View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8402_low_4 (Length: 503)

Name: NF8402_low_4
Description: NF8402
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8402_low_4
NF8402_low_4
[»] chr6 (18 HSPs)
chr6 (1-387)||(348986-349379)
chr6 (1-248)||(33046984-33047231)
chr6 (260-387)||(2281033-2281160)
chr6 (260-370)||(29369411-29369521)
chr6 (260-370)||(29371966-29372076)
chr6 (273-387)||(29924870-29924984)
chr6 (260-369)||(24458749-24458858)
chr6 (260-369)||(33004671-33004780)
chr6 (384-493)||(349473-349582)
chr6 (260-334)||(33045715-33045789)
chr6 (134-229)||(25001580-25001675)
chr6 (133-209)||(25002543-25002619)
chr6 (384-438)||(2281256-2281310)
chr6 (384-436)||(24458972-24459024)
chr6 (387-437)||(33045544-33045594)
chr6 (384-436)||(29369246-29369298)
chr6 (400-436)||(29925096-29925132)
chr6 (384-436)||(33004504-33004556)
[»] scaffold0119 (4 HSPs)
scaffold0119 (1-387)||(27939-28324)
scaffold0119 (1-387)||(34340-34726)
scaffold0119 (387-437)||(27781-27831)
scaffold0119 (384-437)||(34190-34243)
[»] chr2 (50 HSPs)
chr2 (1-387)||(1272767-1273152)
chr2 (1-234)||(207273-207506)
chr2 (1-246)||(2299471-2299716)
chr2 (1-248)||(182782-183029)
chr2 (1-248)||(2448016-2448263)
chr2 (1-248)||(977287-977534)
chr2 (32-248)||(13904009-13904225)
chr2 (260-387)||(25647604-25647731)
chr2 (267-387)||(6123811-6123931)
chr2 (260-387)||(207838-207965)
chr2 (260-387)||(1512864-1512991)
chr2 (260-387)||(2300909-2301036)
chr2 (260-387)||(5013448-5013575)
chr2 (264-387)||(13905424-13905546)
chr2 (260-387)||(40605460-40605587)
chr2 (264-375)||(1916702-1916813)
chr2 (260-375)||(27997384-27997499)
chr2 (260-375)||(28098754-28098869)
chr2 (260-387)||(13908352-13908479)
chr2 (260-375)||(20890771-20890886)
chr2 (260-387)||(26455998-26456125)
chr2 (260-375)||(36437536-36437651)
chr2 (260-370)||(19821995-19822105)
chr2 (260-370)||(19842216-19842326)
chr2 (260-375)||(35432068-35432184)
chr2 (260-375)||(42109363-42109478)
chr2 (260-334)||(184224-184298)
chr2 (260-334)||(2449458-2449532)
chr2 (260-334)||(976020-976092)
chr2 (387-437)||(1273260-1273310)
chr2 (342-387)||(21589025-21589070)
chr2 (384-434)||(1916543-1916593)
chr2 (384-437)||(19822218-19822271)
chr2 (384-437)||(19842439-19842492)
chr2 (384-436)||(26456221-26456273)
chr2 (384-436)||(40605683-40605735)
chr2 (384-437)||(208060-208113)
chr2 (384-437)||(21588876-21588929)
chr2 (384-436)||(27997223-27997275)
chr2 (384-436)||(28098593-28098645)
chr2 (387-437)||(975850-975900)
chr2 (387-437)||(2449653-2449703)
chr2 (387-437)||(25647831-25647881)
chr2 (384-438)||(36437373-36437427)
chr2 (387-436)||(184419-184468)
chr2 (400-437)||(1513103-1513140)
chr2 (400-437)||(6124043-6124080)
chr2 (400-436)||(5013301-5013337)
chr2 (384-436)||(13908576-13908628)
chr2 (384-436)||(35431907-35431959)
[»] chr1 (40 HSPs)
chr1 (1-248)||(49788558-49788805)
chr1 (5-248)||(2048703-2048946)
chr1 (5-248)||(36868115-36868358)
chr1 (1-248)||(7479161-7479408)
chr1 (1-234)||(45503873-45504106)
chr1 (260-387)||(2047381-2047508)
chr1 (260-387)||(36866792-36866919)
chr1 (260-387)||(2045130-2045257)
chr1 (260-387)||(45503414-45503541)
chr1 (260-387)||(50708966-50709093)
chr1 (260-387)||(29245545-29245672)
chr1 (260-375)||(38210887-38211002)
chr1 (260-387)||(49787240-49787365)
chr1 (260-387)||(13926183-13926310)
chr1 (260-387)||(26211745-26211871)
chr1 (260-375)||(45501181-45501296)
chr1 (260-387)||(48651109-48651235)
chr1 (260-370)||(48960817-48960927)
chr1 (260-369)||(15691563-15691672)
chr1 (260-375)||(39513149-39513264)
chr1 (260-334)||(7480603-7480677)
chr1 (260-334)||(9533979-9534053)
chr1 (260-334)||(42496687-42496761)
chr1 (148-246)||(37901527-37901625)
chr1 (384-446)||(2044972-2045034)
chr1 (384-436)||(38210726-38210778)
chr1 (384-437)||(45501019-45501072)
chr1 (384-437)||(48961039-48961092)
chr1 (384-436)||(15691786-15691838)
chr1 (384-436)||(36461727-36461779)
chr1 (384-436)||(48651330-48651382)
chr1 (384-436)||(50709189-50709241)
chr1 (387-437)||(9534174-9534224)
chr1 (387-437)||(42496882-42496932)
chr1 (400-437)||(2047232-2047269)
chr1 (387-436)||(7480798-7480847)
chr1 (408-437)||(8998869-8998898)
chr1 (400-437)||(49787091-49787128)
chr1 (400-436)||(36866644-36866680)
chr1 (408-436)||(37891235-37891263)
[»] chr7 (35 HSPs)
chr7 (1-248)||(17695563-17695810)
chr7 (1-234)||(32659752-32659985)
chr7 (1-248)||(27714593-27714840)
chr7 (1-248)||(7887515-7887762)
chr7 (260-387)||(20955640-20955767)
chr7 (260-387)||(31100228-31100355)
chr7 (260-387)||(7893847-7893974)
chr7 (260-387)||(17697005-17697132)
chr7 (260-387)||(26168934-26169061)
chr7 (260-387)||(27716034-27716160)
chr7 (260-387)||(29956567-29956694)
chr7 (260-387)||(45115920-45116047)
chr7 (267-387)||(16719998-16720118)
chr7 (260-387)||(22007070-22007197)
chr7 (260-387)||(32660314-32660441)
chr7 (260-387)||(32038533-32038660)
chr7 (260-370)||(13398312-13398422)
chr7 (260-375)||(46909438-46909552)
chr7 (260-370)||(5093660-5093770)
chr7 (260-334)||(7888957-7889031)
chr7 (384-436)||(31100452-31100504)
chr7 (384-437)||(29956791-29956844)
chr7 (384-436)||(7894070-7894122)
chr7 (387-436)||(7889152-7889201)
chr7 (400-437)||(16720230-16720267)
chr7 (400-437)||(17697244-17697281)
chr7 (384-437)||(22007294-22007347)
chr7 (384-437)||(32660536-32660589)
chr7 (384-437)||(46909661-46909714)
chr7 (384-436)||(13398146-13398198)
chr7 (384-436)||(32038757-32038809)
chr7 (384-438)||(20955490-20955544)
chr7 (384-437)||(5093884-5093937)
chr7 (400-437)||(27716271-27716308)
chr7 (387-436)||(45116146-45116195)
[»] chr4 (28 HSPs)
chr4 (1-248)||(21582821-21583068)
chr4 (1-234)||(30388370-30388603)
chr4 (260-387)||(25839409-25839536)
chr4 (260-387)||(16909147-16909274)
chr4 (260-387)||(28389494-28389621)
chr4 (260-387)||(52682824-52682951)
chr4 (260-387)||(19515109-19515236)
chr4 (260-387)||(21581499-21581626)
chr4 (260-387)||(21382741-21382867)
chr4 (260-387)||(41859754-41859881)
chr4 (260-369)||(42347830-42347939)
chr4 (260-387)||(29359095-29359222)
chr4 (260-387)||(30387911-30388038)
chr4 (260-370)||(53288400-53288510)
chr4 (272-367)||(31448356-31448453)
chr4 (384-437)||(52683047-52683100)
chr4 (384-437)||(16909370-16909423)
chr4 (384-437)||(21382962-21383015)
chr4 (400-437)||(21581350-21581387)
chr4 (384-437)||(28389717-28389770)
chr4 (400-436)||(19514961-19514997)
chr4 (384-436)||(31448188-31448240)
chr4 (384-436)||(42348054-42348106)
chr4 (387-437)||(25839636-25839686)
chr4 (400-437)||(29358946-29358983)
chr4 (384-437)||(30387763-30387816)
chr4 (384-437)||(41859605-41859658)
chr4 (384-437)||(53288624-53288677)
[»] chr8 (27 HSPs)
chr8 (1-248)||(407363-407610)
chr8 (1-248)||(18267202-18267449)
chr8 (1-234)||(22730227-22730460)
chr8 (260-387)||(406045-406172)
chr8 (260-387)||(18265883-18266010)
chr8 (260-387)||(18274896-18275023)
chr8 (260-387)||(14994361-14994488)
chr8 (260-387)||(23827850-23827977)
chr8 (260-387)||(19961719-19961846)
chr8 (260-387)||(22729768-22729895)
chr8 (260-387)||(41376302-41376429)
chr8 (260-370)||(18492391-18492501)
chr8 (260-375)||(37983340-37983455)
chr8 (281-387)||(21639991-21640097)
chr8 (260-375)||(24011751-24011864)
chr8 (148-246)||(18287288-18287386)
chr8 (384-437)||(24011590-24011643)
chr8 (384-438)||(22729619-22729673)
chr8 (384-437)||(37983179-37983232)
chr8 (384-436)||(14994215-14994267)
chr8 (384-436)||(19961942-19961994)
chr8 (408-438)||(18272787-18272817)
chr8 (384-434)||(21640192-21640242)
chr8 (408-438)||(34893022-34893052)
chr8 (400-437)||(405896-405933)
chr8 (384-437)||(18492613-18492666)
chr8 (400-437)||(41376154-41376191)
[»] chr3 (54 HSPs)
chr3 (1-248)||(4592774-4593021)
chr3 (1-248)||(26946510-26946757)
chr3 (1-234)||(49562749-49562982)
chr3 (1-239)||(35715847-35716085)
chr3 (1-234)||(36087930-36088163)
chr3 (32-248)||(16650113-16650329)
chr3 (32-248)||(13456086-13456303)
chr3 (260-387)||(13454764-13454891)
chr3 (260-387)||(36947038-36947165)
chr3 (260-387)||(4594216-4594343)
chr3 (260-383)||(12825304-12825427)
chr3 (260-387)||(16651524-16651651)
chr3 (260-387)||(52418676-52418803)
chr3 (267-387)||(12260939-12261059)
chr3 (260-387)||(26951611-26951738)
chr3 (260-387)||(38655804-38655931)
chr3 (260-387)||(18198807-18198934)
chr3 (264-387)||(35716417-35716540)
chr3 (260-387)||(36087471-36087598)
chr3 (260-375)||(11826580-11826695)
chr3 (260-387)||(31487328-31487454)
chr3 (260-387)||(36091309-36091436)
chr3 (260-387)||(49562290-49562417)
chr3 (260-380)||(33003773-33003893)
chr3 (260-387)||(854679-854806)
chr3 (260-375)||(859939-860054)
chr3 (260-334)||(26947952-26948026)
chr3 (324-387)||(29864707-29864770)
chr3 (309-370)||(47726776-47726837)
chr3 (148-246)||(18207143-18207241)
chr3 (133-209)||(16472677-16472753)
chr3 (384-436)||(36946889-36946941)
chr3 (384-437)||(35716635-35716688)
chr3 (384-437)||(43508613-43508666)
chr3 (384-436)||(854903-854955)
chr3 (384-436)||(11826803-11826855)
chr3 (384-436)||(18199030-18199082)
chr3 (384-436)||(31487549-31487601)
chr3 (384-436)||(36087324-36087376)
chr3 (384-436)||(49562143-49562195)
chr3 (384-435)||(33003622-33003673)
chr3 (384-434)||(860163-860213)
chr3 (400-437)||(4594455-4594492)
chr3 (387-436)||(26948147-26948196)
chr3 (400-436)||(12261171-12261207)
chr3 (400-436)||(12825543-12825579)
chr3 (400-436)||(13454616-13454652)
chr3 (400-436)||(16651763-16651799)
chr3 (408-436)||(18256607-18256635)
chr3 (384-436)||(26951834-26951886)
chr3 (400-436)||(29864559-29864595)
chr3 (400-436)||(36091161-36091197)
chr3 (400-436)||(38655655-38655691)
chr3 (384-436)||(47726949-47727001)
[»] chr5 (26 HSPs)
chr5 (1-248)||(23182653-23182900)
chr5 (1-248)||(23186920-23187167)
chr5 (1-248)||(34759914-34760161)
chr5 (1-248)||(12653868-12654115)
chr5 (1-248)||(39876748-39876995)
chr5 (32-248)||(20106297-20106513)
chr5 (32-248)||(30091557-30091773)
chr5 (32-248)||(3609142-3609359)
chr5 (260-387)||(3607820-3607947)
chr5 (260-387)||(30090235-30090362)
chr5 (260-387)||(20104976-20105102)
chr5 (260-387)||(32674988-32675114)
chr5 (260-334)||(12655310-12655384)
chr5 (260-334)||(23184095-23184169)
chr5 (260-334)||(23188362-23188436)
chr5 (260-334)||(34761356-34761430)
chr5 (260-334)||(39878190-39878264)
chr5 (387-437)||(12655504-12655554)
chr5 (387-437)||(34761551-34761601)
chr5 (387-437)||(39878385-39878435)
chr5 (400-437)||(3607671-3607708)
chr5 (400-437)||(20104827-20104864)
chr5 (387-436)||(23184290-23184339)
chr5 (387-436)||(23188557-23188606)
chr5 (400-437)||(30090086-30090123)
chr5 (384-437)||(32675211-32675264)
[»] scaffold0642 (3 HSPs)
scaffold0642 (1-248)||(2049-2295)
scaffold0642 (260-387)||(3489-3616)
scaffold0642 (400-437)||(3728-3765)
[»] scaffold0105 (3 HSPs)
scaffold0105 (1-248)||(26774-27020)
scaffold0105 (260-387)||(25453-25580)
scaffold0105 (400-437)||(25304-25341)
[»] scaffold0345 (3 HSPs)
scaffold0345 (1-248)||(11960-12207)
scaffold0345 (260-387)||(13401-13528)
scaffold0345 (400-437)||(13640-13677)
[»] scaffold0121 (1 HSPs)
scaffold0121 (260-387)||(45667-45794)
[»] scaffold0097 (6 HSPs)
scaffold0097 (260-387)||(51799-51925)
scaffold0097 (260-387)||(48976-49103)
scaffold0097 (260-334)||(40379-40453)
scaffold0097 (384-437)||(48827-48880)
scaffold0097 (387-437)||(40208-40258)
scaffold0097 (384-436)||(51652-51704)
[»] scaffold0374 (2 HSPs)
scaffold0374 (260-374)||(2061-2175)
scaffold0374 (384-437)||(2284-2337)
[»] scaffold0521 (1 HSPs)
scaffold0521 (148-246)||(37-135)


Alignment Details
Target: chr6 (Bit Score: 340; Significance: 0; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 340; E-Value: 0
Query Start/End: Original strand, 1 - 387
Target Start/End: Original strand, 348986 - 349379
Alignment:
Q  1 cccactagcatcattttcatgaacatgttactggtcgatgaaaaagtttctacatgtttgcactcttagctttaaaattaaactaatgtcatcgttgatt 100  Q
    |||||| ||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  348986 cccactggcatcattttcatgaacatgttattggtcgatgaaaaggtttctacatgtttgcactcttggctttaaaattaaactaatgtcatcgttgatt 349085  T
Q  101 tttagttatgtaatttaaccagttgtttactgatgttgttgtcgttaatagggtggacgtattcacgc-------cacagctaaaaaagatttggtggca 193  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||       |||||||| ||||||||||||||||    
T  349086 tttagttatgtaatttaaccagttgtttactgatgttgttgtcgtcaatagggtggacgtattcacgcctgacgccacagctagaaaagatttggtggca 349185  T
Q  194 aagttcaggtccatgggtgaagaagggggtacatatcagcttgaaaatgcaattgcagggaaatcaaatgtgtaggacttttttgtgtactattcatttt 293  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  349186 aagttcaggtccatgggtgaagaagggggtacatatcagcttgaaaatgcaattgtagggaaatcaaatgtgtaggacttttttgtgtactattcatttt 349285  T
Q  294 cttacttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatattaaagtaacaggaactacgtactagaat 387  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  349286 cttacttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatattaaagtaacaggaactacgtactagaat 349379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 1 - 248
Target Start/End: Complemental strand, 33047231 - 33046984
Alignment:
Q  1 cccactagcatcattttcatgaacatgttactggtcgatgaaaaagtttctacatgtttgcactcttagctttaaaattaaactaatgtcatcgttgatt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| ||||||||||||| |||||||||  ||| ||    
T  33047231 cccactagcatcattttcatgaacatgttactggtcgatgaaaaggtttctgcatgtttgcactcttaactttaaaattaaagtaatgtcatttttgttt 33047132  T
Q  101 tttagttatgtaatttaaccagttgtttactgatgttgttgtcgttaatagggtggacgtattcacgccacagctaaaaaagatttggtggcaaagttca 200  Q
    |||||||||||||||||||||| |||||| || |||||||||||| || ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  33047131 tttagttatgtaatttaaccagctgtttaatgttgttgttgtcgtcaacagggtggacgtattcacgccacagctagaaaagatttggtggcaaagttca 33047032  T
Q  201 ggtccatgggtgaagaagggggtacatatcagcttgaaaatgcaattg 248  Q
    ||||||||| | ||||||||||||||||||||||||||||||||||||    
T  33047031 ggtccatggttcaagaagggggtacatatcagcttgaaaatgcaattg 33046984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 260 - 387
Target Start/End: Original strand, 2281033 - 2281160
Alignment:
Q  260 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatat 359  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| |    
T  2281033 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcaatttccctttcaaaattatatgttattt 2281132  T
Q  360 taaagtaacaggaactacgtactagaat 387  Q
    ||||||||||||||||||||||||||||    
T  2281133 taaagtaacaggaactacgtactagaat 2281160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 260 - 370
Target Start/End: Complemental strand, 29369521 - 29369411
Alignment:
Q  260 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatat 359  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  29369521 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaattatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatgt 29369422  T
Q  360 taaagtaacag 370  Q
    |||||||||||    
T  29369421 taaagtaacag 29369411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 260 - 370
Target Start/End: Complemental strand, 29372076 - 29371966
Alignment:
Q  260 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatat 359  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  29372076 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaattatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatgt 29371977  T
Q  360 taaagtaacag 370  Q
    |||||||||||    
T  29371976 taaagtaacag 29371966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 273 - 387
Target Start/End: Original strand, 29924870 - 29924984
Alignment:
Q  273 tttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatattaaagtaacagga 372  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||| ||    
T  29924870 tttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaatttcagtttcccttttaaaattatatgttatgttaaagtaacaaga 29924969  T
Q  373 actacgtactagaat 387  Q
    |||||||||||||||    
T  29924970 actacgtactagaat 29924984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 260 - 369
Target Start/End: Original strand, 24458749 - 24458858
Alignment:
Q  260 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatat 359  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  24458749 aatgtgtatgacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatgt 24458848  T
Q  360 taaagtaaca 369  Q
    ||||||||||    
T  24458849 taaagtaaca 24458858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 260 - 369
Target Start/End: Complemental strand, 33004780 - 33004671
Alignment:
Q  260 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatat 359  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |    
T  33004780 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacaaacttcagtttcccttttaaaattatatgttatgt 33004681  T
Q  360 taaagtaaca 369  Q
    ||||||||||    
T  33004680 taaagtaaca 33004671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 384 - 493
Target Start/End: Original strand, 349473 - 349582
Alignment:
Q  384 gaatattaacttcttaaaatgatatgtgcgttagcacgggtcaatggtctagttggctttaaataccataagtgtgtagtagggtaaaagccgaataggt 483  Q
    |||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  349473 gaatattaactttttaaaatgatatgtgcgttagcacggatcaatggtctagttggctttaaataccataagtgtgtagtagggtaaaagccgaataagt 349572  T
Q  484 ttttctctct 493  Q
    ||||||||||    
T  349573 ttttctctct 349582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 260 - 334
Target Start/End: Complemental strand, 33045789 - 33045715
Alignment:
Q  260 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtt 334  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  33045789 aatgtgtaggacttttttgggtactattcattttcttacttattgaaagtatttgcatgtcaacgaacttcagtt 33045715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 134 - 229
Target Start/End: Original strand, 25001580 - 25001675
Alignment:
Q  134 tgttgttgtcgttaatagggtggacgtattcacgccacagctaaaaaagatttggtggcaaagttcaggtccatgggtgaagaagggggtacatat 229  Q
    |||||||||| |  ||||||||||||||| |||||||| | || |||||| |||||||||||||||||||| |||| |||  ||||||||||||||    
T  25001580 tgttgttgtcatctatagggtggacgtatccacgccacggttagaaaagaattggtggcaaagttcaggtcaatggttgagaaagggggtacatat 25001675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 133 - 209
Target Start/End: Complemental strand, 25002619 - 25002543
Alignment:
Q  133 atgttgttgtcgttaatagggtggacgtattcacgccacagctaaaaaagatttggtggcaaagttcaggtccatgg 209  Q
    ||||||||||| |  ||||||||||||||| ||| |||| | || |||||| |||||||||||||||||||| ||||    
T  25002619 atgttgttgtcatctatagggtggacgtatccacaccacggttagaaaagaattggtggcaaagttcaggtcaatgg 25002543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 438
Target Start/End: Original strand, 2281256 - 2281310
Alignment:
Q  384 gaatattaacttcttaaaatgatatgtgcgttagcacgggtcaatggtctagttg 438  Q
    |||||||| ||| || |||||| | ||||||||||||||||||||||||||||||    
T  2281256 gaatattatcttttttaaatgacacgtgcgttagcacgggtcaatggtctagttg 2281310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 384 - 436
Target Start/End: Original strand, 24458972 - 24459024
Alignment:
Q  384 gaatattaacttcttaaaatgatatgtgcgttagcacgggtcaatggtctagt 436  Q
    ||||||| ||||||||||||||   ||||||||||| ||||||||||||||||    
T  24458972 gaatatttacttcttaaaatgacccgtgcgttagcatgggtcaatggtctagt 24459024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 387 - 437
Target Start/End: Complemental strand, 33045594 - 33045544
Alignment:
Q  387 tattaacttcttaaaatgatatgtgcgttagcacgggtcaatggtctagtt 437  Q
    |||||| || || |||||| | |||||||||||||||||||||||||||||    
T  33045594 tattaatttttttaaatgacacgtgcgttagcacgggtcaatggtctagtt 33045544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 384 - 436
Target Start/End: Complemental strand, 29369298 - 29369246
Alignment:
Q  384 gaatattaacttcttaaaatgatatgtgcgttagcacgggtcaatggtctagt 436  Q
    ||||||| ||||||||||||||   ||||||||||| |||| |||||||||||    
T  29369298 gaatatttacttcttaaaatgacccgtgcgttagcatgggttaatggtctagt 29369246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 400 - 436
Target Start/End: Original strand, 29925096 - 29925132
Alignment:
Q  400 aaatgatatgtgcgttagcacgggtcaatggtctagt 436  Q
    |||||| | ||||||||||||||||||||||||||||    
T  29925096 aaatgacacgtgcgttagcacgggtcaatggtctagt 29925132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 384 - 436
Target Start/End: Complemental strand, 33004556 - 33004504
Alignment:
Q  384 gaatattaacttcttaaaatgatatgtgcgttagcacgggtcaatggtctagt 436  Q
