View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8403_low_11 (Length: 472)

Name: NF8403_low_11
Description: NF8403
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8403_low_11
NF8403_low_11
[»] chr2 (73 HSPs)
chr2 (16-241)||(5371167-5371392)
chr2 (16-233)||(18301195-18301412)
chr2 (16-205)||(12819443-12819632)
chr2 (16-234)||(20536937-20537156)
chr2 (71-233)||(6124399-6124561)
chr2 (71-233)||(4170259-4170416)
chr2 (71-233)||(22484478-22484641)
chr2 (71-231)||(6497409-6497563)
chr2 (349-457)||(7876714-7876822)
chr2 (349-457)||(16561800-16561908)
chr2 (349-457)||(38602332-38602440)
chr2 (71-205)||(40308582-40308715)
chr2 (349-457)||(4355325-4355433)
chr2 (349-457)||(14217164-14217272)
chr2 (125-233)||(16562022-16562130)
chr2 (349-457)||(33324818-33324926)
chr2 (155-233)||(22571163-22571241)
chr2 (349-458)||(22484266-22484375)
chr2 (349-457)||(4170512-4170620)
chr2 (349-457)||(7807384-7807492)
chr2 (349-457)||(18300972-18301080)
chr2 (349-457)||(40308907-40309015)
chr2 (348-457)||(28746661-28746770)
chr2 (349-458)||(34146179-34146288)
chr2 (148-230)||(33325046-33325128)
chr2 (148-230)||(38602133-38602215)
chr2 (125-214)||(7876946-7877035)
chr2 (349-457)||(1776446-1776554)
chr2 (349-457)||(6497659-6497767)
chr2 (349-458)||(22570936-22571045)
chr2 (349-457)||(6124173-6124281)
chr2 (348-457)||(24585530-24585638)
chr2 (349-457)||(2319275-2319383)
chr2 (371-457)||(1005513-1005598)
chr2 (349-451)||(8482927-8483029)
chr2 (349-457)||(4561788-4561896)
chr2 (360-455)||(37134319-37134414)
chr2 (16-69)||(14824381-14824434)
chr2 (349-457)||(20536775-20536873)
chr2 (349-458)||(35342316-35342425)
chr2 (360-449)||(35996651-35996740)
chr2 (349-458)||(44156596-44156705)
chr2 (349-457)||(31236196-31236304)
chr2 (385-457)||(45159344-45159416)
chr2 (16-75)||(31235987-31236046)
chr2 (16-73)||(2319535-2319592)
chr2 (288-333)||(5371075-5371120)
chr2 (370-458)||(21104481-21104569)
chr2 (348-457)||(43214572-43214683)
chr2 (16-75)||(6496961-6497019)
chr2 (16-75)||(22485039-22485097)
chr2 (16-75)||(34146438-34146497)
chr2 (16-75)||(40308126-40308184)
chr2 (17-75)||(4169811-4169868)
chr2 (16-69)||(4562031-4562084)
chr2 (16-69)||(8482740-8482793)
chr2 (397-457)||(3563851-3563911)
chr2 (16-64)||(4355559-4355607)
chr2 (17-61)||(24585785-24585829)
chr2 (16-71)||(45158977-45159032)
chr2 (16-70)||(35342580-35342634)
chr2 (23-69)||(44156840-44156886)
chr2 (16-61)||(1005762-1005807)
chr2 (27-75)||(6124943-6124991)
chr2 (27-75)||(7807155-7807203)
chr2 (393-457)||(14824148-14824212)
chr2 (349-437)||(40497395-40497483)
chr2 (356-457)||(5588107-5588208)
chr2 (29-75)||(10573752-10573798)
chr2 (288-330)||(20536889-20536931)
chr2 (16-62)||(28746484-28746530)
chr2 (16-69)||(5588280-5588333)
chr2 (397-449)||(3545639-3545691)
[»] chr3 (95 HSPs)
chr3 (16-241)||(22310935-22311160)
chr3 (16-233)||(28882367-28882584)
chr3 (16-231)||(35389965-35390180)
chr3 (16-234)||(50287034-50287251)
chr3 (16-205)||(52121404-52121592)
chr3 (71-233)||(48123036-48123199)
chr3 (71-233)||(10224895-10225057)
chr3 (71-233)||(28704949-28705111)
chr3 (71-233)||(52505567-52505729)
chr3 (71-233)||(1679442-1679604)
chr3 (71-233)||(42464677-42464839)
chr3 (349-457)||(35389750-35389858)
chr3 (86-215)||(25936819-25936948)
chr3 (349-457)||(28882688-28882796)
chr3 (125-233)||(53192701-53192809)
chr3 (349-457)||(7327712-7327820)
chr3 (349-457)||(40497330-40497438)
chr3 (349-457)||(52121180-52121288)
chr3 (349-458)||(13748457-13748566)
chr3 (348-457)||(42464916-42465025)
chr3 (349-457)||(1679708-1679816)
chr3 (349-457)||(37996821-37996929)
chr3 (148-233)||(45532805-45532890)
chr3 (349-457)||(48122825-48122933)
chr3 (349-458)||(22289731-22289840)
chr3 (349-457)||(22310705-22310813)
chr3 (349-457)||(52684201-52684309)
chr3 (349-457)||(55269026-55269130)
chr3 (349-451)||(25937074-25937176)
chr3 (349-458)||(30226419-30226528)
chr3 (349-449)||(983202-983302)
chr3 (349-457)||(6134392-6134500)
chr3 (17-75)||(30787363-30787421)
chr3 (360-457)||(38889101-38889197)
chr3 (349-457)||(53192498-53192596)
chr3 (349-457)||(28704727-28704835)
chr3 (349-457)||(52505843-52505950)
chr3 (16-71)||(13352996-13353051)
chr3 (349-456)||(28968511-28968618)
chr3 (349-457)||(10225172-10225269)
chr3 (359-457)||(29915861-29915959)
chr3 (359-457)||(29965014-29965112)
chr3 (349-457)||(22611394-22611492)
chr3 (350-415)||(33239992-33240057)
chr3 (401-457)||(19420905-19420961)
chr3 (349-457)||(21157739-21157847)
chr3 (349-457)||(30787572-30787680)
chr3 (349-457)||(41742082-41742190)
chr3 (349-457)||(42229674-42229782)
chr3 (16-75)||(22610565-22610623)
chr3 (16-75)||(25936367-25936425)
chr3 (349-457)||(2122704-2122815)
chr3 (19-75)||(19421674-19421730)
chr3 (349-457)||(45347299-45347405)
chr3 (386-457)||(19879140-19879211)
chr3 (16-71)||(21006164-21006219)
chr3 (16-75)||(37996579-37996637)
chr3 (16-75)||(45057102-45057161)
chr3 (16-75)||(52505112-52505170)
chr3 (397-451)||(2567445-2567499)
chr3 (349-457)||(1528502-1528600)
chr3 (349-458)||(7899729-7899838)
chr3 (16-69)||(19349427-19349480)
chr3 (16-73)||(20509957-20510014)
chr3 (22-75)||(21157535-21157588)
chr3 (16-69)||(42229906-42229959)
chr3 (397-458)||(47642016-47642077)
chr3 (16-61)||(48333212-48333257)
chr3 (16-61)||(48334155-48334200)
chr3 (27-75)||(1528805-1528853)
chr3 (385-449)||(13353232-13353296)
chr3 (349-417)||(45532990-45533058)
chr3 (16-75)||(7327996-7328054)
chr3 (16-71)||(19878903-19878958)
chr3 (16-75)||(22289544-22289603)
chr3 (16-75)||(45532351-45532409)
chr3 (371-446)||(47750922-47750997)
chr3 (16-71)||(52684589-52684644)
chr3 (15-61)||(28548296-28548342)
chr3 (349-457)||(25700762-25700868)
chr3 (288-333)||(35389871-35389916)
chr3 (370-447)||(39663968-39664045)
chr3 (27-75)||(38888897-38888945)
chr3 (28-75)||(1678980-1679027)
chr3 (16-75)||(10224448-10224506)
chr3 (16-70)||(7899520-7899574)
chr3 (397-447)||(49419245-49419295)
chr3 (288-330)||(52121304-52121346)
chr3 (16-69)||(29916034-29916087)
chr3 (16-69)||(29965187-29965240)
chr3 (288-333)||(33240071-33240116)
chr3 (360-421)||(45057253-45057314)
chr3 (16-61)||(47642278-47642323)
chr3 (385-457)||(19349636-19349708)
chr3 (421-457)||(33238723-33238759)
[»] chr7 (91 HSPs)
chr7 (16-233)||(19510725-19510942)
chr7 (16-233)||(16564042-16564258)
chr7 (16-233)||(16601404-16601620)
chr7 (17-241)||(8028901-8029125)
chr7 (16-233)||(26773382-26773602)
chr7 (16-168)||(1042869-1043021)
chr7 (16-201)||(4291799-4291987)
chr7 (71-233)||(40095869-40096031)
chr7 (71-233)||(39520982-39521144)
chr7 (73-233)||(36660680-36660838)
chr7 (71-233)||(11829912-11830069)
chr7 (349-457)||(1043081-1043189)
chr7 (349-457)||(25969394-25969502)
chr7 (349-457)||(34238155-34238263)
chr7 (349-457)||(27353918-27354026)
chr7 (349-457)||(40095647-40095755)
chr7 (349-457)||(11829686-11829794)
chr7 (349-457)||(26773722-26773830)
chr7 (125-233)||(26843779-26843887)
chr7 (349-457)||(38262996-38263104)
chr7 (349-457)||(48163405-48163513)
chr7 (349-446)||(9250432-9250529)
chr7 (148-233)||(27397865-27397950)
chr7 (349-457)||(27555379-27555487)
chr7 (349-458)||(34122627-34122736)
chr7 (158-233)||(34122430-34122505)
chr7 (349-458)||(27398057-27398166)
chr7 (349-457)||(16850783-16850891)
chr7 (125-214)||(34238385-34238474)
chr7 (349-457)||(19510520-19510628)
chr7 (359-446)||(11058360-11058447)
chr7 (17-75)||(23078911-23078969)
chr7 (148-210)||(38265010-38265072)
chr7 (148-214)||(42897208-42897274)
chr7 (349-458)||(35159861-35159970)
chr7 (358-454)||(23079059-23079155)
chr7 (349-449)||(26845906-26846006)
chr7 (349-457)||(33454067-33454175)
chr7 (349-457)||(44960145-44960253)
chr7 (370-457)||(4291509-4291596)
chr7 (16-75)||(11830459-11830517)
chr7 (349-457)||(39520797-39520894)
chr7 (349-457)||(42896999-42897096)
chr7 (16-69)||(23969949-23970002)
chr7 (16-69)||(48153784-48153837)
chr7 (15-75)||(27397406-27397465)
chr7 (349-457)||(38064592-38064700)
chr7 (16-75)||(19820799-19820858)
chr7 (386-457)||(47238654-47238725)
chr7 (370-448)||(48153620-48153698)
chr7 (16-69)||(21409629-21409682)
chr7 (16-69)||(26973296-26973349)
chr7 (16-73)||(33454327-33454384)
chr7 (397-458)||(36758054-36758115)
chr7 (397-458)||(36767578-36767639)
chr7 (349-413)||(8028738-8028802)
chr7 (349-457)||(21409388-21409496)
chr7 (349-452)||(36202798-36202891)
chr7 (16-75)||(47238039-47238098)
chr7 (16-75)||(48163699-48163757)
chr7 (397-457)||(16564416-16564476)
chr7 (397-457)||(16601186-16601246)
chr7 (16-75)||(1400069-1400128)
chr7 (16-75)||(27354212-27354270)
chr7 (16-75)||(27555135-27555193)
chr7 (16-75)||(36661235-36661293)
chr7 (16-69)||(24956490-24956541)
chr7 (288-330)||(36660598-36660640)
chr7 (16-73)||(38064927-38064985)
chr7 (24-69)||(554721-554766)
chr7 (288-333)||(4291619-4291664)
chr7 (349-457)||(24956247-24956356)
chr7 (16-69)||(36413609-36413661)
chr7 (397-457)||(554938-554998)
chr7 (15-71)||(9250111-9250167)
chr7 (15-71)||(9283661-9283717)
chr7 (349-381)||(16564389-16564421)
chr7 (349-381)||(16601241-16601273)
chr7 (27-75)||(16851074-16851122)
chr7 (15-71)||(25969766-25969822)
chr7 (359-451)||(44269729-44269820)
chr7 (16-64)||(44269986-44270034)
chr7 (16-64)||(35160128-35160180)
chr7 (16-70)||(15878225-15878279)
chr7 (16-75)||(36763592-36763655)
chr7 (288-333)||(1043023-1043068)
chr7 (359-456)||(18113959-18114055)
chr7 (385-458)||(35136055-35136128)
chr7 (358-390)||(15878374-15878406)
chr7 (358-390)||(23970076-23970108)
chr7 (27-75)||(40096429-40096477)
[»] scaffold0250 (3 HSPs)
scaffold0250 (17-241)||(5736-5960)
scaffold0250 (349-455)||(5514-5620)
scaffold0250 (288-333)||(5633-5678)
[»] chr5 (82 HSPs)
chr5 (16-241)||(10657046-10657275)
chr5 (16-225)||(5985766-5985974)
chr5 (71-233)||(1639526-1639688)
chr5 (71-233)||(33829973-33830135)
chr5 (71-233)||(12852322-12852484)
chr5 (71-233)||(26794737-26794899)
chr5 (71-233)||(30918564-30918726)
chr5 (71-228)||(9792518-9792670)
chr5 (348-457)||(10656820-10656929)
chr5 (125-233)||(7977451-7977559)
chr5 (349-457)||(30777532-30777640)
chr5 (349-457)||(32707841-32707949)
chr5 (125-233)||(32625097-32625205)
chr5 (349-457)||(39690773-39690881)
chr5 (348-457)||(30918378-30918487)
chr5 (349-457)||(1639792-1639900)
chr5 (349-457)||(33829753-33829861)
chr5 (349-455)||(11906220-11906326)
chr5 (155-233)||(41392533-41392611)
chr5 (349-457)||(1795392-1795500)
chr5 (349-449)||(22774562-22774662)
chr5 (148-230)||(32707644-32707726)
chr5 (349-458)||(41392722-41392831)
chr5 (349-457)||(9792319-9792427)
chr5 (349-457)||(30284617-30284725)
chr5 (349-455)||(26691618-26691724)
chr5 (349-455)||(26961350-26961456)
chr5 (349-457)||(26716273-26716381)
chr5 (349-457)||(26986013-26986121)
chr5 (350-457)||(32728720-32728827)
chr5 (359-447)||(15066148-15066236)
chr5 (349-457)||(32624877-32624985)
chr5 (125-202)||(39690267-39690344)
chr5 (348-448)||(14836390-14836490)
chr5 (349-456)||(17138264-17138370)
chr5 (16-75)||(22738095-22738154)
chr5 (16-75)||(26691875-26691934)
chr5 (16-75)||(26961607-26961666)
chr5 (349-457)||(26795014-26795111)
chr5 (18-75)||(15066449-15066506)
chr5 (349-458)||(21251464-21251573)
chr5 (349-457)||(5612452-5612560)
chr5 (349-441)||(5986078-5986170)
chr5 (397-457)||(12852119-12852179)
chr5 (15-75)||(27085607-27085667)
chr5 (16-75)||(3701322-3701381)
chr5 (16-75)||(17138055-17138114)
chr5 (360-418)||(9653804-9653862)
chr5 (16-69)||(1795635-1795688)
chr5 (349-458)||(3934798-3934907)
chr5 (16-69)||(26716515-26716568)
chr5 (16-69)||(26986255-26986308)
chr5 (27-75)||(12852882-12852930)
chr5 (349-457)||(6243179-6243276)
chr5 (24-66)||(7629291-7629333)
chr5 (359-457)||(35746271-35746369)
chr5 (16-69)||(3934610-3934663)
chr5 (22-75)||(5612248-5612301)
chr5 (16-61)||(21251734-21251779)
chr5 (16-69)||(27938401-27938454)
chr5 (348-457)||(34032369-34032478)
chr5 (359-448)||(41233388-41233477)
chr5 (16-69)||(43357582-43357635)
chr5 (16-75)||(39690019-39690077)
chr5 (349-415)||(1920878-1920944)
chr5 (27-72)||(1639088-1639133)
chr5 (409-458)||(7629069-7629118)
chr5 (16-69)||(14836574-14836627)
chr5 (30-75)||(18001781-18001826)
chr5 (16-69)||(25749848-25749901)
chr5 (27-75)||(9793068-9793116)
chr5 (15-71)||(30777210-30777266)
chr5 (16-71)||(11907553-11907608)
chr5 (16-75)||(26794290-26794348)
chr5 (288-330)||(1639735-1639777)
chr5 (349-451)||(5721993-5722095)
chr5 (23-73)||(5722237-5722287)
chr5 (16-58)||(30284408-30284450)
chr5 (358-403)||(27085418-27085463)
chr5 (29-70)||(34032625-34032666)
chr5 (359-407)||(21317208-21317256)
chr5 (386-450)||(27938170-27938234)
[»] chr6 (43 HSPs)
chr6 (16-234)||(32130346-32130564)
chr6 (16-205)||(31740503-31740692)
chr6 (71-233)||(1036560-1036722)
chr6 (86-233)||(7188539-7188686)
chr6 (349-457)||(1036836-1036944)
chr6 (349-457)||(3212477-3212585)
chr6 (148-233)||(8357171-8357256)
chr6 (349-447)||(31195879-31195977)
chr6 (349-457)||(27083985-27084093)
chr6 (349-457)||(234306-234414)
chr6 (288-457)||(32130611-32130777)
chr6 (349-458)||(8356957-8357066)
chr6 (360-448)||(32017986-32018074)
chr6 (349-457)||(7188789-7188894)
chr6 (371-457)||(26327155-26327241)
chr6 (16-74)||(10894320-10894378)
chr6 (349-458)||(19128152-19128261)
chr6 (349-457)||(25834506-25834614)
chr6 (360-457)||(3299141-3299238)
chr6 (349-458)||(13607795-13607904)
chr6 (16-69)||(19128395-19128448)
chr6 (16-61)||(22988927-22988972)
chr6 (16-61)||(23799424-23799469)
chr6 (349-457)||(6708051-6708159)
chr6 (359-451)||(13061325-13061417)
chr6 (16-75)||(7188067-7188125)
chr6 (16-75)||(31195639-31195697)
chr6 (16-69)||(234551-234604)
chr6 (397-457)||(31079612-31079672)
chr6 (18-69)||(27084216-27084267)
chr6 (16-73)||(6707841-6707899)
chr6 (30-75)||(13061189-13061234)
chr6 (24-73)||(26327555-26327604)
chr6 (27-75)||(1036114-1036162)
chr6 (15-71)||(3212831-3212887)
chr6 (16-71)||(7255183-7255239)
chr6 (370-458)||(11105285-11105373)
chr6 (359-415)||(22989354-22989410)
chr6 (359-415)||(23798987-23799043)
chr6 (16-75)||(8357651-8357709)
chr6 (392-457)||(10894626-10894690)
chr6 (385-450)||(31741202-31741267)
chr6 (16-64)||(11105556-11105604)
[»] chr1 (87 HSPs)
chr1 (16-233)||(31653103-31653318)
chr1 (17-233)||(13012678-13012894)
chr1 (16-233)||(14334372-14334588)
chr1 (16-233)||(43189857-43190074)
chr1 (21-195)||(37346648-37346822)
chr1 (71-233)||(8132382-8132544)
chr1 (71-233)||(6916608-6916770)
chr1 (71-233)||(38330649-38330811)
chr1 (71-233)||(52895447-52895609)
chr1 (70-233)||(30323929-30324091)
chr1 (71-233)||(3427072-3427234)
chr1 (71-233)||(25256825-25256987)
chr1 (71-233)||(28659052-28659212)
chr1 (71-233)||(5984396-5984558)
chr1 (349-458)||(37104119-37104228)
chr1 (349-457)||(6916884-6916992)
chr1 (349-457)||(20409564-20409672)
chr1 (349-457)||(37346858-37346966)
chr1 (349-457)||(38330427-38330535)
chr1 (349-457)||(52895723-52895831)
chr1 (349-457)||(1036459-1036567)
chr1 (349-457)||(1043227-1043335)
chr1 (349-457)||(28949251-28949359)
chr1 (349-456)||(5984228-5984335)
chr1 (348-457)||(9781642-9781751)
chr1 (349-457)||(8132183-8132291)
chr1 (349-457)||(13013002-13013110)
chr1 (349-457)||(31653412-31653520)
chr1 (349-457)||(43189655-43189763)
chr1 (148-230)||(1043455-1043537)
chr1 (349-455)||(30323717-30323823)
chr1 (349-457)||(3426848-3426956)
chr1 (125-205)||(20409318-20409398)
chr1 (349-457)||(38948732-38948840)
chr1 (358-457)||(2472873-2472972)
chr1 (349-448)||(28659310-28659409)
chr1 (349-457)||(25256616-25256724)
chr1 (349-447)||(29167957-29168055)
chr1 (359-457)||(34096572-34096670)
chr1 (155-209)||(38948974-38949028)
chr1 (125-202)||(28948745-28948822)
chr1 (349-457)||(3708289-3708397)
chr1 (349-457)||(34432393-34432501)
chr1 (349-458)||(10822401-10822511)
chr1 (349-457)||(2364677-2364785)
chr1 (16-64)||(9781889-9781937)
chr1 (349-449)||(14167092-14167192)
chr1 (16-75)||(25257376-25257434)
chr1 (358-457)||(29861801-29861900)
chr1 (349-455)||(40775997-40776103)
chr1 (27-75)||(30324479-30324527)
chr1 (15-75)||(32380880-32380940)
chr1 (16-72)||(47654925-47654981)
chr1 (349-457)||(48715235-48715343)
chr1 (16-75)||(5984946-5985004)
chr1 (359-458)||(15417452-15417551)
chr1 (16-71)||(24851732-24851787)
chr1 (16-71)||(28658692-28658746)
chr1 (16-75)||(36363344-36363402)
chr1 (16-75)||(36367468-36367526)
chr1 (29-71)||(3708100-3708142)
chr1 (16-69)||(9528667-9528720)
chr1 (16-69)||(10822636-10822689)
chr1 (16-69)||(29168189-29168242)
chr1 (349-457)||(36367712-36367810)
chr1 (359-443)||(9528859-9528943)
chr1 (15-75)||(24589923-24589983)
chr1 (17-69)||(34096377-34096429)
chr1 (27-75)||(37104410-37104458)
chr1 (348-450)||(10763668-10763768)
chr1 (16-75)||(28948497-28948555)
chr1 (18-69)||(34432240-34432291)
chr1 (16-75)||(36551642-36551701)
chr1 (349-406)||(14334211-14334268)
chr1 (16-69)||(29862039-29862092)
chr1 (27-75)||(3427616-3427664)
chr1 (27-75)||(6916162-6916210)
chr1 (16-64)||(10763900-10763948)
chr1 (27-75)||(38331209-38331257)
chr1 (397-433)||(47654706-47654742)
chr1 (28-75)||(2472736-2472783)
chr1 (349-455)||(32381069-32381175)
chr1 (349-455)||(41675999-41676105)
chr1 (288-333)||(13012944-13012989)
chr1 (24-64)||(14167316-14167356)
chr1 (409-457)||(24849364-24849412)
chr1 (27-75)||(52895001-52895049)
[»] chr8 (84 HSPs)
chr8 (16-248)||(6028689-6028920)
chr8 (16-225)||(19436473-19436682)
chr8 (16-225)||(19572622-19572831)
chr8 (16-233)||(19947663-19947880)
chr8 (23-233)||(42949282-42949492)
chr8 (16-205)||(25022391-25022584)
chr8 (16-241)||(32877657-32877885)
chr8 (71-233)||(4246139-4246301)
chr8 (71-233)||(34901115-34901277)
chr8 (71-233)||(45216966-45217128)
chr8 (71-233)||(43771438-43771600)
chr8 (71-231)||(28876311-28876471)
chr8 (71-233)||(5539632-5539794)
chr8 (71-231)||(36483649-36483804)
chr8 (349-457)||(6028487-6028595)
chr8 (349-457)||(32877437-32877545)
chr8 (349-457)||(22201347-22201455)
chr8 (71-231)||(37668795-37668949)
chr8 (349-457)||(34901392-34901500)
chr8 (349-457)||(36483435-36483543)
chr8 (349-455)||(19948006-19948112)
chr8 (352-457)||(2872923-2873028)
chr8 (71-183)||(32638681-32638793)
chr8 (349-457)||(32759373-32759481)
chr8 (349-457)||(16384617-16384725)
chr8 (349-457)||(13422208-13422316)
chr8 (125-233)||(13422424-13422532)
chr8 (349-457)||(25022125-25022233)
chr8 (349-457)||(28876576-28876684)
chr8 (148-233)||(16384840-16384925)
chr8 (349-457)||(4245940-4246048)
chr8 (349-457)||(43771714-43771822)
chr8 (349-457)||(45217230-45217338)
chr8 (148-233)||(2872730-2872815)
chr8 (349-457)||(12580563-12580671)
chr8 (349-457)||(27886190-27886298)
chr8 (349-457)||(27944848-27944956)
chr8 (349-457)||(37372259-37372367)
chr8 (348-434)||(30804754-30804840)
chr8 (71-191)||(12580272-12580387)
chr8 (349-457)||(29355623-29355731)
chr8 (359-452)||(5818331-5818424)
chr8 (349-457)||(37668582-37668690)
chr8 (16-75)||(12579826-12579884)
chr8 (16-75)||(27108996-27109055)
chr8 (16-75)||(32760125-32760183)
chr8 (16-75)||(36484194-36484252)
chr8 (175-233)||(12580390-12580448)
chr8 (375-457)||(19436274-19436356)
chr8 (375-457)||(19572423-19572505)
chr8 (349-458)||(32424919-32425029)
chr8 (349-458)||(32638876-32638975)
chr8 (349-407)||(42949180-42949238)
chr8 (370-455)||(32683-32768)
chr8 (15-75)||(32638503-32638562)
chr8 (16-75)||(28875855-28875913)
chr8 (16-75)||(45216510-45216568)
chr8 (16-69)||(3892206-3892259)
chr8 (381-458)||(7411635-7411712)
chr8 (364-457)||(27968103-27968196)
chr8 (364-457)||(28025089-28025182)
chr8 (349-457)||(38388667-38388775)
chr8 (16-75)||(5540192-5540250)
chr8 (16-71)||(8170907-8170962)
chr8 (348-458)||(23265648-23265758)
chr8 (288-330)||(32877561-32877603)
chr8 (17-75)||(43770995-43771052)
chr8 (16-69)||(32844-32897)
chr8 (385-458)||(12357888-12357960)
chr8 (385-458)||(12359016-12359088)
chr8 (22-71)||(40412805-40412854)
chr8 (27-75)||(4246699-4246747)
chr8 (359-451)||(20182380-20182471)
chr8 (16-64)||(20182636-20182684)
chr8 (27-75)||(22201118-22201166)
chr8 (27-75)||(34900669-34900717)
chr8 (27-75)||(37669339-37669387)
chr8 (15-62)||(5818153-5818200)
chr8 (360-457)||(3891962-3892059)
chr8 (386-451)||(5539441-5539505)
chr8 (413-458)||(28737254-28737299)
chr8 (16-61)||(38388939-38388984)
chr8 (197-241)||(25022333-25022377)
chr8 (15-75)||(29355876-29355936)
[»] chr4 (76 HSPs)
chr4 (16-233)||(5835043-5835260)
chr4 (71-233)||(3403318-3403480)
chr4 (16-168)||(28377174-28377327)
chr4 (71-233)||(8063841-8064003)
chr4 (86-233)||(14795219-14795366)
chr4 (86-233)||(5325472-5325619)
chr4 (71-230)||(41145828-41145987)
chr4 (71-233)||(52572407-52572564)
chr4 (71-233)||(53322552-53322714)
chr4 (71-226)||(31226557-31226712)
chr4 (349-458)||(8064119-8064228)
chr4 (349-456)||(19738698-19738805)
chr4 (288-457)||(5834830-5834996)
chr4 (349-458)||(5325731-5325840)
chr4 (349-457)||(52122879-52122987)
chr4 (349-457)||(28376996-28377104)
chr4 (349-457)||(53322337-53322445)
chr4 (349-457)||(41145612-41145720)
chr4 (359-458)||(40694069-40694168)
chr4 (148-230)||(52122682-52122764)
chr4 (349-447)||(52721274-52721372)
chr4 (349-457)||(42472579-42472687)
chr4 (125-214)||(19738930-19739019)
chr4 (125-214)||(42472375-42472464)
chr4 (349-458)||(36511944-36512053)
chr4 (358-458)||(1176980-1177080)
chr4 (349-458)||(2586335-2586444)
chr4 (17-109)||(43509725-43509813)
chr4 (349-457)||(38492279-38492377)
chr4 (16-73)||(55900949-55901006)
chr4 (397-457)||(14795023-14795083)
chr4 (358-446)||(44521996-44522084)
chr4 (16-75)||(42630279-42630338)
chr4 (16-75)||(44521847-44521906)
chr4 (383-457)||(10257700-10257774)
chr4 (349-451)||(46431943-46432045)
chr4 (363-457)||(47607110-47607203)
chr4 (16-69)||(1177219-1177272)
chr4 (360-448)||(27981905-27981993)
chr4 (16-75)||(53323111-53323169)
chr4 (17-71)||(39957950-39958004)
chr4 (358-455)||(51858834-51858931)
chr4 (349-457)||(3403595-3403693)
chr4 (349-458)||(17892247-17892356)
chr4 (16-69)||(40694312-40694365)
chr4 (376-457)||(51674858-51674939)
chr4 (16-65)||(51859041-51859090)
chr4 (349-458)||(55901149-55901258)
chr4 (17-69)||(31946051-31946102)
chr4 (397-449)||(31946263-31946315)
chr4 (349-457)||(37992543-37992651)
chr4 (15-71)||(52721616-52721672)
chr4 (16-75)||(3109106-3109165)
chr4 (16-75)||(3402862-3402920)
chr4 (16-75)||(14795779-14795837)
chr4 (16-75)||(38492050-38492108)
chr4 (16-75)||(41146376-41146434)
chr4 (383-458)||(44121886-44121961)
chr4 (16-70)||(24793532-24793586)
chr4 (16-61)||(31227126-31227170)
chr4 (16-69)||(36511756-36511809)
chr4 (16-69)||(47607343-47607396)
chr4 (21-65)||(258898-258942)
chr4 (370-458)||(3109336-3109424)
chr4 (27-75)||(8063395-8063443)
chr4 (15-75)||(17892506-17892566)
chr4 (16-71)||(24784634-24784689)
chr4 (16-71)||(24823577-24823632)
chr4 (16-75)||(36943927-36943986)
chr4 (18-69)||(51675031-51675082)
chr4 (288-330)||(14795126-14795168)
chr4 (349-447)||(21058843-21058941)
chr4 (16-61)||(2586588-2586633)
chr4 (16-69)||(14614746-14614799)
chr4 (16-57)||(52572975-52573015)
chr4 (349-381)||(14795078-14795110)
[»] scaffold0005 (6 HSPs)
scaffold0005 (86-233)||(44365-44512)
scaffold0005 (397-457)||(44648-44708)
scaffold0005 (16-75)||(43894-43952)
scaffold0005 (288-330)||(44563-44605)
scaffold0005 (16-69)||(202577-202630)
scaffold0005 (349-381)||(44621-44653)
[»] scaffold0060 (2 HSPs)
scaffold0060 (71-233)||(30181-30343)
scaffold0060 (349-457)||(30454-30562)
[»] scaffold0037 (3 HSPs)
scaffold0037 (71-233)||(27523-27690)
scaffold0037 (349-457)||(27801-27899)
scaffold0037 (34-75)||(27092-27133)
[»] scaffold0112 (3 HSPs)
scaffold0112 (72-233)||(41822-41983)
scaffold0112 (397-458)||(42123-42184)
scaffold0112 (16-75)||(41373-41431)
[»] scaffold0640 (2 HSPs)
scaffold0640 (349-457)||(8102-8210)
scaffold0640 (148-230)||(7900-7982)
[»] scaffold0177 (2 HSPs)
scaffold0177 (148-233)||(25363-25446)
scaffold0177 (349-457)||(25551-25648)
[»] scaffold0285 (1 HSPs)
scaffold0285 (359-455)||(13252-13348)
[»] scaffold0240 (1 HSPs)
scaffold0240 (359-457)||(10600-10698)
[»] scaffold0406 (1 HSPs)
scaffold0406 (349-381)||(13932-13964)


Alignment Details
Target: chr2 (Bit Score: 198; Significance: 1e-108; HSPs: 73)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 16 - 241
Target Start/End: Complemental strand, 5371392 - 5371167
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattatatccaaagtggagggcaaccattttggaagaaaaagttgaaacccta 115  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  5371392 caaaaggaacattgttagtgctatactatatcgatccaaaaaagaagcactatatccaaagtggaaggcaaccattttggaagaaaaagttgaaacccta 5371293  T
Q  116 attttttaaaaaggggaagatgaaattgtttatgtggtatggtgtgggtcgtactggcaccaaagaaagataaaggaaatgtatatatattatagtaata 215  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||    
T  5371292 attttttaaaaaggggaagatgaaattgtttatgtggtatggtgtgggtcgtactgacaccaaagaaagataaaggaaatgtatacatattatagtaata 5371193  T
Q  216 tgatgattttattcttatggtttttt 241  Q
    | ||||||||||||||||| ||||||    
T  5371192 taatgattttattcttatgttttttt 5371167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 170; E-Value: 5e-91
Query Start/End: Original strand, 16 - 233
Target Start/End: Complemental strand, 18301412 - 18301195
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattatatccaaagtggagggcaaccattttggaagaaaaagttgaaacccta 115  Q
    |||||||||||||| |||||||||| | ||||||||||||||||||||| | ||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  18301412 caaaaggaacattgctagtgctatattatatcgatccaaaaaagaagcactgtatccaaagtggaaggcgaccattttggaagaaaaagttgaaacccta 18301313  T
Q  116 attttttaaaaaggggaagatgaaattgtttatgtggtatggtgtgggtcgtactggcaccaaagaaagataaaggaaatgtatatatattatagtaata 215  Q
    |||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  18301312 attttttagaaaggggaagatgaaattgtttctgtggtatggtgtgggtcgtactggcaccaaagaaagataaaggaaatgtatatatattataataata 18301213  T
Q  216 tgatgattttattcttat 233  Q
    | ||| ||||||||||||    
T  18301212 taatgtttttattcttat 18301195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 16 - 205
Target Start/End: Complemental strand, 12819632 - 12819443
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattatatccaaagtggagggcaaccattttggaagaaaaagttgaaacccta 115  Q
    ||||||||| ||||||| ||||||||| ||||||||||||||||||||| ||||||||||||||| ||| ||||||||||||||||| ||||||||||||    
T  12819632 caaaaggaatattgttaatgctatactatatcgatccaaaaaagaagcactatatccaaagtggaaggcgaccattttggaagaaaaggttgaaacccta 12819533  T
Q  116 attttttaaaaaggggaagatgaaattgtttatgtggtatggtgtgggtcgtactggcaccaaagaaagataaaggaaatgtatatatat 205  Q
    ||||||||||||||||||||||||||||||| ||||||||| |||||||||||| ||||||||||||||||||| |||||||||||||||    
T  12819532 attttttaaaaaggggaagatgaaattgtttctgtggtatgatgtgggtcgtaccggcaccaaagaaagataaatgaaatgtatatatat 12819443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 16 - 234
Target Start/End: Complemental strand, 20537156 - 20536937
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaa--gcattatatccaaagtggagggcaaccattttggaagaaaaagttgaaaccc 113  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||  ||| ||||||||||||||| ||| ||||||||| || ||||| |||||||||    
T  20537156 caaaaggaacattgttagtgctatactatatcgatccaaaaaaaaaaagcactatatccaaagtggaaggcgaccattttgaaaaaaaaaattgaaaccc 20537057  T
Q  114 taattttttaaaaaggggaagatgaaattgtttatgtggtatggtgtgggtcgtactggcaccaaagaaagataaaggaaatgtatatatattatagtaa 213  Q
    |||||||||| |||||||||||||||||||||| | |||| ||||||||||||| ||| | |||||||||||||||||||||||||||||||||||||||    
T  20537056 taattttttagaaaggggaagatgaaattgtttgtttggtttggtgtgggtcgt-ctgtccccaaagaaagataaaggaaatgtatatatattatagtaa 20536958  T
Q  214 tatgatgattttattcttatg 234  Q
    ||| ||  |||||||||||||    
T  20536957 tataatatttttattcttatg 20536937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 71 - 233
Target Start/End: Complemental strand, 6124561 - 6124399
Alignment:
Q  71 ccaaagtggagggcaaccattttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaaattgtttatgtggtatggtgtgggtcgtact 170  Q
    ||||||||||  || |||| ||||||||||||||||||||||||||||| ||| |||||| |||||| ||||| || |||||| ||||||||||||||||    
T  6124561 ccaaagtggacagcgaccactttggaagaaaaagttgaaaccctaatttcttagaaagggaaagatgcaattggttgtgtggtgtggtgtgggtcgtact 6124462  T
Q  171 ggcaccaaagaaagataaaggaaatgtatatatattatagtaatatgatgattttattcttat 233  Q
    ||||||||||| ||||||||||||| |||||||||||||||||||| ||| ||||||||||||    
T  6124461 ggcaccaaagatagataaaggaaatatatatatattatagtaatataatgtttttattcttat 6124399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 71 - 233
Target Start/End: Original strand, 4170259 - 4170416
Alignment:
Q  71 ccaaagtggagggcaaccattttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaaattgtttatgtggtatggtgtgggtcgtact 170  Q
    |||||||||| ||| |||| ||||||||||||||||||||||||||||| ||| |||||| |||||| ||||||||     || ||||||||||||||||    
T  4170259 ccaaagtggacggcgaccactttggaagaaaaagttgaaaccctaatttcttagaaagggaaagatgcaattgttt-----gtgtggtgtgggtcgtact 4170353  T
Q  171 ggcaccaaagaaagataaaggaaatgtatatatattatagtaatatgatgattttattcttat 233  Q
    | |||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||    
T  4170354 gacaccaaagaaagataaaggaaatgtatatatattatagtaatataatgtttttattcttat 4170416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 71 - 233
Target Start/End: Complemental strand, 22484641 - 22484478
Alignment:
Q  71 ccaaagtggagggcaaccattttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaaattgt-ttatgtggtatggtgtgggtcgtac 169  Q
