaaaattagggccggcttgttggagag 145  Q
    |  |||||| |||||||| ||||||||||||| ||| ||||||||    
T  49126350 gtgaaaaacttagagaaa-aaaattagggccgacttattggagag 49126393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 21090118 - 21089995
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaacca-cccctcaatgaagaaattgt 99  Q
    |||||||||||||||| ||||||||| |||||||||||||||||   |||||||||  ||||  ||||||||||||||| |||||||||||||||| |      
T  21090118 gaaaatcacttatttatattgaaatagagagaaaaagatgaagatgagtgatttcagatcaaagattgacccaaaaccaccccctcaatgaagaaactag 21090019  T
Q  100 aagaaaaaacctagagaaagaaaa 123  Q
    |||| |||||||||||| ||||||    
T  21090018 aagagaaaacctagagagagaaaa 21089995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 73 - 148
Target Start/End: Complemental strand, 29965568 - 29965493
Alignment:
Q  73 aaaaccacccctcaatgaagaaattgtaagaaaaaacctagagaaagaaaattagggccggcttgttggagaggga 148  Q
    ||||||||||||||||||| ||||||||||| |||||||||||| ||||||||||||||| |||||||||||||||    
T  29965568 aaaaccacccctcaatgaaaaaattgtaagagaaaacctagagagagaaaattagggccgacttgttggagaggga 29965493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 9 - 139
Target Start/End: Original strand, 27593970 - 27594098
Alignment:
Q  9 cttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgtaagaaaaaa 108  Q
    |||||||||||||||||| |||||||||||||||||| |||||||||| ||||| |||||||| |||| ||||| ||||||||| || || |||| ||||    
T  27593970 cttatttagattgaaatatagagaaaaagatgaagag-ggtgatttcatgtcaaaaattgacctaaaatcacccatcaatgaag-aagtggaagagaaaa 27594067  T
Q  109 cctagagaaagaaaattagggccggcttgtt 139  Q
    ||||||||   |||| ||||||||| |||||    
T  27594068 cctagagaggaaaaactagggccggtttgtt 27594098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 2 - 116
Target Start/End: Complemental strand, 12265419 - 12265304
Alignment:
Q  2 aaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaacca-cccctcaatgaagaaattgta 100  Q
    |||||||||||||||||||||||||  || |||||||||||||| |||||||||| ||||| |||||||| |||| || ||||| |||||||||| |  |    
T  12265419 aaaatcacttatttagattgaaatagggataaaaagatgaagaggggtgatttcaggtcaaaaattgaccaaaaatcacccccttaatgaagaaaattga 12265320  T
Q  101 agaaaaaacctagaga 116  Q
    ||| ||||||||||||    
T  12265319 agagaaaacctagaga 12265304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 2624463 - 2624318
Alignment:
Q  1 gaaaatcacttatttagattgaaataaag-agaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgt 99  Q
    |||||||||||||||||||||||||| |  | |||||||||| ||   || |||||| ||||| |||  |||||||| ||||||||||| |||||| |      
T  2624463 gaaaatcacttatttagattgaaatagactataaaaagatgatgatgagttatttcaggtcaaaaatcaacccaaaatcacccctcaataaagaaactag 2624364  T
Q  100 aagaaaaaacctagagaaagaaaattagggccggcttgttggagag 145  Q
    |||| |||||||||||| | |||| |||||||||||||||||||||    
T  2624363 aagagaaaacctagagagaaaaaactagggccggcttgttggagag 2624318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 48 - 123
Target Start/End: Complemental strand, 50179689 - 50179614
Alignment:
Q  48 gtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgtaagaaaaaacctagagaaagaaaa 123  Q
    ||||||||| || ||||||||||||||||||||||||||||| ||||| ||||||| |||| ||||||| ||||||    
T  50179689 gtgatttcaggttaagaattgacccaaaaccacccctcaatggagaaactgtaagagaaaagctagagagagaaaa 50179614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 2 - 76