    ||||||| ||||||||||||||   ||| ||||||| ||||||||||||||||    
T  33004556 gaatatttacttcttaaaatgaaccgtgtgttagcatgggtcaatggtctagt 33004504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 327; Significance: 0; HSPs: 4)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 327; E-Value: 0
Query Start/End: Original strand, 1 - 387
Target Start/End: Complemental strand, 28324 - 27939
Alignment:
Q  1 cccactagcatcattttcatgaacatgttactggtcgatgaaaaagtttctacatgtttgcactcttagctttaaaattaaactaatgtcatcgttgatt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||    
T  28324 cccactagcatcattttcatgaacatgttactggtcgatgaaaaggtttctacatgtttgcactcttatctttaaaattaaactaatgtcatcgttgttt 28225  T
Q  101 tttagttatgtaatttaaccagttgtttactgatgttgttgtcgttaatagggtggacgtattcacgccacagctaaaaaagatttggtggcaaagttca 200  Q
    |||||||||||||||||||||||||||||||| ||||||| |||| ||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  28224 tttagttatgtaatttaaccagttgtttactgctgttgtt-tcgtcaatagggtggatgtattcacgccacagctagaaaagatttggtggcaaagttca 28126  T
Q  201 ggtccatgggtgaagaagggggtacatatcagcttgaaaatgcaattgcagggaaatcaaatgtgtaggacttttttgtgtactattcattttcttactt 300  Q
    ||||||||||| |||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28125 ggtccatgggtaaagaagggggtacatatcagcttgaaaatgcaatcgtagggaaatcaaatgtgtaggacttttttgtgtactattcattttcttactt 28026  T
Q  301 attgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatattaaagtaacaggaactacgtactagaat 387  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  28025 attgaaactatatgcatgtcaacaaacttcagtttcccttttaaaattatatgttatgttaaagtaacaggaactacgtactagaat 27939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119; HSP #2
Raw Score: 319; E-Value: 1e-180
Query Start/End: Original strand, 1 - 387
Target Start/End: Complemental strand, 34726 - 34340
Alignment:
Q  1 cccactagcatcattttcatgaacatgttactggtcgatgaaaaagtttctacatgtttgcactcttagctttaaaattaaactaatgtcatcgttgatt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| |||| ||    
T  34726 cccactagcatcattttcatgaacatgttactggtcgatgaaaaggtttctacatgtttgcactcttaactttaaaattaaactaatgtcattgttgttt 34627  T
Q  101 tttagttatgtaatttaaccagttgtttactgatgttgttgtcgttaatagggtggacgtattcacgccacagctaaaaaagatttggtggcaaagttca 200  Q
    |||||||||||||||||||||| |||||| || | |||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  34626 tttagttatgtaatttaaccagctgtttattgtttttgttgtcgtcaatagggtggacgtattcacgccacagctagaaaagatttggtggcaaagttca 34527  T
Q  201 ggtccatgggtgaagaagggggtacatatcagcttgaaaatgcaattgcagggaaatcaaatgtgtaggacttttttgtgtactattcattttcttactt 300  Q
    |||||||||||||||| |||||||||||||||||||||||||||||   ||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  34526 ggtccatgggtgaagaggggggtacatatcagcttgaaaatgcaatcatagggaaatcaaatgtgtaggagttttttgtgtactattcattttcttactt 34427  T
Q  301 attgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatattaaagtaacaggaactacgtactagaat 387  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  34426 attgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattaaatgttatgttaaagtaacaggaactacgtactagaat 34340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 387 - 437
Target Start/End: Complemental strand, 27831 - 27781
Alignment:
Q  387 tattaacttcttaaaatgatatgtgcgttagcacgggtcaatggtctagtt 437  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  27831 tattaacttcttaaaatgacctgtgcgttagcacgggtcaatggtctagtt 27781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 384 - 437
Target Start/End: Complemental strand, 34243 - 34190
Alignment:
Q  384 gaatattaacttcttaaaatgatatgtgcgttagcacgggtcaatggtctagtt 437  Q
    ||||||||||||||||||||||   |||||||||||||||||||| ||||||||    
T  34243 gaatattaacttcttaaaatgacccgtgcgttagcacgggtcaattgtctagtt 34190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 327; Significance: 0; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 327; E-Value: 0
Query Start/End: Original strand, 1 - 387
Target Start/End: Original strand, 1272767 - 1273152
Alignment:
Q  1 cccactagcatcattttcatgaacatgttactggtcgatgaaaaagtttctacatgtttgcactcttagctttaaaattaaactaatgtcatcgttgatt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||    
T  1272767 cccactagcatcattttcatgaacatgttactggtcgatgaaaaggtttctacatgtttgcactcttaactttaaaattaaactaatgtcatcgttgttt 1272866  T
Q  101 tttagttatgtaatttaaccagttgtttactgatgttgttgtcgttaatagggtggacgtattcacgccacagctaaaaaagatttggtggcaaagttca 200  Q
    |||||||||||||||||||||||||||||||| ||||||| |||| ||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  1272867 tttagttatgtaatttaaccagttgtttactgctgttgtt-tcgtcaatagggtggatgtattcacgccacagctagaaaagatttggtggcaaagttca 1272965  T
Q  201 ggtccatgggtgaagaagggggtacatatcagcttgaaaatgcaattgcagggaaatcaaatgtgtaggacttttttgtgtactattcattttcttactt 300  Q
    ||||||||||| |||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1272966 ggtccatgggtaaagaagggggtacatatcagcttgaaaatgcaatcgtagggaaatcaaatgtgtaggacttttttgtgtactattcattttcttactt 1273065  T
Q  301 attgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatattaaagtaacaggaactacgtactagaat 387  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  1273066 attgaaactatatgcatgtcaacaaacttcagtttcccttttaaaattatatgttatgttaaagtaacaggaactacgtactagaat 1273152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 1 - 234
Target Start/End: Original strand, 207273 - 207506
Alignment:
Q  1 cccactagcatcattttcatgaacatgttactggtcgatgaaaaagtttctacatgtttgcactcttagctttaaaattaaactaatgtcatcgttgatt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||    
T  207273 cccactagcatcattttcatgaacatgttactggtcgatgaaaaggtttctatatgtttgcactcttagctttaaaattaaactaatgtcatcgttgttt 207372  T
Q  101 tttagttatgtaatttaaccagttgtttactgatgttgttgtcgttaatagggtggacgtattcacgccacagctaaaaaagatttggtggcaaagttca 200  Q
    |||||||||||||||||||||| |||||| || ||||||| |||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  207373 tttagttatgtaatttaaccagctgtttaatgttgttgttttcgtcaatagggtggacgtattcacgccacagctagaaaagatttggtggcaaagttca 207472  T
Q  201 ggtccatgggtgaagaagggggtacatatcagct 234  Q
    ||||||||| ||||||||||||||||||||||||    
T  207473 ggtccatggttgaagaagggggtacatatcagct 207506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 2299471 - 2299716
Alignment:
Q  1 cccactagcatcattttcatgaacatgttactggtcgatgaaaaagtttctacatgtttgcactcttagctttaaaattaaactaatgtcatcgttgatt 100  Q
    |||||||||||||||||||||||||||||| ||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| |||| ||    
T  2299471 cccactagcatcattttcatgaacatgttagtggtcgatgaaaaggtttctgcatgtttgcactcttagctttaaaattaaactaatgtcattgttgttt 2299570  T
Q  101 tttagttatgtaatttaaccagttgtttactgatgttgttgtcgttaatagggtggacgtattcacgccacagctaaaaaagatttggtggcaaagttca 200  Q
    |||||||||||||||||||||| |||||| || |||||||||||| |||||||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  2299571 tttagttatgtaatttaaccagctgtttaatgttgttgttgtcgtcaatagggtggacgtattcacgccacatctagaaaagatttggtggcaaagttca 2299670  T
Q  201 ggtccatgggtgaagaagggggtacatatcagcttgaaaatgcaat 246  Q
    ||||||||| | ||||||||||||||||||||||||||||||||||    
T  2299671 ggtccatggttcaagaagggggtacatatcagcttgaaaatgcaat 2299716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 1 - 248
Target Start/End: Original strand, 182782 - 183029
Alignment:
Q  1 cccactagcatcattttcatgaacatgttactggtcgatgaaaaagtttctacatgtttgcactcttagctttaaaattaaactaatgtcatcgttgatt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| ||||||||||||| |||||||||  ||| ||    
T  182782 cccactagcatcattttcatgaacatgttactggtcgatgaaaaggtttctgcatgtttgcactcttaactttaaaattaaagtaatgtcatttttgttt 182881  T
Q  101 tttagttatgtaatttaaccagttgtttactgatgttgttgtcgttaatagggtggacgtattcacgccacagctaaaaaagatttggtggcaaagttca 200  Q
    |||||||||||||||||||||| |||||| || |||||||||||| || ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  182882 tttagttatgtaatttaaccagctgtttaatgttgttgttgtcgtcaacagggtggacgtattcacgccacagctagaaaagatttggtggcaaagttca 182981  T
Q  201 ggtccatgggtgaagaagggggtacatatcagcttgaaaatgcaattg 248  Q
    ||||||||| | ||||||||||||||||||||||||||||||||||||    
T  182982 ggtccatggttcaagaagggggtacatatcagcttgaaaatgcaattg 183029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 1 - 248
Target Start/End: Original strand, 2448016 - 2448263
Alignment:
Q  1 cccactagcatcattttcatgaacatgttactggtcgatgaaaaagtttctacatgtttgcactcttagctttaaaattaaactaatgtcatcgttgatt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| ||||||||||||| |||||||||  ||| ||    
T  2448016 cccactagcatcattttcatgaacatgttactggtcgatgaaaaggtttctgcatgtttgcactcttaactttaaaattaaagtaatgtcatttttgttt 2448115  T
Q  101 tttagttatgtaatttaaccagttgtttactgatgttgttgtcgttaatagggtggacgtattcacgccacagctaaaaaagatttggtggcaaagttca 200  Q
    |||||||||||||||||||||| |||||| || |||||||||||| || ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  2448116 tttagttatgtaatttaaccagctgtttaatgttgttgttgtcgtcaacagggtggacgtattcacgccacagctagaaaagatttggtggcaaagttca 2448215  T
Q  201 ggtccatgggtgaagaagggggtacatatcagcttgaaaatgcaattg 248  Q
    ||||||||| | ||||||||||||||||||||||||||||||||||||    
T  2448216 ggtccatggttcaagaagggggtacatatcagcttgaaaatgcaattg 2448263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 1 - 248
Target Start/End: Complemental strand, 977534 - 977287
Alignment:
Q  1 cccactagcatcattttcatgaacatgttactggtcgatgaaaaagtttctacatgtttgcactcttagctttaaaattaaactaatgtcatcgttgatt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| ||||||||||||| |||||||||  ||| ||    
T  977534 cccactagcatcattttcatgaacatgttactggtcgatgaaaaggtttctgcatgtttgcactcttaactttaaaattaaagtaatgtcatttttgttt 977435  T
Q  101 tttagttatgtaatttaaccagttgtttactgatgttgttgtcgttaatagggtggacgtattcacgccacagctaaaaaagatttggtggcaaagttca 200  Q
    |||||||||||||||||||||| |||||| || |||||||||||| || ||||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  977434 tttagttatgtaatttaaccagctgtttaatgttgttgttgtcgtcaacagggtggacgtattcacgccacaactagaaaagatttggtggcaaagttca 977335  T
Q  201 ggtccatgggtgaagaagggggtacatatcagcttgaaaatgcaattg 248  Q
    ||||||||| | ||||||||||||||||||||||||||||||||||||    
T  977334 ggtccatggttcaagaagggggtacatatcagcttgaaaatgcaattg 977287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 165; E-Value: 5e-88
Query Start/End: Original strand, 32 - 248
Target Start/End: Original strand, 13904009 - 13904225
Alignment:
Q  32 tggtcgatgaaaaagtttctacatgtttgcactcttagctttaaaattaaactaatgtcatcgttgatttttagttatgtaatttaaccagttgtttact 131  Q
    |||| |||||||| |||||| |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| |||||| |    
T  13904009 tggttgatgaaaaggtttctgcatgtttgcactcttagctttaaaattaaactaatgtcattgttgttttttagttatgtaatttaaccagctgtttaat 13904108  T
Q  132 gatgttgttgtcgttaatagggtggacgtattcacgccacagctaaaaaagatttggtggcaaagttcaggtccatgggtgaagaagggggtacatatca 231  Q
    | |||||||||||| |||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| | |||||||||||||||||||    
T  13904109 gttgttgttgtcgtcaatagggtggacatattcacgccacagctagaaaagatttggtggcaaagttcaggtccatggttcaagaagggggtacatatca 13904208  T
Q  232 gcttgaaaatgcaattg 248  Q
    |||||||||||||||||    
T  13904209 gcttgaaaatgcaattg 13904225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 260 - 387
Target Start/End: Original strand, 25647604 - 25647731
Alignment:
Q  260 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatat 359  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  25647604 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatgt 25647703  T
Q  360 taaagtaacaggaactacgtactagaat 387  Q
    |||||||| |||||||||||||||||||    
T  25647704 taaagtaataggaactacgtactagaat 25647731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 267 - 387
Target Start/End: Original strand, 6123811 - 6123931
Alignment:
Q  267 aggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatattaaagta 366  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  6123811 aggacttttttgtgtactattcattttcttatttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatgttaaagta 6123910  T
Q  367 acaggaactacgtactagaat 387  Q
    |||||||||||||||||||||    
T  6123911 acaggaactacgtactagaat 6123931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 260 - 387
Target Start/End: Original strand, 207838 - 207965
Alignment:
Q  260 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatat 359  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| |    
T  207838 aatgtgtaggacttttttgtgtactgttcattttcttacttattgaaactatttgcatgtcaacgaacttcaatttccctttcaaaattatatgttattt 207937  T
Q  360 taaagtaacaggaactacgtactagaat 387  Q
    ||||||||||||||||||||||||||||    
T  207938 taaagtaacaggaactacgtactagaat 207965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 260 - 387
Target Start/End: Original strand, 1512864 - 1512991
Alignment:
Q  260 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatat 359  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| |    
T  1512864 aatgtgtaggacttttttgtgtactgttcattttcttacttattgaaactatttgcatgtcaacgaacttcaatttccctttcaaaattatatgttattt 1512963  T
Q  360 taaagtaacaggaactacgtactagaat 387  Q
    ||||||||||||||||||||||||||||    
T  1512964 taaagtaacaggaactacgtactagaat 1512991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 260 - 387
Target Start/End: Original strand, 2300909 - 2301036
Alignment:
Q  260 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatat 359  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| | |    
T  2300909 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatatcaacgaacttcagtttcccttttaaaattatatgttttgt 2301008  T
Q  360 taaagtaacaggaactacgtactagaat 387  Q
    |||||||| |||||||||||||||||||    
T  2301009 taaagtaataggaactacgtactagaat 2301036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 260 - 387
Target Start/End: Complemental strand, 5013575 - 5013448
Alignment:
Q  260 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatat 359  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| |    
T  5013575 aatgtgtaggacttttttgtgtactgttcattttcttacttattgaaactatttgcatgtcaacgaacttcaatttccctttcaaaattatatgttattt 5013476  T
Q  360 taaagtaacaggaactacgtactagaat 387  Q
    ||||||||||||||||||||||||||||    
T  5013475 taaagtaacaggaactacgtactagaat 5013448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 264 - 387
Target Start/End: Original strand, 13905424 - 13905546
Alignment:
Q  264 tgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatattaaa 363  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  13905424 tgtaggactttt-tgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatgttaaa 13905522  T
Q  364 gtaacaggaactacgtactagaat 387  Q
    ||||||||||||||||||||||||    
T  13905523 gtaacaggaactacgtactagaat 13905546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 260 - 387
Target Start/End: Original strand, 40605460 - 40605587
Alignment:
Q  260 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatat 359  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| |    
T  40605460 aatgtgtaggacttttttgtgtactgttcattttcttacttattgaaactatttgcatgtcaacgaacttcaatttccctttcaaaattatatgttattt 40605559  T
Q  360 taaagtaacaggaactacgtactagaat 387  Q
    ||||||||||||||||||||||||||||    
T  40605560 taaagtaacaggaactacgtactagaat 40605587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 264 - 375
Target Start/End: Complemental strand, 1916813 - 1916702
Alignment:
Q  264 tgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatattaaa 363  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  1916813 tgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatgttaaa 1916714  T
Q  364 gtaacaggaact 375  Q
    ||||||||||||    
T  1916713 gtaacaggaact 1916702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 260 - 375
Target Start/End: Complemental strand, 27997499 - 27997384
Alignment:
Q  260 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatat 359  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  27997499 aatgtgtagaacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatgt 27997400  T
Q  360 taaagtaacaggaact 375  Q
    ||||||||||||||||    
T  27997399 taaagtaacaggaact 27997384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 260 - 375
Target Start/End: Complemental strand, 28098869 - 28098754
Alignment:
Q  260 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatat 359  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  28098869 aatgtgtagaacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatgt 28098770  T
Q  360 taaagtaacaggaact 375  Q
    ||||||||||||||||    
T  28098769 taaagtaacaggaact 28098754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 260 - 387
Target Start/End: Original strand, 13908352 - 13908479
Alignment:
Q  260 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatat 359  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| |||||||||| |||| |    
T  13908352 aatgtgtaggacttttttgtgtactgttcattttcttacttattgaaactatttgcatgtcaacaaacttcaatttccctttcaaaattatatattattt 13908451  T
Q  360 taaagtaacaggaactacgtactagaat 387  Q
    ||||||||||||||||||||||||||||    
T  13908452 taaagtaacaggaactacgtactagaat 13908479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 260 - 375
Target Start/End: Original strand, 20890771 - 20890886
Alignment:
Q  260 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatat 359  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  20890771 aatgtgtaggacatttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatgt 20890870  T
Q  360 taaagtaacaggaact 375  Q
    ||||||||||| ||||    
T  20890871 taaagtaacagaaact 20890886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 260 - 387
Target Start/End: Original strand, 26455998 - 26456125
Alignment:
Q  260 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatat 359  Q
    ||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| |    
T  26455998 aatgtgtagtacttttttgtgtactgttcattttcttacttattgaaactatttgcatgtcaacgaacttcaatttccctttcaaaattatatgttattt 26456097  T
Q  360 taaagtaacaggaactacgtactagaat 387  Q
    ||||||||||| ||||||||||||||||    
T  26456098 taaagtaacagaaactacgtactagaat 26456125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 260 - 375
Target Start/End: Complemental strand, 36437651 - 36437536
Alignment:
Q  260 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatat 359  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |    
T  36437651 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgtatgtcaacgaacttcagtttcccttttaaaattatatgttatgt 36437552  T
Q  360 taaagtaacaggaact 375  Q
    ||||||||||| ||||    
T  36437551 taaagtaacagaaact 36437536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 260 - 370
Target Start/End: Original strand, 19821995 - 19822105
Alignment:
Q  260 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatat 359  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  19821995 aatgtgtaggacttttttgtgtactattcattttcttactgattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatgt 19822094  T
Q  360 taaagtaacag 370  Q
    |||||||||||    
T  19822095 taaagtaacag 19822105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 260 - 370
Target Start/End: Original strand, 19842216 - 19842326
Alignment:
Q  260 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatat 359  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  19842216 aatgtgtaggacttttttgtgtactattcattttcttactgattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatgt 19842315  T
Q  360 taaagtaacag 370  Q
    |||||||||||    
T  19842316 taaagtaacag 19842326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 260 - 375
Target Start/End: Complemental strand, 35432184 - 35432068
Alignment:
Q  260 aatgtgtaggactttttt-gtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttata 358  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||     
T  35432184 aatgtgtaggactttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaactttagtttcccttttaaaattatatgttatg 35432085  T
Q  359 ttaaagtaacaggaact 375  Q
    |||||||||||||||||    
T  35432084 ttaaagtaacaggaact 35432068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 260 - 375
Target Start/End: Complemental strand, 42109478 - 42109363
Alignment:
Q  260 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatat 359  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  42109478 aatgtgtaggacctttttgtgtactattcattttcttacttattgaaattatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatgt 42109379  T
Q  360 taaagtaacaggaact 375  Q