    |||||||||| ||  |||| |||||||||||||||||||||| |||||| |||  ||||| |||||| |||||  || |||||| |||||||||||||||    
T  22484641 ccaaagtggacggtgaccactttggaagaaaaagttgaaaccttaatttcttagtaagggaaagatgtaattgggttgtgtggtgtggtgtgggtcgtac 22484542  T
Q  170 tggcaccaaagaaagataaaggaaatgtatatatattatagtaatatgatgattttattcttat 233  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||| ||||    
T  22484541 tggcaccaaagaaagataaaggaaatgtatatatattatagtaatataatgtttttatttttat 22484478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 71 - 231
Target Start/End: Original strand, 6497409 - 6497563
Alignment:
Q  71 ccaaagtggagggcaaccattttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaaattgtttatgtggtatggtgtgggtcgtact 170  Q
    |||||||||| ||| |||| ||||||||||||||||||||||||||||| ||| |||||| |||||| |||| |||     || ||||||||||||||||    
T  6497409 ccaaagtggacggcgaccactttggaagaaaaagttgaaaccctaatttcttagaaagggaaagatgcaatttttt-----gtgtggtgtgggtcgtact 6497503  T
Q  171 ggcaccaaagaaagataaaggaaatgtatatatattatagtaatatgatgattttattctt 231  Q
    |||||||||||||||||||||||||||||||| ||||||||||||| ||| ||||| ||||    
T  6497504 ggcaccaaagaaagataaaggaaatgtatata-attatagtaatataatgtttttactctt 6497563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 349 - 457
Target Start/End: Complemental strand, 7876822 - 7876714
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    |||||||||||||||||||| |||||||||||| |||||||| |||| ||||||||||| |||||||||| ||||| |||||||||||| ||||||||||    
T  7876822 ttaatatttggatactctccggatacgtatcgggaagtatcgggcaggtatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatc 7876723  T
Q  449 ggggcttca 457  Q
    |||||||||    
T  7876722 ggggcttca 7876714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 349 - 457
Target Start/End: Complemental strand, 16561908 - 16561800
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    |||||||||||||||||||| |||||||||||| |||||||| |||| ||||||||||||||||||| || ||||| |||||||||||| ||||||||||    
T  16561908 ttaatatttggatactctccggatacgtatcgggaagtatcgggcaggtatcggtgcagaatacgcaagggatacggtacgtcatccattttgaagtatc 16561809  T
Q  449 ggggcttca 457  Q
    |||||||||    
T  16561808 ggggcttca 16561800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 349 - 457
Target Start/End: Original strand, 38602332 - 38602440
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    |||||||||||||||||||| |||||||||||| |||||||| |||| ||||||||||| |||||||||| ||||| |||||||||||| ||||||||||    
T  38602332 ttaatatttggatactctccggatacgtatcgggaagtatcgggcaggtatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatc 38602431  T
Q  449 ggggcttca 457  Q
    |||||||||    
T  38602432 ggggcttca 38602440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 71 - 205
Target Start/End: Original strand, 40308582 - 40308715
Alignment:
Q  71 ccaaagtggagggcaaccattttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaaattgtttatgtggtatggtgtgggtcgtact 170  Q
    |||||||||| ||| |||| ||||||||||||||||||||||||||||| ||| |||||  |||||| ||||| || |||| | ||||||||||||||||    
T  40308582 ccaaagtggacggcgaccactttggaagaaaaagttgaaaccctaatttcttagaaagga-aagatgcaattggttgtgtgatgtggtgtgggtcgtact 40308680  T
Q  171 ggcaccaaagaaagataaaggaaatgtatatatat 205  Q
    ||||| ||||||||||||||||||| |||||||||    
T  40308681 ggcactaaagaaagataaaggaaatatatatatat 40308715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 349 - 457
Target Start/End: Complemental strand, 4355433 - 4355325
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    ||||| |||| ||||||||| |||||||||||| ||||||| ||||| |||||||||||||||||||||| |||||||||||||||||| ||||||||||    
T  4355433 ttaatctttgcatactctcctgatacgtatcgggaagtatcaagcaggtatcggtgcagaatacgcagggaatacgatacgtcatccattttgaagtatc 4355334  T
Q  449 ggggcttca 457  Q
    | |||||||    
T  4355333 gaggcttca 4355325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 349 - 457
Target Start/End: Original strand, 14217164 - 14217272
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    ||||| ||| |||||||||| |||||||||||||||||||| | |||||||||||||||||||||||||| |||| ||||||||||||| ||||||||||    
T  14217164 ttaatctttagatactctccagatacgtatcggaaagtatcaaacagatatcggtgcagaatacgcaggggatacaatacgtcatccattttgaagtatc 14217263  T
Q  449 ggggcttca 457  Q
    || ||||||    
T  14217264 ggagcttca 14217272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 125 - 233
Target Start/End: Complemental strand, 16562130 - 16562022
Alignment:
Q  125 aaaggggaagatgaaattgtttatgtggtatggtgtgggtcgtactggcaccaaagaaagataaaggaaatgtatatatattatagtaatatgatgattt 224  Q
    |||||| |||||| ||||| || |||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| ||| |||    
T  16562130 aaagggaaagatgcaattggttgtgtggtgtggtgtgggtcgtactagcaccaaagaaagataaaggaaatgtatatatattataataatataatgtttt 16562031  T
Q  225 tattcttat 233  Q
    |||||||||    
T  16562030 tattcttat 16562022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 349 - 457
Target Start/End: Complemental strand, 33324926 - 33324818
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    |||||||||||||||||||| |||||||||||| |||||||| |||| ||||||||||| |||||||||| ||||| ||| |||||||| ||||||||||    
T  33324926 ttaatatttggatactctccggatacgtatcgggaagtatcgggcaggtatcggtgcaggatacgcaggggatacggtacatcatccattttgaagtatc 33324827  T
Q  449 ggggcttca 457  Q
    |||||||||    
T  33324826 ggggcttca 33324818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 155 - 233
Target Start/End: Complemental strand, 22571241 - 22571163
Alignment:
Q  155 tggtgtgggtcgtactggcaccaaagaaagataaaggaaatgtatatatattatagtaatatgatgattttattcttat 233  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||    
T  22571241 tggtgtgggtcgtactggcaccaaagaaagataaaggaaatgtatatatattatagtaatataatgtttttattcttat 22571163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 349 - 458
Target Start/End: Complemental strand, 22484375 - 22484266
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    |||||||||||||||||||| |||||||||||| ||||||||  ||||||||| ||||| |||||||||| ||||| ||| |||||||| ||||||||||    
T  22484375 ttaatatttggatactctccggatacgtatcgggaagtatcggacagatatcgatgcaggatacgcagggaatacggtacatcatccattttgaagtatc 22484276  T
Q  449 ggggcttcat 458  Q
    ||||||||||    
T  22484275 ggggcttcat 22484266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 349 - 457
Target Start/End: Original strand, 4170512 - 4170620
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    |||||||||||||||||||| |||||||||||| |||||||  |||| ||||||||||| |||||||||| ||||| |||||||||||| ||||||||||    
T  4170512 ttaatatttggatactctccggatacgtatcgggaagtatcaggcaggtatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatc 4170611  T
Q  449 ggggcttca 457  Q
    || ||||||    
T  4170612 ggagcttca 4170620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 349 - 457
Target Start/End: Original strand, 7807384 - 7807492
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    |||||||||||||||| ||| |||||||||||| ||||||||| ||| ||||||| ||  |||||||||| |||||||||||||||||| ||||||||||    
T  7807384 ttaatatttggatactttccggatacgtatcgggaagtatcgaacaggtatcggtacaagatacgcaggggatacgatacgtcatccattttgaagtatc 7807483  T
Q  449 ggggcttca 457  Q
    |||||||||    
T  7807484 ggggcttca 7807492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 349 - 457
Target Start/End: Complemental strand, 18301080 - 18300972
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    ||||||||||||||||||||||||||||||||  |||||||   ||| |||||||||||||||| ||||| |||||||||||||||||| ||||||||||    
T  18301080 ttaatatttggatactctcccgatacgtatcgagaagtatcagacaggtatcggtgcagaatacacaggggatacgatacgtcatccattttgaagtatc 18300981  T
Q  449 ggggcttca 457  Q
     ||||||||    
T  18300980 agggcttca 18300972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 349 - 457
Target Start/End: Original strand, 40308907 - 40309015
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    |||||||||||||||||||| |||||||||||| |||||||| |||| ||||||||||| ||||||| || ||||| ||||||||| || ||||||||||    
T  40308907 ttaatatttggatactctccggatacgtatcgggaagtatcgggcaggtatcggtgcaggatacgcatgggatacggtacgtcatctattttgaagtatc 40309006  T
Q  449 ggggcttca 457  Q
    |||||||||    
T  40309007 ggggcttca 40309015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 348 - 457
Target Start/End: Original strand, 28746661 - 28746770
Alignment:
Q  348 attaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtat 447  Q
    |||||| || ||||||||| | ||||||||||| ||||||||| |||| ||||||||||| |||||||||| ||||||||||||| |||| |||||||||    
T  28746661 attaatcttcggatactcttctgatacgtatcgaaaagtatcgggcaggtatcggtgcaggatacgcaggggatacgatacgtcaaccattttgaagtat 28746760  T
Q  448 cggggcttca 457  Q
    ||||||||||    
T  28746761 cggggcttca 28746770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 349 - 458
Target Start/End: Complemental strand, 34146288 - 34146179
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    ||||| |||||||||||||| |||||||||||| |||||||  |||||||||||||||||||||||||   |||||||||||||||||| || |||||||    
T  34146288 ttaatctttggatactctcctgatacgtatcgggaagtatcaggcagatatcggtgcagaatacgcagaagatacgatacgtcatccattttaaagtatc 34146189  T
Q  449 ggggcttcat 458  Q
    || |||||||    
T  34146188 ggagcttcat 34146179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 148 - 230
Target Start/End: Complemental strand, 33325128 - 33325046
Alignment:
Q  148 tgtggtatggtgtgggtcgtactggcaccaaagaaagataaaggaaatgtatatatattatagtaatatgatgattttattct 230  Q
    |||||| |||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| ||| |||||||||    
T  33325128 tgtggtgtggtgtgggtcgtactagcaccaaaaaaagataaaggaaatgtatatatattatagtaatataatgtttttattct 33325046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 148 - 230
Target Start/End: Original strand, 38602133 - 38602215
Alignment:
Q  148 tgtggtatggtgtgggtcgtactggcaccaaagaaagataaaggaaatgtatatatattatagtaatatgatgattttattct 230  Q
    |||||| |||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| ||| |||||||||    
T  38602133 tgtggtttggtgtgggtcgtactagcaccaaaaaaagataaaggaaatgtatatatattatagtaatataatgtttttattct 38602215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 125 - 214
Target Start/End: Complemental strand, 7877035 - 7876946
Alignment:
Q  125 aaaggggaagatgaaattgtttatgtggtatggtgtgggtcgtactggcaccaaagaaagataaaggaaatgtatatatattatagtaat 214  Q
    |||||| |||||| ||||| || |||||| ||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  7877035 aaagggaaagatgcaattggttgtgtggtgtggtgtgggtcgtacgggcaccaaagaaagataaagaaaatgtatatatattatagtaat 7876946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 349 - 457
Target Start/End: Original strand, 1776446 - 1776554
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    ||||| || ||||||||| | |||||||||||||||  |||| |||| ||||||||||||||||||| || ||||||||||||| |||| ||||||||||    
T  1776446 ttaatcttcggatactcttctgatacgtatcggaaatgatcgggcaggtatcggtgcagaatacgcaagggatacgatacgtcaaccattttgaagtatc 1776545  T
Q  449 ggggcttca 457  Q
    |||||||||    
T  1776546 ggggcttca 1776554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 349 - 457
Target Start/End: Original strand, 6497659 - 6497767
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    |||||||||||||||||||| |||||||||||| ||| |||   ||| ||||||||||| |||||||||| ||||| |||||||||||| ||||||||||    
T  6497659 ttaatatttggatactctccggatacgtatcgggaagaatcagacaggtatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatc 6497758  T
Q  449 ggggcttca 457  Q
    ||| |||||    
T  6497759 gggacttca 6497767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 349 - 458
Target Start/End: Complemental strand, 22571045 - 22570936
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    ||||||||||||||||| || |||||||||| | |||||||| |||| ||||||||||| |||||||| | ||||| ||||||||| || ||||||||||    
T  22571045 ttaatatttggatactccccggatacgtatcaggaagtatcgggcaggtatcggtgcaggatacgcagaggatacggtacgtcatctattttgaagtatc 22570946  T
Q  449 ggggcttcat 458  Q
     |||||||||    
T  22570945 tgggcttcat 22570936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 349 - 457
Target Start/End: Complemental strand, 6124281 - 6124173
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    |||||||||||||||||||| |||||||||| | ||||||||  ||  ||||||||||| |||| ||||| |||| ||||||||||||| || |||||||    
T  6124281 ttaatatttggatactctccggatacgtatcaggaagtatcggacatgtatcggtgcaggatacacaggggatacaatacgtcatccattttaaagtatc 6124182  T
Q  449 ggggcttca 457  Q
    |||||||||    
T  6124181 ggggcttca 6124173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 348 - 457
Target Start/End: Complemental strand, 24585638 - 24585530
Alignment:
Q  348 attaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtat 447  Q
    |||||| ||||||||| |||| |||||||||| | |||||||   ||| ||||||||||| |||||||||| ||||||||| |||||||| |||||||||    
T  24585638 attaatctttggatacactcctgatacgtatctggaagtatcagacaggtatcggtgcaggatacgcaggg-atacgatacatcatccattttgaagtat 24585540  T
Q  448 cggggcttca 457  Q
    ||||||||||    
T  24585539 cggggcttca 24585530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 349 - 457
Target Start/End: Complemental strand, 2319383 - 2319275
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    ||||| || ||||||||| | |||||||||| | ||||||| ||||  ||||||||||  |||||||||| |||||||||||||||||| ||||||||||    
T  2319383 ttaatcttcggatactcttctgatacgtatcaggaagtatcaagcaagtatcggtgcaagatacgcaggggatacgatacgtcatccattttgaagtatc 2319284  T
Q  449 ggggcttca 457  Q
    |||| ||||    
T  2319283 ggggtttca 2319275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 371 - 457
Target Start/End: Complemental strand, 1005598 - 1005513
Alignment:
Q  371 atacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatcggggcttca 457  Q
    ||||||||||| ||||||||| ||| ||||||||||| |||||||||| |||||||||||||||||| |||||||||| | ||||||    
T  1005598 atacgtatcgggaagtatcga-caggtatcggtgcaggatacgcaggggatacgatacgtcatccattttgaagtatcagagcttca 1005513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 349 - 451
Target Start/End: Original strand, 8482927 - 8483029
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    ||||| || ||||||||| | ||||||||||||||||||||   ||||||||||||||| |||||||  | |||||||||||||| ||| ||||||||||    
T  8482927 ttaatcttcggatactcttctgatacgtatcggaaagtatcagacagatatcggtgcaggatacgcaaaggatacgatacgtcattcattttgaagtatc 8483026  T
Q  449 ggg 451  Q
    |||    
T  8483027 ggg 8483029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 349 - 457
Target Start/End: Complemental strand, 4561896 - 4561788
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    ||||| || ||||||||| | |||| ||||||| |||||||| |||| ||||||||||| |||| || || |||||||||||||||||| |||||||||     
T  4561896 ttaatcttcggatactcttctgatatgtatcgggaagtatcgggcaggtatcggtgcaggatacacaaggaatacgatacgtcatccattttgaagtatt 4561797  T
Q  449 ggggcttca 457  Q
    || ||||||    
T  4561796 ggagcttca 4561788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 360 - 455
Target Start/End: Original strand, 37134319 - 37134414
Alignment:
Q  360 atactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatcggggctt 455  Q
    ||||||||  |||||||||||| ||||||| |||||||||| |||||| |||||||| | ||||| ||||||||| || |||||||||| ||||||    
T  37134319 atactctcttgatacgtatcgggaagtatcaagcagatatcagtgcaggatacgcagaggatacggtacgtcatctattttgaagtatctgggctt 37134414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 14824434 - 14824381
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattata 69  Q
    ||||| ||||||||||||||||||||| ||||||||||||||||||||||||||    
T  14824434 caaaaagaacattgttagtgctatactatatcgatccaaaaaagaagcattata 14824381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 349 - 457
Target Start/End: Complemental strand, 20536873 - 20536775
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    |||||||||||||||||| ||||||||||||||          |||  ||||||||||| ||| |||||| |||||||||||||||||| ||||||||||    
T  20536873 ttaatatttggatactcttccgatacgtatcgg----------gcaagtatcggtgcaggatatgcaggggatacgatacgtcatccattttgaagtatc 20536784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 349 - 458
Target Start/End: Complemental strand, 35342425 - 35342316
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    ||||| || |||||||||   |||||||||||| |||||||  | || ||||||||||| ||||||| || ||||| |||||||||||| ||||||||||    
T  35342425 ttaatcttcggatactcttttgatacgtatcgggaagtatcaggtaggtatcggtgcaggatacgcaagggatacggtacgtcatccattttgaagtatc 35342326  T
Q  449 ggggcttcat 458  Q
    ||| ||||||    
T  35342325 gggacttcat 35342316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 360 - 449
Target Start/End: Complemental strand, 35996740 - 35996651
Alignment:
Q  360 atactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatcg 449  Q
    ||||||||| ||||||||||| |||||||||| ||| ||||||||||  |||||||||| |||| |||| |||| ||| |||||||||||    
T  35996740 atactctcctgatacgtatcgaaaagtatcgaacaggtatcggtgcaagatacgcaggggatacaatacatcattcattttgaagtatcg 35996651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 349 - 458
Target Start/End: Complemental strand, 44156705 - 44156596
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    ||||| || ||||||||||| |||||||||||| |||||||   ||  ||||| ||||  |||||||||| |||||||| ||||||||| ||||||||||    
T  44156705 ttaatcttcggatactctcctgatacgtatcgggaagtatcagacatgtatcgatgcatgatacgcaggggatacgatatgtcatccattttgaagtatc 44156606  T
Q  449 ggggcttcat 458  Q
    |||| |||||    
T  44156605 ggggattcat 44156596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 349 - 457
Target Start/End: Original strand, 31236196 - 31236304
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    ||||| || ||||||||||| |||||||||||| || ||||  |||| | | ||||||| |||||||||| |||| |||||| |||||| || |||||||    
T  31236196 ttaatcttcggatactctcctgatacgtatcgggaaatatcatgcaggtgtgggtgcaggatacgcaggggatacaatacgttatccattttaaagtatc 31236295  T
Q  449 ggggcttca 457  Q
    |||||||||    
T  31236296 ggggcttca 31236304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 385 - 457
Target Start/End: Original strand, 45159344 - 45159416
Alignment:
Q  385 gtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatcggggcttca 457  Q
    |||||| |||||||| ||||||  ||||||| || |||||||||||||||||| |||||||||||||||||||    
T  45159344 gtatcgggcagatattggtgcaagatacgcaagggatacgatacgtcatccattttgaagtatcggggcttca 45159416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 16 - 75
Target Start/End: Original strand, 31235987 - 31236046
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattatatccaaa 75  Q
    |||||||||||||||||||| |||||| |||||||| |||||||||||| ||||||||||    
T  31235987 caaaaggaacattgttagtgttatactatatcgatctaaaaaagaagcactatatccaaa 31236046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 2319592 - 2319535
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattatatcca 73  Q
    |||||||||||||||||||| |||||| |||| |||||||||||||||| ||||||||    
T  2319592 caaaaggaacattgttagtgttatactatatcaatccaaaaaagaagcactatatcca 2319535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 288 - 333
Target Start/End: Complemental strand, 5371120 - 5371075
Alignment:
Q  288 cacaagtatccgtgtgtatcaggacgtatcggaaaattattttctt 333  Q
    |||||||||||||||||||| |||||||||||||||||||||||||    
T  5371120 cacaagtatccgtgtgtatcgggacgtatcggaaaattattttctt 5371075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 370 - 458
Target Start/End: Complemental strand, 21104569 - 21104481
Alignment:
Q  370 gatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatcggggcttcat 458  Q
    |||||||||||| || ||||   ||||||||||||||  |||||||| | |||||||||||||||||| || |||||| ||||||||||    
T  21104569 gatacgtatcgggaaatatcagacagatatcggtgcaagatacgcagaggatacgatacgtcatccattttaaagtattggggcttcat 21104481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 348 - 457
Target Start/End: Complemental strand, 43214683 - 43214572
Alignment:
Q  348 attaatatttggatactctcccgatac--gtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagt 445  Q
    |||||| || ||||||||||| ||||   ||||||| ||||||||  ||||||||| ||||| |||| || || |||||||||||||||||| |||||||    
T  43214683 attaatcttcggatactctcctgatatatgtatcgggaagtatcggtcagatatcgatgcaggatacacatgggatacgatacgtcatccattttgaagt 43214584  T
Q  446 atcggggcttca 457  Q
    ||| || |||||    
T  43214583 atctggacttca 43214572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 16 - 75
Target Start/End: Original strand, 6496961 - 6497019
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattatatccaaa 75  Q
    |||||||||| |||||||| ||||||| ||||||||||||||||||||| ||||||||||    
T  6496961 caaaaggaac-ttgttagtcctatactatatcgatccaaaaaagaagcactatatccaaa 6497019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 16 - 75
Target Start/End: Complemental strand, 22485097 - 22485039
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattatatccaaa 75  Q
    |||||||||| |||||||||||||||| |||||||||||||||||| || ||||||||||    
T  22485097 caaaaggaac-ttgttagtgctatactatatcgatccaaaaaagaatcactatatccaaa 22485039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 16 - 75
Target Start/End: Complemental strand, 34146497 - 34146438
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattatatccaaa 75  Q
    ||||||||||| ||||||||||||||| |||| ||| |||||| ||||||||||||||||    
T  34146497 caaaaggaacactgttagtgctatactatatcaatctaaaaaataagcattatatccaaa 34146438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 16 - 75
Target Start/End: Original strand, 40308126 - 40308184
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattatatccaaa 75  Q
    |||||||||| |||||||||||||||| |||||||||||||||||| || ||||||||||    
T  40308126 caaaaggaac-ttgttagtgctatactatatcgatccaaaaaagaatcactatatccaaa 40308184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 17 - 75
Target Start/End: Original strand, 4169811 - 4169868
Alignment:
Q  17 aaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattatatccaaa 75  Q
    ||||||||| ||||||||| |||||| |||||||||||||| |||||||||||||||||    
T  4169811 aaaaggaac-ttgttagtgttatactatatcgatccaaaaatgaagcattatatccaaa 4169868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 4562084 - 4562031
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattata 69  Q
    |||||||||||||||||||| |||||| |||| |||||||||||||||| ||||    
T  4562084 caaaaggaacattgttagtgatatactatatcaatccaaaaaagaagcactata 4562031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 16 - 69
Target Start/End: Original strand, 8482740 - 8482793
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattata 69  Q
    ||||||||||||||||| || |||| | ||||||||||||||||||||||||||    
T  8482740 caaaaggaacattgttaatgttatattatatcgatccaaaaaagaagcattata 8482793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 397 - 457
Target Start/End: Complemental strand, 3563911 - 3563851
Alignment:
Q  397 tatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatcggggcttca 457  Q
    |||| |||||||||| | |||| |||| ||||||||||||| |||||||||||||||||||    
T  3563911 tatcagtgcagaatatgtaggggatacaatacgtcatccattttgaagtatcggggcttca 3563851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 16 - 64
Target Start/End: Complemental strand, 4355607 - 4355559
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagca 64  Q
    |||||| ||||||||||||| |||||| |||||||||||||||||||||    
T  4355607 caaaagaaacattgttagtgttatactatatcgatccaaaaaagaagca 4355559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 24585829 - 24585785
Alignment:
Q  17 aaaaggaacattgttagtgctatactgtatcgatccaaaaaagaa 61  Q
    ||||| |||||||||||||||||||| ||||||||||||||||||    
T  24585829 aaaagaaacattgttagtgctatactatatcgatccaaaaaagaa 24585785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 71
Target Start/End: Original strand, 45158977 - 45159032
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattatatc 71  Q
    ||||| ||||||| ||||||||||||| |||||||| |||||||||||| ||||||    
T  45158977 caaaaagaacatttttagtgctatactatatcgatctaaaaaagaagcactatatc 45159032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 70
Target Start/End: Complemental strand, 35342634 - 35342580
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattatat 70  Q
    |||||||||||||||||||| |||||| |||||||| ||||||||| || |||||    
T  35342634 caaaaggaacattgttagtgttatactatatcgatctaaaaaagaaacactatat 35342580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 23 - 69
Target Start/End: Complemental strand, 44156886 - 44156840
Alignment:
Q  23 aacattgttagtgctatactgtatcgatccaaaaaagaagcattata 69  Q
    |||||||||||| ||||| | ||||||||||||||||||||||||||    
T  44156886 aacattgttagttctatattatatcgatccaaaaaagaagcattata 44156840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 16 - 61
Target Start/End: Complemental strand, 1005807 - 1005762
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaa 61  Q
    ||||||||| |||||||||| |||||| ||||||||||||||||||    
T  1005807 caaaaggaatattgttagtgttatactatatcgatccaaaaaagaa 1005762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 27 - 75
Target Start/End: Complemental strand, 6124991 - 6124943
Alignment:
Q  27 ttgttagtgctatactgtatcgatccaaaaaagaagcattatatccaaa 75  Q
    ||||||||| |||||| |||||||||||||||||| || ||||||||||    
T  6124991 ttgttagtgttatactatatcgatccaaaaaagaatcactatatccaaa 6124943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 27 - 75
Target Start/End: Original strand, 7807155 - 7807203
Alignment:
Q  27 ttgttagtgctatactgtatcgatccaaaaaagaagcattatatccaaa 75  Q
    ||||||||| |||||| |||||||||||||||||| || ||||||||||    
T  7807155 ttgttagtgttatactatatcgatccaaaaaagaatcactatatccaaa 7807203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 393 - 457
Target Start/End: Complemental strand, 14824212 - 14824148
Alignment:
Q  393 cagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatcggggcttca 457  Q
    ||||||||||||||  ||||||| |  ||||||||||||||| || ||||||||||||| |||||    
T  14824212 cagatatcggtgcatgatacgcaagagatacgatacgtcatctattttgaagtatcgggacttca 14824148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 349 - 437
Target Start/End: Original strand, 40497395 - 40497483
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccat 437  Q
    ||||| |||||||||||||| |||||||||||| |||||||   ||| ||||  ||||  |||||||||| ||| | ||||||||||||    
T  40497395 ttaatctttggatactctcctgatacgtatcgggaagtatcagacaggtatcactgcaagatacgcaggggataaggtacgtcatccat 40497483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 356 - 457
Target Start/End: Complemental strand, 5588208 - 5588107
Alignment:
Q  356 ttggatactctcccgatacgtatcggaaagtatcgag-cagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatcggggct 454  Q
    ||||||||||||  |||| ||||| | |||||| ||| ||| ||||||||||  ||||  || | |||||||||||||||||| |||||||||||| |||    
T  5588208 ttggatactctcatgatatgtatcaggaagtat-gagacaggtatcggtgcaagatacaaagaggatacgatacgtcatccattttgaagtatcggagct 5588110  T
Q  455 tca 457  Q
    |||    
T  5588109 tca 5588107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 29 - 75
Target Start/End: Complemental strand, 10573798 - 10573752
Alignment:
Q  29 gttagtgctatactgtatcgatccaaaaaagaagcattatatccaaa 75  Q
    ||||||| |||||| ||||||||||||||| ||||| ||||||||||    
T  10573798 gttagtgttatactttatcgatccaaaaaataagcactatatccaaa 10573752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 288 - 330
Target Start/End: Complemental strand, 20536931 - 20536889
Alignment:
Q  288 cacaagtatccgtgtgtatcaggacgtatcggaaaattatttt 330  Q
    |||||||||||||| ||||| |||||||||||||| |||||||    
T  20536931 cacaagtatccgtgcgtatcgggacgtatcggaaatttatttt 20536889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 16 - 62
Target Start/End: Original strand, 28746484 - 28746530
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaag 62  Q
    |||||| |||||||||| || |||||| |||||||||||||||||||    
T  28746484 caaaagaaacattgttattgttatactatatcgatccaaaaaagaag 28746530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 5588333 - 5588280
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattata 69  Q
    |||||| ||||||||||||| |||| | ||||||||||||||| ||||| ||||    
T  5588333 caaaagaaacattgttagtgttatattatatcgatccaaaaaataagcactata 5588280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 397 - 449
Target Start/End: Original strand, 3545639 - 3545691
Alignment:
Q  397 tatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatcg 449  Q
    ||||||||||||||||| |    |||||||||||||||||| |||||||||||    
T  3545639 tatcggtgcagaatacgtaaaagatacgatacgtcatccattttgaagtatcg 3545691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 178; Significance: 8e-96; HSPs: 95)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 178; E-Value: 8e-96
Query Start/End: Original strand, 16 - 241
Target Start/End: Complemental strand, 22311160 - 22310935
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattatatccaaagtggagggcaaccattttggaagaaaaagttgaaacccta 115  Q
    ||||||||||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||||| ||| ||||||||| ||||||||||||||||||||    
T  22311160 caaaaggaacattgttaatgctatactatatcgatccaaaaaagaagcactatatccaaagtggaaggcgaccattttgaaagaaaaagttgaaacccta 22311061  T
Q  116 attttttaaaaaggggaagatgaaattgtttatgtggtatggtgtgggtcgtactggcaccaaagaaagataaaggaaatgtatatatattatagtaata 215  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22311060 attttttaacaaggggaagatgaaattgtttctgtggtatggtgtgggtcgtactggcaccaaagaaagataaaggaaatgtatatatattatagtaata 22310961  T