Target Start/End: Original strand, 5333584 - 5333658
Alignment:
Q  2 aaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaa 76  Q
    ||||||||||||||| ||||||||| |||||||||||||||||   ||||||||| ||||| |||||||||||||    
T  5333584 aaaatcacttatttatattgaaatagagagaaaaagatgaagatgtgtgatttcaggtcaaaaattgacccaaaa 5333658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 35261157 - 35261038
Alignment:
Q  1 gaaaatcacttatttagattgaaataaaga-gaaaaagatgaagagagg----tgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaa 95  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||| ||    | |||||| ||||| ||||||||||||| || |||||||||||||||    
T  35261157 gaaaatcacttatttagattgcaataaagaggaaaaagatgaagaggggatgattatttcaggtcaaaaattgacccaaaatca-ccctcaatgaagaaa 35261059  T
Q  96 ttgtaagaaaaaacctagaga 116  Q
        |||| ||||||||||||    
T  35261058 cgagaagagaaaacctagaga 35261038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 49680502 - 49680458
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagag 45  Q
    ||||||||||||||| |||||||||||||||||||||||||||||    
T  49680502 gaaaatcacttatttggattgaaataaagagaaaaagatgaagag 49680458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 1008260 - 1008185
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaa 76  Q
    |||||||||||||||||||| ||||| ||||||||||||| |||   |||||||||||||||  ||||| ||||||    
T  1008260 gaaaatcacttatttagattaaaatagagagaaaaagatgcagatgagtgatttcaagtcaaatattgatccaaaa 1008185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 8009483 - 8009526
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaaga 44  Q
    |||||||||||||||||||||||||| |||||||||||||||||    
T  8009483 gaaaatcacttatttagattgaaatagagagaaaaagatgaaga 8009526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 108
Target Start/End: Original strand, 3338816 - 3338894
Alignment:
Q  30 agaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgtaagaaaaaa 108  Q
    |||||||||||||||  | |||||| | ||||| |||||||||||||||||| ||||||||||||| || |||| ||||    
T  3338816 agaaaaagatgaagattgatgattttaggtcaaaaattgacccaaaaccacctctcaatgaagaaactggaagagaaaa 3338894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 123
Target Start/End: Original strand, 52098044 - 52098165
Alignment:
Q  2 aaaatcacttatttagattgaaataaagagaaaaagatgaaga-gaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgta 100  Q
    |||||||||||||||||||||||||  ||||||| |||||| |  |||||||||||| |||| |||||| | |||||||| | ||||| || ||| || |    
T  52098044 aaaatcacttatttagattgaaatagggagaaaaggatgaacataaggtgatttcaaatcaaaaattgatctaaaaccacacatcaattaa-aaactgaa 52098142  T
Q  101 agaaaaaacctagagaaagaaaa 123  Q
    ||| ||||||||||  |||||||    
T  52098143 agagaaaacctagaagaagaaaa 52098165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 28 - 137
Target Start/End: Original strand, 1931854 - 1931963
Alignment:
Q  28 agagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgtaagaaaaaacctagagaaagaaaattag 127  Q
    |||||||||||||||||   ||||||||| || ||  |||||||| |||||||| ||||||||||||| |  |||| |||||||| ||| | |||| |||    
T  1931854 agagaaaaagatgaagatgagtgatttcaggttaaatattgacccgaaaccacctctcaatgaagaaactagaagagaaaacctaaagagaaaaaactag 1931953  T
Q  128 ggccggcttg 137  Q
     |||||||||    
T  1931954 agccggcttg 1931963  T