    ||||||||||| ||||    
T  42109378 taaagtaacagaaact 42109363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 260 - 334
Target Start/End: Original strand, 184224 - 184298
Alignment:
Q  260 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtt 334  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  184224 aatgtgtaggacttttttgggtactattcattttcttacttattgaaagtatttgcatgtcaacgaacttcagtt 184298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 260 - 334
Target Start/End: Original strand, 2449458 - 2449532
Alignment:
Q  260 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtt 334  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  2449458 aatgtgtaggacttttttgggtactattcattttcttacttattgaaagtatttgcatgtcaacgaacttcagtt 2449532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 260 - 334
Target Start/End: Complemental strand, 976092 - 976020
Alignment:
Q  260 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtt 334  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||  ||||||||||||||    
T  976092 aatgtgtaggacttttttgggtactattcattttcttacttattgaaagtatttgcatg--aacgaacttcagtt 976020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 387 - 437
Target Start/End: Original strand, 1273260 - 1273310
Alignment:
Q  387 tattaacttcttaaaatgatatgtgcgttagcacgggtcaatggtctagtt 437  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  1273260 tattaacttcttaaaatgacctgtgcgttagcacgggtcaatggtctagtt 1273310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 342 - 387
Target Start/End: Complemental strand, 21589070 - 21589025
Alignment:
Q  342 taaaattatatgttatattaaagtaacaggaactacgtactagaat 387  Q
    |||||||||||||||| |||||||||||||||||||||||||||||    
T  21589070 taaaattatatgttattttaaagtaacaggaactacgtactagaat 21589025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 384 - 434
Target Start/End: Complemental strand, 1916593 - 1916543
Alignment:
Q  384 gaatattaacttcttaaaatgatatgtgcgttagcacgggtcaatggtcta 434  Q
    ||||||||||||||||||||||   ||||||||||||||||||||||||||    
T  1916593 gaatattaacttcttaaaatgacccgtgcgttagcacgggtcaatggtcta 1916543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 384 - 437
Target Start/End: Original strand, 19822218 - 19822271
Alignment:
Q  384 gaatattaacttcttaaaatgatatgtgcgttagcacgggtcaatggtctagtt 437  Q
    ||||||| ||||||||||||||   |||||||||||||||||||||||||||||    
T  19822218 gaatatttacttcttaaaatgacccgtgcgttagcacgggtcaatggtctagtt 19822271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 384 - 437
Target Start/End: Original strand, 19842439 - 19842492
Alignment:
Q  384 gaatattaacttcttaaaatgatatgtgcgttagcacgggtcaatggtctagtt 437  Q
    ||||||| ||||||||||||||   |||||||||||||||||||||||||||||    
T  19842439 gaatatttacttcttaaaatgacccgtgcgttagcacgggtcaatggtctagtt 19842492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 384 - 436
Target Start/End: Original strand, 26456221 - 26456273
Alignment:
Q  384 gaatattaacttcttaaaatgatatgtgcgttagcacgggtcaatggtctagt 436  Q
    |||||||| ||| || |||||| ||||||||||||||||||||||||||||||    
T  26456221 gaatattatcttttttaaatgacatgtgcgttagcacgggtcaatggtctagt 26456273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 384 - 436
Target Start/End: Original strand, 40605683 - 40605735
Alignment:
Q  384 gaatattaacttcttaaaatgatatgtgcgttagcacgggtcaatggtctagt 436  Q
    |||||||| ||| || |||||| ||||||||||||||||||||||||||||||    
T  40605683 gaatattatcttttttaaatgacatgtgcgttagcacgggtcaatggtctagt 40605735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 384 - 437
Target Start/End: Original strand, 208060 - 208113
Alignment:
Q  384 gaatattaacttcttaaaatgatatgtgcgttagcacgggtcaatggtctagtt 437  Q
    |||||||| ||| || |||||| | |||||||||||||||||||||||||||||    
T  208060 gaatattatcttttttaaatgacacgtgcgttagcacgggtcaatggtctagtt 208113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 384 - 437
Target Start/End: Complemental strand, 21588929 - 21588876
Alignment:
Q  384 gaatattaacttcttaaaatgatatgtgcgttagcacgggtcaatggtctagtt 437  Q
    |||||||| ||| || |||||| | |||||||||||||||||||||||||||||    
T  21588929 gaatattatcttttttaaatgacacgtgcgttagcacgggtcaatggtctagtt 21588876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 384 - 436
Target Start/End: Complemental strand, 27997275 - 27997223
Alignment:
Q  384 gaatattaacttcttaaaatgatatgtgcgttagcacgggtcaatggtctagt 436  Q
    ||||||| ||||||||||||||   ||||||||||| ||||||||||||||||    
T  27997275 gaatatttacttcttaaaatgacccgtgcgttagcatgggtcaatggtctagt 27997223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 384 - 436
Target Start/End: Complemental strand, 28098645 - 28098593
Alignment:
Q  384 gaatattaacttcttaaaatgatatgtgcgttagcacgggtcaatggtctagt 436  Q
    ||||||| ||||||||||||||   ||||||||||| ||||||||||||||||    
T  28098645 gaatatttacttcttaaaatgacccgtgcgttagcatgggtcaatggtctagt 28098593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 387 - 437
Target Start/End: Complemental strand, 975900 - 975850
Alignment:
Q  387 tattaacttcttaaaatgatatgtgcgttagcacgggtcaatggtctagtt 437  Q
    |||||| || || |||||| | |||||||||||||||||||||||||||||    
T  975900 tattaatttttttaaatgacacgtgcgttagcacgggtcaatggtctagtt 975850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 387 - 437
Target Start/End: Original strand, 2449653 - 2449703
Alignment:
Q  387 tattaacttcttaaaatgatatgtgcgttagcacgggtcaatggtctagtt 437  Q
    |||||| || || |||||| | |||||||||||||||||||||||||||||    
T  2449653 tattaatttttttaaatgacacgtgcgttagcacgggtcaatggtctagtt 2449703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 387 - 437
Target Start/End: Original strand, 25647831 - 25647881
Alignment:
Q  387 tattaacttcttaaaatgatatgtgcgttagcacgggtcaatggtctagtt 437  Q
    |||||| || || |||||| | |||||||||||||||||||||||||||||    
T  25647831 tattaatttttttaaatgacacgtgcgttagcacgggtcaatggtctagtt 25647881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 438
Target Start/End: Complemental strand, 36437427 - 36437373
Alignment:
Q  384 gaatattaacttcttaaaatgatatgtgcgttagcacgggtcaatggtctagttg 438  Q
    ||||||| ||||||||||||||   ||||||||||| || |||||||||||||||    
T  36437427 gaatatttacttcttaaaatgacccgtgcgttagcatggatcaatggtctagttg 36437373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 387 - 436
Target Start/End: Original strand, 184419 - 184468
Alignment:
Q  387 tattaacttcttaaaatgatatgtgcgttagcacgggtcaatggtctagt 436  Q
    |||||| || || |||||| | ||||||||||||||||||||||||||||    
T  184419 tattaatttttttaaatgacacgtgcgttagcacgggtcaatggtctagt 184468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 400 - 437
Target Start/End: Original strand, 1513103 - 1513140
Alignment:
Q  400 aaatgatatgtgcgttagcacgggtcaatggtctagtt 437  Q
    |||||| | |||||||||||||||||||||||||||||    
T  1513103 aaatgacacgtgcgttagcacgggtcaatggtctagtt 1513140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 400 - 437
Target Start/End: Original strand, 6124043 - 6124080
Alignment:
Q  400 aaatgatatgtgcgttagcacgggtcaatggtctagtt 437  Q
    |||||| | |||||||||||||||||||||||||||||    
T  6124043 aaatgacacgtgcgttagcacgggtcaatggtctagtt 6124080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 400 - 436
Target Start/End: Complemental strand, 5013337 - 5013301
Alignment:
Q  400 aaatgatatgtgcgttagcacgggtcaatggtctagt 436  Q
    |||||| | ||||||||||||||||||||||||||||    
T  5013337 aaatgacacgtgcgttagcacgggtcaatggtctagt 5013301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 384 - 436
Target Start/End: Original strand, 13908576 - 13908628
Alignment:
Q  384 gaatattaacttcttaaaatgatatgtgcgttagcacgggtcaatggtctagt 436  Q
    |||||||| ||| || |||||| | |||||||||||| |||||||||||||||    
T  13908576 gaatattatcttttttaaatgacacgtgcgttagcacaggtcaatggtctagt 13908628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 384 - 436
Target Start/End: Complemental strand, 35431959 - 35431907
Alignment:
Q  384 gaatattaacttcttaaaatgatatgtgcgttagcacgggtcaatggtctagt 436  Q
    ||||||| | ||||||||||||   |||||||||||| |||||||||||||||    
T  35431959 gaatatttatttcttaaaatgacccgtgcgttagcaccggtcaatggtctagt 35431907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 208; Significance: 1e-113; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 1 - 248
Target Start/End: Complemental strand, 49788805 - 49788558
Alignment:
Q  1 cccactagcatcattttcatgaacatgttactggtcgatgaaaaagtttctacatgtttgcactcttagctttaaaattaaactaatgtcatcgttgatt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| |||| ||    
T  49788805 cccactagcatcattttcatgaacatgttactggtcgatgaaaaggtttctgcatgtttgcactcttagctttaaaattaaactaatgtcattgttgttt 49788706  T
Q  101 tttagttatgtaatttaaccagttgtttactgatgttgttgtcgttaatagggtggacgtattcacgccacagctaaaaaagatttggtggcaaagttca 200  Q
    |||||||||||||||||||||| |||||| ||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  49788705 tttagttatgtaatttaaccagctgtttaatgatgttgttgtcgtcaatagggtggacgtattcacgccacagctagaaaagatttggtggcaaagttca 49788606  T
Q  201 ggtccatgggtgaagaagggggtacatatcagcttgaaaatgcaattg 248  Q
    ||||||||| | ||||||||||||||||||||||||||||||||||||    
T  49788605 ggtccatggttcaagaagggggtacatatcagcttgaaaatgcaattg 49788558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 5 - 248
Target Start/End: Complemental strand, 2048946 - 2048703
Alignment:
Q  5 ctagcatcattttcatgaacatgttactggtcgatgaaaaagtttctacatgtttgcactcttagctttaaaattaaactaatgtcatcgttgattttta 104  Q
    |||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| |||| ||||||    
T  2048946 ctagcatcattttcatgaacatgttactggtcgatgaaaaggtttctgcatgtttgcactcttagctttaaaattaaactaatgtcattgttgtttttta 2048847  T
Q  105 gttatgtaatttaaccagttgtttactgatgttgttgtcgttaatagggtggacgtattcacgccacagctaaaaaagatttggtggcaaagttcaggtc 204  Q
    |||||||||||||||||| |||||| || |||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  2048846 gttatgtaatttaaccagctgtttaatgttgttgttgtcgtcaatagggtggacgtattcacgccacagctagaaaagatttggtggcaaagttcaggtc 2048747  T
Q  205 catgggtgaagaagggggtacatatcagcttgaaaatgcaattg 248  Q
    ||||| | ||||||||||||||||||||||||||||||||||||    
T  2048746 catggttcaagaagggggtacatatcagcttgaaaatgcaattg 2048703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 5 - 248
Target Start/End: Complemental strand, 36868358 - 36868115
Alignment:
Q  5 ctagcatcattttcatgaacatgttactggtcgatgaaaaagtttctacatgtttgcactcttagctttaaaattaaactaatgtcatcgttgattttta 104  Q
    |||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| |||| ||||||    
T  36868358 ctagcatcattttcatgaacatgttactggtcgatgaaaaggtttctgcatgtttgcactcttagctttaaaattaaactaatgtcattgttgtttttta 36868259  T
Q  105 gttatgtaatttaaccagttgtttactgatgttgttgtcgttaatagggtggacgtattcacgccacagctaaaaaagatttggtggcaaagttcaggtc 204  Q
    |||||||||||||||||| |||||| || |||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  36868258 gttatgtaatttaaccagctgtttaatgttgttgttgtcgtcaatagggtggacgtattcacgccacagctagaaaagatttggtggcaaagttcaggtc 36868159  T
Q  205 catgggtgaagaagggggtacatatcagcttgaaaatgcaattg 248  Q
    ||||| | ||||||||||||||||||||||||||||||||||||    
T  36868158 catggttcaagaagggggtacatatcagcttgaaaatgcaattg 36868115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 1 - 248
Target Start/End: Original strand, 7479161 - 7479408
Alignment:
Q  1 cccactagcatcattttcatgaacatgttactggtcgatgaaaaagtttctacatgtttgcactcttagctttaaaattaaactaatgtcatcgttgatt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| ||||||||||||| |||||||||  ||| ||    
T  7479161 cccactagcatcattttcatgaacatgttactggtcgatgaaaaggtttctgcatgtttgcactcttaactttaaaattaaagtaatgtcatttttgttt 7479260  T
Q  101 tttagttatgtaatttaaccagttgtttactgatgttgttgtcgttaatagggtggacgtattcacgccacagctaaaaaagatttggtggcaaagttca 200  Q
    |||||||||||||||||||||| |||||| || |||||||||||| || ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  7479261 tttagttatgtaatttaaccagctgtttaatgttgttgttgtcgtcaacagggtggacgtattcacgccacagctagaaaagatttggtggcaaagttca 7479360  T
Q  201 ggtccatgggtgaagaagggggtacatatcagcttgaaaatgcaattg 248  Q
    ||||||||| | ||||||||||||||||||||||||||||||||||||    
T  7479361 ggtccatggttcaagaagggggtacatatcagcttgaaaatgcaattg 7479408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 1 - 234
Target Start/End: Complemental strand, 45504106 - 45503873
Alignment:
Q  1 cccactagcatcattttcatgaacatgttactggtcgatgaaaaagtttctacatgtttgcactcttagctttaaaattaaactaatgtcatcgttgatt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||  ||| |  |||||||||||||||||||||||||||||||||||||||||||| ||    
T  45504106 cccactagcatcattttcatgaacatgttactggtcgatgaaaagatttatgtatgtttgcactcttagctttaaaattaaactaatgtcatcgttgttt 45504007  T
Q  101 tttagttatgtaatttaaccagttgtttactgatgttgttgtcgttaatagggtggacgtattcacgccacagctaaaaaagatttggtggcaaagttca 200  Q
    |||||||||||||||||||||| |||||| || ||||||| |||| ||||||| |||||||||||||||||||||| |||||||||||||||||| ||||    
T  45504006 tttagttatgtaatttaaccagctgtttaatgttgttgttttcgtcaataggggggacgtattcacgccacagctagaaaagatttggtggcaaaattca 45503907  T
Q  201 ggtccatgggtgaagaagggggtacatatcagct 234  Q
    ||||||||| ||||||||||||||||||||||||    
T  45503906 ggtccatggttgaagaagggggtacatatcagct 45503873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 260 - 387
Target Start/End: Complemental strand, 2047508 - 2047381
Alignment:
Q  260 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatat 359  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  2047508 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatgt 2047409  T
Q  360 taaagtaacaggaactacgtactagaat 387  Q
    ||||||||||||||||||||||||||||    
T  2047408 taaagtaacaggaactacgtactagaat 2047381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 260 - 387
Target Start/End: Complemental strand, 36866919 - 36866792
Alignment:
Q  260 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatat 359  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  36866919 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatgt 36866820  T
Q  360 taaagtaacaggaactacgtactagaat 387  Q
    ||||||||||||||||||||||||||||    
T  36866819 taaagtaacaggaactacgtactagaat 36866792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 260 - 387
Target Start/End: Complemental strand, 2045257 - 2045130
Alignment:
Q  260 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatat 359  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| |    
T  2045257 aatgtgtaggacttttttgtgtactgttcattttcttacttattgaaactatttgcatgtcaacgaacttcaatttccctttcaaaattatatgttattt 2045158  T
Q  360 taaagtaacaggaactacgtactagaat 387  Q
    ||||||||||||||||||||||||||||    
T  2045157 taaagtaacaggaactacgtactagaat 2045130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 260 - 387
Target Start/End: Complemental strand, 45503541 - 45503414
Alignment:
Q  260 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatat 359  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| |    
T  45503541 aatgtgtaggacttttttgtgtactgttcattttcttacttattgaaactatttgcatgtcaacgaacttcaatttccctttcaaaattatatgttattt 45503442  T
Q  360 taaagtaacaggaactacgtactagaat 387  Q
    ||||||||||||||||||||||||||||    
T  45503441 taaagtaacaggaactacgtactagaat 45503414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 260 - 387
Target Start/End: Original strand, 50708966 - 50709093
Alignment:
Q  260 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatat 359  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| |    
T  50708966 aatgtgtaggacttttttgtgtactattcattttcttactttttgaaactatttgcatgtcaacgaacttcaatttccctttcaaaattatatgttattt 50709065  T
Q  360 taaagtaacaggaactacgtactagaat 387  Q
    ||||||||||||||||||||||||||||    
T  50709066 taaagtaacaggaactacgtactagaat 50709093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 260 - 387
Target Start/End: Original strand, 29245545 - 29245672
Alignment:
Q  260 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatat 359  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  29245545 aatgtgtaggacttttttgtgtactattcattttcttacttattaaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatgt 29245644  T
Q  360 taaagtaacaggaactacgtactagaat 387  Q
    |||| ||||||||||||  |||||||||    
T  29245645 taaaataacaggaactaaatactagaat 29245672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 260 - 375
Target Start/End: Complemental strand, 38211002 - 38210887
Alignment:
Q  260 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatat 359  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  38211002 aatgtgtaggacttttttgtgtactgttcattttcttacttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatgt 38210903  T
Q  360 taaagtaacaggaact 375  Q
    ||||||||||||||||    
T  38210902 taaagtaacaggaact 38210887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 260 - 387
Target Start/End: Complemental strand, 49787365 - 49787240
Alignment:
Q  260 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatat 359  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| |    
T  49787365 aatgtgtaggacttttttgtgtactcttcattttcttacatattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaat--tatgttatgt 49787268  T
Q  360 taaagtaacaggaactacgtactagaat 387  Q
    ||||||||||||||||||||||||||||    
T  49787267 taaagtaacaggaactacgtactagaat 49787240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 260 - 387
Target Start/End: Complemental strand, 13926310 - 13926183
Alignment:
Q  260 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatat 359  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| |    
T  13926310 aatgtgtaggacttttttgtgtactattcattttcttatttattgaaactatttgcatgtcaacgaacttcaatttccctttcaaaattatatgttattt 13926211  T
Q  360 taaagtaacaggaactacgtactagaat 387  Q
     |||||||||||||||||||| ||||||    
T  13926210 aaaagtaacaggaactacgtaatagaat 13926183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 260 - 387
Target Start/End: Original strand, 26211745 - 26211871
Alignment:
Q  260 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatat 359  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| |    
T  26211745 aatgtataggacttttttgtgtaccattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtttccc-tttaaaatgatatgttatgt 26211843  T
Q  360 taaagtaacaggaactacgtactagaat 387  Q
    ||||||||||||||||||||||||||||    
T  26211844 taaagtaacaggaactacgtactagaat 26211871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 260 - 375
Target Start/End: Complemental strand, 45501296 - 45501181
Alignment:
Q  260 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatat 359  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |    
T  45501296 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagttttccttttaaaattatatgttatgt 45501197  T
Q  360 taaagtaacaggaact 375  Q
    ||| ||||||||||||    
T  45501196 taatgtaacaggaact 45501181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 260 - 387
Target Start/End: Original strand, 48651109 - 48651235
Alignment:
Q  260 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatat 359  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| |    
T  48651109 aatgtgtaggactttt-tgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcaatttccctttcaaaattatatgttattt 48651207  T
Q  360 taaagtaacaggaactacgtactagaat 387  Q
    |||||||||||||||||| |||||||||    
T  48651208 taaagtaacaggaactacatactagaat 48651235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 260 - 370
Target Start/End: Original strand, 48960817 - 48960927
Alignment:
Q  260 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatat 359  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  48960817 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaattatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatgt 48960916  T
Q  360 taaagtaacag 370  Q
    |||||||||||    
T  48960917 taaagtaacag 48960927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 260 - 369
Target Start/End: Original strand, 15691563 - 15691672
Alignment:
Q  260 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatat 359  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  15691563 aatgtgtatgacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatgt 15691662  T
Q  360 taaagtaaca 369  Q
    ||||||||||    
T  15691663 taaagtaaca 15691672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 260 - 375
Target Start/End: Complemental strand, 39513264 - 39513149
Alignment:
Q  260 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatat 359  Q