Q  216 tgatgattttattcttatggtttttt 241  Q
    | ||| |||| |||||||| ||||||    
T  22310960 taatgttttttttcttatgttttttt 22310935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 16 - 233
Target Start/End: Original strand, 28882367 - 28882584
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattatatccaaagtggagggcaaccattttggaagaaaaagttgaaacccta 115  Q
    |||||| |||||||||| ||||||||| ||||||||  ||||||||||| ||||||||||||||| ||| |||| |||||||||||||||||||||||||    
T  28882367 caaaagaaacattgttaatgctatactatatcgatcataaaaagaagcactatatccaaagtggaaggcgaccactttggaagaaaaagttgaaacccta 28882466  T
Q  116 attttttaaaaaggggaagatgaaattgtttatgtggtatggtgtgggtcgtactggcaccaaagaaagataaaggaaatgtatatatattatagtaata 215  Q
    ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  28882467 attttttaaaaaggggaagatgaaattgtttttgtggtatagtgtgggtcgtactggcaccaaagaaagataaaagaaatgtatatatattatagtaata 28882566  T
Q  216 tgatgattttattcttat 233  Q
    | ||| ||||||||||||    
T  28882567 taatgtttttattcttat 28882584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 16 - 231
Target Start/End: Complemental strand, 35390180 - 35389965
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattatatccaaagtggagggcaaccattttggaagaaaaagttgaaacccta 115  Q
    ||||||||||||||||| || |||||| ||||||||||||||||||||| ||||||||||||||| ||| |||||||| ||| |||||||||||||||||    
T  35390180 caaaaggaacattgttaatgttatactatatcgatccaaaaaagaagcactatatccaaagtggaaggcgaccattttagaaaaaaaagttgaaacccta 35390081  T
Q  116 attttttaaaaaggggaagatgaaattgtttatgtggtatggtgtgggtcgtactggcaccaaagaaagataaaggaaatgtatatatattatagtaata 215  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  35390080 attttttaaaatggggaagatgaaattgtttctgtggtatggtgtggatcgtactcgcaccaaagaaagataaaggaaatgtatatatattatagtaata 35389981  T
Q  216 tgatgattttattctt 231  Q
    | ||| ||||||||||    
T  35389980 taatgtttttattctt 35389965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 16 - 234
Target Start/End: Original strand, 50287034 - 50287251
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattatatccaaagtggagggcaaccattttggaagaaaaagttgaaacccta 115  Q
    ||||||||||||| ||  ||||||||| |||||||||||||||||| || ||||||||||||||  ||| |||||||||||||||||||||||||| |||    
T  50287034 caaaaggaacattattgatgctatactatatcgatccaaaaaagaaacactatatccaaagtggcaggcgaccattttggaagaaaaagttgaaactcta 50287133  T
Q  116 attttttaaaaaggggaagatgaaattgtttatgtggtatggtgtgggtcgtactggcaccaaagaaagataaaggaaatgtatatatattatagtaata 215  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  50287134 attttttaaaaagggaaagatgaaattgtttttgtggtatggtgtgggtcgtact-gcaccaaagaaagataaaggaaatgtatatatattatagtaata 50287232  T
Q  216 tgatgattttattcttatg 234  Q
    | ||| |||||||||||||    
T  50287233 taatgtttttattcttatg 50287251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 16 - 205
Target Start/End: Complemental strand, 52121592 - 52121404
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattatatccaaagtggagggcaaccattttggaagaaaaagttgaaacccta 115  Q
    ||||||||||||||||||||||||| | |||||||||||||||  |||| ||||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  52121592 caaaaggaacattgttagtgctatattatatcgatccaaaaaaagagcactatatccaaagtggaaggcgaccattttggaagaaaaagttgaaacccta 52121493  T
Q  116 attttttaaaaaggggaagatgaaattgtttatgtggtatggtgtgggtcgtactggcaccaaagaaagataaaggaaatgtatatatat 205  Q
    |||||||| |||||||||||||||||||||| | ||| ||| ||| ||||||||| | |||||||||||||||||||||| |||||||||    
T  52121492 attttttagaaaggggaagatgaaattgtttctatgg-atgatgttggtcgtactagaaccaaagaaagataaaggaaatatatatatat 52121404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 71 - 233
Target Start/End: Complemental strand, 48123199 - 48123036
Alignment:
Q  71 ccaaagtggagggcaaccattttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaaattgtttatgtggtatggtgtgggtcgtact 170  Q
    |||||||||| ||| |||| ||||||||||||||||||||||||||||| ||| |||||| |||||| ||||| || |||||||||||||||||||||||    
T  48123199 ccaaagtggacggcgaccactttggaagaaaaagttgaaaccctaatttcttagaaagggaaagatgcaattggttgtgtggtatggtgtgggtcgtact 48123100  T
Q  171 -ggcaccaaagaaagataaaggaaatgtatatatattatagtaatatgatgattttattcttat 233  Q
      ||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||    
T  48123099 aagcaccaaagaaagataaaggaaatgtatatatattatagtaatataatgtttttattcttat 48123036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 71 - 233
Target Start/End: Original strand, 10224895 - 10225057
Alignment:
Q  71 ccaaagtggagggcaaccattttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaaattgtttatgtggtatggtgtgggtcgtact 170  Q
    |||||||||| ||| |||| ||||||||||||||||||||||||||||| ||| |||||| |||||| ||||| || |||||| ||||||||||||||||    
T  10224895 ccaaagtggacggcgaccactttggaagaaaaagttgaaaccctaatttcttagaaagggaaagatgcaattggttgtgtggtttggtgtgggtcgtact 10224994  T
Q  171 ggcaccaaagaaagataaaggaaatgtatatatattatagtaatatgatgattttattcttat 233  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||| ||| ||||||||||||    
T  10224995 ggcaccaaataaagataaaagaaatgtatatatattatagtaatataatgtttttattcttat 10225057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 71 - 233
Target Start/End: Complemental strand, 28705111 - 28704949
Alignment:
Q  71 ccaaagtggagggcaaccattttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaaattgtttatgtggtatggtgtgggtcgtact 170  Q
    |||||||||| ||| |||| ||||||||||||||||||||||||||||| ||| ||| || |||||| ||||| || |||| | ||||||||||||||||    
T  28705111 ccaaagtggacggcgaccactttggaagaaaaagttgaaaccctaatttcttagaaaaggaaagatgcaattggttgtgtgatgtggtgtgggtcgtact 28705012  T
Q  171 ggcaccaaagaaagataaaggaaatgtatatatattatagtaatatgatgattttattcttat 233  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||    
T  28705011 ggcaccaaagaaagataaaggaaatgtatatatattatagtaatataatgtttttattcttat 28704949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 71 - 233
Target Start/End: Original strand, 52505567 - 52505729
Alignment:
Q  71 ccaaagtggagggcaaccattttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaaattgtttatgtggtatggtgtgggtcgtact 170  Q
    |||||||||| ||  |||| ||||||||||||||||||||||||||||| |||  ||||| |||||| ||||| || |||||| ||||||||||||||||    
T  52505567 ccaaagtggacggtgaccactttggaagaaaaagttgaaaccctaatttcttagtaagggaaagatgcaattggttgtgtggtgtggtgtgggtcgtact 52505666  T
Q  171 ggcaccaaagaaagataaaggaaatgtatatatattatagtaatatgatgattttattcttat 233  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||    
T  52505667 ggcaccaaagaaagataaaggaaatgtatatatattatagtaatataatgtttttattcttat 52505729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 71 - 233
Target Start/End: Original strand, 1679442 - 1679604
Alignment:
Q  71 ccaaagtggagggcaaccattttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaaattgtttatgtggtatggtgtgggtcgtact 170  Q
    |||||||||| ||| | || ||||||||||||||||| ||||||||||| ||| |||||| |||||| ||||| ||  ||||| ||||||||||||||||    
T  1679442 ccaaagtggacggcgatcactttggaagaaaaagttggaaccctaatttcttagaaagggaaagatgcaattggttgggtggtgtggtgtgggtcgtact 1679541  T
Q  171 ggcaccaaagaaagataaaggaaatgtatatatattatagtaatatgatgattttattcttat 233  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||    
T  1679542 ggcaccaaagaaagataaaggaaatgtatatatattatagtaatataatgtttttattcttat 1679604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 71 - 233
Target Start/End: Original strand, 42464677 - 42464839
Alignment:
Q  71 ccaaagtggagggcaaccattttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaaattgtttatgtggtatggtgtgggtcgtact 170  Q
    |||||||||| ||| |||| || |||||||||||||||||||||||||| ||| |||||| |||||  ||||| || |||||| ||||||||||||||||    
T  42464677 ccaaagtggacggcgaccacttaggaagaaaaagttgaaaccctaatttcttagaaagggaaagatccaattggttgtgtggtgtggtgtgggtcgtact 42464776  T
Q  171 ggcaccaaagaaagataaaggaaatgtatatatattatagtaatatgatgattttattcttat 233  Q
    ||||||||||||||||||| |||||||||||||||||||||||||| ||  ||||||||||||    
T  42464777 ggcaccaaagaaagataaaagaaatgtatatatattatagtaatataatatttttattcttat 42464839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 349 - 457
Target Start/End: Complemental strand, 35389858 - 35389750
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||| ||||||||||| |||||||||| ||||| |||||||||||| ||||||||||    
T  35389858 ttaatatttggatactctcccgatacgtatcgggaagtatcgggcaggtatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatc 35389759  T
Q  449 ggggcttca 457  Q
    |||||||||    
T  35389758 ggggcttca 35389750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 86 - 215
Target Start/End: Original strand, 25936819 - 25936948
Alignment:
Q  86 accattttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaaattgtttatgtggtatggtgtgggtcgtactggcaccaaagaaaga 185  Q
    |||| |||| || ||||||||||||||||||||| ||| |||||| |||||| ||||||||||||||| || ||||||||||||| ||||||||||  ||    
T  25936819 accactttgaaataaaaagttgaaaccctaatttcttagaaagggaaagatgcaattgtttatgtggtgtgatgtgggtcgtactagcaccaaagatgga 25936918  T
Q  186 taaaggaaatgtatatatattatagtaata 215  Q
    ||||||||||||||||||||||||| ||||    
T  25936919 taaaggaaatgtatatatattatagcaata 25936948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 349 - 457
Target Start/End: Original strand, 28882688 - 28882796
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||  |||||||||| ||||| |||||||||||| ||||||||||    
T  28882688 ttaatatttggatactctcccgatacgtatcggaaagtatcgggcatatatcggtgcatgatacgcaggggatacggtacgtcatccattttgaagtatc 28882787  T
Q  449 ggggcttca 457  Q
    || ||||||    
T  28882788 ggagcttca 28882796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 125 - 233
Target Start/End: Complemental strand, 53192809 - 53192701
Alignment:
Q  125 aaaggggaagatgaaattgtttatgtggtatggtgtgggtcgtactggcaccaaagaaagataaaggaaatgtatatatattatagtaatatgatgattt 224  Q
    |||||| |||||| ||||| || |||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| |||    
T  53192809 aaagggaaagatgcaattggttgtgtggtgtggtgtgggtcgtacgggcaccaaagaaagataaaggaaatgtatatatattatagtaatataatgtttt 53192710  T
Q  225 tattcttat 233  Q
    |||||||||    
T  53192709 tattcttat 53192701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 349 - 457
Target Start/End: Complemental strand, 7327820 - 7327712
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    |||||||||||||||| ||| |||||||||||| |||||||| |||| ||||||||||| |||||||||| ||||| |||||||||||| ||||||||||    
T  7327820 ttaatatttggatactatccggatacgtatcgggaagtatcgggcaggtatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatc 7327721  T
Q  449 ggggcttca 457  Q
    |||||||||    
T  7327720 ggggcttca 7327712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 349 - 457
Target Start/End: Complemental strand, 40497438 - 40497330
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    |||||||||||||||||||| |||||||||||| |||||||| |||  ||||||||||| |||||||||| ||||| |||||||||||| ||||||||||    
T  40497438 ttaatatttggatactctccggatacgtatcgggaagtatcgggcaagtatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatc 40497339  T
Q  449 ggggcttca 457  Q
    |||||||||    
T  40497338 ggggcttca 40497330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 349 - 457
Target Start/End: Complemental strand, 52121288 - 52121180
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    ||||||||||||||||||||||||||||||||  ||||||||  ||| |||  |||||| |||||||||| |||||||||||||||||| ||||||||||    
T  52121288 ttaatatttggatactctcccgatacgtatcgagaagtatcggacaggtattagtgcaggatacgcaggggatacgatacgtcatccattttgaagtatc 52121189  T
Q  449 ggggcttca 457  Q
    |||||||||    
T  52121188 ggggcttca 52121180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 349 - 458
Target Start/End: Original strand, 13748457 - 13748566
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    ||||| || ||||||||| | ||||||||||||||||||||| |||| ||||||||||| |||||||| | ||||||||||||| |||| ||||||||||    
T  13748457 ttaatcttcggatactcttctgatacgtatcggaaagtatcgggcaggtatcggtgcaggatacgcagaggatacgatacgtcaaccattttgaagtatc 13748556  T
Q  449 ggggcttcat 458  Q
    ||||||||||    
T  13748557 ggggcttcat 13748566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 348 - 457
Target Start/End: Original strand, 42464916 - 42465025
Alignment:
Q  348 attaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtat 447  Q
    ||||||||||||||||||| | |||||||||||| |||||||| |||| ||||||||||| |||||||| | ||||  |||||||||||| |||||||||    
T  42464916 attaatatttggatactcttcggatacgtatcgggaagtatcgggcaggtatcggtgcaggatacgcagaggatacagtacgtcatccattttgaagtat 42465015  T
Q  448 cggggcttca 457  Q
    ||||||||||    
T  42465016 cggggcttca 42465025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 349 - 457
Target Start/End: Original strand, 1679708 - 1679816
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    |||||||||||||||||||| |||||||||||| |||||||| |||| ||||||||||| ||| |||| | ||||| ||||| |||||| ||||||||||    
T  1679708 ttaatatttggatactctccggatacgtatcgggaagtatcgggcaggtatcggtgcaggatatgcagtggatacggtacgttatccattttgaagtatc 1679807  T
Q  449 ggggcttca 457  Q
    |||||||||    
T  1679808 ggggcttca 1679816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 349 - 457
Target Start/End: Original strand, 37996821 - 37996929
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    |||||||||||||||||||| |||||||||||| || ||||| |||| | ||||||||| |||||||||| ||||| |||||||||||| || |||||||    
T  37996821 ttaatatttggatactctccggatacgtatcgggaaatatcgggcaggtctcggtgcaggatacgcaggggatacggtacgtcatccattttaaagtatc 37996920  T
Q  449 ggggcttca 457  Q
    |||||||||    
T  37996921 ggggcttca 37996929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 148 - 233
Target Start/End: Original strand, 45532805 - 45532890
Alignment:
Q  148 tgtggtatggtgtgggtcgtactggcaccaaagaaagataaaggaaatgtatatatattatagtaatatgatgattttattcttat 233  Q
    |||||| |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||    
T  45532805 tgtggtgtggtgtgactcgtactggcaccaaagaaagataaaggaaatgtatatatattatagtaatataatatttttattcttat 45532890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 349 - 457
Target Start/End: Complemental strand, 48122933 - 48122825
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    |||||||||||||||||||  |||||||||||| || ||||| |||  ||||||||||| ||| |||||| ||||| |||||||||||| ||||||||||    
T  48122933 ttaatatttggatactctctggatacgtatcgggaaatatcgggcatgtatcggtgcaggatatgcaggggatacggtacgtcatccattttgaagtatc 48122834  T
Q  449 ggggcttca 457  Q
    |||||||||    
T  48122833 ggggcttca 48122825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 349 - 458
Target Start/End: Original strand, 22289731 - 22289840
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    ||||| || ||||||||||| |||||||||| | |||||||  |||| ||| ||||||| |||||||||| |||||||||||||||||| ||||||||||    
T  22289731 ttaatcttcggatactctcctgatacgtatcaggaagtatcatgcaggtattggtgcaggatacgcaggggatacgatacgtcatccattttgaagtatc 22289830  T
Q  449 ggggcttcat 458  Q
    | ||||||||    
T  22289831 gaggcttcat 22289840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 349 - 457
Target Start/End: Complemental strand, 22310813 - 22310705
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    ||||||||| ||||||||  ||||||||||||| |||||||  |||| ||||||||||| |||| ||||| ||||| ||||||||||||  |||||||||    
T  22310813 ttaatattttgatactctatcgatacgtatcgggaagtatcaggcaggtatcggtgcaggatacacaggggatacggtacgtcatccattgtgaagtatc 22310714  T
Q  449 ggggcttca 457  Q
    |||||||||    
T  22310713 ggggcttca 22310705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 349 - 457
Target Start/End: Complemental strand, 52684309 - 52684201
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    |||||||| |||||||||||  ||||||||||||||||||||  ||| ||||||||||| ||||||| |  ||||||||||||||| || ||||||||||    
T  52684309 ttaatattcggatactctcctaatacgtatcggaaagtatcggacaggtatcggtgcaggatacgcatgagatacgatacgtcatctattttgaagtatc 52684210  T
Q  449 ggggcttca 457  Q
    || ||||||    
T  52684209 ggagcttca 52684201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 349 - 457
Target Start/End: Original strand, 55269026 - 55269130
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    ||||| || ||||||||||| |||||||||||| |||||||    || ||||| ||||| |||||||||| |||||||||||||||||| ||||||||||    
T  55269026 ttaatcttcggatactctcctgatacgtatcgggaagtatc----aggtatcgatgcaggatacgcaggggatacgatacgtcatccattttgaagtatc 55269121  T
Q  449 ggggcttca 457  Q
    |||||||||    
T  55269122 ggggcttca 55269130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 349 - 451
Target Start/End: Original strand, 25937074 - 25937176
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    ||||||||| |||||||||| ||||||||||||||||||||| |||  ||| |||| || |||||||||  |||||||||||||||||| || |||||||    
T  25937074 ttaatatttagatactctccagatacgtatcggaaagtatcgggcatgtattggtgtaggatacgcaggagatacgatacgtcatccattttaaagtatc 25937173  T
Q  449 ggg 451  Q
    |||    
T  25937174 ggg 25937176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 349 - 458
Target Start/End: Complemental strand, 30226528 - 30226419
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    ||||| || ||||||||||  |||||||||| |||||||||| |||| ||||||||||| |||||||| | |||||||| ||||||||| |||||||||     
T  30226528 ttaatcttcggatactctcttgatacgtatcagaaagtatcgggcaggtatcggtgcaggatacgcagaggatacgataagtcatccattttgaagtata 30226429  T
Q  449 ggggcttcat 458  Q
     |||||||||    
T  30226428 tgggcttcat 30226419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 349 - 449
Target Start/End: Complemental strand, 983302 - 983202
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    ||||| |||||||||||||| |||||||||||| |||||||   |||||||| ||||| ||||| ||||| |||||||||||||||||| ||||| ||||    
T  983302 ttaatctttggatactctcctgatacgtatcgggaagtatcagacagatatcagtgcaaaatacacaggggatacgatacgtcatccattttgaattatc 983203  T
Q  449 g 449  Q
    |    
T  983202 g 983202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 349 - 457
Target Start/End: Original strand, 6134392 - 6134500
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    ||||| || ||||||||||| ||||| |||||| |||||||  | |  ||||||||||| |||||||||| |||||||||||||||||| ||||||||||    
T  6134392 ttaatcttcggatactctcctgatacatatcgggaagtatcaggtatgtatcggtgcaggatacgcaggggatacgatacgtcatccattttgaagtatc 6134491  T
Q  449 ggggcttca 457  Q
     ||||||||    
T  6134492 agggcttca 6134500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 17 - 75
Target Start/End: Original strand, 30787363 - 30787421
Alignment:
Q  17 aaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattatatccaaa 75  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  30787363 aaaaggaacattgttagtgctatactatatcgatccaaaaaagaagcactatatccaaa 30787421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 360 - 457
Target Start/End: Original strand, 38889101 - 38889197
Alignment:
Q  360 atactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatcggggcttca 457  Q
    ||||||||| ||||||||||||||| ||||  |||||||||||||||| || || || | |||||||||||||||||| |||||||||| ||||||||    
T  38889101 atactctcctgatacgtatcggaaattatcaggcagatatcggtgcaggat-cgtagaggatacgatacgtcatccattttgaagtatcagggcttca 38889197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 349 - 457
Target Start/End: Complemental strand, 53192596 - 53192498
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    |||||||||||||||||||| ||||||||||||          |||| ||||||||||| |||| ||||||||||| |||||||||||| ||||||||||    
T  53192596 ttaatatttggatactctccggatacgtatcgg----------gcaggtatcggtgcaggatactcagggtatacggtacgtcatccattttgaagtatc 53192507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 349 - 457
Target Start/End: Complemental strand, 28704835 - 28704727
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    ||||||||| |||||||||| ||||| ||| |||||||||||   || |||| |||||| ||| |||||| ||||| |||||||||||| || |||||||    
T  28704835 ttaatattttgatactctccggatacatattggaaagtatcggataggtatcagtgcaggatatgcaggggatacggtacgtcatccattttaaagtatc 28704736  T
Q  449 ggggcttca 457  Q
    |||||||||    
T  28704735 ggggcttca 28704727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 349 - 457
Target Start/End: Original strand, 52505843 - 52505950
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    |||||||||||||||||| | |||||||||||| || ||||| || | ||||||||||| |||||||||| ||||  ||| |||||||| || |||||||    
T  52505843 ttaatatttggatactcttcggatacgtatcgggaaatatcgggccggtatcggtgcaggatacgcaggg-atacagtacatcatccatttttaagtatc 52505941  T
Q  449 ggggcttca 457  Q
    |||||||||    
T  52505942 ggggcttca 52505950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 16 - 71
Target Start/End: Original strand, 13352996 - 13353051
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattatatc 71  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  13352996 caaaaggaacattgttagtgctatactgtgtcgatccaaaaaagaagcactatatc 13353051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 349 - 456
Target Start/End: Complemental strand, 28968618 - 28968511
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    ||||| || ||||||||| | |||||||||||| |||||||| |||| ||||||||||| ||||| |  | ||| | |||||||||||| ||||||||||    
T  28968618 ttaatcttcggatactcttctgatacgtatcgggaagtatcgggcaggtatcggtgcaggatacgtaaaggatatggtacgtcatccattttgaagtatc 28968519  T
Q  449 ggggcttc 456  Q
    ||||||||    
T  28968518 ggggcttc 28968511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 349 - 457
Target Start/End: Original strand, 10225172 - 10225269
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    |||||||||||||||||||| ||||||||||||||||||||           ||||||| |||||||||| |||||||||||||||||| || |||||||    
T  10225172 ttaatatttggatactctccggatacgtatcggaaagtatc-----------ggtgcaggatacgcaggggatacgatacgtcatccattttaaagtatc 10225260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 359 - 457
Target Start/End: Complemental strand, 29915959 - 29915861
Alignment:
Q  359 gatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatcggggcttca 457  Q
    |||||| ||| |||||||||||| |||||||   ||| ||||||||||  |||||||||| ||||||||||||||| || ||||||||||||| |||||    
T  29915959 gatactatcctgatacgtatcgggaagtatcagacaggtatcggtgcatgatacgcaggggatacgatacgtcatctattttgaagtatcgggacttca 29915861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 359 - 457
Target Start/End: Complemental strand, 29965112 - 29965014
Alignment:
Q  359 gatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatcggggcttca 457  Q
    |||||| ||| |||||||||||| |||||||   ||| ||||||||||  |||||||||| ||||||||||||||| || ||||||||||||| |||||    
T  29965112 gatactatcctgatacgtatcgggaagtatcagacaggtatcggtgcatgatacgcaggggatacgatacgtcatctattttgaagtatcgggacttca 29965014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 349 - 457
Target Start/End: Original strand, 22611394 - 22611492
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    |||||||||||||||||||| ||||||||||||          |||| ||||||||||| | |||||||| ||||| |||||||||||| ||||||||||    
T  22611394 ttaatatttggatactctccggatacgtatcgg----------gcaggtatcggtgcaggaaacgcaggggatacggtacgtcatccattttgaagtatc 22611483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 350 - 415
Target Start/End: Complemental strand, 33240057 - 33239992
Alignment:
Q  350 taatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgca 415  Q
    |||||||||||||||||||||||||||||||| |||||||| |||| ||||| ||||| |||||||    
T  33240057 taatatttggatactctcccgatacgtatcgggaagtatcgggcaggtatcgatgcaggatacgca 33239992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 401 - 457
Target Start/End: Complemental strand, 19420961 - 19420905
Alignment:
Q  401 ggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatcggggcttca 457  Q
    ||||||| |||||||||| |||||||||||||||||| |||||||||||||||||||    
T  19420961 ggtgcaggatacgcaggggatacgatacgtcatccattttgaagtatcggggcttca 19420905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 349 - 457
Target Start/End: Original strand, 21157739 - 21157847
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    ||||| || ||||||||||| | |||||||| |||||||||| |||| ||||  ||||| || | ||| | |||||||||||||||||| ||||||||||    
T  21157739 ttaatcttcggatactctcctggtacgtatcagaaagtatcgggcagttatcaatgcaggatgcacagagaatacgatacgtcatccattttgaagtatc 21157838  T
Q  449 ggggcttca 457  Q
     ||||||||    
T  21157839 tgggcttca 21157847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 349 - 457
Target Start/End: Original strand, 30787572 - 30787680
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    ||||| || ||||||||||| |||||||||||  |||| || | ||  |||| || ||| |||||||||| ||||||||||||||| || ||||||||||    
T  30787572 ttaatcttcggatactctcctgatacgtatcgagaagtgtcaaacaagtatcagtacaggatacgcaggggatacgatacgtcatcgattttgaagtatc 30787671  T
Q  449 ggggcttca 457  Q
    |||||||||    
T  30787672 ggggcttca 30787680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 349 - 457
Target Start/End: Original strand, 41742082 - 41742190
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    ||||| || ||||||||||| |||| ||||||| |||||||  | || ||||||||||| |||| ||| | |||| ||||||||||||| ||||||||||    
T  41742082 ttaatcttcggatactctccagatatgtatcgggaagtatcaggaaggtatcggtgcaggatacacagaggatacaatacgtcatccattttgaagtatc 41742181  T
Q  449 ggggcttca 457  Q
    || ||||||    
T  41742182 ggcgcttca 41742190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 349 - 457
Target Start/End: Complemental strand, 42229782 - 42229674
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    ||||| || ||||||||| | |||||||||| | |||||||| |||| ||||||||||| |||||||||| |||  |||||||||| || |||||||||     
T  42229782 ttaattttcggatactcttctgatacgtatcaggaagtatcgggcaggtatcggtgcaggatacgcaggggatataatacgtcatctattttgaagtatt 42229683  T
Q  449 ggggcttca 457  Q
    || ||||||    
T  42229682 ggagcttca 42229674  T

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Target: chr3; HSP #50
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 16 - 75
Target Start/End: Original strand, 22610565 - 22610623
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattatatccaaa 75  Q
    |||||||||| |||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  22610565 caaaaggaac-ttgttagtgctatactatatcgatccaaaaaagaagcactatatccaaa 22610623  T

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Target: chr3; HSP #51
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 16 - 75
Target Start/End: Original strand, 25936367 - 25936425
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattatatccaaa 75  Q
    |||||||||| |||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  25936367 caaaaggaac-ttgttagtgctatactatatcgatccaaaaaagaagcactatatccaaa 25936425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 349 - 457
Target Start/End: Complemental strand, 2122815 - 2122704
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagg---gtatacgatacgtcatccatcttgaagt 445  Q
    ||||| || |||| |||||| |||||||||||| |||||||  |||  ||||||||||  |||||||||   | |||| ||||||||||||| |||||||    
T  2122815 ttaatcttcggattctctcctgatacgtatcgggaagtatcaggcaagtatcggtgcatgatacgcaggaggggatacaatacgtcatccattttgaagt 2122716  T
Q  446 atcggggcttca 457  Q
    ||||||||||||    
T  2122715 atcggggcttca 2122704  T

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Target: chr3; HSP #53
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 19 - 75
Target Start/End: Complemental strand, 19421730 - 19421674
Alignment:
Q  19 aaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattatatccaaa 75  Q
    ||||||||||||||||| |||||| ||||||| ||||||||||||| ||||||||||    
T  19421730 aaggaacattgttagtgttatactatatcgattcaaaaaagaagcactatatccaaa 19421674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 349 - 457
Target Start/End: Complemental strand, 45347405 - 45347299
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    ||||| || ||||||||| | ||||||||||| ||||||||| |||| |||| |||||| ||| |||||| |||||||| |||| |||| ||||||||||    
T  45347405 ttaatcttcggatactcttcggatacgtatcgaaaagtatcgggcaggtatcagtgcaggata-gcaggggatacgata-gtcaaccattttgaagtatc 45347308  T
Q  449 ggggcttca 457  Q
    || ||||||    
T  45347307 ggagcttca 45347299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 386 - 457
Target Start/End: Original strand, 19879140 - 19879211
Alignment:
Q  386 tatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatcggggcttca 457  Q
    ||||| |||| ||||||||||| |||||||||| ||||| |||||||||||| ||||||||| | |||||||    
T  19879140 tatcgggcaggtatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtattgcggcttca 19879211  T

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Target: chr3; HSP #56
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 16 - 71
Target Start/End: Original strand, 21006164 - 21006219
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattatatc 71  Q
    ||||| |||||||||||||| |||||| |||||||| |||||||||||||||||||    
T  21006164 caaaaagaacattgttagtgttatactatatcgatctaaaaaagaagcattatatc 21006219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 16 - 75
Target Start/End: Original strand, 37996579 - 37996637
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattatatccaaa 75  Q
    |||||||||| |||||||||||||||| |||||||||||||||||| || ||||||||||    
T  37996579 caaaaggaac-ttgttagtgctatactatatcgatccaaaaaagaatcactatatccaaa 37996637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 16 - 75
Target Start/End: Original strand, 45057102 - 45057161