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Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 14183768 - 14183729
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatg 40  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  14183768 gaaaatcacttatttagattgaaatagagagaaaaagatg 14183729  T

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Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 29965599 - 29965565
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaa 35  Q
    |||||||||||||||||||||||||||||||||||    
T  29965599 gaaaatcacttatttagattgaaataaagagaaaa 29965565  T

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Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 49072881 - 49072922
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaa 42  Q
    ||||||||||||| |||||||||||||||||||||| |||||    
T  49072881 gaaaatcacttatatagattgaaataaagagaaaaatatgaa 49072922  T

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Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 22558625 - 22558713
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagag----aaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctc 85  Q
    ||||| |||||||||||||||||| ||| ||    ||||||||| ||||||||||||  | ||||| || ||||| |||||||||||||    
T  22558625 gaaaaccacttatttagattgaaagaaaaaggggaaaaaagatgtagagaggtgattctatgtcaaaaaatgacctaaaaccacccctc 22558713  T

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Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 53810976 - 53810889
Alignment:
Q  1 gaaaatcacttatttagattgaaataaa---gagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctc 85  Q
    |||||||||||||||| ||||||| |||   | |||||||||| |||| |||||||  | ||||| || ||||| |||||||||||||    
T  53810976 gaaaatcacttatttaaattgaaagaaaagggggaaaaagatgtagaggggtgattataggtcaaaaaatgacctaaaaccacccctc 53810889  T

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Target: scaffold0426 (Bit Score: 87; Significance: 3e-41; HSPs: 1)
Name: scaffold0426
Description:

Target: scaffold0426; HSP #1
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 6291 - 6142
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgta 100  Q
    ||||||||||||||||||||| |||| ||| |||||||||||||| |||||||| | ||||||||||||||  |||||| ||||||||||||||| || |    
T  6291 gaaaatcacttatttagattggaatagagaaaaaaagatgaagaggggtgattttaggtcaagaattgacctgaaacca-ccctcaatgaagaaactgga 6193  T
Q  101 agaaaaaacctagagaaagaaaattagggccggcttgttggagagggagag 151  Q
    ||| |||||||| ||| ||||||||||||||||||| ||||||||||||||    
T  6192 agagaaaacctaaagagagaaaattagggccggcttattggagagggagag 6142  T

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Target: scaffold0003 (Bit Score: 87; Significance: 3e-41; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 361920 - 362067
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgta 100  Q
    |||||| |||||||||||||||||||  |||||||||||| |||| |||||||||| ||||||||||||| |||||||||||||||||||||||| ||||    
T  361920 gaaaattacttatttagattgaaata--gagaaaaagatggagaggggtgatttcaggtcaagaattgactcaaaaccacccctcaatgaagaaactgta 362017  T
Q  101 agaaaaaacctagagaaagaaaattagggccggcttgttggagagggaga 150  Q
    ||| |||||||| ||| |||||| || ||||||||||||| || ||||||    
T  362018 agagaaaacctaaagagagaaaactaaggccggcttgttgaagggggaga 362067  T

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Target: scaffold0311 (Bit Score: 77; Significance: 3e-35; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 8673 - 8532
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgta 100  Q
    |||||||||||||||||||||||||| ||| ||||||||||| || ||||||||||||| ||||||| ||||||||||||||||||||||||||| || |    
T  8673 gaaaatcacttatttagattgaaatagagataaaaagatgaaaaggggtgatttcaagttaagaattaacccaaaaccacccctcaatgaagaaactgga 8574  T
Q  101 agaaaaaacctagagaaagaaaattagggccggcttgttggaga 144  Q
    ||| ||||||| |||  |||||  || |||||||||||| ||||    
T  8573 agagaaaacctggag--agaaatctaaggccggcttgttagaga 8532  T

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Target: scaffold0495 (Bit Score: 75; Significance: 5e-34; HSPs: 1)
Name: scaffold0495
Description:

Target: scaffold0495; HSP #1
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 6 - 145
Target Start/End: Complemental strand, 5346 - 5212
Alignment:
Q  6 tcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgtaagaaa 105  Q
    |||||||||||||||||| || ||||| |||||||||||| |||||||||| |||||||||||||||||||||||||| |||||||||||  | |||| |    
T  5346 tcacttatttagattgaagtagagagagaaagatgaagaggggtgatttcaggtcaagaattgacccaaaaccacccc-caatgaagaaacgggaagaga 5248  T
Q  106 aaacctagagaaagaaaattagggccggcttgttggagag 145  Q
    ||||||||||||     |||||||||||||||||||||||    
T  5247 aaacctagagaag----attagggccggcttgttggagag 5212  T