    ||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |    
T  39513264 aatgtgtaggacttttttgtgtactgttcattttcttatttattgaaactatttgcatgtcaacgaacttcagttttccttttaaaattatatgttatgt 39513165  T
Q  360 taaagtaacaggaact 375  Q
    ||||||||||||||||    
T  39513164 taaagtaacaggaact 39513149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 260 - 334
Target Start/End: Original strand, 7480603 - 7480677
Alignment:
Q  260 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtt 334  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  7480603 aatgtgtaggacttttttgggtactattcattttcttacttattgaaagtatttgcatgtcaacgaacttcagtt 7480677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 260 - 334
Target Start/End: Original strand, 9533979 - 9534053
Alignment:
Q  260 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtt 334  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  9533979 aatgtgtaggacttttttgggtactattcattttcttacttattgaaagtatttgcatgtcaacgaacttcagtt 9534053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 260 - 334
Target Start/End: Original strand, 42496687 - 42496761
Alignment:
Q  260 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtt 334  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  42496687 aatgtgtaggacttttttgggtactattcattttcttacttattgaaagtatttgcatgtcaacgaacttcagtt 42496761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 148 - 246
Target Start/End: Complemental strand, 37901625 - 37901527
Alignment:
Q  148 atagggtggacgtattcacgccacagctaaaaaagatttggtggcaaagttcaggtccatgggtgaagaagggggtacatatcagcttgaaaatgcaat 246  Q
    ||||||||||||||| |||||||||| || ||| |||||||||||||  |||||||| |||| ||| ||||||| ||||||| ||||| | ||||||||    
T  37901625 atagggtggacgtatccacgccacagttagaaaggatttggtggcaagattcaggtcaatggttgaggaaggggctacatatgagcttcacaatgcaat 37901527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 384 - 446
Target Start/End: Complemental strand, 2045034 - 2044972
Alignment:
Q  384 gaatattaacttcttaaaatgatatgtgcgttagcacgggtcaatggtctagttggctttaaa 446  Q
    |||||||| ||| || |||||| |||||||||||||||||||||||||||||||  |||||||    
T  2045034 gaatattatcttttttaaatgacatgtgcgttagcacgggtcaatggtctagttcactttaaa 2044972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 384 - 436
Target Start/End: Complemental strand, 38210778 - 38210726
Alignment:
Q  384 gaatattaacttcttaaaatgatatgtgcgttagcacgggtcaatggtctagt 436  Q
    ||||||| ||||||||||||||   ||||||||||||||||||||||||||||    
T  38210778 gaatatttacttcttaaaatgacccgtgcgttagcacgggtcaatggtctagt 38210726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 384 - 437
Target Start/End: Complemental strand, 45501072 - 45501019
Alignment:
Q  384 gaatattaacttcttaaaatgatatgtgcgttagcacgggtcaatggtctagtt 437  Q
    ||||||| ||||||||||||||   ||||||||||||||||| |||||||||||    
T  45501072 gaatatttacttcttaaaatgacccgtgcgttagcacgggtccatggtctagtt 45501019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 384 - 437
Target Start/End: Original strand, 48961039 - 48961092
Alignment:
Q  384 gaatattaacttcttaaaatgatatgtgcgttagcacgggtcaatggtctagtt 437  Q
    ||||||| ||||||||||||||   ||||||||||| |||||||||||||||||    
T  48961039 gaatatttacttcttaaaatgacccgtgcgttagcaggggtcaatggtctagtt 48961092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 384 - 436
Target Start/End: Original strand, 15691786 - 15691838
Alignment:
Q  384 gaatattaacttcttaaaatgatatgtgcgttagcacgggtcaatggtctagt 436  Q
    ||||||| ||||||||||||||   ||||||||||| ||||||||||||||||    
T  15691786 gaatatttacttcttaaaatgacccgtgcgttagcatgggtcaatggtctagt 15691838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 384 - 436
Target Start/End: Original strand, 36461727 - 36461779
Alignment:
Q  384 gaatattaacttcttaaaatgatatgtgcgttagcacgggtcaatggtctagt 436  Q
    ||||||| ||||||||||||||   ||||||||||| ||||||||||||||||    
T  36461727 gaatatttacttcttaaaatgacccgtgcgttagcatgggtcaatggtctagt 36461779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 384 - 436
Target Start/End: Original strand, 48651330 - 48651382
Alignment:
Q  384 gaatattaacttcttaaaatgatatgtgcgttagcacgggtcaatggtctagt 436  Q
    |||||||| ||| || |||||| | ||||||||||||||||||||||||||||    
T  48651330 gaatattatcttttttaaatgacacgtgcgttagcacgggtcaatggtctagt 48651382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 384 - 436
Target Start/End: Original strand, 50709189 - 50709241
Alignment:
Q  384 gaatattaacttcttaaaatgatatgtgcgttagcacgggtcaatggtctagt 436  Q
    |||||||| ||| || |||||| | ||||||||||||||||||||||||||||    
T  50709189 gaatattatcttttttaaatgacacgtgcgttagcacgggtcaatggtctagt 50709241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 387 - 437
Target Start/End: Original strand, 9534174 - 9534224
Alignment:
Q  387 tattaacttcttaaaatgatatgtgcgttagcacgggtcaatggtctagtt 437  Q
    |||||| || || |||||| | |||||||||||||||||||||||||||||    
T  9534174 tattaatttttttaaatgacacgtgcgttagcacgggtcaatggtctagtt 9534224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 387 - 437
Target Start/End: Original strand, 42496882 - 42496932
Alignment:
Q  387 tattaacttcttaaaatgatatgtgcgttagcacgggtcaatggtctagtt 437  Q
    |||||| || || |||||| | |||||||||||||||||||||||||||||    
T  42496882 tattaatttttttaaatgacacgtgcgttagcacgggtcaatggtctagtt 42496932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 400 - 437
Target Start/End: Complemental strand, 2047269 - 2047232
Alignment:
Q  400 aaatgatatgtgcgttagcacgggtcaatggtctagtt 437  Q
    |||||| | |||||||||||||||||||||||||||||    
T  2047269 aaatgacacgtgcgttagcacgggtcaatggtctagtt 2047232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 387 - 436
Target Start/End: Original strand, 7480798 - 7480847
Alignment:
Q  387 tattaacttcttaaaatgatatgtgcgttagcacgggtcaatggtctagt 436  Q
    |||||| || || |||||| | ||||||||||||||||||||||||||||    
T  7480798 tattaatttttttaaatgacacgtgcgttagcacgggtcaatggtctagt 7480847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 408 - 437
Target Start/End: Original strand, 8998869 - 8998898
Alignment:
Q  408 tgtgcgttagcacgggtcaatggtctagtt 437  Q
    ||||||||||||||||||||||||||||||    
T  8998869 tgtgcgttagcacgggtcaatggtctagtt 8998898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 400 - 437
Target Start/End: Complemental strand, 49787128 - 49787091
Alignment:
Q  400 aaatgatatgtgcgttagcacgggtcaatggtctagtt 437  Q
    |||||| | |||||||||||||||||||||||||||||    
T  49787128 aaatgacacgtgcgttagcacgggtcaatggtctagtt 49787091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 400 - 436
Target Start/End: Complemental strand, 36866680 - 36866644
Alignment:
Q  400 aaatgatatgtgcgttagcacgggtcaatggtctagt 436  Q
    |||||| | ||||||||||||||||||||||||||||    
T  36866680 aaatgacacgtgcgttagcacgggtcaatggtctagt 36866644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 408 - 436
Target Start/End: Complemental strand, 37891263 - 37891235
Alignment:
Q  408 tgtgcgttagcacgggtcaatggtctagt 436  Q
    |||||||||||||||||||||||||||||    
T  37891263 tgtgcgttagcacgggtcaatggtctagt 37891235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 200; Significance: 1e-109; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 1 - 248
Target Start/End: Original strand, 17695563 - 17695810
Alignment:
Q  1 cccactagcatcattttcatgaacatgttactggtcgatgaaaaagtttctacatgtttgcactcttagctttaaaattaaactaatgtcatcgttgatt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| |||| ||    
T  17695563 cccactagcatcattttcatgaacatgttactggtcgatgaaaaggtttctgcatgtttgcactcttagctttaaaattaaactaatgtcattgttgttt 17695662  T
Q  101 tttagttatgtaatttaaccagttgtttactgatgttgttgtcgttaatagggtggacgtattcacgccacagctaaaaaagatttggtggcaaagttca 200  Q
    |||||||||||||||||||||| |||||| || |||||||||||| || ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  17695663 tttagttatgtaatttaaccagctgtttaatgttgttgttgtcgtcaacagggtggacgtattcacgccacagctagaaaagatttggtggcaaagttca 17695762  T
Q  201 ggtccatgggtgaagaagggggtacatatcagcttgaaaatgcaattg 248  Q
    ||||||||| | ||||||||||||||||||||||||||||||||||||    
T  17695763 ggtccatggttcaagaagggggtacatatcagcttgaaaatgcaattg 17695810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 198; E-Value: 1e-107
Query Start/End: Original strand, 1 - 234
Target Start/End: Original strand, 32659752 - 32659985
Alignment:
Q  1 cccactagcatcattttcatgaacatgttactggtcgatgaaaaagtttctacatgtttgcactcttagctttaaaattaaactaatgtcatcgttgatt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  32659752 cccactagcatcattttcatgaacatgttactggtcgatgaaaaggtttctacatgtttgcactcttagctttaaaattaaactaatgtcatcgttgttt 32659851  T
Q  101 tttagttatgtaatttaaccagttgtttactgatgttgttgtcgttaatagggtggacgtattcacgccacagctaaaaaagatttggtggcaaagttca 200  Q
    |||||||||||||||||||||| |||||| || ||||||| |||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  32659852 tttagttatgtaatttaaccagctgtttaatgttgttgttttcgtcaatagggtggacgtattcacgccacagctagaaaagatttggtggcaaagttca 32659951  T
Q  201 ggtccatgggtgaagaagggggtacatatcagct 234  Q
    ||||||||| ||||||||||||||||||||||||    
T  32659952 ggtccatggttgaagaagggggtacatatcagct 32659985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 1 - 248
Target Start/End: Original strand, 27714593 - 27714840
Alignment:
Q  1 cccactagcatcattttcatgaacatgttactggtcgatgaaaaagtttctacatgtttgcactcttagctttaaaattaaactaatgtcatcgttgatt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| ||||||||||||||||||||||||||||||| |||| ||    
T  27714593 cccactagcatcattttcatgaacatgttactggtcgatgaaaaggtttctgcatgtttgaactcttagctttaaaattaaactaatgtcattgttgttt 27714692  T
Q  101 tttagttatgtaatttaaccagttgtttactgatgttgttgtcgttaatagggtggacgtattcacgccacagctaaaaaagatttggtggcaaagttca 200  Q
    |||||||||||||||||||||| |||||| || |||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  27714693 tttagttatgtaatttaaccagctgtttaatgttgttgttgtcgtcaatagggtggacgtattcacgccacagctagaaaagatttggtggcaaagttca 27714792  T
Q  201 ggtccatgggtgaagaagggggtacatatcagcttgaaaatgcaattg 248  Q
    ||| ||||| | ||||||||||||||||||||||||||||||||||||    
T  27714793 ggtgcatggttcaagaagggggtacatatcagcttgaaaatgcaattg 27714840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 1 - 248
Target Start/End: Original strand, 7887515 - 7887762
Alignment:
Q  1 cccactagcatcattttcatgaacatgttactggtcgatgaaaaagtttctacatgtttgcactcttagctttaaaattaaactaatgtcatcgttgatt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| ||||||||||||| |||||||||  ||| ||    
T  7887515 cccactagcatcattttcatgaacatgttactggtcgatgaaaaggtttctgcatgtttgcactcttaactttaaaattaaagtaatgtcatttttgttt 7887614  T
Q  101 tttagttatgtaatttaaccagttgtttactgatgttgttgtcgttaatagggtggacgtattcacgccacagctaaaaaagatttggtggcaaagttca 200  Q
    |||||||||||||||||||||| |||||| || |||||||||||| || ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  7887615 tttagttatgtaatttaaccagctgtttaatgttgttgttgtcgtcaacagggtggacgtattcacgccacagctagaaaagatttggtggcaaagttca 7887714  T
Q  201 ggtccatgggtgaagaagggggtacatatcagcttgaaaatgcaattg 248  Q
    ||||||||| | ||||||||||||||||||||||||||||||||||||    
T  7887715 ggtccatggttcaagaagggggtacatatcagcttgaaaatgcaattg 7887762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 260 - 387
Target Start/End: Complemental strand, 20955767 - 20955640
Alignment:
Q  260 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatat 359  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| |    
T  20955767 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcaatttccctttcaaaattatatgttattt 20955668  T
Q  360 taaagtaacaggaactacgtactagaat 387  Q
    ||||||||||||||||||||||||||||    
T  20955667 taaagtaacaggaactacgtactagaat 20955640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 260 - 387
Target Start/End: Original strand, 31100228 - 31100355
Alignment:
Q  260 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatat 359  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  31100228 aatgtgtaggacttttttgtatactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatgt 31100327  T
Q  360 taaagtaacaggaactacgtactagaat 387  Q
    |||||||| |||||||||||||||||||    
T  31100328 taaagtaataggaactacgtactagaat 31100355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 260 - 387
Target Start/End: Original strand, 7893847 - 7893974
Alignment:
Q  260 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatat 359  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| |    
T  7893847 aatgtgtaggacttttttgtgtactgttcattttcttacttattgaaactatttgcatgtcaacgaacttcaatttccctttcaaaattatatgttattt 7893946  T
Q  360 taaagtaacaggaactacgtactagaat 387  Q
    ||||||||||||||||||||||||||||    
T  7893947 taaagtaacaggaactacgtactagaat 7893974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 260 - 387
Target Start/End: Original strand, 17697005 - 17697132
Alignment:
Q  260 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatat 359  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| |    
T  17697005 aatgtgtaggacttttttgtgtactattcattttcttatttattgaaactatttacatgtcaatgaacttcagtttcccttttaaaattatatgttatgt 17697104  T
Q  360 taaagtaacaggaactacgtactagaat 387  Q
    ||||||||||||||||||||||||||||    
T  17697105 taaagtaacaggaactacgtactagaat 17697132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 260 - 387
Target Start/End: Original strand, 26168934 - 26169061
Alignment:
Q  260 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatat 359  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| |    
T  26168934 aatgtgtaggacttttttgtgtactgttcattttcttacttattgaaactatttgcatgtcaacgaacttcaatttccctttcaaaattatatgttattt 26169033  T
Q  360 taaagtaacaggaactacgtactagaat 387  Q
    ||||||||||||||||||||||||||||    
T  26169034 taaagtaacaggaactacgtactagaat 26169061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 260 - 387
Target Start/End: Original strand, 27716034 - 27716160
Alignment:
Q  260 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatat 359  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |    
T  27716034 aatgtgtaggactttt-tgtgtactattcattttcttacttattgaaacgatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatgt 27716132  T
Q  360 taaagtaacaggaactacgtactagaat 387  Q
    ||||||||||||||||||||||||||||    
T  27716133 taaagtaacaggaactacgtactagaat 27716160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 260 - 387
Target Start/End: Original strand, 29956567 - 29956694
Alignment:
Q  260 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatat 359  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |    
T  29956567 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattataagttatgt 29956666  T
Q  360 taaagtaacaggaactacgtactagaat 387  Q
    |||||||||||||| ||||  |||||||    
T  29956667 taaagtaacaggaagtacgatctagaat 29956694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 260 - 387
Target Start/End: Original strand, 45115920 - 45116047
Alignment:
Q  260 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatat 359  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| |    
T  45115920 aatgtgtatgacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcaatttccctttcaaaattatatgttattt 45116019  T
Q  360 taaagtaacaggaactacgtactagaat 387  Q
    |||||||| |||||||||||||||||||    
T  45116020 taaagtaataggaactacgtactagaat 45116047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 267 - 387
Target Start/End: Original strand, 16719998 - 16720118
Alignment:
Q  267 aggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatattaaagta 366  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  16719998 aggacttttttgtgtactattcattttcttatttattgaaactatttacatgtcaatgaacttcagtttcccttttaaaattatatgttatgttaaagta 16720097  T
Q  367 acaggaactacgtactagaat 387  Q
    |||||||||||||||||||||    
T  16720098 acaggaactacgtactagaat 16720118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 260 - 387
Target Start/End: Original strand, 22007070 - 22007197
Alignment:
Q  260 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatat 359  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| |||| |    
T  22007070 aatgtgtaggacttttttgtgtactgttcattttcttacttattgaaactatttgcatgtcaacgaacttcaatttccctttcaaaattatatattattt 22007169  T
Q  360 taaagtaacaggaactacgtactagaat 387  Q
    |||||||||||||||||||||| |||||    
T  22007170 taaagtaacaggaactacgtaccagaat 22007197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 260 - 387
Target Start/End: Original strand, 32660314 - 32660441
Alignment:
Q  260 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatat 359  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| |    
T  32660314 aatgtgtaggacttttttgtgtactgttcattttcttacttattgaaactatttgcatgtcaacgaacttcaatttccctttcaaaattatatgttattt 32660413  T
Q  360 taaagtaacaggaactacgtactagaat 387  Q
    || ||||||||||||||||| |||||||    
T  32660414 tatagtaacaggaactacgtgctagaat 32660441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 260 - 387
Target Start/End: Original strand, 32038533 - 32038660
Alignment:
Q  260 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatat 359  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| |||||| || ||||||||||||||| |    
T  32038533 aatgtgtaggacttttttgtgtactgttcattttcttacttattgaaagtatttgcatgtcaacgaacttcaatttccccttcaaaattatatgttattt 32038632  T
Q  360 taaagtaacaggaactacgtactagaat 387  Q
    |||||||| |||||||||||||||||||    
T  32038633 taaagtaataggaactacgtactagaat 32038660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 260 - 370
Target Start/End: Complemental strand, 13398422 - 13398312
Alignment:
Q  260 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatat 359  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| |    
T  13398422 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgtatgtcaacgaactttagtttcccttttaaaattatatgttatgt 13398323  T
Q  360 taaagtaacag 370  Q
    |||||||||||    
T  13398322 taaagtaacag 13398312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 260 - 375
Target Start/End: Original strand, 46909438 - 46909552
Alignment:
Q  260 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatat 359  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |    
T  46909438 aatgtgtagga-ttttttgtgtcctattcattttcttacttattgaaactatttacatgtcaacgaacttcagtttcccttttaaaattatatgttatgt 46909536  T
Q  360 taaagtaacaggaact 375  Q
    ||||||||||||||||    
T  46909537 taaagtaacaggaact 46909552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 260 - 370
Target Start/End: Original strand, 5093660 - 5093770
Alignment:
Q  260 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatat 359  Q
    |||||||| ||||||||| |||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |    
T  5093660 aatgtgtatgacttttttttgtattattcattttcttacttattgaaactatttgcatgtcaacgtacttcagtttcccttttaaaattatatgttatgt 5093759  T
Q  360 taaagtaacag 370  Q
    |||| ||||||    
T  5093760 taaaataacag 5093770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 260 - 334
Target Start/End: Original strand, 7888957 - 7889031
Alignment:
Q  260 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtt 334  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  7888957 aatgtgtaggacttttttgggtactattcattttcttacttattgaaagtatttgcatgtcaacgaacttcagtt 7889031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 384 - 436
Target Start/End: Original strand, 31100452 - 31100504
Alignment:
Q  384 gaatattaacttcttaaaatgatatgtgcgttagcacgggtcaatggtctagt 436  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  31100452 gaatattaacttcttaaaatgacctgtgcgttagcacgggtcaatggtctagt 31100504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 384 - 437
Target Start/End: Original strand, 29956791 - 29956844
Alignment:
Q  384 gaatattaacttcttaaaatgatatgtgcgttagcacgggtcaatggtctagtt 437  Q
    ||||||||||||||||||||||   |||||||||||||||||||||||||||||    
T  29956791 gaatattaacttcttaaaatgacccgtgcgttagcacgggtcaatggtctagtt 29956844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 384 - 436
Target Start/End: Original strand, 7894070 - 7894122
Alignment:
Q  384 gaatattaacttcttaaaatgatatgtgcgttagcacgggtcaatggtctagt 436  Q
    |||||||| ||| || |||||| ||||||||||||||||||||||||||||||    
T  7894070 gaatattatcttttttaaatgacatgtgcgttagcacgggtcaatggtctagt 7894122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 387 - 436
Target Start/End: Original strand, 7889152 - 7889201
Alignment:
Q  387 tattaacttcttaaaatgatatgtgcgttagcacgggtcaatggtctagt 436  Q
    |||||| || ||||||||| | ||||||||||||||||||||||||||||    