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattatatccaaa 75  Q
    |||||| ||||||||||||| | |||| ||||||||||||||| ||||||||||||||||    
T  45057102 caaaagaaacattgttagtgttgtactatatcgatccaaaaaataagcattatatccaaa 45057161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 16 - 75
Target Start/End: Original strand, 52505112 - 52505170
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattatatccaaa 75  Q
    |||||||||| ||||||||| |||||| |||||||||||||||||| |||||||||||||    
T  52505112 caaaaggaac-ttgttagtgttatactatatcgatccaaaaaagaatcattatatccaaa 52505170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 397 - 451
Target Start/End: Original strand, 2567445 - 2567499
Alignment:
Q  397 tatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatcggg 451  Q
    ||||||||||| |||||||||  |||||||||||||||||| |||||||||||||    
T  2567445 tatcggtgcaggatacgcaggaaatacgatacgtcatccattttgaagtatcggg 2567499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 349 - 457
Target Start/End: Complemental strand, 1528600 - 1528502
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    |||||||||||||||||||| ||||||||||||          |||| ||||| ||||  |||||||||| ||| |||||||||||||| ||||||||||    
T  1528600 ttaatatttggatactctccggatacgtatcgg----------gcaggtatcgatgcatgatacgcaggggatatgatacgtcatccattttgaagtatc 1528511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 349 - 458
Target Start/End: Original strand, 7899729 - 7899838
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    ||||| || ||||||||| | |||||||||||| || |||| ||||||||| ||||||| ||||| | |  ||||  | |||||||||| ||||||||||    
T  7899729 ttaatcttcggatactcttctgatacgtatcgggaaatatcaagcagatataggtgcaggatacgtaagagatacatttcgtcatccattttgaagtatc 7899828  T
Q  449 ggggcttcat 458  Q
    | ||||||||    
T  7899829 gaggcttcat 7899838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 16 - 69
Target Start/End: Original strand, 19349427 - 19349480
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattata 69  Q
    |||||| |||||||| ||||||||||| ||||||||||||||||||||| ||||    
T  19349427 caaaagaaacattgtcagtgctatactatatcgatccaaaaaagaagcactata 19349480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 20509957 - 20510014
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattatatcca 73  Q
    ||||| |||||||||||||| |||||| | ||||||||||||||||||| ||||||||    
T  20509957 caaaatgaacattgttagtgttatactatgtcgatccaaaaaagaagcactatatcca 20510014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 22 - 75
Target Start/End: Original strand, 21157535 - 21157588
Alignment:
Q  22 gaacattgttagtgctatactgtatcgatccaaaaaagaagcattatatccaaa 75  Q
    ||||||||||||||||||||| |||| ||| |||||||||||| ||||||||||    
T  21157535 gaacattgttagtgctatactatatcaatcaaaaaaagaagcactatatccaaa 21157588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 42229959 - 42229906
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattata 69  Q
    ||||||||| ||||||||||||||||| ||||||| ||||||||||||| ||||    
T  42229959 caaaaggaatattgttagtgctatactatatcgattcaaaaaagaagcaatata 42229906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 397 - 458
Target Start/End: Complemental strand, 47642077 - 47642016
Alignment:
Q  397 tatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatcggggcttcat 458  Q
    ||||||||||| ||||||| || ||||| |||||||||||| ||||||||||| ||||||||    
T  47642077 tatcggtgcaggatacgcatgggatacggtacgtcatccattttgaagtatcgaggcttcat 47642016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 16 - 61
Target Start/End: Complemental strand, 48333257 - 48333212
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaa 61  Q
    ||||||||| ||||||||||||||||| ||||||||||||||||||    
T  48333257 caaaaggaatattgttagtgctatactatatcgatccaaaaaagaa 48333212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 16 - 61
Target Start/End: Complemental strand, 48334200 - 48334155
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaa 61  Q
    ||||| ||||||||||||||||||||| ||||||||||||||||||    
T  48334200 caaaaagaacattgttagtgctatactatatcgatccaaaaaagaa 48334155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 27 - 75
Target Start/End: Complemental strand, 1528853 - 1528805
Alignment:
Q  27 ttgttagtgctatactgtatcgatccaaaaaagaagcattatatccaaa 75  Q
    |||||||||||||||| |||||||||||||||||| || ||||||||||    
T  1528853 ttgttagtgctatactatatcgatccaaaaaagaatcactatatccaaa 1528805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 385 - 449
Target Start/End: Original strand, 13353232 - 13353296
Alignment:
Q  385 gtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatcg 449  Q
    |||||| ||||||||||| |||| |||||||||  |||||||||||||||||| || ||||||||    
T  13353232 gtatcgggcagatatcggcgcaggatacgcaggagatacgatacgtcatccattttaaagtatcg 13353296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 349 - 417
Target Start/End: Original strand, 45532990 - 45533058
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagg 417  Q
    |||||||||||||||||| | |||||||||||| |||||||| |||| ||||| ||||| || ||||||    
T  45532990 ttaatatttggatactcttcggatacgtatcgggaagtatcgggcaggtatcgatgcaggattcgcagg 45533058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 75
Target Start/End: Complemental strand, 7328054 - 7327996
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattatatccaaa 75  Q
    |||||||||| ||||||||| |||||| |||||||||||||||||| || ||||||||||    
T  7328054 caaaaggaac-ttgttagtgttatactatatcgatccaaaaaagaatcactatatccaaa 7327996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 71
Target Start/End: Original strand, 19878903 - 19878958
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattatatc 71  Q
    ||||||||| |||||||||| |||| | |||||||||||||||||| |||||||||    
T  19878903 caaaaggaatattgttagtgatatattatatcgatccaaaaaagaaacattatatc 19878958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 75
Target Start/End: Original strand, 22289544 - 22289603
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattatatccaaa 75  Q
    |||||| ||||||||||||| | |||| ||||||||||||||||||||| |||| |||||    
T  22289544 caaaagaaacattgttagtgttgtactatatcgatccaaaaaagaagcactatacccaaa 22289603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 75
Target Start/End: Original strand, 45532351 - 45532409
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattatatccaaa 75  Q
    |||||||||| |||||||||||||| | |||| |||||||||||||||| ||||||||||    
T  45532351 caaaaggaac-ttgttagtgctatattatatcaatccaaaaaagaagcactatatccaaa 45532409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 371 - 446
Target Start/End: Original strand, 47750922 - 47750997
Alignment:
Q  371 atacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagta 446  Q
    |||||||| | |||||||||||||| ||||||||||| |||||||| | |||   |||||||||||| ||||||||    
T  47750922 atacgtattgaaaagtatcgagcagctatcggtgcaggatacgcagaggatatagtacgtcatccattttgaagta 47750997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 71
Target Start/End: Complemental strand, 52684644 - 52684589
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattatatc 71  Q
    ||||| |||||||||||||| |||||| |||||||| |||||||||||| ||||||    
T  52684644 caaaaagaacattgttagtgttatactatatcgatctaaaaaagaagcactatatc 52684589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 15 - 61
Target Start/End: Complemental strand, 28548342 - 28548296
Alignment:
Q  15 tcaaaaggaacattgttagtgctatactgtatcgatccaaaaaagaa 61  Q
    |||||| |||||||||||||||||| || ||||||||||||||||||    
T  28548342 tcaaaaagaacattgttagtgctatgctatatcgatccaaaaaagaa 28548296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 349 - 457
Target Start/End: Complemental strand, 25700868 - 25700762
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    ||||| || ||||||||||| |||||||||  | |||||||  |||| ||||||||||| |||||||| | |||| |||  |||||||  ||||||||||    
T  25700868 ttaatcttcggatactctcctgatacgtattaggaagtatcaggcaggtatcggtgcaggatacgcagaggatacaatatatcatcca--ttgaagtatc 25700771  T
Q  449 ggggcttca 457  Q
    | |||||||    
T  25700770 gaggcttca 25700762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 288 - 333
Target Start/End: Complemental strand, 35389916 - 35389871
Alignment:
Q  288 cacaagtatccgtgtgtatcaggacgtatcggaaaattattttctt 333  Q
    |||||||||||||| ||||| ||| |||||||||||||||||||||    
T  35389916 cacaagtatccgtgcgtatcgggatgtatcggaaaattattttctt 35389871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 370 - 447
Target Start/End: Complemental strand, 39664045 - 39663968
Alignment:
Q  370 gatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtat 447  Q
    |||||||||||||||||||||  ||| ||||||||||| |||||||| | |||  |||| ||| |||| |||||||||    
T  39664045 gatacgtatcggaaagtatcggacaggtatcggtgcaggatacgcagagaatagaatacatcaaccattttgaagtat 39663968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 27 - 75
Target Start/End: Original strand, 38888897 - 38888945
Alignment:
Q  27 ttgttagtgctatactgtatcgatccaaaaaagaagcattatatccaaa 75  Q
    |||||||||||||||| |||| |||||||||| ||||| ||||||||||    
T  38888897 ttgttagtgctatactttatcaatccaaaaaataagcactatatccaaa 38888945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 75
Target Start/End: Original strand, 1678980 - 1679027
Alignment:
Q  28 tgttagtgctatactgtatcgatccaaaaaagaagcattatatccaaa 75  Q
    |||||||| |||||| |||||||||||||||||| || ||||||||||    
T  1678980 tgttagtgatatactatatcgatccaaaaaagaatcactatatccaaa 1679027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 75
Target Start/End: Original strand, 10224448 - 10224506
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattatatccaaa 75  Q
    |||||||||| ||||||||| ||||||  ||||||||||||||||| || ||||||||||    
T  10224448 caaaaggaac-ttgttagtgttatactaaatcgatccaaaaaagaatcactatatccaaa 10224506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 16 - 70
Target Start/End: Original strand, 7899520 - 7899574
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattatat 70  Q
    |||||| ||||||| |||||||||||| ||||||||||||  ||||||| |||||    
T  7899520 caaaagaaacattgctagtgctatactatatcgatccaaacgagaagcactatat 7899574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 447
Target Start/End: Complemental strand, 49419295 - 49419245
Alignment:
Q  397 tatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtat 447  Q
    ||||| ||||| ||||||| || |||||||||||||||||| |||||||||    
T  49419295 tatcgatgcaggatacgcaagggatacgatacgtcatccattttgaagtat 49419245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 288 - 330
Target Start/End: Complemental strand, 52121346 - 52121304
Alignment:
Q  288 cacaagtatccgtgtgtatcaggacgtatcggaaaattatttt 330  Q
    |||||||||||||||||||||| | |||||| |||||||||||    
T  52121346 cacaagtatccgtgtgtatcagaaagtatcgaaaaattatttt 52121304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 29916087 - 29916034
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattata 69  Q
    ||||| |||||||||||||| |||||| |||||||| |||| ||||||| ||||    
T  29916087 caaaatgaacattgttagtgttatactatatcgatctaaaacagaagcactata 29916034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 29965240 - 29965187
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattata 69  Q
    ||||| |||||||||||||| |||||| |||||||| |||| ||||||| ||||    
T  29965240 caaaatgaacattgttagtgttatactatatcgatctaaaacagaagcactata 29965187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 288 - 333
Target Start/End: Complemental strand, 33240116 - 33240071
Alignment:
Q  288 cacaagtatccgtgtgtatcaggacgtatcggaaaattattttctt 333  Q
    |||||||||||||| ||||  ||||||||||| |||||||||||||    
T  33240116 cacaagtatccgtgcgtattgggacgtatcggtaaattattttctt 33240071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 360 - 421
Target Start/End: Original strand, 45057253 - 45057314
Alignment:
Q  360 atactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtat 421  Q
    ||||||||  |||||||||||| |||||||| |||  ||||||||||| ||||||| |||||    
T  45057253 atactctcatgatacgtatcgggaagtatcgggcaagtatcggtgcaggatacgcaaggtat 45057314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 61
Target Start/End: Complemental strand, 47642323 - 47642278
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaa 61  Q
    ||||| |||||||||||||| |||||| |||||||| |||||||||    
T  47642323 caaaaagaacattgttagtgttatactatatcgatctaaaaaagaa 47642278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 385 - 457
Target Start/End: Original strand, 19349636 - 19349708
Alignment:
Q  385 gtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatcggggcttca 457  Q
    |||||| |||| |||| ||||||  ||| ||||  ||||||||||||| |||| |||||||||||| ||||||    
T  19349636 gtatcgggcaggtatcagtgcaggttacacaggagatacgatacgtcaaccattttgaagtatcggagcttca 19349708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 421 - 457
Target Start/End: Complemental strand, 33238759 - 33238723
Alignment:
Q  421 tacgatacgtcatccatcttgaagtatcggggcttca 457  Q
    |||| |||||||||||| |||||||||||||||||||    
T  33238759 tacggtacgtcatccattttgaagtatcggggcttca 33238723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 174; Significance: 2e-93; HSPs: 91)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 16 - 233
Target Start/End: Complemental strand, 19510942 - 19510725
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattatatccaaagtggagggcaaccattttggaagaaaaagttgaaacccta 115  Q
    |||||||||||||| ||||| |||| | ||||||||||| ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  19510942 caaaaggaacattgctagtgttatattatatcgatccaagaaagaagcactatatccaaagtggaaggcaaccattttggaagaaaaagttgaaacccta 19510843  T
Q  116 attttttaaaaaggggaagatgaaattgtttatgtggtatggtgtgggtcgtactggcaccaaagaaagataaaggaaatgtatatatattatagtaata 215  Q
    |||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19510842 attttttagaaaggggaagatgaaattgtttctgtggtatggtgtgggtcgtactggcaccaaagaaagataaaggaaatgtatatatattatagtaata 19510743  T
Q  216 tgatgattttattcttat 233  Q
    | ||| ||||||||||||    
T  19510742 taatgtttttattcttat 19510725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 16 - 233
Target Start/End: Original strand, 16564042 - 16564258
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattatatccaaagtggagggcaaccattttggaagaaaaagttgaaacccta 115  Q
    ||||||||||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||||| ||| ||||||||| ||||||||||||||||||||    
T  16564042 caaaaggaacattgttaatgctatactatatcgatccaaaaaagaagcactatatccaaagtggaaggcgaccattttgaaagaaaaagttgaaacccta 16564141  T
Q  116 attttttaaaaaggggaagatgaaattgtttatgtggtatggtgtgggtcgtactggcaccaaagaaagataaaggaaatgtatatatattatagtaata 215  Q
    ||||||||||| ||||||||||||||||||| |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||     
T  16564142 attttttaaaa-ggggaagatgaaattgtttttgtggtatggtgtgagtcttactggcaccaaagaaagataaaggaaatgtatatatattatagtaatg 16564240  T
Q  216 tgatgattttattcttat 233  Q
    | ||| ||||||||||||    
T  16564241 taatgtttttattcttat 16564258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 16 - 233
Target Start/End: Complemental strand, 16601620 - 16601404
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattatatccaaagtggagggcaaccattttggaagaaaaagttgaaacccta 115  Q
    ||||||||||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||||| ||| ||||||||| ||||||||||||||||||||    
T  16601620 caaaaggaacattgttaatgctatactatatcgatccaaaaaagaagcactatatccaaagtggaaggcgaccattttgaaagaaaaagttgaaacccta 16601521  T
Q  116 attttttaaaaaggggaagatgaaattgtttatgtggtatggtgtgggtcgtactggcaccaaagaaagataaaggaaatgtatatatattatagtaata 215  Q
    ||||||||||| ||||||||||||||||||| |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||     
T  16601520 attttttaaaa-ggggaagatgaaattgtttttgtggtatggtgtgagtcttactggcaccaaagaaagataaaggaaatgtatatatattatagtaatg 16601422  T
Q  216 tgatgattttattcttat 233  Q
    | ||| ||||||||||||    
T  16601421 taatgtttttattcttat 16601404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 17 - 241
Target Start/End: Complemental strand, 8029125 - 8028901
Alignment:
Q  17 aaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattatatccaaagtggagggcaaccattttggaagaaaaagttgaaaccctaa 116  Q
    ||||| |||||||||||||||||| | ||||||| ||||||||||| | ||||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  8029125 aaaagaaacattgttagtgctatagtatatcgattcaaaaaagaagtactatatccaaagtggaaggcgaccattttggaagaaaaagttgaaaccctaa 8029026  T
Q  117 ttttttaaaaaggggaagatgaaattgtttatgtggtatggtgtgggtcgtactggcaccaaagaaagataaaggaaatgtatatatattatagtaatat 216  Q
    ||||||| |||||||||||||||||||||| ||| |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||    
T  8029025 ttttttagaaaggggaagatgaaattgtttctgtcgtatggtgtgggtcgtactgacaccaaagaaagataaatgaaatgtatatatattatagtaatat 8028926  T
Q  217 gatgattttattcttatggtttttt 241  Q
     ||| ||||||||||||| ||||||    
T  8028925 aatgtttttattcttatgttttttt 8028901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 16 - 233
Target Start/End: Original strand, 26773382 - 26773602
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattatatccaaagtggag----ggcaaccattttggaagaaaaagttgaaac 111  Q
    |||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||     ||| ||||||||||||||||||||||||||    
T  26773382 caaacggaacattgttagtgctatactatatcgatccaaaaaagaagcattatatccaaagttgaaagaaggcgaccattttggaagaaaaagttgaaac 26773481  T
Q  112 cctaattttttaaaaaggggaagatgaaattgtttatgtggtatggtgtgggtcgtactggcaccaaagaaagataaaggaaatgtatatatattatagt 211  Q
    |||||||||| | |||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26773482 cctaattttt-agaaaggggaagatgaaattgtttctgtggtgtggtgtgggtcgtactggcaccaaagaaagataaaggaaatgtatatatattatagt 26773580  T
Q  212 aatatgatgattttattcttat 233  Q
    ||||| ||| ||||||||||||    
T  26773581 aatataatgtttttattcttat 26773602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 16 - 168
Target Start/End: Original strand, 1042869 - 1043021
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattatatccaaagtggagggcaaccattttggaagaaaaagttgaaacccta 115  Q
    |||||||||||||||||||| |||||| ||||||||||||||||||||| ||||||||||||||| ||| | ||||||||||||||||||||||||||||    
T  1042869 caaaaggaacattgttagtgttatactatatcgatccaaaaaagaagcactatatccaaagtggaaggcgatcattttggaagaaaaagttgaaacccta 1042968  T
Q  116 attttttaaaaaggggaagatgaaattgtttatgtggtatggtgtgggtcgta 168  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  1042969 attttttagaaaggggaagatgaaattgtttatgtggtatggtgtgggtcgta 1043021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 16 - 201
Target Start/End: Complemental strand, 4291987 - 4291799
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattatatccaaagtggagggcaaccat----tttggaagaaaaagttgaaac 111  Q
    ||||||||||||||||| || |||||| |||||||||||||| |||||| || |||||||||||| ||| |||||    |||||||||||||||||||||    
T  4291987 caaaaggaacattgttaatgttatactatatcgatccaaaaa-gaagcactacatccaaagtggaaggcgaccatgcattttggaagaaaaagttgaaac 4291889  T
Q  112 cctaattttttaaaaaggggaagatgaaattgtttatgtggtatggtgtgggtcgtactggcaccaaagaaagataaaggaaatgtatat 201  Q
    |||| | |||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4291888 cctagtattttaaaaaggggaagatgaaattgtttctatggtatggtgtgggtcgtactggcaccaaagaaagataaaggaaatgtatat 4291799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 71 - 233
Target Start/End: Complemental strand, 40096031 - 40095869
Alignment:
Q  71 ccaaagtggagggcaaccattttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaaattgtttatgtggtatggtgtgggtcgtact 170  Q
    |||||||||| ||| |||| ||||||||||||||||||||||||||||| ||| |||||| |||||| ||||| || |||||| ||||||||||||||||    
T  40096031 ccaaagtggacggcgaccactttggaagaaaaagttgaaaccctaatttcttagaaagggaaagatgcaattggttgtgtggtgtggtgtgggtcgtact 40095932  T
Q  171 ggcaccaaagaaagataaaggaaatgtatatatattatagtaatatgatgattttattcttat 233  Q
    ||||||||||||||||||||||||| |||||||||||||||||||| ||| ||||||||||||    
T  40095931 ggcaccaaagaaagataaaggaaatatatatatattatagtaatataatgtttttattcttat 40095869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 71 - 233
Target Start/End: Complemental strand, 39521144 - 39520982
Alignment:
Q  71 ccaaagtggagggcaaccattttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaaattgtttatgtggtatggtgtgggtcgtact 170  Q
    |||||||||| ||| |||| ||||||||||||||||||||||||||||| ||| |||||| |||||| ||||| || |||||| ||||||||||||||||    
T  39521144 ccaaagtggacggcgaccactttggaagaaaaagttgaaaccctaatttcttagaaagggaaagatgcaattggttgtgtggtgtggtgtgggtcgtact 39521045  T
Q  171 ggcaccaaagaaagataaaggaaatgtatatatattatagtaatatgatgattttattcttat 233  Q
     |||||||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||    
T  39521044 agcaccaaagaaagataaaagaaatgtatatatattatagtaatataatgtttttattcttat 39520982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 73 - 233
Target Start/End: Complemental strand, 36660838 - 36660680
Alignment:
Q  73 aaagtggagggcaaccattttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaaattgtttatgtggtatggtgtgggtcgtactgg 172  Q
    |||||||| ||| |||| ||||||||||||||||||||||||||||| ||| |||||| |||||| ||||||||  ||||| ||||||||||| ||||||    
T  36660838 aaagtggacggcgaccactttggaagaaaaagttgaaaccctaatttcttagaaagggaaagatgcaattgttt--gtggtgtggtgtgggtcatactgg 36660741  T
Q  173 caccaaagaaagataaaggaaatgtatatatattatagtaatatgatgattttattcttat 233  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||    
T  36660740 caccaaagaaagataaaggaaatgtatatatattatagtaatataatgtttttattcttat 36660680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 71 - 233
Target Start/End: Complemental strand, 11830069 - 11829912
Alignment:
Q  71 ccaaagtggagggcaaccattttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaaattgtttatgtggtatggtgtgggtcgtact 170  Q
    |||||||||| ||| |||| ||||||||||||||||||||||||||||| ||| |||||| |||||| ||||||||     || |||||||| |||||||    
T  11830069 ccaaagtggacggcgaccactttggaagaaaaagttgaaaccctaatttcttagaaagggaaagatgcaattgttt-----gtgtggtgtggatcgtact 11829975  T
Q  171 ggcaccaaagaaagataaaggaaatgtatatatattatagtaatatgatgattttattcttat 233  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| ||  ||||||||||||    
T  11829974 ggcaccaaagaaagataaaggatatgtatatatattatagtaatataatatttttattcttat 11829912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 349 - 457
Target Start/End: Original strand, 1043081 - 1043189
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    |||||||||||||||||||||||||||||||||||||||||  |||| ||||| ||||| |||||||||| |||||||||||||||||| ||||||||||    
T  1043081 ttaatatttggatactctcccgatacgtatcggaaagtatcaggcaggtatcgatgcaggatacgcaggggatacgatacgtcatccattttgaagtatc 1043180  T
Q  449 ggggcttca 457  Q
    |||||||||    
T  1043181 ggggcttca 1043189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 349 - 457
Target Start/End: Complemental strand, 25969502 - 25969394
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    |||||||||||||||||||| |||||||||||| |||||||| |||| ||||||||||| |||||||||| |||||||||||||||||| ||||||||||    
T  25969502 ttaatatttggatactctccggatacgtatcgggaagtatcgggcaggtatcggtgcaggatacgcaggggatacgatacgtcatccattttgaagtatc 25969403  T
Q  449 ggggcttca 457  Q
    |||||||||    
T  25969402 ggggcttca 25969394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 349 - 457
Target Start/End: Complemental strand, 34238263 - 34238155
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    ||||||||||||||||||||  |||||||||||||||||||| |||| |||||||||||||||||||||| ||||| |||||||||||| ||||||||||    
T  34238263 ttaatatttggatactctccgaatacgtatcggaaagtatcgggcaggtatcggtgcagaatacgcaggggatacggtacgtcatccattttgaagtatc 34238164  T
Q  449 ggggcttca 457  Q
    |||||||||    
T  34238163 ggggcttca 34238155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 349 - 457
Target Start/End: Complemental strand, 27354026 - 27353918
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    |||||||||||||||||||| |||||||||||| |||||||| |||| ||||||||||| |||||||||| ||||| |||||||||||| ||||||||||    
T  27354026 ttaatatttggatactctccggatacgtatcgggaagtatcgggcaggtatcggtgcaggatacgcagggaatacggtacgtcatccattttgaagtatc 27353927  T
Q  449 ggggcttca 457  Q
    |||||||||    
T  27353926 ggggcttca 27353918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 349 - 457
Target Start/End: Complemental strand, 40095755 - 40095647
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    ||||||||| |||||||||| ||||||||||||||||||||| |||| ||||||||||| |||||||||| ||||| |||||||||||| ||||||||||    
T  40095755 ttaatatttagatactctccggatacgtatcggaaagtatcgggcaggtatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatc 40095656  T
Q  449 ggggcttca 457  Q
    |||||||||    
T  40095655 ggggcttca 40095647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 349 - 457
Target Start/End: Complemental strand, 11829794 - 11829686
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    |||||||||||||||||||| ||||||||| || |||||||  |||||||||||||||| |||||||||| ||||| |||||||||||| ||||||||||    
T  11829794 ttaatatttggatactctccggatacgtattgggaagtatcaggcagatatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatc 11829695  T
Q  449 ggggcttca 457  Q
    |||||||||    
T  11829694 ggggcttca 11829686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 349 - 457
Target Start/End: Original strand, 26773722 - 26773830
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    ||||||||||||||||||||||||||||||||  |||||||| |||||||||||||||| ||||||| || ||||||||||||||| || || |||||||    
T  26773722 ttaatatttggatactctcccgatacgtatcgagaagtatcgggcagatatcggtgcaggatacgcaagggatacgatacgtcatcaattttaaagtatc 26773821  T
Q  449 ggggcttca 457  Q
    |||||||||    
T  26773822 ggggcttca 26773830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 125 - 233
Target Start/End: Original strand, 26843779 - 26843887
Alignment:
Q  125 aaaggggaagatgaaattgtttatgtggtatggtgtgggtcgtactggcaccaaagaaagataaaggaaatgtatatatattatagtaatatgatgattt 224  Q
    |||||| |||||| ||||| || |||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||  |||    
T  26843779 aaagggaaagatgcaattgattgtgtggtgtggtgtgggtcgtacgggcaccaaagaaagataaaggaaatgtatatatattatagtaatataatatttt 26843878  T
Q  225 tattcttat 233  Q
    |||||||||    
T  26843879 tattcttat 26843887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 349 - 457
Target Start/End: Complemental strand, 38263104 - 38262996
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    |||||||||||||||||||| ||||||||||||||||||||| |||| ||||| ||||| |||||||| | ||||| |||||||||||| ||||||||||    
T  38263104 ttaatatttggatactctccggatacgtatcggaaagtatcgggcaggtatcgatgcaggatacgcagagaatacggtacgtcatccattttgaagtatc 38263005  T
Q  449 ggggcttca 457  Q
    |||||||||    
T  38263004 ggggcttca 38262996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 349 - 457
Target Start/End: Complemental strand, 48163513 - 48163405
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    |||||||||||||||||||| |||||||||||| |||||||| |||| ||||||||||| |||||||||| ||||| ||||||| |||| ||||||||||    
T  48163513 ttaatatttggatactctccggatacgtatcgggaagtatcgggcaggtatcggtgcaggatacgcaggggatacggtacgtcacccattttgaagtatc 48163414  T
Q  449 ggggcttca 457  Q
    |||||||||    
T  48163413 ggggcttca 48163405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 349 - 446
Target Start/End: Original strand, 9250432 - 9250529
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagta 446  Q
    |||||||||||||||||||| |||||||||||| |||||||| |||| ||||||||||| |||||||||| |||||||||||||||||| ||||||||    
T  9250432 ttaatatttggatactctccggatacgtatcgggaagtatcgggcaggtatcggtgcaggatacgcaggggatacgatacgtcatccattttgaagta 9250529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 148 - 233
Target Start/End: Original strand, 27397865 - 27397950
Alignment:
Q  148 tgtggtatggtgtgggtcgtactggcaccaaagaaagataaaggaaatgtatatatattatagtaatatgatgattttattcttat 233  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| ||||||||||||    
T  27397865 tgtggtgtggtgtgggtcgtactggcaccaaagaaagataaaggaaatatatatatattatagtaatataatgtttttattcttat 27397950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 349 - 457
Target Start/End: Original strand, 27555379 - 27555487
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    |||||||||||||||||||| |||||||||||| ||||||||  ||| |||||||||||||||||||| | ||||| |||||||||||| ||||||||||    
T  27555379 ttaatatttggatactctccggatacgtatcgggaagtatcggacaggtatcggtgcagaatacgcagagaatacggtacgtcatccattttgaagtatc 27555478  T
Q  449 ggggcttca 457  Q
     ||||||||    
T  27555479 agggcttca 27555487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 349 - 458
Target Start/End: Original strand, 34122627 - 34122736
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    |||||||||||||||||||| |||||||||||| |||||||| |||| ||||||||||| |||||||| | ||||| |||||||||||| ||||||||||    
T  34122627 ttaatatttggatactctccagatacgtatcgggaagtatcgggcaggtatcggtgcaggatacgcagaggatacggtacgtcatccattttgaagtatc 34122726  T
Q  449 ggggcttcat 458  Q
      ||||||||    
T  34122727 taggcttcat 34122736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 158 - 233
Target Start/End: Original strand, 34122430 - 34122505
Alignment:
Q  158 tgtgggtcgtactggcaccaaagaaagataaaggaaatgtatatatattatagtaatatgatgattttattcttat 233  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||    
T  34122430 tgtgggtcgtactggcaccaaagaaagataaatgaaatgtatatatattatagtaatataatgtttttattcttat 34122505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 349 - 458
Target Start/End: Original strand, 27398057 - 27398166