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Target: scaffold0231 (Bit Score: 52; Significance: 3e-20; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 81 - 156
Target Start/End: Complemental strand, 25736 - 25661
Alignment:
Q  81 ccctcaatgaagaaattgtaagaaaaaacctagagaaagaaaattagggccggcttgttggagagggagagattct 156  Q
    ||||||||||||||||||||||| ||| | ||||||||||||| || ||||||||||||||||||| |||||||||    
T  25736 ccctcaatgaagaaattgtaagagaaatcatagagaaagaaaactacggccggcttgttggagaggaagagattct 25661  T

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Target: scaffold0608 (Bit Score: 48; Significance: 6e-18; HSPs: 1)
Name: scaffold0608
Description:

Target: scaffold0608; HSP #1
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 48 - 123
Target Start/End: Complemental strand, 148 - 73
Alignment:
Q  48 gtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaattgtaagaaaaaacctagagaaagaaaa 123  Q
    ||||||||| || ||||||||||||||||||||||||||||| ||||| ||||||| |||| ||||||| ||||||    
T  148 gtgatttcaggttaagaattgacccaaaaccacccctcaatggagaaactgtaagagaaaagctagagagagaaaa 73  T

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Target: scaffold0146 (Bit Score: 43; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 16446 - 16528
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccc 83  Q
    |||||||||||||||||||||||||| ||||||| |||||||||    |||||| | |||||||||||||| | |||||||||    
T  16446 gaaaatcacttatttagattgaaatagagagaaacagatgaagatgaatgattttaggtcaagaattgacctagaaccacccc 16528  T

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Target: scaffold0264 (Bit Score: 39; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0264
Description:

Target: scaffold0264; HSP #1
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 20518 - 20610
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctcaatgaagaaa 95  Q
    |||||||||||||||||||| || || || |||||||||||  |  |||||||||| ||||| |||||||| ||||||||||||| |||||||||    
T  20518 gaaaatcacttatttagatttaa-tagagtgaaaaagatgacaatgggtgatttcaggtcaaaaattgacc-aaaaccacccctcgatgaagaaa 20610  T

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Target: scaffold0888 (Bit Score: 36; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0888
Description:

Target: scaffold0888; HSP #1
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 1836 - 1922
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagag--aaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctc 85  Q
    |||||||||||||||||||||||| |||| |  ||||||||| ||||||||||||  | ||||| |||||||| || | ||||||||    
T  1836 gaaaatcacttatttagattgaaagaaaggggaaaaaagatgcagagaggtgattctaggtcaaaaattgacctaatatcacccctc 1922  T

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Target: scaffold0014 (Bit Score: 36; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 201495 - 201534
Alignment:
Q  1 gaaaatcacttatttagattgaaataaagagaaaaagatg 40  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  201495 gaaaatcacttatttagattgaaatatagagaaaaagatg 201534  T

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Target: scaffold0009 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 85
Target Start/End: Original strand, 58243 - 58327
Alignment:
Q  3 aaatcacttatttagattgaaataaa--gagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctc 85  Q
    |||||||||||||||||||||| |||  || |||| |||| |||| |||||||| | ||||| || ||||| |||||||||||||    
T  58243 aaatcacttatttagattgaaagaaaaggaaaaaaggatgcagaggggtgattttaggtcaaaaaatgacctaaaaccacccctc 58327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 15419 - 15333
Alignment:
Q  1 gaaaatcacttatttagattgaaataaa--gagaaaaagatgaagagaggtgatttcaagtcaagaattgacccaaaaccacccctc 85  Q
    ||||| |||||||||||||||||| |||  | |||||||||| |||| |||||||  | ||||| || ||||| |||||||||||||    
T  15419 gaaaaccacttatttagattgaaagaaaaggggaaaaagatgtagaggggtgattctaggtcaaaaaatgacctaaaaccacccctc 15333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 57
Target Start/End: Original strand, 36810 - 36865
Alignment:
Q  2 aaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaa 57  Q
    ||||||||||||||| ||||||||| |  |||||||||||||| || |||||||||    
T  36810 aaaatcacttatttatattgaaatacaacgaaaaagatgaagacagatgatttcaa 36865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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