T  7889152 tattaattttttaaaatgacacgtgcgttagcacgggtcaatggtctagt 7889201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 400 - 437
Target Start/End: Original strand, 16720230 - 16720267
Alignment:
Q  400 aaatgatatgtgcgttagcacgggtcaatggtctagtt 437  Q
    |||||| |||||||||||||||||||||||||||||||    
T  16720230 aaatgacatgtgcgttagcacgggtcaatggtctagtt 16720267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 400 - 437
Target Start/End: Original strand, 17697244 - 17697281
Alignment:
Q  400 aaatgatatgtgcgttagcacgggtcaatggtctagtt 437  Q
    |||||| |||||||||||||||||||||||||||||||    
T  17697244 aaatgacatgtgcgttagcacgggtcaatggtctagtt 17697281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 384 - 437
Target Start/End: Original strand, 22007294 - 22007347
Alignment:
Q  384 gaatattaacttcttaaaatgatatgtgcgttagcacgggtcaatggtctagtt 437  Q
    |||||||| ||| || |||||| | |||||||||||||||||||||||||||||    
T  22007294 gaatattatcttttttaaatgacacgtgcgttagcacgggtcaatggtctagtt 22007347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 384 - 437
Target Start/End: Original strand, 32660536 - 32660589
Alignment:
Q  384 gaatattaacttcttaaaatgatatgtgcgttagcacgggtcaatggtctagtt 437  Q
    |||||||| ||| || |||||| | |||||||||||||||||||||||||||||    
T  32660536 gaatattatcttttttaaatgacacgtgcgttagcacgggtcaatggtctagtt 32660589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 384 - 437
Target Start/End: Original strand, 46909661 - 46909714
Alignment:
Q  384 gaatattaacttcttaaaatgatatgtgcgttagcacgggtcaatggtctagtt 437  Q
    ||||||| ||||||||||||||   |||| ||||||||||||||||||||||||    
T  46909661 gaatatttacttcttaaaatgacgcgtgcattagcacgggtcaatggtctagtt 46909714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 384 - 436
Target Start/End: Complemental strand, 13398198 - 13398146
Alignment:
Q  384 gaatattaacttcttaaaatgatatgtgcgttagcacgggtcaatggtctagt 436  Q
    ||||||| ||||||||||||||   ||||||||||| ||||||||||||||||    
T  13398198 gaatatttacttcttaaaatgactcgtgcgttagcatgggtcaatggtctagt 13398146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 384 - 436
Target Start/End: Original strand, 32038757 - 32038809
Alignment:
Q  384 gaatattaacttcttaaaatgatatgtgcgttagcacgggtcaatggtctagt 436  Q
    |||||||| ||| || |||||| | ||||||||||||||||||||||||||||    
T  32038757 gaatattatcttttttaaatgacacgtgcgttagcacgggtcaatggtctagt 32038809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 438
Target Start/End: Complemental strand, 20955544 - 20955490
Alignment:
Q  384 gaatattaacttcttaaaatgatatgtgcgttagcacgggtcaatggtctagttg 438  Q
    |||||||| ||| || |||||| | ||||||||||||||| ||||||||||||||    
T  20955544 gaatattatcttttttaaatgacacgtgcgttagcacgggacaatggtctagttg 20955490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 384 - 437
Target Start/End: Original strand, 5093884 - 5093937
Alignment:
Q  384 gaatattaacttcttaaaatgatatgtgcgttagcacgggtcaatggtctagtt 437  Q
    ||||||| ||||||||||||||   ||||||||||| |||||| ||||||||||    
T  5093884 gaatatttacttcttaaaatgacccgtgcgttagcatgggtcagtggtctagtt 5093937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 400 - 437
Target Start/End: Original strand, 27716271 - 27716308
Alignment:
Q  400 aaatgatatgtgcgttagcacgggtcaatggtctagtt 437  Q
    |||||| | |||||||||||||||||||||||||||||    
T  27716271 aaatgacacgtgcgttagcacgggtcaatggtctagtt 27716308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 387 - 436
Target Start/End: Original strand, 45116146 - 45116195
Alignment:
Q  387 tattaacttcttaaaatgatatgtgcgttagcacgggtcaatggtctagt 436  Q
    ||||| ||| || |||||| | ||||||||||||||||||||||||||||    
T  45116146 tattatcttttttaaatgacacgtgcgttagcacgggtcaatggtctagt 45116195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 200; Significance: 1e-109; HSPs: 28)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 1 - 248
Target Start/End: Complemental strand, 21583068 - 21582821
Alignment:
Q  1 cccactagcatcattttcatgaacatgttactggtcgatgaaaaagtttctacatgtttgcactcttagctttaaaattaaactaatgtcatcgttgatt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| |||| ||    
T  21583068 cccactagcatcattttcatgaacatgttactggtcgatgaaaaggtttctgcatgtttgcactcttagctttaaaattaaactaatgtcattgttgttt 21582969  T
Q  101 tttagttatgtaatttaaccagttgtttactgatgttgttgtcgttaatagggtggacgtattcacgccacagctaaaaaagatttggtggcaaagttca 200  Q
    |||||||||||||||||||||| |||||| || |||||||||||| || ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  21582968 tttagttatgtaatttaaccagctgtttaatgttgttgttgtcgtcaacagggtggacgtattcacgccacagctagaaaagatttggtggcaaagttca 21582869  T
Q  201 ggtccatgggtgaagaagggggtacatatcagcttgaaaatgcaattg 248  Q
    ||||||||| | ||||||||||||||||||||||||||||||||||||    
T  21582868 ggtccatggttcaagaagggggtacatatcagcttgaaaatgcaattg 21582821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 1 - 234
Target Start/End: Complemental strand, 30388603 - 30388370
Alignment:
Q  1 cccactagcatcattttcatgaacatgttactggtcgatgaaaaagtttctacatgtttgcactcttagctttaaaattaaactaatgtcatcgttgatt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  30388603 cccactagcatcattttcatgaacatgttactggtcgatgaaaaggtttctacatgtttgcactcttagctttaaaattaaactaatgtcatcgttgttt 30388504  T
Q  101 tttagttatgtaatttaaccagttgtttactgatgttgttgtcgttaatagggtggacgtattcacgccacagctaaaaaagatttggtggcaaagttca 200  Q
    |||||||||||||||||||||| |||||| || ||||||| |||| |||||||||||||||||||||||||||||| |||||||||| ||||||||||||    
T  30388503 tttagttatgtaatttaaccagctgtttaatgttgttgttttcgtcaatagggtggacgtattcacgccacagctagaaaagatttgatggcaaagttca 30388404  T
Q  201 ggtccatgggtgaagaagggggtacatatcagct 234  Q
    ||||||||| ||||||||||||||||||||||||    
T  30388403 ggtccatggttgaagaagggggtacatatcagct 30388370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 260 - 387
Target Start/End: Original strand, 25839409 - 25839536
Alignment:
Q  260 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatat 359  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  25839409 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatgt 25839508  T
Q  360 taaagtaacaggaactacgtactagaat 387  Q
    |||||||| |||||||||||||||||||    
T  25839509 taaagtaataggaactacgtactagaat 25839536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 260 - 387
Target Start/End: Original strand, 16909147 - 16909274
Alignment:
Q  260 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatat 359  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| |    
T  16909147 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcaatttccctttcaaaattatatgttattt 16909246  T
Q  360 taaagtaacaggaactacgtactagaat 387  Q
    ||||||||||||||||||||||||||||    
T  16909247 taaagtaacaggaactacgtactagaat 16909274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 260 - 387
Target Start/End: Original strand, 28389494 - 28389621
Alignment:
Q  260 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatat 359  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| |    
T  28389494 aatgtgttggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcaatttccctttcaaaattatatgttattt 28389593  T
Q  360 taaagtaacaggaactacgtactagaat 387  Q
    ||||||||||||||||||||||||||||    
T  28389594 taaagtaacaggaactacgtactagaat 28389621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 260 - 387
Target Start/End: Original strand, 52682824 - 52682951
Alignment:
Q  260 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatat 359  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| |    
T  52682824 aatgtgtaggacttttttgtgtactgttcattttcttacttattgaaactatttgcatgtcaacgaacttcaatttccctttcaaaattatatgttattt 52682923  T
Q  360 taaagtaacaggaactacgtactagaat 387  Q
    ||||||||||||||||||||||||||||    
T  52682924 taaagtaacaggaactacgtactagaat 52682951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 260 - 387
Target Start/End: Complemental strand, 19515236 - 19515109
Alignment:
Q  260 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatat 359  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| |    
T  19515236 aatgtgtaggacttttttgtgtactattcattttcttatttattgaaactatttacatgtcaatgaacttcagtttcccttttaaaattatatgttatgt 19515137  T
Q  360 taaagtaacaggaactacgtactagaat 387  Q
    |||||||| |||||||||||||||||||    
T  19515136 taaagtaataggaactacgtactagaat 19515109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 260 - 387
Target Start/End: Complemental strand, 21581626 - 21581499
Alignment:
Q  260 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatat 359  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| |    
T  21581626 aatgtgtaggacttttttgtgtactattcattttcttatttattgaaactatttacatgtcaatgaacttcagtttcccttttaaaattatatgttatgt 21581527  T
Q  360 taaagtaacaggaactacgtactagaat 387  Q
    |||||||| |||||||||||||||||||    
T  21581526 taaagtaataggaactacgtactagaat 21581499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 260 - 387
Target Start/End: Original strand, 21382741 - 21382867
Alignment:
Q  260 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatat 359  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| |    
T  21382741 aatgtgtaggactttt-tgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcaatttccctttcaaaattatatgttattt 21382839  T
Q  360 taaagtaacaggaactacgtactagaat 387  Q
    |||||||||||||||||| |||||||||    
T  21382840 taaagtaacaggaactacatactagaat 21382867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 260 - 387
Target Start/End: Complemental strand, 41859881 - 41859754
Alignment:
Q  260 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatat 359  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| |    
T  41859881 aatgtgtaagacttttttgtgtactgttcattttcttacttattgaaactatttgcatgtcaacgaacttcaatttccctttcaaaattatatgttattt 41859782  T
Q  360 taaagtaacaggaactacgtactagaat 387  Q
    ||||||||||||||||| ||||||||||    
T  41859781 taaagtaacaggaactatgtactagaat 41859754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 260 - 369
Target Start/End: Original strand, 42347830 - 42347939
Alignment:
Q  260 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatat 359  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |    
T  42347830 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacaaacttcagtttcccttttaaaattatatgttatgt 42347929  T
Q  360 taaagtaaca 369  Q
    ||||||||||    
T  42347930 taaagtaaca 42347939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 260 - 387
Target Start/End: Complemental strand, 29359222 - 29359095
Alignment:
Q  260 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatat 359  Q
    ||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||  ||||||||||||||| |    
T  29359222 aatgtgtaggacttttttgtgtattgttcattttcttacttattgaaactatttgcatgtcaacgaacttcaatttgccttccaaaattatatgttattt 29359123  T
Q  360 taaagtaacaggaactacgtactagaat 387  Q
    ||||||||||||||||||||||||||||    
T  29359122 taaagtaacaggaactacgtactagaat 29359095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 260 - 387
Target Start/End: Complemental strand, 30388038 - 30387911
Alignment:
Q  260 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatat 359  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| ||||||||||||||| |    
T  30388038 aatgtgtaggacttttttgtgtactgttcattttcttacttattgaaactatttgcatgtcaacgaacttcaattttcctttcaaaattatatgttattt 30387939  T
Q  360 taaagtaacaggaactacgtactagaat 387  Q
    || ||||||||||||||||| |||||||    
T  30387938 tatagtaacaggaactacgtgctagaat 30387911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 260 - 370
Target Start/End: Original strand, 53288400 - 53288510
Alignment:
Q  260 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatat 359  Q
    |||||||| ||||||||| |||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |    
T  53288400 aatgtgtatgacttttttttgtattattcattttcttacttattgaaactatttgcatgtcaacgtacttcagtttcccttttaaaattatatgttatgt 53288499  T
Q  360 taaagtaacag 370  Q
    |||| ||||||    
T  53288500 taaaataacag 53288510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 272 - 367
Target Start/End: Complemental strand, 31448453 - 31448356
Alignment:
Q  272 ttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtttccctttt--aaaattatatgttatattaaagtaa 367  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||  ||||||||||||||| |||||||||    
T  31448453 ttttttgtgtactattcattttcttacttattgaaattatttgcatgtcaacgaacttcagtttcccttttaaaaaattatatgttatgttaaagtaa 31448356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 384 - 437
Target Start/End: Original strand, 52683047 - 52683100
Alignment:
Q  384 gaatattaacttcttaaaatgatatgtgcgttagcacgggtcaatggtctagtt 437  Q
    |||||||| ||| || |||||| |||||||||||||||||||||||||||||||    
T  52683047 gaatattatcttttttaaatgacatgtgcgttagcacgggtcaatggtctagtt 52683100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 384 - 437
Target Start/End: Original strand, 16909370 - 16909423
Alignment:
Q  384 gaatattaacttcttaaaatgatatgtgcgttagcacgggtcaatggtctagtt 437  Q
    |||||||| ||| || |||||| | |||||||||||||||||||||||||||||    
T  16909370 gaatattatcttttttaaatgacacgtgcgttagcacgggtcaatggtctagtt 16909423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 384 - 437
Target Start/End: Original strand, 21382962 - 21383015
Alignment:
Q  384 gaatattaacttcttaaaatgatatgtgcgttagcacgggtcaatggtctagtt 437  Q
    |||||||| ||| || |||||| | |||||||||||||||||||||||||||||    
T  21382962 gaatattatcttttttaaatgacacgtgcgttagcacgggtcaatggtctagtt 21383015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 400 - 437
Target Start/End: Complemental strand, 21581387 - 21581350
Alignment:
Q  400 aaatgatatgtgcgttagcacgggtcaatggtctagtt 437  Q
    |||||| |||||||||||||||||||||||||||||||    
T  21581387 aaatgacatgtgcgttagcacgggtcaatggtctagtt 21581350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 384 - 437
Target Start/End: Original strand, 28389717 - 28389770
Alignment:
Q  384 gaatattaacttcttaaaatgatatgtgcgttagcacgggtcaatggtctagtt 437  Q
    |||||||| ||| || |||||| | |||||||||||||||||||||||||||||    
T  28389717 gaatattatcttttttaaatgacacgtgcgttagcacgggtcaatggtctagtt 28389770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 400 - 436
Target Start/End: Complemental strand, 19514997 - 19514961
Alignment:
Q  400 aaatgatatgtgcgttagcacgggtcaatggtctagt 436  Q
    |||||| ||||||||||||||||||||||||||||||    
T  19514997 aaatgacatgtgcgttagcacgggtcaatggtctagt 19514961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 384 - 436
Target Start/End: Complemental strand, 31448240 - 31448188
Alignment:
Q  384 gaatattaacttcttaaaatgatatgtgcgttagcacgggtcaatggtctagt 436  Q
    ||||||| ||||||||||||||   ||||||||||| ||||||||||||||||    
T  31448240 gaatatttacttcttaaaatgacccgtgcgttagcatgggtcaatggtctagt 31448188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 384 - 436
Target Start/End: Original strand, 42348054 - 42348106
Alignment:
Q  384 gaatattaacttcttaaaatgatatgtgcgttagcacgggtcaatggtctagt 436  Q
    ||||||| ||||||||||||||   ||||||||||| ||||||||||||||||    
T  42348054 gaatatttacttcttaaaatgacccgtgcgttagcatgggtcaatggtctagt 42348106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 387 - 437
Target Start/End: Original strand, 25839636 - 25839686
Alignment:
Q  387 tattaacttcttaaaatgatatgtgcgttagcacgggtcaatggtctagtt 437  Q
    |||||| || || |||||| | |||||||||||||||||||||||||||||    
T  25839636 tattaatttttttaaatgacacgtgcgttagcacgggtcaatggtctagtt 25839686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 400 - 437
Target Start/End: Complemental strand, 29358983 - 29358946
Alignment:
Q  400 aaatgatatgtgcgttagcacgggtcaatggtctagtt 437  Q
    |||||| | |||||||||||||||||||||||||||||    
T  29358983 aaatgacacgtgcgttagcacgggtcaatggtctagtt 29358946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 384 - 437
Target Start/End: Complemental strand, 30387816 - 30387763
Alignment:
Q  384 gaatattaacttcttaaaatgatatgtgcgttagcacgggtcaatggtctagtt 437  Q
    |||||||| ||| || |||||| | ||||||||||||||||||||| |||||||    
T  30387816 gaatattatcttttttaaatgacacgtgcgttagcacgggtcaatgatctagtt 30387763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 384 - 437
Target Start/End: Complemental strand, 41859658 - 41859605
Alignment:
Q  384 gaatattaacttcttaaaatgatatgtgcgttagcacgggtcaatggtctagtt 437  Q
    |||||||| ||| || |||||| | ||||||||||||||||||||| |||||||    
T  41859658 gaatattatcttttttaaatgacacgtgcgttagcacgggtcaatgatctagtt 41859605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 384 - 437
Target Start/End: Original strand, 53288624 - 53288677
Alignment:
Q  384 gaatattaacttcttaaaatgatatgtgcgttagcacgggtcaatggtctagtt 437  Q
    ||||||| ||||||||||||||   ||||||||||| |||||| ||||||||||    
T  53288624 gaatatttacttcttaaaatgacccgtgcgttagcatgggtcagtggtctagtt 53288677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 196; Significance: 1e-106; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 1 - 248
Target Start/End: Complemental strand, 407610 - 407363
Alignment:
Q  1 cccactagcatcattttcatgaacatgttactggtcgatgaaaaagtttctacatgtttgcactcttagctttaaaattaaactaatgtcatcgttgatt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| ||||||||||||||||||||||| |||| ||    
T  407610 cccactagcatcattttcatgaacatgttactggtcgatgaaaaggtttctgcatgtttgcactcttaactttaaaattaaactaatgtcattgttgttt 407511  T
Q  101 tttagttatgtaatttaaccagttgtttactgatgttgttgtcgttaatagggtggacgtattcacgccacagctaaaaaagatttggtggcaaagttca 200  Q
    |||||||||||||||||||||| |||||| || | |||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  407510 tttagttatgtaatttaaccagctgtttaatgtttttgttgtcgtcaatagggtggacgtattcacgccacagctagaaaagatttggtggcaaagttca 407411  T
Q  201 ggtccatgggtgaagaagggggtacatatcagcttgaaaatgcaattg 248  Q
    ||||||||| | ||||||||||||||||||||||||||||||||||||    
T  407410 ggtccatggttcaagaagggggtacatatcagcttgaaaatgcaattg 407363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 1 - 248
Target Start/End: Complemental strand, 18267449 - 18267202
Alignment:
Q  1 cccactagcatcattttcatgaacatgttactggtcgatgaaaaagtttctacatgtttgcactcttagctttaaaattaaactaatgtcatcgttgatt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| ||||||||||||| |||||||||  ||| ||    
T  18267449 cccactagcatcattttcatgaacatgttactggtcgatgaaaaggtttctgcatgtttgcactcttaactttaaaattaaagtaatgtcatttttgttt 18267350  T
Q  101 tttagttatgtaatttaaccagttgtttactgatgttgttgtcgttaatagggtggacgtattcacgccacagctaaaaaagatttggtggcaaagttca 200  Q
    |||||||||||||||||||||| |||||| || |||||||||||| || ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  18267349 tttagttatgtaatttaaccagctgtttaatgttgttgttgtcgtcaacagggtggacgtattcacgccacagctagaaaagatttggtggcaaagttca 18267250  T
Q  201 ggtccatgggtgaagaagggggtacatatcagcttgaaaatgcaattg 248  Q
    ||||||||| | ||||||||||||||||||||||||||||||||||||    
T  18267249 ggtccatggttcaagaagggggtacatatcagcttgaaaatgcaattg 18267202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 178; E-Value: 9e-96
Query Start/End: Original strand, 1 - 234
Target Start/End: Complemental strand, 22730460 - 22730227
Alignment:
Q  1 cccactagcatcattttcatgaacatgttactggtcgatgaaaaagtttctacatgtttgcactcttagctttaaaattaaactaatgtcatcgttgatt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||| | |||||||||||||||| |||||||||||||||||||||||||||| ||    
T  22730460 cccactagcatcattttcatgaacatgttactggtcgatgaaaaggtttttccatgtttgcactcttaactttaaaattaaactaatgtcatcgttgttt 22730361  T
Q  101 tttagttatgtaatttaaccagttgtttactgatgttgttgtcgttaatagggtggacgtattcacgccacagctaaaaaagatttggtggcaaagttca 200  Q
    |||||||||||||||||||||| |||||| || ||||||| |||| ||||||||||||||||||||||||||  || |||||||||||||||||||||||    
T  22730360 tttagttatgtaatttaaccagctgtttaatgttgttgttttcgtcaatagggtggacgtattcacgccacaattagaaaagatttggtggcaaagttca 22730261  T
Q  201 ggtccatgggtgaagaagggggtacatatcagct 234  Q
    ||||||||| ||||||||||||||||||||||||    
T  22730260 ggtccatggttgaagaagggggtacatatcagct 22730227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 260 - 387
Target Start/End: Complemental strand, 406172 - 406045
Alignment:
Q  260 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatat 359  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  406172 aatgtgtaggacttttttgcgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatgt 406073  T
Q  360 taaagtaacaggaactacgtactagaat 387  Q
    ||||||||||||||||||||||||||||    
T  406072 taaagtaacaggaactacgtactagaat 406045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 260 - 387