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    |||||||||||||||||||| ||||| ||| |||||||||||||||| |||| |||||| |||||||||| ||||  |||||||||||| || |||||||    
T  27398057 ttaatatttggatactctccggatacatattggaaagtatcgagcaggtatcagtgcaggatacgcaggggatacagtacgtcatccattttaaagtatc 27398156  T
Q  449 ggggcttcat 458  Q
     |||||||||    
T  27398157 cgggcttcat 27398166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 349 - 457
Target Start/End: Complemental strand, 16850891 - 16850783
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    |||||||||||||||||| | ||||||||||||||||||||| |||  ||||||||||  |||| ||||| ||||| |||||||||||| ||||| ||||    
T  16850891 ttaatatttggatactcttcagatacgtatcggaaagtatcgggcaagtatcggtgcatgatacacagggaatacggtacgtcatccattttgaaatatc 16850792  T
Q  449 ggggcttca 457  Q
    |||||||||    
T  16850791 ggggcttca 16850783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 125 - 214
Target Start/End: Complemental strand, 34238474 - 34238385
Alignment:
Q  125 aaaggggaagatgaaattgtttatgtggtatggtgtgggtcgtactggcaccaaagaaagataaaggaaatgtatatatattatagtaat 214  Q
    |||||| |||||| ||||| ||  ||||| ||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  34238474 aaagggaaagatgcaattggttgcgtggtgtggtgtgggtcgtacgggcaccaaagaaagataaagaaaatgtatatatattatagtaat 34238385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 349 - 457
Target Start/End: Complemental strand, 19510628 - 19510520
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    ||||||||||||||||| |||||||| |||| | |||||||| |||  |||| |||||  |||| ||||| |||||||||||||||||| ||||||||||    
T  19510628 ttaatatttggatactcacccgatacatatcaggaagtatcgggcatgtatcagtgcatgatacacaggggatacgatacgtcatccattttgaagtatc 19510529  T
Q  449 ggggcttca 457  Q
    |||| ||||    
T  19510528 ggggtttca 19510520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 359 - 446
Target Start/End: Complemental strand, 11058447 - 11058360
Alignment:
Q  359 gatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagta 446  Q
    ||||||||||| ||||||||| |||||||||   ||||||||||||||| |||||||||| ||||| |||||||||||| ||||||||    
T  11058447 gatactctcccaatacgtatctgaaagtatcagacagatatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagta 11058360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 17 - 75
Target Start/End: Original strand, 23078911 - 23078969
Alignment:
Q  17 aaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattatatccaaa 75  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  23078911 aaaaggaacattgttagtgctatactatatcgatccaaaaaagaagcactatatccaaa 23078969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 148 - 210
Target Start/End: Complemental strand, 38265072 - 38265010
Alignment:
Q  148 tgtggtatggtgtgggtcgtactggcaccaaagaaagataaaggaaatgtatatatattatag 210  Q
    |||||| |||||||||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  38265072 tgtggtgtggtgtgggtcgtactagcaccaaaaaaagataaaggaaatgtatatatattatag 38265010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 148 - 214
Target Start/End: Complemental strand, 42897274 - 42897208
Alignment:
Q  148 tgtggtatggtgtgggtcgtactggcaccaaagaaagataaaggaaatgtatatatattatagtaat 214  Q
    |||||| ||||| ||||||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  42897274 tgtggtgtggtgcgggtcgtacgggcaccaaagaaagataaagaaaatgtatatatattatagtaat 42897208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 349 - 458
Target Start/End: Complemental strand, 35159970 - 35159861
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    ||||| || ||||||||||| |||||||||||| ||||||    ||  ||||||||||||||| |||||| ||||||||| |||||||| ||||||||||    
T  35159970 ttaatcttcggatactctcctgatacgtatcgggaagtattagacaagtatcggtgcagaatatgcaggggatacgatacatcatccattttgaagtatc 35159871  T
Q  449 ggggcttcat 458  Q
    || |||||||    
T  35159870 ggagcttcat 35159861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 358 - 454
Target Start/End: Original strand, 23079059 - 23079155
Alignment:
Q  358 ggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatcggggct 454  Q
    ||||||||||| |||||||||||| |||||||| | || ||||| | ||| |||||||||| ||||| || ||||||||| ||||||||||||||||    
T  23079059 ggatactctcctgatacgtatcgggaagtatcgggtaggtatcgatccaggatacgcaggggatacggtatgtcatccattttgaagtatcggggct 23079155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 349 - 449
Target Start/End: Original strand, 26845906 - 26846006
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    ||||||||||||||||||||  ||||||||||| |||||| | |||| ||||||||||| ||||||| |  ||||| ||| |||||||| ||||||||||    
T  26845906 ttaatatttggatactctccaaatacgtatcgggaagtattgggcaggtatcggtgcaggatacgcatgagatacggtacatcatccattttgaagtatc 26846005  T
Q  449 g 449  Q
    |    
T  26846006 g 26846006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 349 - 457
Target Start/End: Complemental strand, 33454175 - 33454067
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    ||||| || ||||||| ||| |||||||||||  |||||||   || ||||| |||||| |||||||||| |||||||||||||||||| ||||| ||||    
T  33454175 ttaatcttcggatactttcctgatacgtatcgagaagtatctgacatatatcagtgcaggatacgcaggggatacgatacgtcatccattttgaaatatc 33454076  T
Q  449 ggggcttca 457  Q
    |||||||||    
T  33454075 ggggcttca 33454067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 349 - 457
Target Start/End: Original strand, 44960145 - 44960253
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    ||||| |||||||||||| | ||||| |||||| |||||||   ||| | || |||||| |||||||||| |||||||||||||||||| ||||||||||    
T  44960145 ttaatctttggatactcttctgatacatatcgggaagtatcagacaggtgtcagtgcaggatacgcaggggatacgatacgtcatccattttgaagtatc 44960244  T
Q  449 ggggcttca 457  Q
    || ||||||    
T  44960245 ggagcttca 44960253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 370 - 457
Target Start/End: Complemental strand, 4291596 - 4291509
Alignment:
Q  370 gatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatcggggcttca 457  Q
    |||||||||||| ||||||||  ||| ||||||||||| |||||||||| ||||| ||| |||||||| || ||||||||||||||||    
T  4291596 gatacgtatcgggaagtatcggacaggtatcggtgcaggatacgcaggggatacggtacatcatccattttaaagtatcggggcttca 4291509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 16 - 75
Target Start/End: Complemental strand, 11830517 - 11830459
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattatatccaaa 75  Q
    |||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||    
T  11830517 caaaaggaac-ttgttagtgctatactatatcgatccaaaaaagaagcattatatccaaa 11830459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 349 - 457
Target Start/End: Complemental strand, 39520894 - 39520797
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    |||||||||||||||||||| |||||||||||| ||||||||           |||||| |||||||||| ||||| |||||||||||| ||||||||||    
T  39520894 ttaatatttggatactctccggatacgtatcgggaagtatcg-----------gtgcaggatacgcaggggatacggtacgtcatccattttgaagtatc 39520806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 349 - 457
Target Start/End: Complemental strand, 42897096 - 42896999
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    |||||||||||||||||||| |||||||||||| ||||||||           |||||| |||||||||| ||||| |||||||||||| ||||||||||    
T  42897096 ttaatatttggatactctccggatacgtatcgggaagtatcg-----------gtgcaggatacgcaggggatacggtacgtcatccattttgaagtatc 42897008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 16 - 69
Target Start/End: Original strand, 23969949 - 23970002
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattata 69  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  23969949 caaaaggaacattgttagtgctatactatatcgatccaaaaaagaagcactata 23970002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 48153837 - 48153784
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattata 69  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  48153837 caaaaggaacattgttagtgctatactatatcgatccaaaaaagaagcactata 48153784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 15 - 75
Target Start/End: Original strand, 27397406 - 27397465
Alignment:
Q  15 tcaaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattatatccaaa 75  Q
    ||||||||||| |||||||||||||| | ||||||||||||||||||||||||||||||||    
T  27397406 tcaaaaggaac-ttgttagtgctataatatatcgatccaaaaaagaagcattatatccaaa 27397465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 349 - 457
Target Start/End: Complemental strand, 38064700 - 38064592
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    ||||| || ||||||||||| |||||||||||||||||||||  ||| |||| |||||  ||||||| |  ||||| || ||||||||| || |||||||    
T  38064700 ttaatcttcggatactctcctgatacgtatcggaaagtatcggtcaggtatcagtgcatgatacgcatgagatacgttatgtcatccattttaaagtatc 38064601  T
Q  449 ggggcttca 457  Q
    |||||||||    
T  38064600 ggggcttca 38064592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 16 - 75
Target Start/End: Original strand, 19820799 - 19820858
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattatatccaaa 75  Q
    ||||||||||||||||||||||||||| ||||||| | ||||||||||| ||||||||||    
T  19820799 caaaaggaacattgttagtgctatactatatcgattcgaaaaagaagcactatatccaaa 19820858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 386 - 457
Target Start/End: Original strand, 47238654 - 47238725
Alignment:
Q  386 tatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatcggggcttca 457  Q
    ||||| |||| ||||||||||  |||||||||| ||||||||| |||||||| |||||||||||||||||||    
T  47238654 tatcgggcaggtatcggtgcaatatacgcaggggatacgatacatcatccattttgaagtatcggggcttca 47238725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 370 - 448
Target Start/End: Complemental strand, 48153698 - 48153620
Alignment:
Q  370 gatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    ||||||||||||||| ||| |||||| ||||||||||||||||| || | ||||||||| |||||||| || |||||||    
T  48153698 gatacgtatcggaaaatattgagcaggtatcggtgcagaatacggagaggatacgatacatcatccattttaaagtatc 48153620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 21409682 - 21409629
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattata 69  Q
    |||||| || ||||||||||||||||| ||||||||||||||||||||||||||    
T  21409682 caaaagaaatattgttagtgctatactatatcgatccaaaaaagaagcattata 21409629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 26973349 - 26973296
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattata 69  Q
    |||||| |||||||||||||||||||| ||||||||||||||||||||| ||||    
T  26973349 caaaagaaacattgttagtgctatactatatcgatccaaaaaagaagcactata 26973296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 33454384 - 33454327
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattatatcca 73  Q
    ||||| |||||||||||||| |||||| ||||||||||||||||||||| ||||||||    
T  33454384 caaaatgaacattgttagtgttatactatatcgatccaaaaaagaagcactatatcca 33454327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 397 - 458
Target Start/End: Original strand, 36758054 - 36758115
Alignment:
Q  397 tatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatcggggcttcat 458  Q
    |||||||||||||||||||||| ||||||||| |||| ||| ||||||||| ||||||||||    
T  36758054 tatcggtgcagaatacgcaggggatacgatacatcattcattttgaagtattggggcttcat 36758115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 397 - 458
Target Start/End: Original strand, 36767578 - 36767639
Alignment:
Q  397 tatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatcggggcttcat 458  Q
    |||||||||||||||||||||| ||||||||| |||| ||| ||||||||| ||||||||||    
T  36767578 tatcggtgcagaatacgcaggggatacgatacatcattcattttgaagtattggggcttcat 36767639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 349 - 413
Target Start/End: Complemental strand, 8028802 - 8028738
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacg 413  Q
    ||||||||||||||||||||||||||||||| | |||||||| || | ||||||||||| |||||    
T  8028802 ttaatatttggatactctcccgatacgtatcaggaagtatcgggccggtatcggtgcaggatacg 8028738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 349 - 457
Target Start/End: Complemental strand, 21409496 - 21409388
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    ||||| |||||||||||||| |||||||||||| | |||||  |||| |||| |||||| |||  ||||  |||||||||||||||||| || ||||||     
T  21409496 ttaatctttggatactctcctgatacgtatcgggatgtatcaggcaggtatcagtgcaggatatacaggagatacgatacgtcatccatttttaagtatg 21409397  T
Q  449 ggggcttca 457  Q
     ||||||||    
T  21409396 agggcttca 21409388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 349 - 452
Target Start/End: Original strand, 36202798 - 36202891
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    |||||||||||||||||||| ||||||||||||          ||||  |||||||||| |||||||||| ||||| |||||||||||| ||||||||||    
T  36202798 ttaatatttggatactctccggatacgtatcgg----------gcaggcatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatc 36202887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 16 - 75
Target Start/End: Original strand, 47238039 - 47238098
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattatatccaaa 75  Q
    ||||||| ||||||||| ||||||||| ||||||| ||||||||||||| ||||||||||    
T  47238039 caaaagggacattgttaatgctatactatatcgattcaaaaaagaagcactatatccaaa 47238098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 16 - 75
Target Start/End: Complemental strand, 48163757 - 48163699
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattatatccaaa 75  Q
    |||||||||| |||||||||||||||| |||||||||||||||||| || ||||||||||    
T  48163757 caaaaggaac-ttgttagtgctatactatatcgatccaaaaaagaatcactatatccaaa 48163699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 397 - 457
Target Start/End: Original strand, 16564416 - 16564476
Alignment:
Q  397 tatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatcggggcttca 457  Q
    |||||| |||| |||||||||| ||||| |||||||||||| ||||||||||||| |||||    
T  16564416 tatcggggcaggatacgcaggggatacggtacgtcatccattttgaagtatcgggacttca 16564476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 397 - 457
Target Start/End: Complemental strand, 16601246 - 16601186
Alignment:
Q  397 tatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatcggggcttca 457  Q
    |||||| |||| |||||||||| ||||| |||||||||||| ||||||||||||| |||||    
T  16601246 tatcggggcaggatacgcaggggatacggtacgtcatccattttgaagtatcgggacttca 16601186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 75
Target Start/End: Original strand, 1400069 - 1400128
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattatatccaaa 75  Q
    |||||||||||||||||||| |||||| |||||||| ||||||||| || ||||| ||||    
T  1400069 caaaaggaacattgttagtgttatactatatcgatctaaaaaagaaacactatattcaaa 1400128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 75
Target Start/End: Complemental strand, 27354270 - 27354212
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattatatccaaa 75  Q
    |||||||||| |||||||||||||| | |||||||||||||||||| || ||||||||||    
T  27354270 caaaaggaac-ttgttagtgctatattatatcgatccaaaaaagaatcactatatccaaa 27354212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 75
Target Start/End: Original strand, 27555135 - 27555193
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattatatccaaa 75  Q
    |||||||||| ||||||||| |||||| |||||||||||||||||| || ||||||||||    
T  27555135 caaaaggaac-ttgttagtgttatactatatcgatccaaaaaagaatcactatatccaaa 27555193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 75
Target Start/End: Complemental strand, 36661293 - 36661235
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattatatccaaa 75  Q
    |||||||||| ||||||||| |||||| ||||||||||||||||||||| | ||||||||    
T  36661293 caaaaggaac-ttgttagtgttatactttatcgatccaaaaaagaagcactgtatccaaa 36661235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 24956541 - 24956490
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattata 69  Q
    |||||| |||||||||||||||||||| |||||||||  |||||||||||||||    
T  24956541 caaaagaaacattgttagtgctatactatatcgatcc--aaaagaagcattata 24956490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 288 - 330
Target Start/End: Complemental strand, 36660640 - 36660598
Alignment:
Q  288 cacaagtatccgtgtgtatcaggacgtatcggaaaattatttt 330  Q
    |||||||||||||||||||| |||||||||||| |||||||||    
T  36660640 cacaagtatccgtgtgtatcgggacgtatcggataattatttt 36660598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 38064985 - 38064927
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaa-aaaagaagcattatatcca 73  Q
    |||||||||||||||||||| |||| | ||||||||||| |||||||||| ||||||||    
T  38064985 caaaaggaacattgttagtgttatattatatcgatccaaaaaaagaagcactatatcca 38064927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 24 - 69
Target Start/End: Original strand, 554721 - 554766
Alignment:
Q  24 acattgttagtgctatactgtatcgatccaaaaaagaagcattata 69  Q
    |||||||||||| |||||| ||||||||||||||||||||| ||||    
T  554721 acattgttagtgttatactatatcgatccaaaaaagaagcactata 554766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 288 - 333
Target Start/End: Complemental strand, 4291664 - 4291619
Alignment:
Q  288 cacaagtatccgtgtgtatcaggacgtatcggaaaattattttctt 333  Q
    ||||||||||| || ||||| |||||||||||||||||||||||||    
T  4291664 cacaagtatccatgcgtatcgggacgtatcggaaaattattttctt 4291619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 349 - 457
Target Start/End: Complemental strand, 24956356 - 24956247
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    ||||| || ||||||||||  ||||||||||||||||||||  |||  ||||  ||||  ||| | |||| ||||||||||||||| || ||||||||||    
T  24956356 ttaatcttcggatactctcttgatacgtatcggaaagtatcaggcatgtatcaatgcatgatatgtaggggatacgatacgtcatcaattttgaagtatc 24956257  T
Q  449 -ggggcttca 457  Q
     |||||||||    
T  24956256 tggggcttca 24956247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 36413661 - 36413609
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattata 69  Q
    |||||||||||||||||||| |||||| ||||||| ||||||||||||| ||||    
T  36413661 caaaaggaacattgttagtgttatactatatcgat-caaaaaagaagcactata 36413609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 397 - 457
Target Start/End: Original strand, 554938 - 554998
Alignment:
Q  397 tatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatcggggcttca 457  Q
    ||||||||||| |||| ||||| ||||||||||||||| || ||  |||||||||||||||    
T  554938 tatcggtgcaggatacacaggggatacgatacgtcatctattttagagtatcggggcttca 554998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 15 - 71
Target Start/End: Original strand, 9250111 - 9250167
Alignment:
Q  15 tcaaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattatatc 71  Q
    |||||| |||||||||||||| |||||| |||||||| |||||| ||||| ||||||    
T  9250111 tcaaaaagaacattgttagtgttatactatatcgatctaaaaaataagcactatatc 9250167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 15 - 71
Target Start/End: Original strand, 9283661 - 9283717
Alignment:
Q  15 tcaaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattatatc 71  Q
    |||||| |||||||||||||| |||||| |||||||| |||||| ||||| ||||||    
T  9283661 tcaaaaagaacattgttagtgttatactatatcgatctaaaaaataagcactatatc 9283717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 349 - 381
Target Start/End: Original strand, 16564389 - 16564421
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcgg 381  Q
    |||||||||||||||||||||||||||||||||    
T  16564389 ttaatatttggatactctcccgatacgtatcgg 16564421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 349 - 381
Target Start/End: Complemental strand, 16601273 - 16601241
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcgg 381  Q
    |||||||||||||||||||||||||||||||||    
T  16601273 ttaatatttggatactctcccgatacgtatcgg 16601241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 27 - 75
Target Start/End: Complemental strand, 16851122 - 16851074
Alignment:
Q  27 ttgttagtgctatactgtatcgatccaaaaaagaagcattatatccaaa 75  Q
    ||||||||| |||||| |||||||||||||||||| || ||||||||||    
T  16851122 ttgttagtgatatactatatcgatccaaaaaagaatcactatatccaaa 16851074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 15 - 71
Target Start/End: Complemental strand, 25969822 - 25969766
Alignment:
Q  15 tcaaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattatatc 71  Q
    |||||| |||||||||||||| |||||| |||||||| |||||| ||||| ||||||    
T  25969822 tcaaaaagaacattgttagtgttatactatatcgatctaaaaaataagcactatatc 25969766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 359 - 451
Target Start/End: Complemental strand, 44269820 - 44269729
Alignment:
Q  359 gatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatcggg 451  Q
    |||||||| | ||||||||||| ||||||||   ||||||| | ||||| ||| ||| || ||||  ||||||||||||||||||||||||||    
T  44269820 gatactctactgatacgtatcgaaaagtatcagacagatatag-tgcaggatatgcacgggataccgtacgtcatccatcttgaagtatcggg 44269729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 64
Target Start/End: Complemental strand, 44270034 - 44269986
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagca 64  Q
    |||||||||||||||||||| |||||| |||||||  ||||||||||||    
T  44270034 caaaaggaacattgttagtgttatactatatcgataaaaaaaagaagca 44269986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 64
Target Start/End: Complemental strand, 35160180 - 35160128
Alignment:
Q  16 caaaaggaacattgtta----gtgctatactgtatcgatccaaaaaagaagca 64  Q
    |||||||||||||||||    |||||||||| |||||||||||||||||||||    
T  35160180 caaaaggaacattgttaattagtgctatactatatcgatccaaaaaagaagca 35160128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 16 - 70
Target Start/End: Original strand, 15878225 - 15878279
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattatat 70  Q
    ||||| |||||||||||||| |||||| |||||||| ||||||||| || |||||    
T  15878225 caaaatgaacattgttagtgttatactatatcgatctaaaaaagaaacactatat 15878279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #85
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 16 - 75
Target Start/End: Original strand, 36763592 - 36763655
Alignment:
Q  16 caaaaggaacattgtta----gtgctatactgtatcgatccaaaaaagaagcattatatccaaa 75  Q
    |||||||||||||||||    ||| |||||| ||||||||||||||||| ||| ||||||||||    
T  36763592 caaaaggaacattgttaattagtgttatactatatcgatccaaaaaagaggcactatatccaaa 36763655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #86
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 288 - 333
Target Start/End: Original strand, 1043023 - 1043068
Alignment:
Q  288 cacaagtatccgtgtgtatcaggacgtatcggaaaattattttctt 333  Q
    |||||||||||||| ||||   ||||||||||||||||||||||||    
T  1043023 cacaagtatccgtgcgtattgagacgtatcggaaaattattttctt 1043068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #87
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 359 - 456
Target Start/End: Original strand, 18113959 - 18114055
Alignment:
Q  359 gatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatcggggcttc 456  Q
    |||||||||| ||||| |||| | |||||||  |||||||||||||||| ||||  || | ||| | |||||||||||| ||||| |||| |||||||    
T  18113959 gatactctcctgatacatatcaggaagtatcaggcagatatcggtgcaggatacatagaggatatggtacgtcatccattttgaa-tatctgggcttc 18114055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #88
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 458
Target Start/End: Complemental strand, 35136128 - 35136055
Alignment:
Q  385 gtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatcggggcttcat 458  Q
    |||||| |||||||||||||||  |||| ||||  ||||| ||||||| |||| |||||||||| | |||||||    
T  35136128 gtatcgggcagatatcggtgcaagatacccaggaaatacggtacgtcacccattttgaagtatccgagcttcat 35136055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #89
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 358 - 390
Target Start/End: Original strand, 15878374 - 15878406
Alignment:
Q  358 ggatactctcccgatacgtatcggaaagtatcg 390  Q
    ||||||||||| |||||||||||||||||||||    
T  15878374 ggatactctcctgatacgtatcggaaagtatcg 15878406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #90
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 358 - 390
Target Start/End: Original strand, 23970076 - 23970108
Alignment:
Q  358 ggatactctcccgatacgtatcggaaagtatcg 390  Q
    ||||||||||| |||||||||||||||||||||    
T  23970076 ggatactctcctgatacgtatcggaaagtatcg 23970108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #91
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 27 - 75
Target Start/End: Complemental strand, 40096477 - 40096429
Alignment:
Q  27 ttgttagtgctatactgtatcgatccaaaaaagaagcattatatccaaa 75  Q
    ||||||||| |||||| ||||||||||||||| || || ||||||||||    
T  40096477 ttgttagtgatatactatatcgatccaaaaaaaaatcactatatccaaa 40096429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 173; Significance: 8e-93; HSPs: 3)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 173; E-Value: 8e-93
Query Start/End: Original strand, 17 - 241
Target Start/End: Complemental strand, 5960 - 5736
Alignment:
Q  17 aaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattatatccaaagtggagggcaaccattttggaagaaaaagttgaaaccctaa 116  Q
    |||||||||||||||| || |||||| |||| ||| |||||||||||| ||||||||||||||| ||||||||||||| ||||||||||||||||||| |    
T  5960 aaaaggaacattgttaatgttatactatatcaatcaaaaaaagaagcactatatccaaagtggaaggcaaccattttgaaagaaaaagttgaaaccctca 5861  T
Q  117 ttttttaaaaaggggaagatgaaattgtttatgtggtatggtgtgggtcgtactggcaccaaagaaagataaaggaaatgtatatatattatagtaatat 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5860 ttttttaaaaaggggaagatgaaattgtttatgtggtatggtgtgggtcatactggcaccaaagaaagataaaggaaatgtatatatattatagtaatat 5761  T
Q  217 gatgattttattcttatggtttttt 241  Q
     ||| ||||||||||||| ||||||    
T  5760 aatgtttttattcttatgttttttt 5736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 349 - 455
Target Start/End: Complemental strand, 5620 - 5514
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||| ||||||||||| |||||||||| ||||| |||||| ||||| ||||||||||    
T  5620 ttaatatttggatactctcccgatacgtatcgggaagtatcgggcaggtatcggtgcaggatacgcaggggatacggtacgtcgtccattttgaagtatc 5521  T
Q  449 ggggctt 455  Q
    |||||||    
T  5520 ggggctt 5514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 288 - 333
Target Start/End: Complemental strand, 5678 - 5633
Alignment:
Q  288 cacaagtatccgtgtgtatcaggacgtatcggaaaattattttctt 333  Q
    |||||||||||||| ||||| | | |||||||||||||||||||||    
T  5678 cacaagtatccgtgcgtatcggaaagtatcggaaaattattttctt 5633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 169; Significance: 2e-90; HSPs: 82)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 16 - 241
Target Start/End: Complemental strand, 10657275 - 10657046
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattatatccaaagtggag----ggcaaccattttggaagaaaaagttgaaac 111  Q
    |||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||     ||| ||||||||||||||||||||||||||    
T  10657275 caaacggaacattgttagtgctatactatatcgatccaaaaaagaagcattatatccaaagttgaaagaaggcgaccattttggaagaaaaagttgaaac 10657176  T
Q  112 cctaattttttaaaaaggggaagatgaaattgtttatgtggtatggtgtgggtcgtactggcaccaaagaaagataaaggaaatgtatatatattatagt 211  Q
    |||||||||||| |||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10657175 cctaattttttagaaaggggaagatgaaattgtttctgtggtgtggtgtgggtcgtactggcaccaaagaaagataaaggaaatgtatatatattatagt 10657076  T
Q  212 aatatgatgattttattcttatggtttttt 241  Q
    ||||| ||| ||||||||||||| ||||||    
T  10657075 aatataatgtttttattcttatgttttttt 10657046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 16 - 225
Target Start/End: Original strand, 5985766 - 5985974
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattatatccaaagtggagggcaaccattttggaagaaaaagttgaaacccta 115  Q
    |||||||||||||| |||||||||||| |||||||  |||||| || || ||||||||||||||| ||| |||||||||||||||||||||||||||| |    
T  5985766 caaaaggaacattgctagtgctatactatatcgataaaaaaaaaaa-cactatatccaaagtggaaggcgaccattttggaagaaaaagttgaaacccca 5985864  T
Q  116 attttttaaaaaggggaagatgaaattgtttatgtggtatggtgtgggtcgtactggcaccaaagaaagataaaggaaatgtatatatattatagtaata 215  Q
    |||||| | ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  5985865 atttttaagaaaggggaagatgaaattgtttatgtggtatggtgtgagtcgtactggcaccaaagaaagataaaaaaaatgtatatatattatagtaata 5985964  T
Q  216 tgatgatttt 225  Q
    | ||| ||||    
T  5985965 taatgttttt 5985974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 71 - 233
Target Start/End: Original strand, 1639526 - 1639688
Alignment:
Q  71 ccaaagtggagggcaaccattttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaaattgtttatgtggtatggtgtgggtcgtact 170  Q
    |||||||||| ||| |||| ||||||||||||| ||||||||||||||| ||| |||||| |||||| |||||||| |||||| |||||||| |||||||    
T  1639526 ccaaagtggacggcgaccactttggaagaaaaaattgaaaccctaatttcttagaaagggaaagatgcaattgtttgtgtggtgtggtgtggatcgtact 1639625  T
Q  171 ggcaccaaagaaagataaaggaaatgtatatatattatagtaatatgatgattttattcttat 233  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||    
T  1639626 ggcaccaaagaaagataaaggaaatgtatatatattatagtaatataatgtttttattcttat 1639688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 71 - 233
Target Start/End: Complemental strand, 33830135 - 33829973
Alignment:
Q  71 ccaaagtggagggcaaccattttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaaattgtttatgtggtatggtgtgggtcgtact 170  Q
    |||||||||| ||| |||| ||||||||||||||||||||||||||||| ||| |||||| |||||| ||||| || |||||| ||||||||||||||||    
T  33830135 ccaaagtggacggcgaccactttggaagaaaaagttgaaaccctaatttcttagaaagggaaagatgcaattggttgtgtggtgtggtgtgggtcgtact 33830036  T
Q  171 ggcaccaaagaaagataaaggaaatgtatatatattatagtaatatgatgattttattcttat 233  Q
    | |||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||    
T  33830035 gacaccaaagaaagataaaggaaatgtatatatattatagtaatataatgtttttattcttat 33829973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 71 - 233
Target Start/End: Complemental strand, 12852484 - 12852322
Alignment:
Q  71 ccaaagtggagggcaaccattttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaaattgtttatgtggtatggtgtgggtcgtact 170  Q
    |||||||||| ||| |||| ||||||||||||||||||||||||||||| ||| |||||| |||||| ||||| || |||||| ||||||||||||||||    
T  12852484 ccaaagtggacggcgaccactttggaagaaaaagttgaaaccctaatttcttagaaagggaaagatgcaattggttgtgtggtgtggtgtgggtcgtact 12852385  T
Q  171 ggcaccaaagaaagataaaggaaatgtatatatattatagtaatatgatgattttattcttat 233  Q
     |||| |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||    
T  12852384 agcactaaagaaagataaaggaaatgtatatatattatagtaatataatgtttttattcttat 12852322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 71 - 233
Target Start/End: Original strand, 26794737 - 26794899
Alignment:
Q  71 ccaaagtggagggcaaccattttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaaattgtttatgtggtatggtgtgggtcgtact 170  Q
    |||||||||| ||| |||| ||||||||||||||||||||||||||||| ||| |||||| |||||| ||||| || |||||| ||||||||||||||||    
T  26794737 ccaaagtggacggcgaccactttggaagaaaaagttgaaaccctaatttcttagaaagggaaagatgcaattggttgtgtggtttggtgtgggtcgtact 26794836  T
Q  171 ggcaccaaagaaagataaaggaaatgtatatatattatagtaatatgatgattttattcttat 233  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||| ||| ||||||||||||    
T  26794837 ggcaccaaataaagataaaagaaatgtatatatattatagtaatataatgtttttattcttat 26794899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 71 - 233
Target Start/End: Complemental strand, 30918726 - 30918564
Alignment:
Q  71 ccaaagtggagggcaaccattttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaaattgtttatgtggtatggtgtgggtcgtact 170  Q
    |||||||||| ||| |||| || |||||||||||||||||||||||||| ||| |||||| |||||  ||||| || |||||| ||||||||||||||||    
T  30918726 ccaaagtggacggcgaccacttaggaagaaaaagttgaaaccctaatttcttagaaagggaaagatccaattggttgtgtggtgtggtgtgggtcgtact 30918627  T
Q  171 ggcaccaaagaaagataaaggaaatgtatatatattatagtaatatgatgattttattcttat 233  Q
    ||||||||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||    
T  30918626 ggcaccaaagaaagataaaagaaatgtatatatattatagtaatataatgtttttattcttat 30918564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 71 - 228
Target Start/End: Complemental strand, 9792670 - 9792518
Alignment:
Q  71 ccaaagtggagggcaaccattttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaaattgtttatgtggtatggtgtgggtcgtact 170  Q
    |||||||||| ||| |||| ||||||||||||||||| ||||||||||| ||| |||||| |||||| ||||   | ||||||     ||||||||||||    
T  9792670 ccaaagtggacggcgaccactttggaagaaaaagttggaaccctaatttcttagaaagggaaagatgcaattagctgtgtggt-----gtgggtcgtact 9792576  T
Q  171 ggcaccaaagaaagataaaggaaatgtatatatattatagtaatatgatgattttatt 228  Q
    | |||||||||||||||||||||||||||||||||||||||||||| ||| |||||||    
T  9792575 gacaccaaagaaagataaaggaaatgtatatatattatagtaatataatgtttttatt 9792518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 348 - 457
Target Start/End: Complemental strand, 10656929 - 10656820
Alignment:
Q  348 attaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtat 447  Q
    |||||||||||||||||||||||||||||||||  |||||||| |||| ||||||||||| |||||||||| |||||||||||||||||| || ||||||    
T  10656929 attaatatttggatactctcccgatacgtatcgagaagtatcgggcaggtatcggtgcaggatacgcaggggatacgatacgtcatccattttaaagtat 10656830  T
Q  448 cggggcttca 457  Q
    ||||||||||    
T  10656829 cggggcttca 10656820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 125 - 233
Target Start/End: Complemental strand, 7977559 - 7977451
Alignment:
Q  125 aaaggggaagatgaaattgtttatgtggtatggtgtgggtcgtactggcaccaaagaaagataaaggaaatgtatatatattatagtaatatgatgattt 224  Q
    |||||| |||||| ||||| || |||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| |||    
T  7977559 aaagggaaagatgcaattggttgtgtggtgtggtgtgggtcgtacgggcaccaaagaaagataaaggaaatgtatatatattatagtaatataatgtttt 7977460  T
Q  225 tattcttat 233  Q
    |||||||||    
T  7977459 tattcttat 7977451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 349 - 457
Target Start/End: Original strand, 30777532 - 30777640
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    |||||||||||||||||||| |||||||||||| |||||||| |||| ||||||||||| ||||||| || |||||||||||||||||| ||||||||||    
T  30777532 ttaatatttggatactctccggatacgtatcgggaagtatcgggcaggtatcggtgcaggatacgcaagggatacgatacgtcatccattttgaagtatc 30777631  T
Q  449 ggggcttca 457  Q
    |||||||||    
T  30777632 ggggcttca 30777640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 349 - 457
Target Start/End: Original strand, 32707841 - 32707949
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    |||||||||||||||||||| |||||||||||| |||||||| |||| ||||||||||| |||||||||| ||||| |||||||||||| ||||||||||    
T  32707841 ttaatatttggatactctccggatacgtatcgggaagtatcgggcaggtatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatc 32707940  T
Q  449 ggggcttca 457  Q
    |||||||||    
T  32707941 ggggcttca 32707949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 125 - 233
Target Start/End: Complemental strand, 32625205 - 32625097
Alignment:
Q  125 aaaggggaagatgaaattgtttatgtggtatggtgtgggtcgtactggcaccaaagaaagataaaggaaatgtatatatattatagtaatatgatgattt 224  Q
    |||||| |||||| ||||| || |||||| |||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||| ||| |||    
T  32625205 aaagggaaagatgcaattggttgtgtggtgtggtgtgggtcgtacgagcaccaaagaaagataaaggaaatgtatatatattatagtaatataatgtttt 32625106  T
Q  225 tattcttat 233  Q
    |||||||||    
T  32625105 tattcttat 32625097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 349 - 457
Target Start/End: Original strand, 39690773 - 39690881
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    |||||||||||||||||||| |||||||||| | |||||||| |||| ||||||||||| |||||||||| ||||| |||||||||||| ||||||||||    
T  39690773 ttaatatttggatactctccggatacgtatcaggaagtatcgggcaggtatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatc 39690872  T
Q  449 ggggcttca 457  Q
    |||||||||    
T  39690873 ggggcttca 39690881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 348 - 457
Target Start/End: Complemental strand, 30918487 - 30918378
Alignment:
Q  348 attaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtat 447  Q
    |||||||||| ||||||||||  ||||||||||| |||||||| |||| ||||||||||| |||||||||| |||| ||||||||||||| |||||||||    
T  30918487 attaatattttgatactctccgaatacgtatcgggaagtatcgggcaggtatcggtgcaggatacgcaggggatacaatacgtcatccattttgaagtat 30918388  T
Q  448 cggggcttca 457  Q
    ||||||||||    
T  30918387 cggggcttca 30918378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 349 - 457
Target Start/End: Original strand, 1639792 - 1639900
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    |||||||||||||||||| | |||||||||||| |||||||| |||| ||||||||||| |||||||||| ||||  |||||||||||| ||||||||||    
T  1639792 ttaatatttggatactcttcggatacgtatcgggaagtatcgggcaggtatcggtgcaggatacgcaggggatacagtacgtcatccattttgaagtatc 1639891  T
Q  449 ggggcttca 457  Q
    |||||||||    
T  1639892 ggggcttca 1639900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 349 - 457
Target Start/End: Complemental strand, 33829861 - 33829753
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    |||||||||||||||||||| |||||||||||| |||||||  |||  ||||||||||| |||||||||| ||||| |||||||||||| ||||||||||    
T  33829861 ttaatatttggatactctccggatacgtatcgggaagtatcaggcatgtatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatc 33829762  T
Q  449 ggggcttca 457  Q
    |||||||||    
T  33829761 ggggcttca 33829753  T

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Target: chr5; HSP #18
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 349 - 455
Target Start/End: Complemental strand, 11906326 - 11906220
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    |||||||| ||||||||||| |||||||||||| ||||||||  ||||||||||||||| |||||||||| |||| ||||||||||||| ||||||||||    
T  11906326 ttaatattcggatactctccggatacgtatcgggaagtatcggacagatatcggtgcaggatacgcagggaatacaatacgtcatccattttgaagtatc 11906227  T
Q  449 ggggctt 455  Q
    | |||||    
T  11906226 gaggctt 11906220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 155 - 233
Target Start/End: Original strand, 41392533 - 41392611
Alignment:
Q  155 tggtgtgggtcgtactggcaccaaagaaagataaaggaaatgtatatatattatagtaatatgatgattttattcttat 233  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||    
T  41392533 tggtgtgggtcgtactggcaccaaagaaagataaaggaaatgtatatatattatagtaatataatatttttattcttat 41392611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 349 - 457
Target Start/End: Complemental strand, 1795500 - 1795392
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    ||||| || ||||||||| | ||||||||||||||||||||| |||| ||||||||||| ||||| |||| ||||||||||||| |||| ||||||||||    
T  1795500 ttaatcttcggatactcttctgatacgtatcggaaagtatcgggcaggtatcggtgcaggatacggaggggatacgatacgtcaaccattttgaagtatc 1795401  T
Q  449 ggggcttca 457  Q
    |||||||||    
T  1795400 ggggcttca 1795392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 349 - 449
Target Start/End: Complemental strand, 22774662 - 22774562
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    ||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| ||| |||||| |||||||||| || |||| || |||||||    
T  22774662 ttaatatttggatactctctcgatacgtatcggaaagtatcgggcagatatcggtgcaggatatgcaggggatacgatacgccaaccattttaaagtatc 22774563  T
Q  449 g 449  Q
    |    
T  22774562 g 22774562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 148 - 230
Target Start/End: Original strand, 32707644 - 32707726
Alignment:
Q  148 tgtggtatggtgtgggtcgtactggcaccaaagaaagataaaggaaatgtatatatattatagtaatatgatgattttattct 230  Q
    |||||| |||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| ||| |||||||||    
T  32707644 tgtggtgtggtgtgggtcgtactagcaccaaaaaaagataaaggaaatgtatatatattatagtaatataatgtttttattct 32707726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 349 - 458
Target Start/End: Original strand, 41392722 - 41392831
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    ||||||||||||||||| || ||||| |||||| |||||||| |||| ||||||||||| |||||||||| ||||| |||||||||||| ||||||||||    
T  41392722 ttaatatttggatactccccggatacatatcgggaagtatcgggcaggtatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatc 41392821  T
Q  449 ggggcttcat 458  Q
     || ||||||    
T  41392822 tggacttcat 41392831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 349 - 457
Target Start/End: Complemental strand, 9792427 - 9792319
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    |||||||||||||||||||  |||||||||||| |||||||| |||| ||||| ||||| |||| ||||| ||||| |||||||||||| || |||||||    
T  9792427 ttaatatttggatactctctggatacgtatcgggaagtatcgggcaggtatcgatgcaggatacacaggggatacggtacgtcatccattttaaagtatc 9792328  T
Q  449 ggggcttca 457  Q
    |||||||||    
T  9792327 ggggcttca 9792319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 349 - 457
Target Start/End: Original strand, 30284617 - 30284725
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    ||||| || ||||||||||| |||||||||||| |||||||  |||| ||||||||||| |||||||||| ||||| |||||||||||| ||||||||||    
T  30284617 ttaatcttcggatactctcctgatacgtatcgggaagtatcaggcaggtatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatc 30284716  T
Q  449 ggggcttca 457  Q
    || ||||||    
T  30284717 ggagcttca 30284725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 349 - 455
Target Start/End: Complemental strand, 26691724 - 26691618
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    ||||| || ||||||||||  |||||||||||| |||||||   ||| |||||||||||||||||||||| ||||||||||||||| || ||||||||||    
T  26691724 ttaatcttcggatactctcttgatacgtatcgggaagtatcagacaggtatcggtgcagaatacgcaggggatacgatacgtcatctattttgaagtatc 26691625  T
Q  449 ggggctt 455  Q
    |||||||    
T  26691624 ggggctt 26691618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 349 - 455
Target Start/End: Complemental strand, 26961456 - 26961350
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    ||||| || ||||||||||  |||||||||||| |||||||   ||| |||||||||||||||||||||| ||||||||||||||| || ||||||||||    
T  26961456 ttaatcttcggatactctcttgatacgtatcgggaagtatcagacaggtatcggtgcagaatacgcaggggatacgatacgtcatctattttgaagtatc 26961357  T
Q  449 ggggctt 455  Q
    |||||||    
T  26961356 ggggctt 26961350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 349 - 457
Target Start/End: Complemental strand, 26716381 - 26716273
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    ||||| || ||||||||| | |||||||||||| |||||||  |||| |||||||| || |||||||||| |||||||||||||||||| ||||||||||    
T  26716381 ttaatcttcggatactcttctgatacgtatcgggaagtatcaggcaggtatcggtgtaggatacgcaggggatacgatacgtcatccattttgaagtatc 26716282  T
Q  449 ggggcttca 457  Q
    | |||||||    
T  26716281 gaggcttca 26716273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 349 - 457
Target Start/End: Complemental strand, 26986121 - 26986013
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    ||||| || ||||||||| | |||||||||||| |||||||  |||| |||||||| || |||||||||| |||||||||||||||||| ||||||||||    
T  26986121 ttaatcttcggatactcttctgatacgtatcgggaagtatcaggcaggtatcggtgtaggatacgcaggggatacgatacgtcatccattttgaagtatc 26986022  T
Q  449 ggggcttca 457  Q
    | |||||||    
T  26986021 gaggcttca 26986013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 350 - 457
Target Start/End: Original strand, 32728720 - 32728827
Alignment:
Q  350 taatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatcg 449  Q
    ||||||||||||||||||| |||||||||||| |||||||| |||| ||||| ||||  |||||||||| |||| |||| ||||| || |||||||||||    
T  32728720 taatatttggatactctccggatacgtatcgggaagtatcgggcaggtatcgatgcaagatacgcaggggatacaatacatcatcaattttgaagtatcg 32728819  T
Q  450 gggcttca 457  Q
    | ||||||    
T  32728820 gagcttca 32728827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 359 - 447
Target Start/End: Complemental strand, 15066236 - 15066148
Alignment:
Q  359 gatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtat 447  Q
    |||||||| ||||||||||||||||| ||||| ||||||||||||||||||||| || || ||||||||| ||||| || |||||||||    
T  15066236 gatactcttccgatacgtatcggaaaatatcgggcagatatcggtgcagaatacacatgggatacgatacatcatctattttgaagtat 15066148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 349 - 457
Target Start/End: Complemental strand, 32624985 - 32624877
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    |||||||||||||||||| |  ||||||||||| |||||||| |||| ||||| ||||  |||| ||||| ||||| |||||||||||| ||||| ||||    
T  32624985 ttaatatttggatactcttcgaatacgtatcgggaagtatcgggcaggtatcgatgcaagatacacaggggatacggtacgtcatccattttgaaatatc 32624886  T
Q  449 ggggcttca 457  Q
    |||||||||    
T  32624885 ggggcttca 32624877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 125 - 202
Target Start/End: Original strand, 39690267 - 39690344
Alignment:
Q  125 aaaggggaagatgaaattgtttatgtggtatggtgtgggtcgtactggcaccaaagaaagataaaggaaatgtatata 202  Q
    |||||| |||||| ||||| || |||||| ||||||||||||||| |||||||||||||||||||| |||||||||||    
T  39690267 aaagggaaagatgcaattggttgtgtggtgtggtgtgggtcgtaccggcaccaaagaaagataaagaaaatgtatata 39690344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 348 - 448
Target Start/End: Complemental strand, 14836490 - 14836390
Alignment:
Q  348 attaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtat 447  Q
    ||||||||| ||||||||| | ||||||||||||||| |||||  || |||||| ||||| |||||||||| |||| |||||||| |||| |||||||||    
T  14836490 attaatattcggatactcttctgatacgtatcggaaaatatcggacaaatatcgatgcaggatacgcaggggatacaatacgtcaaccattttgaagtat 14836391  T
Q  448 c 448  Q
    |    
T  14836390 c 14836390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 349 - 456
Target Start/End: Original strand, 17138264 - 17138370
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    ||||| || ||||| ||||| |||||||||||| |||||||  |||  ||||||||||| |||||||||| |||| |||||||||| || ||||||||||    
T  17138264 ttaatcttcggatattctcctgatacgtatcgggaagtatcaggcaattatcggtgcaggatacgcaggggatac-atacgtcatctattttgaagtatc 17138362  T
Q  449 ggggcttc 456  Q
    ||||||||    
T  17138363 ggggcttc 17138370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 16 - 75
Target Start/End: Complemental strand, 22738154 - 22738095
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattatatccaaa 75  Q
    |||||||||||||||||||| |||||| ||||||||||||||||||||| ||||||||||    
T  22738154 caaaaggaacattgttagtgttatactatatcgatccaaaaaagaagcactatatccaaa 22738095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 16 - 75
Target Start/End: Complemental strand, 26691934 - 26691875
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattatatccaaa 75  Q
    |||||||||||||||||||| |||||| ||||||||||||||||||||| ||||||||||    
T  26691934 caaaaggaacattgttagtgttatactctatcgatccaaaaaagaagcactatatccaaa 26691875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 16 - 75
Target Start/End: Complemental strand, 26961666 - 26961607
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattatatccaaa 75  Q
    |||||||||||||||||||| |||||| ||||||||||||||||||||| ||||||||||    
T  26961666 caaaaggaacattgttagtgttatactctatcgatccaaaaaagaagcactatatccaaa 26961607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 349 - 457
Target Start/End: Original strand, 26795014 - 26795111
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    |||||||||||||||||||| ||||||||||||||||||||           ||||||| |||||||||| |||||||||||||||||| || |||||||    
T  26795014 ttaatatttggatactctccggatacgtatcggaaagtatc-----------ggtgcaggatacgcaggggatacgatacgtcatccattttaaagtatc 26795102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 18 - 75
Target Start/End: Complemental strand, 15066506 - 15066449
Alignment:
Q  18 aaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattatatccaaa 75  Q
    |||||||||||||||||| |||||| ||| ||||||||||||||||||||||||||||    
T  15066506 aaaggaacattgttagtgttatactatattgatccaaaaaagaagcattatatccaaa 15066449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 349 - 458
Target Start/End: Complemental strand, 21251573 - 21251464
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    |||||||| ||||||||||| ||||||||||||||||||||   ||||||| ||||||||||| | |||  ||||| |||||||||||| || | |||||    
T  21251573 ttaatattcggatactctcctgatacgtatcggaaagtatcagacagatattggtgcagaataagtaggagatacggtacgtcatccattttaatgtatc 21251474  T
Q  449 ggggcttcat 458  Q
     || ||||||    
T  21251473 aggacttcat 21251464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 349 - 457
Target Start/End: Original strand, 5612452 - 5612560
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    ||||| || ||||||||||| | |||||||| |||||||||| |||| ||||  ||||| || | ||| | |||||||||||||||||| ||||||||||    
T  5612452 ttaatcttcggatactctcctggtacgtatcagaaagtatcgggcagttatcaatgcaggatgcacagagaatacgatacgtcatccattttgaagtatc 5612551  T
Q  449 ggggcttca 457  Q
     ||||||||    
T  5612552 tgggcttca 5612560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 349 - 441
Target Start/End: Original strand, 5986078 - 5986170
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttg 441  Q
    ||||||||||||||||||||| ||||||||| ||||||||||  || |||||| ||||| |||||||||  |||| |||||| |||| |||||    
T  5986078 ttaatatttggatactctcccaatacgtatcagaaagtatcggacatatatcgatgcaggatacgcaggagataccatacgttatccttcttg 5986170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 397 - 457
Target Start/End: Complemental strand, 12852179 - 12852119
Alignment:
Q  397 tatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatcggggcttca 457  Q
    ||||||||||| |||||||||| ||||| |||||||||||| |||||||||||||||||||    
T  12852179 tatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttca 12852119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 15 - 75
Target Start/End: Complemental strand, 27085667 - 27085607
Alignment:
Q  15 tcaaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattatatccaaa 75  Q
    |||||| ||||||||||||||||||| | ||||||||||||||||||||| ||||||||||    
T  27085667 tcaaaatgaacattgttagtgctatattatatcgatccaaaaaagaagcactatatccaaa 27085607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 16 - 75
Target Start/End: Complemental strand, 3701381 - 3701322
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattatatccaaa 75  Q
    |||||||||||||||||||| |||||| ||||||||||||||||||||| | ||||||||    
T  3701381 caaaaggaacattgttagtgttatactatatcgatccaaaaaagaagcactgtatccaaa 3701322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 16 - 75
Target Start/End: Original strand, 17138055 - 17138114
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattatatccaaa 75  Q
    ||||||||||||||||||||||||| | |||| |||||||||||||||| ||||||||||    
T  17138055 caaaaggaacattgttagtgctatattatatcaatccaaaaaagaagcactatatccaaa 17138114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 360 - 418
Target Start/End: Complemental strand, 9653862 - 9653804
Alignment:
Q  360 atactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcaggg 418  Q
    ||||||| |||||||||||||| |||||||| ||| |||||||||||||||||||||||    
T  9653862 atactcttccgatacgtatcgggaagtatcgggcaaatatcggtgcagaatacgcaggg 9653804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 1795688 - 1795635
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattata 69  Q
    |||||| |||||||||||||||||||| ||||||||||||||||||||| ||||    
T  1795688 caaaagaaacattgttagtgctatactatatcgatccaaaaaagaagcactata 1795635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 349 - 458
Target Start/End: Original strand, 3934798 - 3934907
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    ||||| || ||||||||||| |||||||||||| |||||||  | || ||||||||| | |||||||||| |||  ||||||||||||| || ||||||     
T  3934798 ttaatcttcggatactctcctgatacgtatcggtaagtatcaggtaggtatcggtgcgggatacgcaggggatataatacgtcatccattttaaagtatg 3934897  T
Q  449 ggggcttcat 458  Q
    | ||||||||    
T  3934898 gaggcttcat 3934907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 26716568 - 26716515
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattata 69  Q
    ||||| ||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  26716568 caaaatgaacattgttagtgctatactatatcgatccaaaaaagaagcactata 26716515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 26986308 - 26986255
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattata 69  Q
    ||||| ||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  26986308 caaaatgaacattgttagtgctatactatatcgatccaaaaaagaagcactata 26986255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 27 - 75
Target Start/End: Complemental strand, 12852930 - 12852882
Alignment:
Q  27 ttgttagtgctatactgtatcgatccaaaaaagaagcattatatccaaa 75  Q
    |||||||||||||||| |||||||||||||||||| |||||||||||||    
T  12852930 ttgttagtgctatactatatcgatccaaaaaagaatcattatatccaaa 12852882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 349 - 457
Target Start/End: Original strand, 6243179 - 6243276
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    |||||||| ||||||||||| ||||||||||||||||||||           ||||||| |||||||| | |||| ||||||||||||| ||||||||||    
T  6243179 ttaatattcggatactctccggatacgtatcggaaagtatc-----------ggtgcaggatacgcagaggatacaatacgtcatccattttgaagtatc 6243267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 24 - 66
Target Start/End: Complemental strand, 7629333 - 7629291
Alignment:
Q  24 acattgttagtgctatactgtatcgatccaaaaaagaagcatt 66  Q
    ||||||||||||||||||| |||||||||||||||||||||||    
T  7629333 acattgttagtgctatactatatcgatccaaaaaagaagcatt 7629291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 359 - 457
Target Start/End: Original strand, 35746271 - 35746369
Alignment:
Q  359 gatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatcggggcttca 457  Q
    |||||||||| |||||||||||||||||||   |||| ||||| ||||  ||||| |||  |||| |||||||||| || |||||||||||| ||||||    
T  35746271 gatactctcctgatacgtatcggaaagtattaggcaggtatcgatgcatgatacgtaggagatacaatacgtcatctattttgaagtatcggagcttca 35746369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 16 - 69
Target Start/End: Original strand, 3934610 - 3934663
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattata 69  Q
    |||||| ||||||||||||| |||| | ||||||||||||||||||||||||||    
T  3934610 caaaagaaacattgttagtgttatattatatcgatccaaaaaagaagcattata 3934663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 22 - 75
Target Start/End: Original strand, 5612248 - 5612301
Alignment:
Q  22 gaacattgttagtgctatactgtatcgatccaaaaaagaagcattatatccaaa 75  Q
    ||||||||||||||||||||| |||| ||| |||||||||||| ||||||||||    
T  5612248 gaacattgttagtgctatactatatcaatcaaaaaaagaagcactatatccaaa 5612301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 16 - 61
Target Start/End: Complemental strand, 21251779 - 21251734
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaa 61  Q
    ||||||||||||||||| ||||||||| ||||||||||||||||||    
T  21251779 caaaaggaacattgttaatgctatactatatcgatccaaaaaagaa 21251734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 27938454 - 27938401
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattata 69  Q
    ||||||||||| ||||||||||| ||| ||||||||||||||||||||| ||||    
T  27938454 caaaaggaacactgttagtgctacactatatcgatccaaaaaagaagcactata 27938401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 348 - 457
Target Start/End: Complemental strand, 34032478 - 34032369
Alignment:
Q  348 attaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtat 447  Q
    |||||| || ||||||||||| |||||||||||| ||||||| ||||| |||||||  |  ||||||| || || |||||| ||||| || |||||||||    
T  34032478 attaatcttcggatactctcctgatacgtatcgggaagtatcaagcaggtatcggtagatgatacgcaagggattcgatacatcatctattttgaagtat 34032379  T
Q  448 cggggcttca 457  Q
    |  |||||||    
T  34032378 caaggcttca 34032369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 359 - 448
Target Start/End: Complemental strand, 41233477 - 41233388
Alignment:
Q  359 gatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    |||||||||| |||||||||||| |||||||   ||  ||||| ||||| ||||| |||  |||||||||||||||||| ||||||||||    
T  41233477 gatactctcctgatacgtatcgggaagtatcagacatgtatcgttgcaggatacgtaggaaatacgatacgtcatccattttgaagtatc 41233388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 16 - 69
Target Start/End: Original strand, 43357582 - 43357635
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattata 69  Q
    |||||| |||||||||||||||||||| ||||||| ||||||||||||| ||||    
T  43357582 caaaagaaacattgttagtgctatactatatcgattcaaaaaagaagcactata 43357635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 75
Target Start/End: Original strand, 39690019 - 39690077
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattatatccaaa 75  Q
    |||||||||| ||||||||| |||||| |||||||||||||||||| || ||||||||||    
T  39690019 caaaaggaac-ttgttagtgttatactatatcgatccaaaaaagaatcactatatccaaa 39690077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 349 - 415
Target Start/End: Complemental strand, 1920944 - 1920878
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgca 415  Q
    ||||| || |||||||||||| ||||||||||| |||||||  |||||||||||||||  |||||||    
T  1920944 ttaatcttcggatactctcccaatacgtatcgggaagtatcatgcagatatcggtgcatgatacgca 1920878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 27 - 72
Target Start/End: Original strand, 1639088 - 1639133
Alignment:
Q  27 ttgttagtgctatactgtatcgatccaaaaaagaagcattatatcc 72  Q
    |||||||||||||| | ||||||||||||||||||||| |||||||    
T  1639088 ttgttagtgctatattatatcgatccaaaaaagaagcactatatcc 1639133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 409 - 458
Target Start/End: Complemental strand, 7629118 - 7629069
Alignment:
Q  409 atacgcagggtatacgatacgtcatccatcttgaagtatcggggcttcat 458  Q
    |||||||||| |||||||||||||||||| |||| ||||| |||||||||    
T  7629118 atacgcaggggatacgatacgtcatccattttgaggtatcagggcttcat 7629069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 14836627 - 14836574
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattata 69  Q
    |||||| ||| ||||||||| |||||| ||||||||||||||||||||| ||||    
T  14836627 caaaagaaactttgttagtgatatactatatcgatccaaaaaagaagcactata 14836574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 30 - 75
Target Start/End: Original strand, 18001781 - 18001826
Alignment:
Q  30 ttagtgctatactgtatcgatccaaaaaagaagcattatatccaaa 75  Q
    ||||||||||||| ||||||||||||||||||||| ||||| ||||    
T  18001781 ttagtgctatactttatcgatccaaaaaagaagcactatattcaaa 18001826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 25749901 - 25749848
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattata 69  Q
    ||||| ||||||||||||||||||| |  |||||||||||||||||||| ||||    
T  25749901 caaaatgaacattgttagtgctatattacatcgatccaaaaaagaagcactata 25749848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 27 - 75
Target Start/End: Complemental strand, 9793116 - 9793068
Alignment:
Q  27 ttgttagtgctatactgtatcgatccaaaaaagaagcattatatccaaa 75  Q