Target Start/End: Complemental strand, 18266010 - 18265883
Alignment:
Q  260 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatat 359  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  18266010 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatgt 18265911  T
Q  360 taaagtaacaggaactacgtactagaat 387  Q
    |||||||| |||||||||||||||||||    
T  18265910 taaagtaataggaactacgtactagaat 18265883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 260 - 387
Target Start/End: Complemental strand, 18275023 - 18274896
Alignment:
Q  260 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatat 359  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  18275023 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatgt 18274924  T
Q  360 taaagtaacaggaactacgtactagaat 387  Q
    |||||||| |||||||||||||||||||    
T  18274923 taaagtaaaaggaactacgtactagaat 18274896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 260 - 387
Target Start/End: Complemental strand, 14994488 - 14994361
Alignment:
Q  260 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatat 359  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| |    
T  14994488 aatgtgtaggacttttttgtgtactgttcattttcttacttattgaaactatttgcatgtcaacgaacttcaatttccctttcaaaattatatgttattt 14994389  T
Q  360 taaagtaacaggaactacgtactagaat 387  Q
    ||||||||||||||||||||||||||||    
T  14994388 taaagtaacaggaactacgtactagaat 14994361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 260 - 387
Target Start/End: Original strand, 23827850 - 23827977
Alignment:
Q  260 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatat 359  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| |    
T  23827850 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcaatttccctttcaaaattatatgttattt 23827949  T
Q  360 taaagtaacaggaactacgtactagaat 387  Q
    ||||||||||||||||| ||||||||||    
T  23827950 taaagtaacaggaactatgtactagaat 23827977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 260 - 387
Target Start/End: Original strand, 19961719 - 19961846
Alignment:
Q  260 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatat 359  Q
    |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| |    
T  19961719 aatgtgtaggacttttttgtgtactattcattttcttacttgctgaaactatttgcatgtcaacgaacttcaatttccctttcaaaattatatgttattt 19961818  T
Q  360 taaagtaacaggaactacgtactagaat 387  Q
    ||||||||||||||||||||||||||||    
T  19961819 taaagtaacaggaactacgtactagaat 19961846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 260 - 387
Target Start/End: Complemental strand, 22729895 - 22729768
Alignment:
Q  260 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatat 359  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| ||||||||||||||| |    
T  22729895 aatgtgtaggacttttttgtgtactgttcattttcttacttattgaaactatttgcatgtcaacgaaattcaatttccctttcaaaattatatgttattt 22729796  T
Q  360 taaagtaacaggaactacgtactagaat 387  Q
    ||||||||||||||||||||||||||||    
T  22729795 taaagtaacaggaactacgtactagaat 22729768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 260 - 387
Target Start/End: Complemental strand, 41376429 - 41376302
Alignment:
Q  260 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatat 359  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| ||||||||||||||| |    
T  41376429 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaaatatttgcatgtcaacgaacttcaatttccctttcaaaattatatgttattt 41376330  T
Q  360 taaagtaacaggaactacgtactagaat 387  Q
    |||||||||| |||||||||||||||||    
T  41376329 taaagtaacaagaactacgtactagaat 41376302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 260 - 370
Target Start/End: Original strand, 18492391 - 18492501
Alignment:
Q  260 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatat 359  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  18492391 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaattatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatgt 18492490  T
Q  360 taaagtaacag 370  Q
    |||||||||||    
T  18492491 taaagtaacag 18492501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 260 - 375
Target Start/End: Complemental strand, 37983455 - 37983340
Alignment:
Q  260 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatat 359  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  37983455 aatgtgtatgacttttttgtgtactattcattttcttacttattgaaattatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatgt 37983356  T
Q  360 taaagtaacaggaact 375  Q
    ||||||||||| ||||    
T  37983355 taaagtaacagaaact 37983340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 281 - 387
Target Start/End: Original strand, 21639991 - 21640097
Alignment:
Q  281 tactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatattaaagtaacaggaactacgta 380  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  21639991 tactgttcattttcttacttattgaaactatttgcatgtcaacgaacttcaatttccctttcaaaattatatgttattttaaagtaacaggaactacgta 21640090  T
Q  381 ctagaat 387  Q
    |||||||    
T  21640091 ctagaat 21640097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 260 - 375
Target Start/End: Complemental strand, 24011864 - 24011751
Alignment:
Q  260 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatat 359  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||  |||||||| |    
T  24011864 aatgtgtaagacttttttgtgtactattcattttcttacttattgaaattatttgcatgtcaacgaacttcagtttcccttttaaaat--tatgttatgt 24011767  T
Q  360 taaagtaacaggaact 375  Q
    ||||||||||| ||||    
T  24011766 taaagtaacagaaact 24011751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 148 - 246
Target Start/End: Complemental strand, 18287386 - 18287288
Alignment:
Q  148 atagggtggacgtattcacgccacagctaaaaaagatttggtggcaaagttcaggtccatgggtgaagaagggggtacatatcagcttgaaaatgcaat 246  Q
    ||||||||||||||| |||||||||| || ||| |||||||||||||  |||||||| |||| ||| ||||||| ||||||| ||||| | ||||||||    
T  18287386 atagggtggacgtatccacgccacagttagaaaggatttggtggcaagattcaggtcaatggttgaggaaggggctacatatgagcttcacaatgcaat 18287288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 384 - 437
Target Start/End: Complemental strand, 24011643 - 24011590
Alignment:
Q  384 gaatattaacttcttaaaatgatatgtgcgttagcacgggtcaatggtctagtt 437  Q
    ||||||| ||||||||||||||  |||||||||||| |||||||||||||||||    
T  24011643 gaatatttacttcttaaaatgacctgtgcgttagcatgggtcaatggtctagtt 24011590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 438
Target Start/End: Complemental strand, 22729673 - 22729619
Alignment:
Q  384 gaatattaacttcttaaaatgatatgtgcgttagcacgggtcaatggtctagttg 438  Q
    |||||||| ||| || |||||| | ||||||||||||||||||||||||||||||    
T  22729673 gaatattatcttttttaaatgacacgtgcgttagcacgggtcaatggtctagttg 22729619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 384 - 437
Target Start/End: Complemental strand, 37983232 - 37983179
Alignment:
Q  384 gaatattaacttcttaaaatgatatgtgcgttagcacgggtcaatggtctagtt 437  Q
    ||||||| ||||||||||||||   ||||||||||| |||||||||||||||||    
T  37983232 gaatatttacttcttaaaatgacccgtgcgttagcatgggtcaatggtctagtt 37983179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 384 - 436
Target Start/End: Complemental strand, 14994267 - 14994215
Alignment:
Q  384 gaatattaacttcttaaaatgatatgtgcgttagcacgggtcaatggtctagt 436  Q
    |||||||| ||| || |||||| | ||||||||||||||||||||||||||||    
T  14994267 gaatattatcttttttaaatgacacgtgcgttagcacgggtcaatggtctagt 14994215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 384 - 436
Target Start/End: Original strand, 19961942 - 19961994
Alignment:
Q  384 gaatattaacttcttaaaatgatatgtgcgttagcacgggtcaatggtctagt 436  Q
    |||||||| ||| || |||||| | ||||||||||||||||||||||||||||    
T  19961942 gaatattatcttttttaaatgacacgtgcgttagcacgggtcaatggtctagt 19961994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 408 - 438
Target Start/End: Complemental strand, 18272817 - 18272787
Alignment:
Q  408 tgtgcgttagcacgggtcaatggtctagttg 438  Q
    |||||||||||||||||||||||||||||||    
T  18272817 tgtgcgttagcacgggtcaatggtctagttg 18272787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 434
Target Start/End: Original strand, 21640192 - 21640242
Alignment:
Q  384 gaatattaacttcttaaaatgatatgtgcgttagcacgggtcaatggtcta 434  Q
    |||||||| ||| || |||||| | ||||||||||||||||||||||||||    
T  21640192 gaatattatcttttttaaatgacacgtgcgttagcacgggtcaatggtcta 21640242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 408 - 438
Target Start/End: Complemental strand, 34893052 - 34893022
Alignment:
Q  408 tgtgcgttagcacgggtcaatggtctagttg 438  Q
    |||||||||||||||||||||||||||||||    
T  34893052 tgtgcgttagcacgggtcaatggtctagttg 34893022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 400 - 437
Target Start/End: Complemental strand, 405933 - 405896
Alignment:
Q  400 aaatgatatgtgcgttagcacgggtcaatggtctagtt 437  Q
    |||||| | |||||||||||||||||||||||||||||    
T  405933 aaatgacacgtgcgttagcacgggtcaatggtctagtt 405896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 384 - 437
Target Start/End: Original strand, 18492613 - 18492666
Alignment:
Q  384 gaatattaacttcttaaaatgatatgtgcgttagcacgggtcaatggtctagtt 437  Q
    ||||||| |||| |||||||||   ||||||||||| |||||||||||||||||    
T  18492613 gaatatttactttttaaaatgacccgtgcgttagcatgggtcaatggtctagtt 18492666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 400 - 437
Target Start/End: Complemental strand, 41376191 - 41376154
Alignment:
Q  400 aaatgatatgtgcgttagcacgggtcaatggtctagtt 437  Q
    |||||| | |||||||||||||||||||||||||||||    
T  41376191 aaatgacacgtgcgttagcacgggtcaatggtctagtt 41376154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 192; Significance: 1e-104; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 1 - 248
Target Start/End: Original strand, 4592774 - 4593021
Alignment:
Q  1 cccactagcatcattttcatgaacatgttactggtcgatgaaaaagtttctacatgtttgcactcttagctttaaaattaaactaatgtcatcgttgatt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||  |||||||||||||||||||||||||||||||||||||||| |||| ||    
T  4592774 cccactagcatcattttcatgaacatgttactggtcgatgaaaaggtttcagcatgtttgcactcttagctttaaaattaaactaatgtcattgttgttt 4592873  T
Q  101 tttagttatgtaatttaaccagttgtttactgatgttgttgtcgttaatagggtggacgtattcacgccacagctaaaaaagatttggtggcaaagttca 200  Q
    |||||||||||||||||||||| |||||| || |||||||||||| ||||||||||| || ||||||||||||||| |||||||||||||||||||||||    
T  4592874 tttagttatgtaatttaaccagctgtttaatgttgttgttgtcgtcaatagggtggatgttttcacgccacagctagaaaagatttggtggcaaagttca 4592973  T
Q  201 ggtccatgggtgaagaagggggtacatatcagcttgaaaatgcaattg 248  Q
    ||||||||| | ||||||||||||||||||||||||||||||||||||    
T  4592974 ggtccatggttcaagaagggggtacatatcagcttgaaaatgcaattg 4593021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 1 - 248
Target Start/End: Original strand, 26946510 - 26946757
Alignment:
Q  1 cccactagcatcattttcatgaacatgttactggtcgatgaaaaagtttctacatgtttgcactcttagctttaaaattaaactaatgtcatcgttgatt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| ||||||||||||| |||||||||  ||| ||    
T  26946510 cccactagcatcattttcatgaacatgttactggtcgatgaaaaggtttctgcatgtttgcactcttaactttaaaattaaagtaatgtcatttttgttt 26946609  T
Q  101 tttagttatgtaatttaaccagttgtttactgatgttgttgtcgttaatagggtggacgtattcacgccacagctaaaaaagatttggtggcaaagttca 200  Q
    |||||||||||||||||||||| |||||| || |||||||||||| || ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  26946610 tttagttatgtaatttaaccagctgtttaatgttgttgttgtcgtcaacagggtggacgtattcacgccacagctagaaaagatttggtggcaaagttca 26946709  T
Q  201 ggtccatgggtgaagaagggggtacatatcagcttgaaaatgcaattg 248  Q
    ||||||||| | ||||||||||||||||||||||||||||||||||||    
T  26946710 ggtccatggttcaagaagggggtacatatcagcttgaaaatgcaattg 26946757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 1 - 234
Target Start/End: Complemental strand, 49562982 - 49562749
Alignment:
Q  1 cccactagcatcattttcatgaacatgttactggtcgatgaaaaagtttctacatgtttgcactcttagctttaaaattaaactaatgtcatcgttgatt 100  Q
    ||||||||||| |||||||||||||||||||||||||||||||| |||||| |||||||| |||||||||||||||||||||||||||||||||||| ||    
T  49562982 cccactagcataattttcatgaacatgttactggtcgatgaaaaggtttctgcatgtttgtactcttagctttaaaattaaactaatgtcatcgttgttt 49562883  T
Q  101 tttagttatgtaatttaaccagttgtttactgatgttgttgtcgttaatagggtggacgtattcacgccacagctaaaaaagatttggtggcaaagttca 200  Q
    |||||||||||||||||||||| |||||| || ||||||| |||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  49562882 tttagttatgtaatttaaccagctgtttaatgttgttgttttcgtcaatagggtggacgtattcacgccacagctagaaaagatttggtggcaaagttca 49562783  T
Q  201 ggtccatgggtgaagaagggggtacatatcagct 234  Q
    ||||||||| ||||||||||||||||||||||||    
T  49562782 ggtccatggttgaagaagggggtacatatcagct 49562749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 35715847 - 35716085
Alignment:
Q  1 cccactagcatcattttcatgaacatgttactggtcgatgaaaaagtttctacatgtttgcactcttagctttaaaattaaactaatgtcatcgttgatt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||| | |||||||| |||||||||||||||||||||||||||||||||||| ||    
T  35715847 cccactagcatcattttcatgaacatgttactggtcgatgaaaaggtttttgcatgtttgtactcttagctttaaaattaaactaatgtcatcgttgttt 35715946  T
Q  101 tttagttatgtaatttaaccagttgtttactgatgttgttgtcgttaatagggtggacgtattcacgccacagctaaaaaagatttggtggcaaagttca 200  Q
    |||||||||||||||||||||| |||||| || ||||||| |||| |||||||||||||||||||||||||||||| ||||||||||||| |||| ||||    
T  35715947 tttagttatgtaatttaaccagctgtttaatgttgttgttttcgtcaatagggtggacgtattcacgccacagctagaaaagatttggtgtcaaaattca 35716046  T
Q  201 ggtccatgggtgaagaagggggtacatatcagcttgaaa 239  Q
    ||||||||| |||||||||||||||||||||||| ||||    
T  35716047 ggtccatggttgaagaagggggtacatatcagctcgaaa 35716085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 1 - 234
Target Start/End: Complemental strand, 36088163 - 36087930
Alignment:
Q  1 cccactagcatcattttcatgaacatgttactggtcgatgaaaaagtttctacatgtttgcactcttagctttaaaattaaactaatgtcatcgttgatt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| ||||||||||||||||||||||| |||| ||    
T  36088163 cccactagcatcattttcatgaacatgttactggtcgatgaaaaggtttctgcatgtttgcactcttaactttaaaattaaactaatgtcatagttgttt 36088064  T
Q  101 tttagttatgtaatttaaccagttgtttactgatgttgttgtcgttaatagggtggacgtattcacgccacagctaaaaaagatttggtggcaaagttca 200  Q
    ||||| |||||||||||||||| |||||| || || |||| |||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  36088063 tttagctatgtaatttaaccagctgtttaatgttggtgttttcgtcaatagggtggacgtattcacaccacagctagaaaagatttggtggcaaagttca 36087964  T
Q  201 ggtccatgggtgaagaagggggtacatatcagct 234  Q
    ||||||||| ||||||| ||| ||||||||||||    
T  36087963 ggtccatggttgaagaacgggctacatatcagct 36087930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 32 - 248
Target Start/End: Original strand, 16650113 - 16650329
Alignment:
Q  32 tggtcgatgaaaaagtttctacatgtttgcactcttagctttaaaattaaactaatgtcatcgttgatttttagttatgtaatttaaccagttgtttact 131  Q
    |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||| |||||||||||| |||||| |    
T  16650113 tggttgatgaaaaggtttctacatgtttgcactcttagctttaaaattaaactaatgtcattgttgttttttagttatctaatttaaccagctgtttaat 16650212  T
Q  132 gatgttgttgtcgttaatagggtggacgtattcacgccacagctaaaaaagatttggtggcaaagttcaggtccatgggtgaagaagggggtacatatca 231  Q
    | |||||||||||| ||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||| | ||||||||||||||| |||    
T  16650213 gttgttgttgtcgtcaatagggtggacgtattcacgccacaggtagaaaagatttggtggcaaagttcaggtccatggttcaagaagggggtacatttca 16650312  T
Q  232 gcttgaaaatgcaattg 248  Q
    |||||||||||||||||    
T  16650313 gcttgaaaatgcaattg 16650329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 32 - 248
Target Start/End: Complemental strand, 13456303 - 13456086
Alignment:
Q  32 tggtcgatgaaaaagtttctacatgtttgcactcttagctttaaaattaaactaatgtcatcgttgat-ttttagttatgtaatttaaccagttgtttac 130  Q
    |||| |||||||| |||||| |||||||||||||||||||||||||||||||||||||||| |||| | |||||||||| |||||||||||| ||||||     
T  13456303 tggttgatgaaaaggtttctgcatgtttgcactcttagctttaaaattaaactaatgtcattgttgttgttttagttatctaatttaaccagctgtttaa 13456204  T
Q  131 tgatgttgttgtcgttaatagggtggacgtattcacgccacagctaaaaaagatttggtggcaaagttcaggtccatgggtgaagaagggggtacatatc 230  Q
    || |||||||||||| ||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||| | ||||||||||||||| ||    
T  13456203 tgttgttgttgtcgtcaatagggtggacgtattcacgccacaggtagaaaagatttggtggcaaagttcaggtccatggttcaagaagggggtacatttc 13456104  T
Q  231 agcttgaaaatgcaattg 248  Q
    ||||||||||||||||||    
T  13456103 agcttgaaaatgcaattg 13456086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 260 - 387
Target Start/End: Complemental strand, 13454891 - 13454764
Alignment:
Q  260 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatat 359  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  13454891 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatgt 13454792  T
Q  360 taaagtaacaggaactacgtactagaat 387  Q
    ||||||||||||||||||||||||||||    
T  13454791 taaagtaacaggaactacgtactagaat 13454764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 260 - 387
Target Start/End: Complemental strand, 36947165 - 36947038
Alignment:
Q  260 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatat 359  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  36947165 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatgt 36947066  T
Q  360 taaagtaacaggaactacgtactagaat 387  Q
    ||||||||||||||||||||||||||||    
T  36947065 taaagtaacaggaactacgtactagaat 36947038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 260 - 387
Target Start/End: Original strand, 4594216 - 4594343
Alignment:
Q  260 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatat 359  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |    
T  4594216 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtttctcttttaaaattatatgttatgt 4594315  T
Q  360 taaagtaacaggaactacgtactagaat 387  Q
    ||||||||||||||||||||||||||||    
T  4594316 taaagtaacaggaactacgtactagaat 4594343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 260 - 383
Target Start/End: Original strand, 12825304 - 12825427
Alignment:
Q  260 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatat 359  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  12825304 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatgt 12825403  T
Q  360 taaagtaacaggaactacgtacta 383  Q
    ||||||||||||||||||||||||    
T  12825404 taaagtaacaggaactacgtacta 12825427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 260 - 387
Target Start/End: Original strand, 16651524 - 16651651
Alignment:
Q  260 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatat 359  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  16651524 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatgt 16651623  T
Q  360 taaagtaacaggaactacgtactagaat 387  Q
    |||||||||||| |||||||||||||||    
T  16651624 taaagtaacaggtactacgtactagaat 16651651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 260 - 387
Target Start/End: Complemental strand, 52418803 - 52418676
Alignment:
Q  260 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatat 359  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  52418803 aatgtataggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatgt 52418704  T
Q  360 taaagtaacaggaactacgtactagaat 387  Q
    ||||||||||||||||||||||||||||    
T  52418703 taaagtaacaggaactacgtactagaat 52418676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 267 - 387
Target Start/End: Original strand, 12260939 - 12261059
Alignment:
Q  267 aggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatattaaagta 366  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  12260939 aggacttttttgtgtactattcattttcttatttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatgttaaagta 12261038  T
Q  367 acaggaactacgtactagaat 387  Q
    |||||||||||||||||||||    
T  12261039 acaggaactacgtactagaat 12261059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 260 - 387
Target Start/End: Original strand, 26951611 - 26951738
Alignment:
Q  260 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatat 359  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| |    
T  26951611 aatgtgtaggacttttttgtgtactgttcattttcttacttattgaaactatttgcatgtcaacgaacttcaatttccctttcaaaattatatgttattt 26951710  T
Q  360 taaagtaacaggaactacgtactagaat 387  Q
    ||||||||||||||||||||||||||||    
T  26951711 taaagtaacaggaactacgtactagaat 26951738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 260 - 387