    ||||||||| |||||| |||||||||||||||||| || ||||||||||    
T  9793116 ttgttagtgatatactatatcgatccaaaaaagaatcactatatccaaa 9793068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 15 - 71
Target Start/End: Original strand, 30777210 - 30777266
Alignment:
Q  15 tcaaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattatatc 71  Q
    |||||| |||||||||||||| |||||| |||||||| |||||| ||||| ||||||    
T  30777210 tcaaaaagaacattgttagtgttatactatatcgatctaaaaaataagcactatatc 30777266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 71
Target Start/End: Complemental strand, 11907608 - 11907553
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattatatc 71  Q
    ||||||| |||||||| ||| |||| | ||||||||||||||||||||| ||||||    
T  11907608 caaaaggtacattgttggtgttataatatatcgatccaaaaaagaagcactatatc 11907553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 75
Target Start/End: Original strand, 26794290 - 26794348
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattatatccaaa 75  Q
    |||||||||| ||||||||| ||||||  ||||||||||||||||| || ||||||||||    
T  26794290 caaaaggaac-ttgttagtgttatactaaatcgatccaaaaaagaatcactatatccaaa 26794348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 288 - 330
Target Start/End: Original strand, 1639735 - 1639777
Alignment:
Q  288 cacaagtatccgtgtgtatcaggacgtatcggaaaattatttt 330  Q
    |||||||||||||| ||||| |||||||||||| |||||||||    
T  1639735 cacaagtatccgtgcgtatcgggacgtatcggataattatttt 1639777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 349 - 451
Target Start/End: Complemental strand, 5722095 - 5721993
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    ||||| || ||||||| ||| |||| |||| |  |||||||| |||  |||| |||||| |||||||||| ||||||||||||||| || || || ||||    
T  5722095 ttaatcttcggatactttcctgatatgtattgagaagtatcgggcatgtatcagtgcaggatacgcaggggatacgatacgtcatcaattttaaaatatc 5721996  T
Q  449 ggg 451  Q
    |||    
T  5721995 ggg 5721993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #77
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 23 - 73
Target Start/End: Complemental strand, 5722287 - 5722237
Alignment:
Q  23 aacattgttagtgctatactgtatcgatccaaaaaagaagcattatatcca 73  Q
    ||||||||||||| ||| || ||||||| ||||||||||||| ||||||||    
T  5722287 aacattgttagtgttatcctatatcgattcaaaaaagaagcactatatcca 5722237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #78
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 16 - 58
Target Start/End: Original strand, 30284408 - 30284450
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaa 58  Q
    ||||| |||||||||||||| |||||| |||||||||||||||    
T  30284408 caaaatgaacattgttagtgttatactatatcgatccaaaaaa 30284450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #79
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 358 - 403
Target Start/End: Complemental strand, 27085463 - 27085418
Alignment:
Q  358 ggatactctcccgatacgtatcggaaagtatcgagcagatatcggt 403  Q
    ||||||||||  ||||||||||||||||||||  ||||||||||||    
T  27085463 ggatactctcttgatacgtatcggaaagtatcatgcagatatcggt 27085418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #80
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 70
Target Start/End: Complemental strand, 34032666 - 34032625
Alignment:
Q  29 gttagtgctatactgtatcgatccaaaaaagaagcattatat 70  Q
    |||||||||||||| ||||||||||||||| ||||| |||||    
T  34032666 gttagtgctatactttatcgatccaaaaaataagcactatat 34032625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #81
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 359 - 407
Target Start/End: Complemental strand, 21317256 - 21317208
Alignment:
Q  359 gatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcag 407  Q
    |||||||||| |||||||||||||  ||||||||||  |||||||||||    
T  21317256 gatactctccggatacgtatcggagtgtatcgagcaagtatcggtgcag 21317208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #82
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 386 - 450
Target Start/End: Complemental strand, 27938234 - 27938170
Alignment:
Q  386 tatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatcgg 450  Q
    |||||||||  ||||||||||  ||||||| |  |||| ||||||||||||| ||||||||||||    
T  27938234 tatcgagcatgtatcggtgcatgatacgcatgagatacaatacgtcatccattttgaagtatcgg 27938170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 167; Significance: 3e-89; HSPs: 43)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 16 - 234
Target Start/End: Original strand, 32130346 - 32130564
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattatatccaaagtggagggcaaccattttggaagaaaaagttgaaacccta 115  Q
    ||||||||||||||||| ||||||||| ||| ||||||||||||||||| ||||||||||||||| ||| || ||||||||| |||||||||||||||||    
T  32130346 caaaaggaacattgttaatgctatactatattgatccaaaaaagaagcactatatccaaagtggaaggcgactattttggaaaaaaaagttgaaacccta 32130445  T
Q  116 attttttaaaaaggggaagatgaaattgtttatgtggtatggtgtgggtcgtactggcaccaaagaaagataaaggaaatgtatatatattatagtaata 215  Q
    ||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32130446 attttttaaaaaggggaagatgaaattgtttctgtggtatggtgtgtgtcgtactggcaccaaagaaagataaaggaaatgtatatatattatagtaata 32130545  T
Q  216 tgatgattttattcttatg 234  Q
    | ||  |||||||||||||    
T  32130546 taatatttttattcttatg 32130564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 158; E-Value: 7e-84
Query Start/End: Original strand, 16 - 205
Target Start/End: Original strand, 31740503 - 31740692
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattatatccaaagtggagggcaaccattttggaagaaaaagttgaaacccta 115  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  31740503 caaaaggaacattgttagtgctatactatatcgatccaaaaaagaagcactatatccaaagtggaaggcgaccattttggaagaaaaagttgaaacccta 31740602  T
Q  116 attttttaaaaaggggaagatgaaattgtttatgtggtatggtgtgggtcgtactggcaccaaagaaagataaaggaaatgtatatatat 205  Q
    |||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||| |||||||    
T  31740603 attttttagaaaggggaagatgaaattgtttatgtggtgtggtgtgggtcgtactggcaccaaagaaagataaagaaaatgtgtatatat 31740692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 71 - 233
Target Start/End: Original strand, 1036560 - 1036722
Alignment:
Q  71 ccaaagtggagggcaaccattttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaaattgtttatgtggtatggtgtgggtcgtact 170  Q
    |||||||||| ||| |||| ||||||||||||||||||||||||||||| ||| |||||| |||||| ||||| || |||||| ||||||||||||||||    
T  1036560 ccaaagtggacggcgaccactttggaagaaaaagttgaaaccctaatttcttagaaagggaaagatgcaattggttgtgtggtgtggtgtgggtcgtact 1036659  T
Q  171 ggcaccaaagaaagataaaggaaatgtatatatattatagtaatatgatgattttattcttat 233  Q
    ||||||||||||||||||||||||| |||||||||||||||||||| ||| ||||||||||||    
T  1036660 ggcaccaaagaaagataaaggaaatatatatatattatagtaatataatgtttttattcttat 1036722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 86 - 233
Target Start/End: Original strand, 7188539 - 7188686
Alignment:
Q  86 accattttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaaattgtttatgtggtatggtgtgggtcgtactggcaccaaagaaaga 185  Q
    |||| ||||||||||||||||||||||||||||| |||  ||||| |||||| ||||| || |||||| |||||||||||||||||||||||||||||||    
T  7188539 accactttggaagaaaaagttgaaaccctaatttcttagtaagggaaagatgcaattggttgtgtggtgtggtgtgggtcgtactggcaccaaagaaaga 7188638  T
Q  186 taaaggaaatgtatatatattatagtaatatgatgattttattcttat 233  Q
    ||||| ||||||||||||||||||||||||| ||| ||||||||||||    
T  7188639 taaagaaaatgtatatatattatagtaatataatgtttttattcttat 7188686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 349 - 457
Target Start/End: Original strand, 1036836 - 1036944
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    ||||||||| |||||||||| ||||||||||||||||||||| |||| ||||||||||| |||||||||| ||||| |||||||||||| ||||||||||    
T  1036836 ttaatatttagatactctccggatacgtatcggaaagtatcgggcaggtatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatc 1036935  T
Q  449 ggggcttca 457  Q
    |||||||||    
T  1036936 ggggcttca 1036944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 349 - 457
Target Start/End: Complemental strand, 3212585 - 3212477
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    |||||||||||||||||||| |||||||||||| |||||||| |||||||||||||||| |||| || || |||||||||||||||||| ||||||||||    
T  3212585 ttaatatttggatactctccggatacgtatcgggaagtatcgggcagatatcggtgcaggatacacaaggaatacgatacgtcatccattttgaagtatc 3212486  T
Q  449 ggggcttca 457  Q
    |||||||||    
T  3212485 ggggcttca 3212477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 148 - 233
Target Start/End: Complemental strand, 8357256 - 8357171
Alignment:
Q  148 tgtggtatggtgtgggtcgtactggcaccaaagaaagataaaggaaatgtatatatattatagtaatatgatgattttattcttat 233  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||    
T  8357256 tgtggtgtggtgtgggtcgtactggcaccaaagaaagataaaggaaatgtatatatattatagtaatataatgtttttattcttat 8357171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 349 - 447
Target Start/End: Original strand, 31195879 - 31195977
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtat 447  Q
    |||||||||||||||||||| |||||||||||| |||||||| |||| ||||||||||| |||||||||| |||||||||||||||||| |||||||||    
T  31195879 ttaatatttggatactctccagatacgtatcgggaagtatcgggcaggtatcggtgcaggatacgcaggggatacgatacgtcatccattttgaagtat 31195977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 349 - 457
Target Start/End: Complemental strand, 27084093 - 27083985
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    ||||| ||||||||||||||  |||||||| || |||||| |||||| ||||||||||| |||||||||| |||||||||||||||||| ||||||||||    
T  27084093 ttaatctttggatactctccttatacgtattgggaagtattgagcaggtatcggtgcaggatacgcaggggatacgatacgtcatccattttgaagtatc 27083994  T
Q  449 ggggcttca 457  Q
    |||||||||    
T  27083993 ggggcttca 27083985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 349 - 457
Target Start/End: Complemental strand, 234414 - 234306
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    ||||| || ||||||||| | ||||||||||||||||||||| |||| ||||||||||| |||||||||  ||||||||||||| |||| ||||||||||    
T  234414 ttaatcttcggatactcttctgatacgtatcggaaagtatcgggcaggtatcggtgcaggatacgcaggagatacgatacgtcaaccattttgaagtatc 234315  T
Q  449 ggggcttca 457  Q
    |||||||||    
T  234314 ggggcttca 234306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 288 - 457
Target Start/End: Original strand, 32130611 - 32130777
Alignment:
Q  288 cacaagtatccgtgtgtatcaggacgtatcggaaaattattttcttcnnnnnnnnnnnntattaatatttggatactctcccgatacgtatcggaaagta 387  Q
    |||||||||||||| ||||| |||||||||||||||||||||||||               |||||||||||||||||||| |||||||||||| || ||    
T  32130611 cacaagtatccgtgcgtatcgggacgtatcggaaaattattttcttaaaaaataaaat---ttaatatttggatactctcctgatacgtatcgggaaata 32130707  T
Q  388 tcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatcggggcttca 457  Q
    |||| ||| |||| |||||| |||||||||| ||||| |||||||| ||| || ||||||||||||||||    
T  32130708 tcgaacaggtatcagtgcaggatacgcaggggatacggtacgtcattcattttaaagtatcggggcttca 32130777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 349 - 458
Target Start/End: Complemental strand, 8357066 - 8356957
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    |||||||||||||||||| | |||||||||||| ||||||||  ||| ||||||||||| |||||||||| ||||| |||||||||||| ||||||||||    
T  8357066 ttaatatttggatactcttcggatacgtatcgggaagtatcggacaggtatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatc 8356967  T
Q  449 ggggcttcat 458  Q
     || ||||||    
T  8356966 aggacttcat 8356957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 360 - 448
Target Start/End: Complemental strand, 32018074 - 32017986
Alignment:
Q  360 atactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    ||||||| | ||||||||| ||||||||||| |||||||||||||||| |||||||||| |||||||||||||||||| ||||||||||    
T  32018074 atactctacggatacgtataggaaagtatcgggcagatatcggtgcaggatacgcaggggatacgatacgtcatccattttgaagtatc 32017986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 349 - 457
Target Start/End: Original strand, 7188789 - 7188894
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    |||||||||||||||||||| |||||||||| | |||||||  |||| ||||||||||| |||||||||| ||||| ||   ||||||| ||||||||||    
T  7188789 ttaatatttggatactctccggatacgtatcaggaagtatcaggcaggtatcggtgcaggatacgcaggggatacggta---catccattttgaagtatc 7188885  T
Q  449 ggggcttca 457  Q
    |||||||||    
T  7188886 ggggcttca 7188894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 371 - 457
Target Start/End: Complemental strand, 26327241 - 26327155
Alignment:
Q  371 atacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatcggggcttca 457  Q
    ||||||||||| |||||||| |||| ||||||||||| |||| ||||  |||||||||||||||||| |||||||||||||||||||    
T  26327241 atacgtatcgggaagtatcgggcaggtatcggtgcaggatacacaggagatacgatacgtcatccattttgaagtatcggggcttca 26327155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 16 - 74
Target Start/End: Original strand, 10894320 - 10894378
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattatatccaa 74  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||    
T  10894320 caaaaggaacattgttagtgctatactatatcgatccaaaaaagaagcactatatccaa 10894378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 349 - 458
Target Start/End: Complemental strand, 19128261 - 19128152
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    ||||| || ||||||||| | ||||||||||||||||||||| || | ||| ||||||| |||| ||||| ||||||||||||| |||| || ||||||     
T  19128261 ttaatcttcggatactcttctgatacgtatcggaaagtatcgggcgggtattggtgcaggatacacaggggatacgatacgtcaaccattttaaagtatt 19128162  T
Q  449 ggggcttcat 458  Q
    || |||||||    
T  19128161 ggagcttcat 19128152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 349 - 457
Target Start/End: Original strand, 25834506 - 25834614
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    |||||||||||||||| ||| |||||||||||  || ||||  |||  |||| |||||| ||||||| || |||||||||||||||||  ||||||||||    
T  25834506 ttaatatttggatactgtcctgatacgtatcgagaaatatcaggcatgtatcagtgcaggatacgcacgggatacgatacgtcatccaatttgaagtatc 25834605  T
Q  449 ggggcttca 457  Q
    |||| ||||    
T  25834606 ggggtttca 25834614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 360 - 457
Target Start/End: Complemental strand, 3299238 - 3299141
Alignment:
Q  360 atactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatcggggcttca 457  Q
    ||||||||| ||||||||||||||| ||||  |||| ||||||||||| ||| |||| | ||||| ||| ||||| || |||||||||| ||||||||    
T  3299238 atactctccagatacgtatcggaaaatatcatgcaggtatcggtgcaggatatgcagaggatacggtacatcatctattttgaagtatcagggcttca 3299141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 349 - 458
Target Start/End: Original strand, 13607795 - 13607904
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    ||||| || ||||||||||| |||||||||| |||| |||   |||| |||| |||||| ||| |||| | |||||||||||||||||| ||||||||||    
T  13607795 ttaatcttcggatactctcctgatacgtatcagaaattattaggcaggtatcagtgcaggatatgcagaggatacgatacgtcatccattttgaagtatc 13607894  T
Q  449 ggggcttcat 458  Q
     ||| |||||    
T  13607895 agggattcat 13607904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 19128448 - 19128395
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattata 69  Q
    |||||| |||||||||||||||||||| ||||||||||||||||||||| ||||    
T  19128448 caaaagaaacattgttagtgctatactatatcgatccaaaaaagaagcactata 19128395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 16 - 61
Target Start/End: Original strand, 22988927 - 22988972
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaa 61  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||    
T  22988927 caaaaggaacattgttagtgctatactatatcgatccaaaaaagaa 22988972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 16 - 61
Target Start/End: Complemental strand, 23799469 - 23799424
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaa 61  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||    
T  23799469 caaaaggaacattgttagtgctatactatatcgatccaaaaaagaa 23799424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 349 - 457
Target Start/End: Original strand, 6708051 - 6708159
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    ||||| || ||||||||||| ||||| ||| ||||||||||  | || ||||||||||  |||| ||||| |||| ||| ||||||||| || |||||||    
T  6708051 ttaatcttcggatactctcctgatacatattggaaagtatcaggaaggtatcggtgcatgatacacaggggatacaatatgtcatccattttaaagtatc 6708150  T
Q  449 ggggcttca 457  Q
    |||||||||    
T  6708151 ggggcttca 6708159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 359 - 451
Target Start/End: Original strand, 13061325 - 13061417
Alignment:
Q  359 gatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatcggg 451  Q
    ||||||||||  ||||||||| |||||||||  |||||||||| ||||| |||||||| | ||| | |||||||| ||| |||||||||||||    
T  13061325 gatactctcctaatacgtatcagaaagtatcaggcagatatcgatgcaggatacgcagagaatatggtacgtcattcattttgaagtatcggg 13061417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 16 - 75
Target Start/End: Original strand, 7188067 - 7188125
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattatatccaaa 75  Q
    |||||||||| |||||||||||||||| |||||||||||||||||| || ||||||||||    
T  7188067 caaaaggaac-ttgttagtgctatactatatcgatccaaaaaagaatcactatatccaaa 7188125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 16 - 75
Target Start/End: Original strand, 31195639 - 31195697
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattatatccaaa 75  Q
    |||||||||| |||||||||||||||| |||||||||||||||||| || ||||||||||    
T  31195639 caaaaggaac-ttgttagtgctatactatatcgatccaaaaaagaatcactatatccaaa 31195697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 234604 - 234551
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattata 69  Q
    |||||| |||||||| ||||||||||| ||||||||||||||||||||| ||||    
T  234604 caaaagaaacattgtcagtgctatactatatcgatccaaaaaagaagcactata 234551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 397 - 457
Target Start/End: Complemental strand, 31079672 - 31079612
Alignment:
Q  397 tatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatcggggcttca 457  Q
    ||||||||||| |||||||||| |||| ||||||||||||| || ||||||||| ||||||    
T  31079672 tatcggtgcaggatacgcaggggatacaatacgtcatccattttaaagtatcggagcttca 31079612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 18 - 69
Target Start/End: Complemental strand, 27084267 - 27084216
Alignment:
Q  18 aaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattata 69  Q
    ||||||||||||||||| ||||||| ||||||| ||||||||||||| ||||    
T  27084267 aaaggaacattgttagttctatactatatcgattcaaaaaagaagcactata 27084216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 6707841 - 6707899
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatcc-aaaaaagaagcattatatcca 73  Q
    ||||| |||||||||||||| |||||| ||| ||||| |||||||||||||||||||||    
T  6707841 caaaatgaacattgttagtgttatactatattgatccaaaaaaagaagcattatatcca 6707899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 30 - 75
Target Start/End: Original strand, 13061189 - 13061234
Alignment:
Q  30 ttagtgctatactgtatcgatccaaaaaagaagcattatatccaaa 75  Q
    ||||||||||||| ||||||||||||||||||||  ||||||||||    
T  13061189 ttagtgctatactatatcgatccaaaaaagaagcgctatatccaaa 13061234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 24 - 73
Target Start/End: Complemental strand, 26327604 - 26327555
Alignment:
Q  24 acattgttagtgctatactgtatcgatccaaaaaagaagcattatatcca 73  Q
    |||||||||||| |||||| ||| ||||||||||||||||| ||||||||    
T  26327604 acattgttagtgttatactatattgatccaaaaaagaagcactatatcca 26327555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 27 - 75
Target Start/End: Original strand, 1036114 - 1036162
Alignment:
Q  27 ttgttagtgctatactgtatcgatccaaaaaagaagcattatatccaaa 75  Q
    ||||||||| |||||| |||||||||||||||||| || ||||||||||    
T  1036114 ttgttagtgatatactatatcgatccaaaaaagaatcactatatccaaa 1036162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 15 - 71
Target Start/End: Complemental strand, 3212887 - 3212831
Alignment:
Q  15 tcaaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattatatc 71  Q
    |||||| |||||||||||||| |||||| |||||||| |||||| ||||| ||||||    
T  3212887 tcaaaaagaacattgttagtgttatactatatcgatctaaaaaataagcactatatc 3212831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 71
Target Start/End: Complemental strand, 7255239 - 7255183
Alignment:
Q  16 caaaaggaacatt-gttagtgctatactgtatcgatccaaaaaagaagcattatatc 71  Q
    ||||||||||||| |||| || |||||| ||||||||||||||||||||| ||||||    
T  7255239 caaaaggaacatttgttaatgttatactatatcgatccaaaaaagaagcactatatc 7255183  T

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Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 458
Target Start/End: Complemental strand, 11105373 - 11105285
Alignment:
Q  370 gatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatcggggcttcat 458  Q
    |||||||||| ||||||||||| ||  ||||| ||||| |||||||  | ||||| |||||||||||| || ||||||| | |||||||    
T  11105373 gatacgtatcagaaagtatcgaacatgtatcgatgcaggatacgcaaagaatacggtacgtcatccattttaaagtatcagagcttcat 11105285  T

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Target: chr6; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 359 - 415
Target Start/End: Original strand, 22989354 - 22989410
Alignment:
Q  359 gatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgca 415  Q
    |||||| ||||||||||||| ||||||||||  | ||||||| ||||||||||||||    
T  22989354 gatactatcccgatacgtataggaaagtatcaggtagatatctgtgcagaatacgca 22989410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 359 - 415
Target Start/End: Complemental strand, 23799043 - 23798987
Alignment:
Q  359 gatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgca 415  Q
    |||||| ||||||||||||| ||||||||||  | ||||||| ||||||||||||||    
T  23799043 gatactatcccgatacgtataggaaagtatcaggtagatatctgtgcagaatacgca 23798987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 75
Target Start/End: Complemental strand, 8357709 - 8357651
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattatatccaaa 75  Q
    |||||||||| |||||||| ||||| | ||| ||||||||||||||||| ||||||||||    
T  8357709 caaaaggaac-ttgttagtactatattatattgatccaaaaaagaagcactatatccaaa 8357651  T

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Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 392 - 457
Target Start/End: Original strand, 10894626 - 10894690
Alignment:
Q  392 gcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatcggggcttca 457  Q
    |||| ||||||||||  |||||| ||| ||||| |||||||||||| |||||||||| ||||||||    
T  10894626 gcaggtatcggtgcatgatacgcgggg-atacggtacgtcatccattttgaagtatcagggcttca 10894690  T

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Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 450
Target Start/End: Original strand, 31741202 - 31741267
Alignment:
Q  385 gtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatcgg 450  Q
    |||||| |||| ||||| ||||  || || |||| |||||||||||||||||| ||||||||||||    
T  31741202 gtatcgggcaggtatcgatgcatgatgcgtaggggatacgatacgtcatccattttgaagtatcgg 31741267  T

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Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 16 - 64
Target Start/End: Complemental strand, 11105604 - 11105556
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagca 64  Q
    ||||| |||||||||||||| |||||| |||| |||||||| |||||||    
T  11105604 caaaatgaacattgttagtgttatactatatcaatccaaaagagaagca 11105556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 167; Significance: 3e-89; HSPs: 87)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 16 - 233
Target Start/End: Original strand, 31653103 - 31653318
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattatatccaaagtggagggcaaccattttggaagaaaaagttgaaacccta 115  Q
    ||||||||| ||||||| ||||||||| ||||||||||||||||||||| ||||||||||||||| ||| ||||||||||||||||||||||||| ||||    
T  31653103 caaaaggaaaattgttaatgctatactatatcgatccaaaaaagaagcactatatccaaagtggaaggcgaccattttggaagaaaaagttgaaaaccta 31653202  T
Q  116 attttttaaaaaggggaagatgaaattgtttatgtggtatggtgtgggtcgtactggcaccaaagaaagataaaggaaatgtatatatattatagtaata 215  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||    
T  31653203 attttttaaaaaggggaagatgaaattgtttctgtggtatggtgtgggtcgtactggcaccaaagaaagataaaggaaatgtatatatat--tagtaata 31653300  T
Q  216 tgatgattttattcttat 233  Q
    | ||| ||||||||||||    
T  31653301 taatgtttttattcttat 31653318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 165; E-Value: 5e-88
Query Start/End: Original strand, 17 - 233
Target Start/End: Original strand, 13012678 - 13012894
Alignment:
Q  17 aaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattatatccaaagtggagggcaaccattttggaagaaaaagttgaaaccctaa 116  Q
    ||||||||||||| |||||||||| | ||||||||||||||||||||| ||||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  13012678 aaaaggaacattgctagtgctatattatatcgatccaaaaaagaagcactatatccaaagtggaaggcgaccattttggaagaaaaagttgaaaccctaa 13012777  T
Q  117 ttttttaaaaaggggaagatgaaattgtttatgtggtatggtgtgggtcgtactggcaccaaagaaagataaaggaaatgtatatatattatagtaatat 216  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||| ||||||    
T  13012778 ttttttagaaaggggaagatgaaattgtttctgtggtatggtgtgggtcgtaccggcacaaaagaaagataaaggaaatgtatatatattataataatat 13012877  T
Q  217 gatgattttattcttat 233  Q
     ||| ||||||||||||    
T  13012878 aatgtttttattcttat 13012894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 16 - 233
Target Start/End: Complemental strand, 14334588 - 14334372
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattatatccaaagtggagggcaaccattttggaagaaaaagttgaaacccta 115  Q
    |||||| |||||||||||||||||||| |||||||||||||||||||||  |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  14334588 caaaagaaacattgttagtgctatactatatcgatccaaaaaagaagcaccatatccaaagtggaaggcaaccattttggaagaaaaagttgaaacccta 14334489  T
Q  116 attttttaaaaaggggaagatgaaattgtttatgtggtatggtgtgggtcgtactggcaccaaagaaagat-aaaggaaatgtatatatattatagtaat 214  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||    
T  14334488 attttttaaaaaggggaagatgaaattgtttctgtggtatggtgtgggtcgtactggcaccaaagaaagataaaaggaaatg--tatatattatagtaat 14334391  T
Q  215 atgatgattttattcttat 233  Q
    || ||| ||||||| ||||    
T  14334390 ataatgtttttattgttat 14334372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 16 - 233
Target Start/End: Complemental strand, 43190074 - 43189857
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattatatccaaagtggagggcaaccattttggaagaaaaagttgaaacccta 115  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||  || ||||||||| ||||||||||||||||||||    
T  43190074 caaaaggaacattgttagtgctatactatatcgatccaaaaaagaagcactatatccaaagtggaaagcgaccattttgaaagaaaaagttgaaacccta 43189975  T
Q  116 attttttaaaaaggggaagatgaaattgtttatgtggtatggtgtgggtcgtactggcaccaaagaaagataaaggaaatgtatatatattatagtaata 215  Q
    ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||||||| |||||||||||||||| |||||||| |||||||||    
T  43189974 attttttaaaaaggggaagatgaaattgtttctgtggtatggtgtgagtcgtactgacaccaaataaagataaaggaaatgaatatatatcatagtaata 43189875  T
Q  216 tgatgattttattcttat 233  Q
    | ||| ||||||||||||    
T  43189874 taatgtttttattcttat 43189857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 21 - 195
Target Start/End: Original strand, 37346648 - 37346822
Alignment:
Q  21 ggaacattgttagtgctatactgtatcgatccaaaaaagaagcattatatccaaagtggagggcaaccattttggaagaaaaagttgaaaccctaatttt 120  Q
    |||||||||||| ||||||||| |||| ||| |||||||||||| ||||||||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  37346648 ggaacattgttaatgctatactatatcaatcaaaaaaagaagcactatatccaaagtggaaggcaaccattttgaaagaaaaagttgaaaccctaatttt 37346747  T
Q  121 ttaaaaaggggaagatgaaattgtttatgtggtatggtgtgggtcgtactggcaccaaagaaagataaaggaaat 195  Q
    |||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||    
T  37346748 ttaaaaaggggaagatgaaattgtttgtgtggtatggtgtgggtcatactggcaccaaagaaagataaaggaaat 37346822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 71 - 233
Target Start/End: Complemental strand, 8132544 - 8132382
Alignment:
Q  71 ccaaagtggagggcaaccattttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaaattgtttatgtggtatggtgtgggtcgtact 170  Q
    |||||||||| ||| |||| ||||||||||||||||||||||||||||| ||| |||||| |||||| ||||| || |||||| ||||||||||||||||    
T  8132544 ccaaagtggacggcgaccactttggaagaaaaagttgaaaccctaatttcttagaaagggaaagatgcaattggttgtgtggtgtggtgtgggtcgtact 8132445  T
Q  171 ggcaccaaagaaagataaaggaaatgtatatatattatagtaatatgatgattttattcttat 233  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||    
T  8132444 ggcaccaaagaaagataaaggaaatgtatatatattatagtaatataatgtttttattcttat 8132382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 71 - 233
Target Start/End: Original strand, 6916608 - 6916770
Alignment:
Q  71 ccaaagtggagggcaaccattttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaaattgtttatgtggtatggtgtgggtcgtact 170  Q
    |||||||||| ||| |||| ||||||||||||||||||||||||||||| ||| |||||| |||||| ||||| || |||||| ||||||||||||||||    
T  6916608 ccaaagtggacggcgaccactttggaagaaaaagttgaaaccctaatttcttagaaagggaaagatgcaattggttgtgtggtgtggtgtgggtcgtact 6916707  T
Q  171 ggcaccaaagaaagataaaggaaatgtatatatattatagtaatatgatgattttattcttat 233  Q
    ||||||||||||||||||||||||| |||||||||||||||||||| ||| ||||||||||||    
T  6916708 ggcaccaaagaaagataaaggaaatatatatatattatagtaatataatgtttttattcttat 6916770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 71 - 233