Target Start/End: Complemental strand, 38655931 - 38655804
Alignment:
Q  260 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatat 359  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| |    
T  38655931 aatgtgtaggacttttttgtgtactgttcattttcttacttattgaaactatttgcatgtcaacgaacttcaatttccctttcaaaattatatgttattt 38655832  T
Q  360 taaagtaacaggaactacgtactagaat 387  Q
    ||||||||||||||||||||||||||||    
T  38655831 taaagtaacaggaactacgtactagaat 38655804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 260 - 387
Target Start/End: Original strand, 18198807 - 18198934
Alignment:
Q  260 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatat 359  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||||||| |    
T  18198807 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacaaacttcaatttccctttcaaaattatatgttattt 18198906  T
Q  360 taaagtaacaggaactacgtactagaat 387  Q
    ||| ||||||||||||||||||||||||    
T  18198907 taatgtaacaggaactacgtactagaat 18198934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 264 - 387
Target Start/End: Original strand, 35716417 - 35716540
Alignment:
Q  264 tgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatattaaa 363  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| |||||    
T  35716417 tgtaggacttttttgtgtactgttcattttcttacttattgaaactatttgcatgtcaacgaacttcaatttccctttcaaaattatatgttattttaaa 35716516  T
Q  364 gtaacaggaactacgtactagaat 387  Q
    ||||||||||||||||||||||||    
T  35716517 gtaacaggaactacgtactagaat 35716540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 260 - 387
Target Start/End: Complemental strand, 36087598 - 36087471
Alignment:
Q  260 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatat 359  Q
    |||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| |    
T  36087598 aatgtgtaggacttttttgtatactgttcattttcttacttattgaaactatttgcatgtcaacgaacttcaatttccctttcaaaattatatgttattt 36087499  T
Q  360 taaagtaacaggaactacgtactagaat 387  Q
    ||||||||||||||||||||||||||||    
T  36087498 taaagtaacaggaactacgtactagaat 36087471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 260 - 375
Target Start/End: Original strand, 11826580 - 11826695
Alignment:
Q  260 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatat 359  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |    
T  11826580 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagttttccttttaaaattatatgttatgt 11826679  T
Q  360 taaagtaacaggaact 375  Q
    ||||||||||| ||||    
T  11826680 taaagtaacagaaact 11826695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 260 - 387
Target Start/End: Original strand, 31487328 - 31487454
Alignment:
Q  260 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatat 359  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| |    
T  31487328 aatgtgtaggactttt-tgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcaatttccctttcaaaattatatgttattt 31487426  T
Q  360 taaagtaacaggaactacgtactagaat 387  Q
    |||||||||||||||||| |||||||||    
T  31487427 taaagtaacaggaactacatactagaat 31487454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 260 - 387
Target Start/End: Complemental strand, 36091436 - 36091309
Alignment:
Q  260 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatat 359  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| ||||||||||||||| |    
T  36091436 aatgtgtatgacttttttgtgtactgttcattttcttacttattgaaactatttgcatgtcaacgaaattcaatttccctttcaaaattatatgttattt 36091337  T
Q  360 taaagtaacaggaactacgtactagaat 387  Q
    ||||||||||||||||||||||||||||    
T  36091336 taaagtaacaggaactacgtactagaat 36091309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 260 - 387
Target Start/End: Complemental strand, 49562417 - 49562290
Alignment:
Q  260 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatat 359  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| |    
T  49562417 aatgtgtatgacttttttgtgtactgttcattttcttacttattgaaactatttgcatgtcaacgaacttcaatttccctttcaaaattatatgttattt 49562318  T
Q  360 taaagtaacaggaactacgtactagaat 387  Q
    |||||||||| |||||||||||||||||    
T  49562317 taaagtaacaagaactacgtactagaat 49562290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 260 - 380
Target Start/End: Complemental strand, 33003893 - 33003773
Alignment:
Q  260 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatat 359  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  33003893 aatgtgtatgacttttttgtgtactattcattttcttacttattgaaattatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatgt 33003794  T
Q  360 taaagtaacaggaactacgta 380  Q
    ||||||||||| |||| ||||    
T  33003793 taaagtaacagaaactgcgta 33003773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 260 - 387
Target Start/End: Original strand, 854679 - 854806
Alignment:
Q  260 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatat 359  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| |||||| || ||||||||||||||| |    
T  854679 aatgtgtaggacttttttgtgtactgttcattttcttacttattgaaagtatttgcatgtcaacgaacttcaatttccccttcaaaattatatgttattt 854778  T
Q  360 taaagtaacaggaactacgtactagaat 387  Q
    |||||||| |||||||||||||||||||    
T  854779 taaagtaataggaactacgtactagaat 854806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 260 - 375
Target Start/End: Original strand, 859939 - 860054
Alignment:
Q  260 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatat 359  Q
    |||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |    
T  859939 aatgtgtatgacttttttgtgtactattcattttcttatttattgaaactatttgcatgtcaacgaacttcaatttcccttttaaaattatatgttatgt 860038  T
Q  360 taaagtaacaggaact 375  Q
    ||||||||||||||||    
T  860039 taaagtaacaggaact 860054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 260 - 334
Target Start/End: Original strand, 26947952 - 26948026
Alignment:
Q  260 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtt 334  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  26947952 aatgtgtaggacttttttgggtactattcattttcttacttattgaaagtatttgcatgtcaacgaacttcagtt 26948026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 324 - 387
Target Start/End: Complemental strand, 29864770 - 29864707
Alignment:
Q  324 gaacttcagtttcccttttaaaattatatgttatattaaagtaacaggaactacgtactagaat 387  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  29864770 gaacttcagtttcccttttaaaattatatgttatgttaaagtaacaggaactacgtactagaat 29864707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 309 - 370
Target Start/End: Original strand, 47726776 - 47726837
Alignment:
Q  309 tatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatattaaagtaacag 370  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  47726776 tatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatgttaaagtaacag 47726837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 148 - 246
Target Start/End: Original strand, 18207143 - 18207241
Alignment:
Q  148 atagggtggacgtattcacgccacagctaaaaaagatttggtggcaaagttcaggtccatgggtgaagaagggggtacatatcagcttgaaaatgcaat 246  Q
    ||||||||||||||| |||||||||| || ||| |||||||||||||  |||||||| |||| ||| ||||||| ||||||| ||||| | ||||||||    
T  18207143 atagggtggacgtatccacgccacagttagaaaggatttggtggcaagattcaggtcaatggttgaggaaggggctacatatgagcttcacaatgcaat 18207241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 133 - 209
Target Start/End: Complemental strand, 16472753 - 16472677
Alignment:
Q  133 atgttgttgtcgttaatagggtggacgtattcacgccacagctaaaaaagatttggtggcaaagttcaggtccatgg 209  Q
    ||||||||||| |  ||||||||||||||| ||| |||| | || |||||| |||||||||||||||||||| ||||    
T  16472753 atgttgttgtcatctatagggtggacgtatccacaccacggttagaaaagaattggtggcaaagttcaggtcaatgg 16472677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 384 - 436
Target Start/End: Complemental strand, 36946941 - 36946889
Alignment:
Q  384 gaatattaacttcttaaaatgatatgtgcgttagcacgggtcaatggtctagt 436  Q
    |||||||||||| | |||||||  |||||||||||||||||||||||||||||    
T  36946941 gaatattaacttttgaaaatgacttgtgcgttagcacgggtcaatggtctagt 36946889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 384 - 437
Target Start/End: Original strand, 35716635 - 35716688
Alignment:
Q  384 gaatattaacttcttaaaatgatatgtgcgttagcacgggtcaatggtctagtt 437  Q
    |||||||| ||| || |||||| | |||||||||||||||||||||||||||||    
T  35716635 gaatattatcttttttaaatgacacgtgcgttagcacgggtcaatggtctagtt 35716688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 384 - 437
Target Start/End: Complemental strand, 43508666 - 43508613
Alignment:
Q  384 gaatattaacttcttaaaatgatatgtgcgttagcacgggtcaatggtctagtt 437  Q
    ||||||| ||||||||||||||   ||||||||||| |||||||||||||||||    
T  43508666 gaatatttacttcttaaaatgacccgtgcgttagcatgggtcaatggtctagtt 43508613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 384 - 436
Target Start/End: Original strand, 854903 - 854955
Alignment:
Q  384 gaatattaacttcttaaaatgatatgtgcgttagcacgggtcaatggtctagt 436  Q
    |||||||| ||| || |||||| | ||||||||||||||||||||||||||||    
T  854903 gaatattatcttttttaaatgacacgtgcgttagcacgggtcaatggtctagt 854955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 384 - 436
Target Start/End: Original strand, 11826803 - 11826855
Alignment:
Q  384 gaatattaacttcttaaaatgatatgtgcgttagcacgggtcaatggtctagt 436  Q
    ||||||| ||||||||||||||   ||||||||||| ||||||||||||||||    
T  11826803 gaatatttacttcttaaaatgacccgtgcgttagcatgggtcaatggtctagt 11826855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 384 - 436
Target Start/End: Original strand, 18199030 - 18199082
Alignment:
Q  384 gaatattaacttcttaaaatgatatgtgcgttagcacgggtcaatggtctagt 436  Q
    |||||||| ||| || |||||| | ||||||||||||||||||||||||||||    
T  18199030 gaatattatcttttttaaatgacacgtgcgttagcacgggtcaatggtctagt 18199082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 384 - 436
Target Start/End: Original strand, 31487549 - 31487601
Alignment:
Q  384 gaatattaacttcttaaaatgatatgtgcgttagcacgggtcaatggtctagt 436  Q
    |||||||| ||| || |||||| | ||||||||||||||||||||||||||||    
T  31487549 gaatattatcttttttaaatgacacgtgcgttagcacgggtcaatggtctagt 31487601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 384 - 436
Target Start/End: Complemental strand, 36087376 - 36087324
Alignment:
Q  384 gaatattaacttcttaaaatgatatgtgcgttagcacgggtcaatggtctagt 436  Q
    |||||||| ||| || |||||| | ||||||||||||||||||||||||||||    
T  36087376 gaatattatcttttttaaatgacacgtgcgttagcacgggtcaatggtctagt 36087324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 384 - 436
Target Start/End: Complemental strand, 49562195 - 49562143
Alignment:
Q  384 gaatattaacttcttaaaatgatatgtgcgttagcacgggtcaatggtctagt 436  Q
    |||||||| ||| || |||||| | ||||||||||||||||||||||||||||    
T  49562195 gaatattatcttttttaaatgacacgtgcgttagcacgggtcaatggtctagt 49562143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 435
Target Start/End: Complemental strand, 33003673 - 33003622
Alignment:
Q  384 gaatattaacttcttaaaatgatatgtgcgttagcacgggtcaatggtctag 435  Q
    ||||||| ||||||||||||||   ||||||||||| |||||||||||||||    
T  33003673 gaatatttacttcttaaaatgacccgtgcgttagcatgggtcaatggtctag 33003622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 434
Target Start/End: Original strand, 860163 - 860213
Alignment:
Q  384 gaatattaacttcttaaaatgatatgtgcgttagcacgggtcaatggtcta 434  Q
    ||||||| ||||||||||||||   || |||||||||||||||||||||||    
T  860163 gaatatttacttcttaaaatgacccgtacgttagcacgggtcaatggtcta 860213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 400 - 437
Target Start/End: Original strand, 4594455 - 4594492
Alignment:
Q  400 aaatgatatgtgcgttagcacgggtcaatggtctagtt 437  Q
    |||||| | |||||||||||||||||||||||||||||    
T  4594455 aaatgacacgtgcgttagcacgggtcaatggtctagtt 4594492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 387 - 436
Target Start/End: Original strand, 26948147 - 26948196
Alignment:
Q  387 tattaacttcttaaaatgatatgtgcgttagcacgggtcaatggtctagt 436  Q
    |||||| || || |||||| | ||||||||||||||||||||||||||||    
T  26948147 tattaatttttttaaatgacacgtgcgttagcacgggtcaatggtctagt 26948196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 400 - 436
Target Start/End: Original strand, 12261171 - 12261207
Alignment:
Q  400 aaatgatatgtgcgttagcacgggtcaatggtctagt 436  Q
    |||||| | ||||||||||||||||||||||||||||    
T  12261171 aaatgacacgtgcgttagcacgggtcaatggtctagt 12261207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 400 - 436
Target Start/End: Original strand, 12825543 - 12825579
Alignment:
Q  400 aaatgatatgtgcgttagcacgggtcaatggtctagt 436  Q
    |||||| | ||||||||||||||||||||||||||||    
T  12825543 aaatgacacgtgcgttagcacgggtcaatggtctagt 12825579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 400 - 436
Target Start/End: Complemental strand, 13454652 - 13454616
Alignment:
Q  400 aaatgatatgtgcgttagcacgggtcaatggtctagt 436  Q
    |||||| | ||||||||||||||||||||||||||||    
T  13454652 aaatgacacgtgcgttagcacgggtcaatggtctagt 13454616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 400 - 436
Target Start/End: Original strand, 16651763 - 16651799
Alignment:
Q  400 aaatgatatgtgcgttagcacgggtcaatggtctagt 436  Q
    |||||| | ||||||||||||||||||||||||||||    
T  16651763 aaatgacacgtgcgttagcacgggtcaatggtctagt 16651799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 408 - 436
Target Start/End: Original strand, 18256607 - 18256635
Alignment:
Q  408 tgtgcgttagcacgggtcaatggtctagt 436  Q
    |||||||||||||||||||||||||||||    
T  18256607 tgtgcgttagcacgggtcaatggtctagt 18256635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 384 - 436
Target Start/End: Original strand, 26951834 - 26951886
Alignment:
Q  384 gaatattaacttcttaaaatgatatgtgcgttagcacgggtcaatggtctagt 436  Q
    |||||||| ||| || |||||| | |||||||||||| |||||||||||||||    
T  26951834 gaatattatcttttttaaatgacacgtgcgttagcacaggtcaatggtctagt 26951886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 400 - 436
Target Start/End: Complemental strand, 29864595 - 29864559
Alignment:
Q  400 aaatgatatgtgcgttagcacgggtcaatggtctagt 436  Q
    |||||| | ||||||||||||||||||||||||||||    
T  29864595 aaatgacacgtgcgttagcacgggtcaatggtctagt 29864559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 400 - 436
Target Start/End: Complemental strand, 36091197 - 36091161
Alignment:
Q  400 aaatgatatgtgcgttagcacgggtcaatggtctagt 436  Q
    |||||| | ||||||||||||||||||||||||||||    
T  36091197 aaatgacacgtgcgttagcacgggtcaatggtctagt 36091161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 400 - 436
Target Start/End: Complemental strand, 38655691 - 38655655
Alignment:
Q  400 aaatgatatgtgcgttagcacgggtcaatggtctagt 436  Q
    |||||| | ||||||||||||||||||||||||||||    
T  38655691 aaatgacacgtgcgttagcacgggtcaatggtctagt 38655655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 384 - 436
Target Start/End: Original strand, 47726949 - 47727001
Alignment:
Q  384 gaatattaacttcttaaaatgatatgtgcgttagcacgggtcaatggtctagt 436  Q
    ||||||| |||| |||||||||   ||||||||||| ||||||||||||||||    
T  47726949 gaatatttacttattaaaatgacccgtgcgttagcatgggtcaatggtctagt 47727001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 188; Significance: 1e-102; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 1 - 248
Target Start/End: Original strand, 23182653 - 23182900
Alignment:
Q  1 cccactagcatcattttcatgaacatgttactggtcgatgaaaaagtttctacatgtttgcactcttagctttaaaattaaactaatgtcatcgttgatt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| ||||||||||||| |||||||||  ||| ||    
T  23182653 cccactagcatcattttcatgaacatgttactggtcgatgaaaaggtttctgcatgtttgcactcttaactttaaaattaaagtaatgtcatttttgttt 23182752  T
Q  101 tttagttatgtaatttaaccagttgtttactgatgttgttgtcgttaatagggtggacgtattcacgccacagctaaaaaagatttggtggcaaagttca 200  Q
    |||||||||||||||||||||| |||||| || |||||||||||| || ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  23182753 tttagttatgtaatttaaccagctgtttaatgttgttgttgtcgtcaacagggtggacgtattcacgccacagctagaaaagatttggtggcaaagttca 23182852  T
Q  201 ggtccatgggtgaagaagggggtacatatcagcttgaaaatgcaattg 248  Q
    ||||||||| | ||||||||||||||||||||||||||||||||||||    
T  23182853 ggtccatggttcaagaagggggtacatatcagcttgaaaatgcaattg 23182900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 1 - 248
Target Start/End: Original strand, 23186920 - 23187167
Alignment:
Q  1 cccactagcatcattttcatgaacatgttactggtcgatgaaaaagtttctacatgtttgcactcttagctttaaaattaaactaatgtcatcgttgatt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| ||||||||||||| |||||||||  ||| ||    
T  23186920 cccactagcatcattttcatgaacatgttactggtcgatgaaaaggtttctgcatgtttgcactcttaactttaaaattaaagtaatgtcatttttgttt 23187019  T
Q  101 tttagttatgtaatttaaccagttgtttactgatgttgttgtcgttaatagggtggacgtattcacgccacagctaaaaaagatttggtggcaaagttca 200  Q
    |||||||||||||||||||||| |||||| || |||||||||||| || ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  23187020 tttagttatgtaatttaaccagctgtttaatgttgttgttgtcgtcaacagggtggacgtattcacgccacagctagaaaagatttggtggcaaagttca 23187119  T
Q  201 ggtccatgggtgaagaagggggtacatatcagcttgaaaatgcaattg 248  Q
    ||||||||| | ||||||||||||||||||||||||||||||||||||    
T  23187120 ggtccatggttcaagaagggggtacatatcagcttgaaaatgcaattg 23187167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 1 - 248
Target Start/End: Original strand, 34759914 - 34760161
Alignment:
Q  1 cccactagcatcattttcatgaacatgttactggtcgatgaaaaagtttctacatgtttgcactcttagctttaaaattaaactaatgtcatcgttgatt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| ||||||||||||| |||||||||  ||| ||    
T  34759914 cccactagcatcattttcatgaacatgttactggtcgatgaaaaggtttctgcatgtttgcactcttaactttaaaattaaagtaatgtcatttttgttt 34760013  T
Q  101 tttagttatgtaatttaaccagttgtttactgatgttgttgtcgttaatagggtggacgtattcacgccacagctaaaaaagatttggtggcaaagttca 200  Q
    |||||||||||||||||||||| |||||| || |||||||||||| || ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  34760014 tttagttatgtaatttaaccagctgtttaatgttgttgttgtcgtcaacagggtggacgtattcacgccacagctagaaaagatttggtggcaaagttca 34760113  T
Q  201 ggtccatgggtgaagaagggggtacatatcagcttgaaaatgcaattg 248  Q
    ||||||||| | ||||||||||||||||||||||||||||||||||||    
T  34760114 ggtccatggttcaagaagggggtacatatcagcttgaaaatgcaattg 34760161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 1 - 248
Target Start/End: Original strand, 12653868 - 12654115
Alignment:
Q  1 cccactagcatcattttcatgaacatgttactggtcgatgaaaaagtttctacatgtttgcactcttagctttaaaattaaactaatgtcatcgttgatt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| ||||||||||||| |||||||||  ||| ||    
T  12653868 cccactagcatcattttcatgaacatgttactggtcgatgaaaaggtttctgcatgtttgcactcttaactttaaaattaaagtaatgtcatttttgttt 12653967  T
Q  101 tttagttatgtaatttaaccagttgtttactgatgttgttgtcgttaatagggtggacgtattcacgccacagctaaaaaagatttggtggcaaagttca 200  Q
    |||||||||||||||||||||| |||||| || |||||||||||| || ||||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  12653968 tttagttatgtaatttaaccagctgtttaatgttgttgttgtcgtcaacagggtggacgtattcacgccacaactagaaaagatttggtggcaaagttca 12654067  T
Q  201 ggtccatgggtgaagaagggggtacatatcagcttgaaaatgcaattg 248  Q
    ||||||||| | ||||||||||||||||||||||||||||||||||||    
T  12654068 ggtccatggttcaagaagggggtacatatcagcttgaaaatgcaattg 12654115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 1 - 248
Target Start/End: Original strand, 39876748 - 39876995
Alignment:
Q  1 cccactagcatcattttcatgaacatgttactggtcgatgaaaaagtttctacatgtttgcactcttagctttaaaattaaactaatgtcatcgttgatt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| ||||||||||||| |||||||||  ||| ||    
T  39876748 cccactagcatcattttcatgaacatgttactggtcgatgaaaaggtttctgcatgtttgcactcttaactttaaaattaaagtaatgtcatttttgttt 39876847  T
Q  101 tttagttatgtaatttaaccagttgtttactgatgttgttgtcgttaatagggtggacgtattcacgccacagctaaaaaagatttggtggcaaagttca 200  Q
    | |||||||||||||||||||| |||||| || |||||||||||| || ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  39876848 tgtagttatgtaatttaaccagctgtttaatgttgttgttgtcgtcaacagggtggacgtattcacgccacagctagaaaagatttggtggcaaagttca 39876947  T
Q  201 ggtccatgggtgaagaagggggtacatatcagcttgaaaatgcaattg 248  Q
    ||||||||| | ||||||||||||||||||||||||||||||||||||    
T  39876948 ggtccatggttcaagaagggggtacatatcagcttgaaaatgcaattg 39876995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 165; E-Value: 5e-88
Query Start/End: Original strand, 32 - 248
Target Start/End: Complemental strand, 20106513 - 20106297
Alignment:
Q  32 tggtcgatgaaaaagtttctacatgtttgcactcttagctttaaaattaaactaatgtcatcgttgatttttagttatgtaatttaaccagttgtttact 131  Q
    |||| |||||||| |||||| |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| |||||| |    
T  20106513 tggttgatgaaaaggtttctgcatgtttgcactcttagctttaaaattaaactaatgtcattgttgttttttagttatgtaatttaaccagctgtttaat 20106414  T
Q  132 gatgttgttgtcgttaatagggtggacgtattcacgccacagctaaaaaagatttggtggcaaagttcaggtccatgggtgaagaagggggtacatatca 231  Q
    | |||||||||||| |||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| | |||||||||||||||||||    
T  20106413 gttgttgttgtcgtcaatagggtggacatattcacgccacagctagaaaagatttggtggcaaagttcaggtccatggttcaagaagggggtacatatca 20106314  T
Q  232 gcttgaaaatgcaattg 248  Q
    |||||||||||||||||    
T  20106313 gcttgaaaatgcaattg 20106297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 32 - 248
Target Start/End: Complemental strand, 30091773 - 30091557
Alignment:
Q  32 tggtcgatgaaaaagtttctacatgtttgcactcttagctttaaaattaaactaatgtcatcgttgatttttagttatgtaatttaaccagttgtttact 131  Q
    |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||| |||||||||||| |||||| |    
T  30091773 tggttgatgaaaaggtttctacatgtttgcactcttagctttaaaattaaactaatgtcattgttgttttttagttatctaatttaaccagctgtttaat 30091674  T
Q  132 gatgttgttgtcgttaatagggtggacgtattcacgccacagctaaaaaagatttggtggcaaagttcaggtccatgggtgaagaagggggtacatatca 231  Q
    | |||||||||||| ||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||| | ||||||||||||||| |||    
T  30091673 gttgttgttgtcgtcaatagggtggacgtattcacgccacaggtagaaaagatttggtggcaaagttcaggtccatggttcaagaagggggtacatttca 30091574  T
Q  232 gcttgaaaatgcaattg 248  Q
    |||||||||||||||||    
T  30091573 gcttgaaaatgcaattg 30091557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 32 - 248
Target Start/End: Complemental strand, 3609359 - 3609142
Alignment:
Q  32 tggtcgatgaaaaagtttctacatgtttgcactcttagctttaaaattaaactaatgtcatcgttgat-ttttagttatgtaatttaaccagttgtttac 130  Q
    |||| |||||||| |||||| |||||||||||||||||||||||||||||||||||||||| |||| | |||||||||| |||||||||||| ||||||     
T  3609359 tggttgatgaaaaggtttctgcatgtttgcactcttagctttaaaattaaactaatgtcattgttgttgttttagttatctaatttaaccagctgtttaa 3609260  T
Q  131 tgatgttgttgtcgttaatagggtggacgtattcacgccacagctaaaaaagatttggtggcaaagttcaggtccatgggtgaagaagggggtacatatc 230  Q
    || |||||||||||| ||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||| | ||||||||||||||| ||    
T  3609259 tgttgttgttgtcgtcaatagggtggacgtattcacgccacaggtagaaaagatttggtggcaaagttcaggtccatggttcaagaagggggtacatttc 3609160  T
Q  231 agcttgaaaatgcaattg 248  Q
    ||||||||||||||||||    
T  3609159 agcttgaaaatgcaattg 3609142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 260 - 387
Target Start/End: Complemental strand, 3607947 - 3607820
Alignment:
Q  260 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatat 359  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  3607947 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatgt 3607848  T
Q  360 taaagtaacaggaactacgtactagaat 387  Q
    ||||||||||||||||||||||||||||    
T  3607847 taaagtaacaggaactacgtactagaat 3607820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 260 - 387
Target Start/End: Complemental strand, 30090362 - 30090235
Alignment:
Q  260 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatat 359  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  30090362 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatgt 30090263  T
Q  360 taaagtaacaggaactacgtactagaat 387  Q
    |||||||||||| |||||||||||||||    
T  30090262 taaagtaacaggtactacgtactagaat 30090235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 260 - 387
Target Start/End: Complemental strand, 20105102 - 20104976
Alignment:
Q  260 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatat 359  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  20105102 aatgtgtaggacttttt-gtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatgt 20105004  T
Q  360 taaagtaacaggaactacgtactagaat 387  Q
    ||||||||||||||||||||||||||||    
T  20105003 taaagtaacaggaactacgtactagaat 20104976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 260 - 387
Target Start/End: Original strand, 32674988 - 32675114
Alignment:
Q  260 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatat 359  Q
    |||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| |    
T  32674988 aatgtgtaggactttt-tgtgtactgttcattttcttacttattgaaactatttgcatgtcaacgaacttcaatttccctttcaaaattatatgttattt 32675086  T
Q  360 taaagtaacaggaactacgtactagaat 387  Q
    ||||||||||||||||||||||||||||    
T  32675087 taaagtaacaggaactacgtactagaat 32675114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 260 - 334
Target Start/End: Original strand, 12655310 - 12655384
Alignment:
Q  260 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtt 334  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  12655310 aatgtgtaggacttttttgggtactattcattttcttacttattgaaagtatttgcatgtcaacgaacttcagtt 12655384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 260 - 334
Target Start/End: Original strand, 23184095 - 23184169
Alignment:
Q  260 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtt 334  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  23184095 aatgtgtaggacttttttgggtactattcattttcttacttattgaaagtatttgcatgtcaacgaacttcagtt 23184169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 260 - 334
Target Start/End: Original strand, 23188362 - 23188436
Alignment:
Q  260 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtt 334  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  23188362 aatgtgtaggacttttttgggtactattcattttcttacttattgaaagtatttgcatgtcaacgaacttcagtt 23188436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 260 - 334
Target Start/End: Original strand, 34761356 - 34761430
Alignment:
Q  260 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtt 334  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  34761356 aatgtgtaggacttttttgggtactattcattttcttacttattgaaagtatttgcatgtcaacgaacttcagtt 34761430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 260 - 334
Target Start/End: Original strand, 39878190 - 39878264
Alignment:
Q  260 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtt 334  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  39878190 aatgtgtaggacttttttgggtactattcattttcttacttattgaaagtatttgcatgtcaacgaacttcagtt 39878264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 387 - 437
Target Start/End: Original strand, 12655504 - 12655554
Alignment:
Q  387 tattaacttcttaaaatgatatgtgcgttagcacgggtcaatggtctagtt 437  Q
    |||||| || || |||||| | |||||||||||||||||||||||||||||    
T  12655504 tattaatttttttaaatgacacgtgcgttagcacgggtcaatggtctagtt 12655554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 387 - 437
Target Start/End: Original strand, 34761551 - 34761601
Alignment:
Q  387 tattaacttcttaaaatgatatgtgcgttagcacgggtcaatggtctagtt 437  Q
    |||||| || || |||||| | |||||||||||||||||||||||||||||    
T  34761551 tattaatttttttaaatgacacgtgcgttagcacgggtcaatggtctagtt 34761601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 387 - 437
Target Start/End: Original strand, 39878385 - 39878435
Alignment:
Q  387 tattaacttcttaaaatgatatgtgcgttagcacgggtcaatggtctagtt 437  Q
    |||||| || || |||||| | |||||||||||||||||||||||||||||    
T  39878385 tattaatttttttaaatgacacgtgcgttagcacgggtcaatggtctagtt 39878435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 400 - 437
Target Start/End: Complemental strand, 3607708 - 3607671
Alignment:
Q  400 aaatgatatgtgcgttagcacgggtcaatggtctagtt 437  Q
    |||||| | |||||||||||||||||||||||||||||    
T  3607708 aaatgacacgtgcgttagcacgggtcaatggtctagtt 3607671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 400 - 437
Target Start/End: Complemental strand, 20104864 - 20104827
Alignment:
Q  400 aaatgatatgtgcgttagcacgggtcaatggtctagtt 437  Q
    |||||| | |||||||||||||||||||||||||||||    
T  20104864 aaatgacacgtgcgttagcacgggtcaatggtctagtt 20104827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 387 - 436
Target Start/End: Original strand, 23184290 - 23184339
Alignment:
Q  387 tattaacttcttaaaatgatatgtgcgttagcacgggtcaatggtctagt 436  Q
    |||||| || || |||||| | ||||||||||||||||||||||||||||    
T  23184290 tattaatttttttaaatgacacgtgcgttagcacgggtcaatggtctagt 23184339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 387 - 436
Target Start/End: Original strand, 23188557 - 23188606
Alignment:
Q  387 tattaacttcttaaaatgatatgtgcgttagcacgggtcaatggtctagt 436  Q
    |||||| || || |||||| | ||||||||||||||||||||||||||||    
T  23188557 tattaatttttttaaatgacacgtgcgttagcacgggtcaatggtctagt 23188606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 400 - 437
Target Start/End: Complemental strand, 30090123 - 30090086
Alignment:
Q  400 aaatgatatgtgcgttagcacgggtcaatggtctagtt 437  Q
    |||||| | |||||||||||||||||||||||||||||    
T  30090123 aaatgacacgtgcgttagcacgggtcaatggtctagtt 30090086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 384 - 437
Target Start/End: Original strand, 32675211 - 32675264
Alignment:
Q  384 gaatattaacttcttaaaatgatatgtgcgttagcacgggtcaatggtctagtt 437  Q
    |||||||| ||| || |||||| | ||||||||||||||||| |||||||||||    
T  32675211 gaatattatcttttttaaatgacacgtgcgttagcacgggtctatggtctagtt 32675264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0642 (Bit Score: 184; Significance: 2e-99; HSPs: 3)
Name: scaffold0642
Description:

Target: scaffold0642; HSP #1
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 1 - 248
Target Start/End: Original strand, 2049 - 2295
Alignment:
Q  1 cccactagcatcattttcatgaacatgttactggtcgatgaaaaagtttctacatgtttgcactcttagctttaaaattaaactaatgtcatcgttgatt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| ||||||||||| |||| ||    
T  2049 cccactagcatcattttcatgaacatgttactggtcgatgaaaaggtttctgcatgtttgcactcttagctttaaaattagactaatgtcattgttgttt 2148  T
Q  101 tttagttatgtaatttaaccagttgtttactgatgttgttgtcgttaatagggtggacgtattcacgccacagctaaaaaagatttggtggcaaagttca 200  Q
    |||||||||||||||||||||| |||||| || |||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  2149 tttagttatgtaatttaaccagctgtttaatgttgttgttgtcgtcaatagggtggacgtattcacgccacagctagaaaagatttggtggcaaagttca 2248  T
Q  201 ggtccatgggtgaagaagggggtacatatcagcttgaaaatgcaattg 248  Q
    | | ||||| | ||||||| ||||||||||||||||||||||||||||    
T  2249 gct-catggttcaagaaggaggtacatatcagcttgaaaatgcaattg 2295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0642; HSP #2
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 260 - 387
Target Start/End: Original strand, 3489 - 3616
Alignment:
Q  260 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatat 359  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  3489 aatgtgtaggacttttttgtgtactattcattttcttatttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatgt 3588  T
Q  360 taaagtaacaggaactacgtactagaat 387  Q
    ||||||||||||||||||||||||||||    
T  3589 taaagtaacaggaactacgtactagaat 3616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0642; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 400 - 437
Target Start/End: Original strand, 3728 - 3765
Alignment:
Q  400 aaatgatatgtgcgttagcacgggtcaatggtctagtt 437  Q
    |||||| | |||||||||||||||||||||||||||||    
T  3728 aaatgacacgtgcgttagcacgggtcaatggtctagtt 3765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0105 (Bit Score: 184; Significance: 2e-99; HSPs: 3)
Name: scaffold0105
Description:

Target: scaffold0105; HSP #1
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 1 - 248
Target Start/End: Complemental strand, 27020 - 26774
Alignment:
Q  1 cccactagcatcattttcatgaacatgttactggtcgatgaaaaagtttctacatgtttgcactcttagctttaaaattaaactaatgtcatcgttgatt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| ||||||||||| |||| ||    
T  27020 cccactagcatcattttcatgaacatgttactggtcgatgaaaaggtttctgcatgtttgcactcttagctttaaaattagactaatgtcattgttgttt 26921  T
Q  101 tttagttatgtaatttaaccagttgtttactgatgttgttgtcgttaatagggtggacgtattcacgccacagctaaaaaagatttggtggcaaagttca 200  Q
    |||||||||||||||||||||| |||||| || |||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  26920 tttagttatgtaatttaaccagctgtttaatgttgttgttgtcgtcaatagggtggacgtattcacgccacagctagaaaagatttggtggcaaagttca 26821  T
Q  201 ggtccatgggtgaagaagggggtacatatcagcttgaaaatgcaattg 248  Q
    | | ||||| | ||||||| ||||||||||||||||||||||||||||    
T  26820 gct-catggttcaagaaggaggtacatatcagcttgaaaatgcaattg 26774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0105; HSP #2
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 260 - 387
Target Start/End: Complemental strand, 25580 - 25453
Alignment:
Q  260 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatat 359  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  25580 aatgtgtaggacttttttgtgtactattcattttcttatttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatgt 25481  T
Q  360 taaagtaacaggaactacgtactagaat 387  Q
    ||||||||||||||||||||||||||||    
T  25480 taaagtaacaggaactacgtactagaat 25453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0105; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 400 - 437
Target Start/End: Complemental strand, 25341 - 25304
Alignment:
Q  400 aaatgatatgtgcgttagcacgggtcaatggtctagtt 437  Q
    |||||| | |||||||||||||||||||||||||||||    
T  25341 aaatgacacgtgcgttagcacgggtcaatggtctagtt 25304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0345 (Bit Score: 181; Significance: 1e-97; HSPs: 3)
Name: scaffold0345
Description:

Target: scaffold0345; HSP #1
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 1 - 248
Target Start/End: Original strand, 11960 - 12207
Alignment:
Q  1 cccactagcatcattttcatgaacatgttactggtcgatgaaaaagtttctacatgtttgcactcttagctttaaaattaaactaatgtcatcgttgatt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| ||||||||||| |||| ||    
T  11960 cccactagcatcattttcatgaacatgttactggtcgatgaaaaggtttctgcatgtttgcactcttagctttaaaattagactaatgtcattgttgttt 12059  T
Q  101 tttagttatgtaatttaaccag-ttgtttactgatgttgttgtcgttaatagggtggacgtattcacgccacagctaaaaaagatttggtggcaaagttc 199  Q
    |||||||||||||||||||||| ||||||| || |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  12060 tttagttatgtaatttaaccagcttgtttaatgttgttgttgtcgtcaatagggtggacgtattcacgccacagctagaaaagatttggtggcaaagttc 12159  T
Q  200 aggtccatgggtgaagaagggggtacatatcagcttgaaaatgcaattg 248  Q
    || | ||||| | ||||||| ||||||||||||||||||||||||||||    
T  12160 agct-catggttcaagaaggaggtacatatcagcttgaaaatgcaattg 12207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0345; HSP #2
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 260 - 387
Target Start/End: Original strand, 13401 - 13528
Alignment:
Q  260 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatat 359  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  13401 aatgtgtaggacttttttgtgtactattcattttcttatttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatgt 13500  T
Q  360 taaagtaacaggaactacgtactagaat 387  Q
    ||||||||||||||||||||||||||||    
T  13501 taaagtaacaggaactacgtactagaat 13528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0345; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 400 - 437
Target Start/End: Original strand, 13640 - 13677
Alignment:
Q  400 aaatgatatgtgcgttagcacgggtcaatggtctagtt 437  Q
    |||||| | |||||||||||||||||||||||||||||    
T  13640 aaatgacacgtgcgttagcacgggtcaatggtctagtt 13677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 112; Significance: 2e-56; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 260 - 387
Target Start/End: Original strand, 45667 - 45794
Alignment:
Q  260 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatat 359  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| |    
T  45667 aatgtgtaggacttttttgtgtactgttcattttcttacttattgaaactatttgcatgtcaacgaacttcaatttccctttcaaaattatatgttattt 45766  T
Q  360 taaagtaacaggaactacgtactagaat 387  Q
    ||||||||||||||||||||||||||||    
T  45767 taaagtaacaggaactacgtactagaat 45794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 100; Significance: 3e-49; HSPs: 6)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 260 - 387
Target Start/End: Complemental strand, 51925 - 51799
Alignment:
Q  260 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatat 359  Q
    ||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| |    
T  51925 aatgtgtaggacttttt-gtgtactattcgttttcttacttattgaaactatttgcatgtcaacgaacttcaatttccctttcaaaattatatgttattt 51827  T
Q  360 taaagtaacaggaactacgtactagaat 387  Q
    |||||||||||||||||| |||||||||    
T  51826 taaagtaacaggaactacttactagaat 51799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097; HSP #2
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 260 - 387
Target Start/End: Complemental strand, 49103 - 48976
Alignment:
Q  260 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatat 359  Q
    ||||||||||| ||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||| |||||| || ||||||||||||||| |    
T  49103 aatgtgtaggaattttttgtgtactgttcattttcttacttattgaaactatttccatgtcaacgaacttcaatttcccattcaaaattatatgttattt 49004  T
Q  360 taaagtaacaggaactacgtactagaat 387  Q
    |||||||||||||||||| |||||||||    
T  49003 taaagtaacaggaactacctactagaat 48976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 260 - 334
Target Start/End: Complemental strand, 40453 - 40379
Alignment:
Q  260 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtt 334  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  40453 aatgtgtaggacttttttgggtactattcattttcttacttattgaaagtatttgcatgtcaacgaacttcagtt 40379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 384 - 437
Target Start/End: Complemental strand, 48880 - 48827
Alignment:
Q  384 gaatattaacttcttaaaatgatatgtgcgttagcacgggtcaatggtctagtt 437  Q
    |||||||| ||| || |||||| | |||||||||||||||||||||||||||||    
T  48880 gaatattatcttttttaaatgacacgtgcgttagcacgggtcaatggtctagtt 48827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 387 - 437
Target Start/End: Complemental strand, 40258 - 40208
Alignment:
Q  387 tattaacttcttaaaatgatatgtgcgttagcacgggtcaatggtctagtt 437  Q
    |||||| || || |||||| | |||||||||||||||||||||||||||||    
T  40258 tattaatttttttaaatgacacgtgcgttagcacgggtcaatggtctagtt 40208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097; HSP #6
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 384 - 436
Target Start/End: Complemental strand, 51704 - 51652
Alignment:
Q  384 gaatattaacttcttaaaatgatatgtgcgttagcacgggtcaatggtctagt 436  Q
    |||||||| ||| || |||||| | |||| |||||||||||||||||||||||    
T  51704 gaatattatcttttttaaatgacacgtgcattagcacgggtcaatggtctagt 51652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0374 (Bit Score: 95; Significance: 3e-46; HSPs: 2)
Name: scaffold0374
Description:

Target: scaffold0374; HSP #1
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 260 - 374
Target Start/End: Original strand, 2061 - 2175
Alignment:
Q  260 aatgtgtaggacttttttgtgtactattcattttcttacttattgaaactatttgcatgtcaacgaacttcagtttcccttttaaaattatatgttatat 359  Q
    ||||||||| |||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |    
T  2061 aatgtgtagcacttttttgtatactattcattttcttacttgttgaaactatttgcatgtcaacgaacttcagtttcccttttagaattatatgttatgt 2160  T
Q  360 taaagtaacaggaac 374  Q
    |||||||||||||||    
T  2161 taaagtaacaggaac 2175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0374; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 384 - 437
Target Start/End: Original strand, 2284 - 2337
Alignment:
Q  384 gaatattaacttcttaaaatgatatgtgcgttagcacgggtcaatggtctagtt 437  Q
    ||||||| ||||||||||||||   |||||||||||||||||||||||||||||    
T  2284 gaatatttacttcttaaaatgacccgtgcgttagcacgggtcaatggtctagtt 2337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0521 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0521
Description:

Target: scaffold0521; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 148 - 246
Target Start/End: Complemental strand, 135 - 37
Alignment:
Q  148 atagggtggacgtattcacgccacagctaaaaaagatttggtggcaaagttcaggtccatgggtgaagaagggggtacatatcagcttgaaaatgcaat 246  Q
    ||||||||||||||| ||| |||||| || ||| |||||||||||||  |||||||| |||| ||| ||||||| ||||||| ||||| | ||||||||    
T  135 atagggtggacgtatccactccacagttagaaaggatttggtggcaagattcaggtcaatggttgaggaaggggctacatatgagcttcacaatgcaat 37  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University