Target Start/End: Complemental strand, 38330811 - 38330649
Alignment:
Q  71 ccaaagtggagggcaaccattttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaaattgtttatgtggtatggtgtgggtcgtact 170  Q
    |||||||||| ||| |||| ||||||||||||||||||||||||||||| ||| |||||| |||||| ||||| || |||||| ||||||||||||||||    
T  38330811 ccaaagtggacggcgaccactttggaagaaaaagttgaaaccctaatttcttagaaagggaaagatgcaattggttgtgtggtgtggtgtgggtcgtact 38330712  T
Q  171 ggcaccaaagaaagataaaggaaatgtatatatattatagtaatatgatgattttattcttat 233  Q
    ||||||||||||||||||||||||| |||||||||||||||||||| ||| ||||||||||||    
T  38330711 ggcaccaaagaaagataaaggaaatatatatatattatagtaatataatgtttttattcttat 38330649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 71 - 233
Target Start/End: Original strand, 52895447 - 52895609
Alignment:
Q  71 ccaaagtggagggcaaccattttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaaattgtttatgtggtatggtgtgggtcgtact 170  Q
    |||||||||| ||| |||| ||||||||||||||||||||||||||||| ||| |||||| |||||| ||||| || |||||| ||||||||||||||||    
T  52895447 ccaaagtggacggcgaccactttggaagaaaaagttgaaaccctaatttcttagaaagggaaagatgcaattggttgtgtggtgtggtgtgggtcgtact 52895546  T
Q  171 ggcaccaaagaaagataaaggaaatgtatatatattatagtaatatgatgattttattcttat 233  Q
    ||||||||||||||||||||||||| |||||||||||||||||||| ||| ||||||||||||    
T  52895547 ggcaccaaagaaagataaaggaaatatatatatattatagtaatataatgtttttattcttat 52895609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 70 - 233
Target Start/End: Complemental strand, 30324091 - 30323929
Alignment:
Q  70 tccaaagtggagggcaaccattttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaaattgtttatgtggtatggtgtgggtcgtac 169  Q
    ||||||||||| ||| |||| |||||||||||| |||||||||||||||| ||| |||||| |||||| |||||||| |||||| ||||||||| |||||    
T  30324091 tccaaagtggacggcgaccactttggaagaaaa-gttgaaaccctaatttcttataaagggaaagatgcaattgtttgtgtggtgtggtgtgggccgtac 30323993  T
Q  170 tggcaccaaagaaagataaaggaaatgtatatatattatagtaatatgatgattttattcttat 233  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||    
T  30323992 tggcaccaaagaaagataaaggaaatgtatatatattatagtaatataatgtttttattcttat 30323929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 71 - 233
Target Start/End: Complemental strand, 3427234 - 3427072
Alignment:
Q  71 ccaaagtggagggcaaccattttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaaattgtttatgtggtatggtgtgggtcgtact 170  Q
    ||||||||||  || |||| ||||||||||||||||||||||||||||| ||| |||||| |||||| ||||| || |||||| ||||||||||||||||    
T  3427234 ccaaagtggacagcgaccactttggaagaaaaagttgaaaccctaatttcttagaaagggaaagatgcaattggttgtgtggtgtggtgtgggtcgtact 3427135  T
Q  171 ggcaccaaagaaagataaaggaaatgtatatatattatagtaatatgatgattttattcttat 233  Q
    ||||||||||| |||||||||||||||||||||||||||||||||| ||| ||||||||||||    
T  3427134 ggcaccaaagatagataaaggaaatgtatatatattatagtaatataatgtttttattcttat 3427072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 71 - 233
Target Start/End: Complemental strand, 25256987 - 25256825
Alignment:
Q  71 ccaaagtggagggcaaccattttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaaattgtttatgtggtatggtgtgggtcgtact 170  Q
    |||||||||| ||| || | ||||||||||||||||||||||||||||| ||| |||||| |||||| |||||||| |||||| |||| |||||||||||    
T  25256987 ccaaagtggacggcgactactttggaagaaaaagttgaaaccctaatttcttagaaagggaaagatgcaattgtttgtgtggtgtggtatgggtcgtact 25256888  T
Q  171 ggcaccaaagaaagataaaggaaatgtatatatattatagtaatatgatgattttattcttat 233  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||    
T  25256887 ggcaccaaagaaagataaaggaaatgtatatatattatagtaatataatatttttattcttat 25256825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 71 - 233
Target Start/End: Original strand, 28659052 - 28659212
Alignment:
Q  71 ccaaagtggagggcaaccattttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaaattgtttatgtggtatggtgtgggtcgtact 170  Q
    |||||||||| |||| ||| ||||||||||||||||||||||||||||| ||| |||||| |||||| |||||||| |||||| ||||||||||||||||    
T  28659052 ccaaagtggacggcacccactttggaagaaaaagttgaaaccctaatttcttagaaagggaaagatgcaattgtttgtgtggtgtggtgtgggtcgtact 28659151  T
Q  171 ggcaccaaagaaagataaaggaaatgtatatatattatagtaatatgatgattttattcttat 233  Q
    ||||||||||| |||||||||||||||||||||||||||| ||||  ||| ||||||||||||    
T  28659152 ggcaccaaagatagataaaggaaatgtatatatattatagcaata--atgtttttattcttat 28659212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 71 - 233
Target Start/End: Complemental strand, 5984558 - 5984396
Alignment:
Q  71 ccaaagtggagggcaaccattttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaaattgtttatgtggtatggtgtgggtcgtact 170  Q
    |||||||||| ||| |||| ||||||||||||||||||||||||||||| ||| |||||  |||||| |||||||| |||||| |||||||||||||||     
T  5984558 ccaaagtggacggcgaccactttggaagaaaaagttgaaaccctaatttcttataaaggaaaagatgcaattgtttgtgtggtgtggtgtgggtcgtacc 5984459  T
Q  171 ggcaccaaagaaagataaaggaaatgtatatatattatagtaatatgatgattttattcttat 233  Q
    | ||||||||||| |||||||||||||||||||||| ||||||||| ||  ||||||||||||    
T  5984458 gacaccaaagaaaaataaaggaaatgtatatatattgtagtaatataatatttttattcttat 5984396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 349 - 458
Target Start/End: Complemental strand, 37104228 - 37104119
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    |||||||||||||||||||| |||||||||| | |||||||| |||| ||||||||||| |||||||||| |||||||||||||||||| ||||||||||    
T  37104228 ttaatatttggatactctccggatacgtatcaggaagtatcgggcaggtatcggtgcaggatacgcaggggatacgatacgtcatccattttgaagtatc 37104129  T
Q  449 ggggcttcat 458  Q
    ||||||||||    
T  37104128 ggggcttcat 37104119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 349 - 457
Target Start/End: Original strand, 6916884 - 6916992
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    ||||||||| |||||||||| ||||||||||||||||||||| |||| ||||||||||| |||||||||| ||||| |||||||||||| ||||||||||    
T  6916884 ttaatatttagatactctccggatacgtatcggaaagtatcgggcaggtatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatc 6916983  T
Q  449 ggggcttca 457  Q
    |||||||||    
T  6916984 ggggcttca 6916992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 349 - 457
Target Start/End: Original strand, 20409564 - 20409672
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    |||||||||||||||||||| |||||||||||| |||||||| |||| ||||||||||| |||||||||| ||||| |||||||||||| ||||||||||    
T  20409564 ttaatatttggatactctccggatacgtatcgggaagtatcgggcaggtatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatc 20409663  T
Q  449 ggggcttca 457  Q
    |||||||||    
T  20409664 ggggcttca 20409672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 349 - 457
Target Start/End: Original strand, 37346858 - 37346966
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    ||||||||||||||||| ||||||||||||||| |||||||| |||| ||||||||||| |||||||||| ||||| |||||||||||| ||||||||||    
T  37346858 ttaatatttggatactcccccgatacgtatcgggaagtatcgggcaggtatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatc 37346957  T
Q  449 ggggcttca 457  Q
    |||||||||    
T  37346958 ggggcttca 37346966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 349 - 457
Target Start/End: Complemental strand, 38330535 - 38330427
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    ||||||||| |||||||||| ||||||||||||||||||||| |||| ||||||||||| |||||||||| ||||| |||||||||||| ||||||||||    
T  38330535 ttaatatttagatactctccggatacgtatcggaaagtatcgggcaggtatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatc 38330436  T
Q  449 ggggcttca 457  Q
    |||||||||    
T  38330435 ggggcttca 38330427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 349 - 457
Target Start/End: Original strand, 52895723 - 52895831
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    ||||||||| |||||||||| ||||||||||||||||||||| |||| ||||||||||| |||||||||| ||||| |||||||||||| ||||||||||    
T  52895723 ttaatatttagatactctccggatacgtatcggaaagtatcgggcaggtatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatc 52895822  T
Q  449 ggggcttca 457  Q
    |||||||||    
T  52895823 ggggcttca 52895831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 349 - 457
Target Start/End: Complemental strand, 1036567 - 1036459
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    |||||||||||||||||||| ||||||||||||||||||||| |||| ||||||||||| |||||||||| ||||| |||||||||||| |||||||||     
T  1036567 ttaatatttggatactctccggatacgtatcggaaagtatcgggcaggtatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatg 1036468  T
Q  449 ggggcttca 457  Q
     ||||||||    
T  1036467 agggcttca 1036459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 349 - 457
Target Start/End: Complemental strand, 1043335 - 1043227
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    |||||||||||||||||||| |||||||||||| |||||||| |||| ||||||||||| |||||||||| ||||| ||| |||||||| ||||||||||    
T  1043335 ttaatatttggatactctccggatacgtatcgggaagtatcgggcaggtatcggtgcaggatacgcaggggatacggtacatcatccattttgaagtatc 1043236  T
Q  449 ggggcttca 457  Q
    |||||||||    
T  1043235 ggggcttca 1043227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 349 - 457
Target Start/End: Original strand, 28949251 - 28949359
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    |||||||||||||||||||| |||||||||| | |||||||| |||| ||||||||||| |||||||||| ||||| |||||||||||| ||||||||||    
T  28949251 ttaatatttggatactctccggatacgtatcaggaagtatcgggcaggtatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatc 28949350  T
Q  449 ggggcttca 457  Q
    |||||||||    
T  28949351 ggggcttca 28949359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 349 - 456
Target Start/End: Complemental strand, 5984335 - 5984228
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    |||||||||||||||||||| ||||||||| || ||||||| ||||  |||||||||||||||||||||| ||||  |||||||||||| ||||||||||    
T  5984335 ttaatatttggatactctccagatacgtattgggaagtatcaagcatgtatcggtgcagaatacgcaggggatacagtacgtcatccattttgaagtatc 5984236  T
Q  449 ggggcttc 456  Q
    ||||||||    
T  5984235 ggggcttc 5984228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 348 - 457
Target Start/End: Complemental strand, 9781751 - 9781642
Alignment:
Q  348 attaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtat 447  Q
    |||||| || ||||||||| | ||||||||||||||||||||| |||| ||||||||||| |||||||||| ||||||||||||| |||| |||||||||    
T  9781751 attaatcttcggatactcttctgatacgtatcggaaagtatcgggcaggtatcggtgcaggatacgcaggggatacgatacgtcaaccattttgaagtat 9781652  T
Q  448 cggggcttca 457  Q
    | ||||||||    
T  9781651 cagggcttca 9781642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 349 - 457
Target Start/End: Complemental strand, 8132291 - 8132183
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    |||||||||||||||||||| |||||||||||| ||||||||| ||  ||||||||||| |||||||||| ||||| ||||||||| || ||||||||||    
T  8132291 ttaatatttggatactctccggatacgtatcgggaagtatcgaacatgtatcggtgcaggatacgcaggggatacggtacgtcatctattttgaagtatc 8132192  T
Q  449 ggggcttca 457  Q
    || ||||||    
T  8132191 ggagcttca 8132183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 349 - 457
Target Start/End: Original strand, 13013002 - 13013110
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||| |||| |||||  |||| ||||| |||||||| ||||||||| |||||||||     
T  13013002 ttaatatttggatactctcccgatacgtatcgggaagtatcgggcaggtatcagtgcatgatacacaggggatacgatatgtcatccattttgaagtatt 13013101  T
Q  449 ggggcttca 457  Q
    |||||||||    
T  13013102 ggggcttca 13013110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 349 - 457
Target Start/End: Original strand, 31653412 - 31653520
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||  |||| || || ||||||||| | |||||| ||||||||||    
T  31653412 ttaatatttggatactctcccgatacgtatcgggaagtatcgggcagatatcggtgcatgatacacaagggatacgatacattatccattttgaagtatc 31653511  T
Q  449 ggggcttca 457  Q
     ||||||||    
T  31653512 agggcttca 31653520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 349 - 457
Target Start/End: Complemental strand, 43189763 - 43189655
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    |||||||||||||||||||| |||||||||||  |||||||| |||| ||||||||||| |||||||||| ||||| ||| |||||||| ||||||||||    
T  43189763 ttaatatttggatactctcctgatacgtatcgagaagtatcgggcaggtatcggtgcaggatacgcaggggatacggtacatcatccattttgaagtatc 43189664  T
Q  449 ggggcttca 457  Q
    ||| |||||    
T  43189663 gggtcttca 43189655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 148 - 230
Target Start/End: Complemental strand, 1043537 - 1043455
Alignment:
Q  148 tgtggtatggtgtgggtcgtactggcaccaaagaaagataaaggaaatgtatatatattatagtaatatgatgattttattct 230  Q
    |||||| |||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| ||| |||||||||    
T  1043537 tgtggtgtggtgtgggtcgtactagcaccaaaaaaagataaaggaaatgtatatatattatagtaatataatgtttttattct 1043455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 349 - 455
Target Start/End: Complemental strand, 30323823 - 30323717
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    |||||||||||||||||||| |||||||||||| |||||||| ||||||||| |||||| |||| ||| | ||||| | |||||||||| ||||||||||    
T  30323823 ttaatatttggatactctccagatacgtatcgggaagtatcgggcagatatcagtgcaggatacacagagaatacgttgcgtcatccattttgaagtatc 30323724  T
Q  449 ggggctt 455  Q
    |||||||    
T  30323723 ggggctt 30323717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 349 - 457
Target Start/End: Complemental strand, 3426956 - 3426848
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    |||||||||||||||||||| |||||||||| | ||||||||  ||  ||||||||||| |||||||||| |||| ||||||||||||| || |||||||    
T  3426956 ttaatatttggatactctccggatacgtatcaggaagtatcggacatgtatcggtgcaggatacgcaggggatacaatacgtcatccattttaaagtatc 3426857  T
Q  449 ggggcttca 457  Q
    |||||||||    
T  3426856 ggggcttca 3426848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 125 - 205
Target Start/End: Original strand, 20409318 - 20409398
Alignment:
Q  125 aaaggggaagatgaaattgtttatgtggtatggtgtgggtcgtactggcaccaaagaaagataaaggaaatgtatatatat 205  Q
    |||||| |||||| ||||| || |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20409318 aaagggaaagatgtaattgattgtgtggtgtggtgtgggtcgtactggcaccaaagaaagataaaggaaatgtatatatat 20409398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 349 - 457
Target Start/End: Complemental strand, 38948840 - 38948732
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    |||||||||||||| ||| | |||||||||||  |||||| | |||||||||||||||| |||||||||| ||||| |||||||||||| || |||||||    
T  38948840 ttaatatttggatattcttcggatacgtatcgagaagtattgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccattttaaagtatc 38948741  T
Q  449 ggggcttca 457  Q
    || ||||||    
T  38948740 ggagcttca 38948732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 358 - 457
Target Start/End: Original strand, 2472873 - 2472972
Alignment:
Q  358 ggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatcggggcttca 457  Q
    ||||||||||| ||||||||||||||||||||  |||| || |||||||| ||| |||||| ||||||||||||||| || |||||||||||| ||||||    
T  2472873 ggatactctcctgatacgtatcggaaagtatcaggcaggtaccggtgcaggatatgcaggggatacgatacgtcatctattttgaagtatcggagcttca 2472972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 349 - 448
Target Start/End: Original strand, 28659310 - 28659409
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    |||||||||||||||||||| ||||||||||||||||||||| |||  ||||||||||  |||||||||| ||||  |||||||||||| || |||||||    
T  28659310 ttaatatttggatactctccggatacgtatcggaaagtatcgggcatgtatcggtgcatgatacgcagggaataccgtacgtcatccattttaaagtatc 28659409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 349 - 457
Target Start/End: Complemental strand, 25256724 - 25256616
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    |||||||||| ||||||||| |||||||||||| ||||||||  ||| |||||||||||||||||||| | ||||  |||||||||||| ||||| ||||    
T  25256724 ttaatatttgaatactctccggatacgtatcgggaagtatcggacaggtatcggtgcagaatacgcagaggatacagtacgtcatccattttgaaatatc 25256625  T
Q  449 ggggcttca 457  Q
     | ||||||    
T  25256624 agagcttca 25256616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 349 - 447
Target Start/End: Complemental strand, 29168055 - 29167957
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtat 447  Q
    ||||| || ||||||||||| |||||||| ||| |||||||  |||| ||||||||||| |||||||||| ||| |||||||||||||| |||||||||    
T  29168055 ttaatcttcggatactctcctgatacgtaacgggaagtatcatgcaggtatcggtgcaggatacgcaggggatatgatacgtcatccattttgaagtat 29167957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 359 - 457
Target Start/End: Original strand, 34096572 - 34096670
Alignment:
Q  359 gatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatcggggcttca 457  Q
    |||||||| | ||| |||||  |||||||||| |||||||||||||||| |||||||||| |||||||||||||  ||| ||||| |||||||||||||    
T  34096572 gatactcttctgatgcgtattagaaagtatcgcgcagatatcggtgcaggatacgcaggggatacgatacgtcaatcattttgaaatatcggggcttca 34096670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 155 - 209
Target Start/End: Complemental strand, 38949028 - 38948974
Alignment:
Q  155 tggtgtgggtcgtactggcaccaaagaaagataaaggaaatgtatatatattata 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  38949028 tggtgtgggtcgtactggcaccaaagaaagataaaggaaatgtatgtatattata 38948974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 125 - 202
Target Start/End: Original strand, 28948745 - 28948822
Alignment:
Q  125 aaaggggaagatgaaattgtttatgtggtatggtgtgggtcgtactggcaccaaagaaagataaaggaaatgtatata 202  Q
    |||||| |||||| ||||| || |||||| ||||||||||||||| |||||||||||||||||||| |||||||||||    
T  28948745 aaagggaaagatgcaattggttgtgtggtgtggtgtgggtcgtaccggcaccaaagaaagataaagaaaatgtatata 28948822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 349 - 457
Target Start/End: Original strand, 3708289 - 3708397
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    |||||||| | ||||||||| ||||||||||| ||||||||| |||  ||| |||| || ||| |||| | |||||||||||||||||| ||||||||||    
T  3708289 ttaatattcgaatactctcctgatacgtatcgaaaagtatcgggcatgtattggtgtaggatatgcagaggatacgatacgtcatccattttgaagtatc 3708388  T
Q  449 ggggcttca 457  Q
    |||| ||||    
T  3708389 ggggtttca 3708397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 349 - 457
Target Start/End: Original strand, 34432393 - 34432501
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    ||||| || ||||||||||| |||||||||| | |||||||  ||||||| | |||||  |||||||||| |||| ||||||||||||| ||||||||||    
T  34432393 ttaatcttcggatactctcctgatacgtatcaggaagtatcaggcagataccagtgcatgatacgcaggggatacaatacgtcatccattttgaagtatc 34432492  T
Q  449 ggggcttca 457  Q
    || ||||||    
T  34432493 ggagcttca 34432501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 349 - 458
Target Start/End: Complemental strand, 10822511 - 10822401
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcgg-tgcagaatacgcagggtatacgatacgtcatccatcttgaagtat 447  Q
    ||||| || ||||||||||| || | ||||||| |||||||   |||||||||| ||||| |||||||||| ||| |||||||||||||| |||||||||    
T  10822511 ttaatcttcggatactctcctgagatgtatcgggaagtatcagacagatatcgggtgcaggatacgcagggaatatgatacgtcatccattttgaagtat 10822412  T
Q  448 cggggcttcat 458  Q
    || ||||||||    
T  10822411 cgaggcttcat 10822401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 349 - 457
Target Start/End: Complemental strand, 2364785 - 2364677
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    ||||| || ||||||||| | ||||||||||||||||||| | |||| ||||| ||||| |||||||||| ||| | ||||| |||||| ||||||||||    
T  2364785 ttaatcttcggatactcttctgatacgtatcggaaagtattgggcaggtatcgatgcaggatacgcaggggatatggtacgttatccattttgaagtatc 2364686  T
Q  449 ggggcttca 457  Q
     ||| ||||    
T  2364685 tgggtttca 2364677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 16 - 64
Target Start/End: Complemental strand, 9781937 - 9781889
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagca 64  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||    
T  9781937 caaaagaaacattgttagtgctatactgtatcgatccaaaaaagaagca 9781889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 349 - 449
Target Start/End: Complemental strand, 14167192 - 14167092
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    ||||| || ||||||||| | |||||||||| | |||||||   ||||||||||||||| |||||||||  |||||||| ||||||||| ||||||||||    
T  14167192 ttaatcttcggatactcttctgatacgtatcaggaagtatcagacagatatcggtgcaggatacgcaggtgatacgataagtcatccattttgaagtatc 14167093  T
Q  449 g 449  Q
    |    
T  14167092 g 14167092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 16 - 75
Target Start/End: Complemental strand, 25257434 - 25257376
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattatatccaaa 75  Q
    |||||||||| |||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  25257434 caaaaggaac-ttgttagtgctatactatatcgatccaaaaaagaagcactatatccaaa 25257376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 358 - 457
Target Start/End: Complemental strand, 29861900 - 29861801
Alignment:
Q  358 ggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatcggggcttca 457  Q
    ||||||||| | ||||||||||||||||||||| |||| | | ||||||  ||||| |||  |||| |||||||| |||| |||||||||||||||||||    
T  29861900 ggatactcttctgatacgtatcggaaagtatcgggcaggtgtgggtgcatgatacgtaggagatacaatacgtcaaccattttgaagtatcggggcttca 29861801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 349 - 455
Target Start/End: Complemental strand, 40776103 - 40775997
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    ||||| || |||||||| || |||||||||||  |||||||  |||||||| ||||||| |||||||||| ||||  |||||| ||||| ||||||||||    
T  40776103 ttaatcttcggatactcgcctgatacgtatcgagaagtatcatgcagatattggtgcaggatacgcaggggatacattacgtcttccattttgaagtatc 40776004  T
Q  449 ggggctt 455  Q
     ||||||    
T  40776003 tgggctt 40775997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 27 - 75
Target Start/End: Complemental strand, 30324527 - 30324479
Alignment:
Q  27 ttgttagtgctatactgtatcgatccaaaaaagaagcattatatccaaa 75  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  30324527 ttgttagtgctatactatatcgatccaaaaaagaagcactatatccaaa 30324479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 15 - 75
Target Start/End: Original strand, 32380880 - 32380940
Alignment:
Q  15 tcaaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattatatccaaa 75  Q
    ||||||||||||||||||||| |||||| |||  || ||||||||||||||||||||||||    
T  32380880 tcaaaaggaacattgttagtgttatactatatttattcaaaaaagaagcattatatccaaa 32380940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 16 - 72
Target Start/End: Complemental strand, 47654981 - 47654925
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattatatcc 72  Q
    ||||| |||||||||||||| |||||| ||||||||||||||||||||| |||||||    
T  47654981 caaaatgaacattgttagtgttatactatatcgatccaaaaaagaagcactatatcc 47654925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 349 - 457
Target Start/End: Original strand, 48715235 - 48715343
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    ||||| || ||| ||||||| |||||||||||| |||||||| || | |||||||| || |||||||||  |||||||||   |||||| ||||||||||    
T  48715235 ttaatcttcggacactctcctgatacgtatcgggaagtatcgggccggtatcggtgtaggatacgcaggagatacgatacaatatccattttgaagtatc 48715334  T
Q  449 ggggcttca 457  Q
    |||| ||||    
T  48715335 ggggtttca 48715343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 16 - 75
Target Start/End: Complemental strand, 5985004 - 5984946
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattatatccaaa 75  Q
    |||||||||| |||| ||||||||||| ||||||||||||||||||||| ||||||||||    
T  5985004 caaaaggaac-ttgtcagtgctatactatatcgatccaaaaaagaagcactatatccaaa 5984946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 359 - 458
Target Start/End: Complemental strand, 15417551 - 15417452
Alignment:
Q  359 gatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatcggggcttcat 458  Q
    |||||||| |||||| ||||||  |||||||| ||| |||||| |||||||||||||| | ||| ||||| |||||||| || ||||||| || ||||||    
T  15417551 gatactcttccgatatgtatcgagaagtatcgggcatatatcgatgcagaatacgcagagaatatgatacatcatccattttaaagtatctggacttcat 15417452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 16 - 71
Target Start/End: Complemental strand, 24851787 - 24851732
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattatatc 71  Q
    ||||| ||||||||||||||||||||| |||||||||||||||||| || ||||||    
T  24851787 caaaacgaacattgttagtgctatactatatcgatccaaaaaagaatcactatatc 24851732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 16 - 71
Target Start/End: Original strand, 28658692 - 28658746
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattatatc 71  Q
    |||||||||| |||||||||||||||| ||||||||||||||||||||| ||||||    
T  28658692 caaaaggaac-ttgttagtgctatactatatcgatccaaaaaagaagcactatatc 28658746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 16 - 75
Target Start/End: Original strand, 36363344 - 36363402
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattatatccaaa 75  Q
    |||||||||| |||||||||||||||| |||||||||||||||||| || ||||||||||    
T  36363344 caaaaggaac-ttgttagtgctatactatatcgatccaaaaaagaatcactatatccaaa 36363402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 16 - 75
Target Start/End: Original strand, 36367468 - 36367526
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattatatccaaa 75  Q
    |||||||||| |||||||||||||||| |||||||||||||||||| || ||||||||||    
T  36367468 caaaaggaac-ttgttagtgctatactatatcgatccaaaaaagaatcactatatccaaa 36367526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 29 - 71
Target Start/End: Original strand, 3708100 - 3708142
Alignment:
Q  29 gttagtgctatactgtatcgatccaaaaaagaagcattatatc 71  Q
    |||||||||||||| ||||||||||||||||||||||||||||    
T  3708100 gttagtgctatactttatcgatccaaaaaagaagcattatatc 3708142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 16 - 69
Target Start/End: Original strand, 9528667 - 9528720
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattata 69  Q
    |||||| ||||| |||||||||||||| ||||||||||||||||||||| ||||    
T  9528667 caaaagaaacatcgttagtgctatactatatcgatccaaaaaagaagcactata 9528720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 10822689 - 10822636
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattata 69  Q
    |||||| ||||||||||||| |||| | ||||||||||||||||||||||||||    
T  10822689 caaaagaaacattgttagtgatatattatatcgatccaaaaaagaagcattata 10822636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 29168242 - 29168189
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattata 69  Q
    |||||| |||||||||||| ||||||| ||| ||||||||||||||||||||||    
T  29168242 caaaagaaacattgttagtactatactatattgatccaaaaaagaagcattata 29168189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 349 - 457
Target Start/End: Original strand, 36367712 - 36367810
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    |||||||||||||||||||| ||||||||||||          |||| ||||||||||| |||||||||| ||||  |||||||||||| ||||||||||    
T  36367712 ttaatatttggatactctccggatacgtatcgg----------gcaggtatcggtgcaggatacgcaggggatacagtacgtcatccattttgaagtatc 36367801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 359 - 443
Target Start/End: Original strand, 9528859 - 9528943
Alignment:
Q  359 gatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaa 443  Q
    |||||| |||||||||||||||| ||||||| | ||| ||||||||||  |||| || || |||| ||||||||||||| |||||    
T  9528859 gatactatcccgatacgtatcgggaagtatcaaacaggtatcggtgcaagatacacaagggatacaatacgtcatccattttgaa 9528943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 15 - 75
Target Start/End: Original strand, 24589923 - 24589983
Alignment:
Q  15 tcaaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattatatccaaa 75  Q
    |||||| |||||||||||||| |||||| |||||||||||||||||| || ||||| ||||    
T  24589923 tcaaaaagaacattgttagtgttatactatatcgatccaaaaaagaaacactatattcaaa 24589983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 17 - 69
Target Start/End: Original strand, 34096377 - 34096429
Alignment:
Q  17 aaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattata 69  Q
    ||||| |||||||||||||||||||| |||||||| |||||||||||| ||||    
T  34096377 aaaagaaacattgttagtgctatactatatcgatctaaaaaagaagcactata 34096429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 27 - 75
Target Start/End: Complemental strand, 37104458 - 37104410
Alignment:
Q  27 ttgttagtgctatactgtatcgatccaaaaaagaagcattatatccaaa 75  Q
    |||||||||||||||| |||||||||||||||||| || ||||||||||    
T  37104458 ttgttagtgctatactatatcgatccaaaaaagaatcactatatccaaa 37104410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 348 - 450
Target Start/End: Complemental strand, 10763768 - 10763668
Alignment:
Q  348 attaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtat 447  Q
    |||||| || ||||||||| | ||||||||||  ||| ||||| |||||||| ||||||| ||  |||||| ||||||||||||| |||| || ||||||    
T  10763768 attaatcttcggatactcttctgatacgtatcaaaaaatatcgggcagatattggtgcaggat--gcaggggatacgatacgtcaaccattttaaagtat 10763671  T
Q  448 cgg 450  Q
    |||    
T  10763670 cgg 10763668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 75
Target Start/End: Original strand, 28948497 - 28948555
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattatatccaaa 75  Q
    |||||||||| ||||||||| |||||| |||||||||||||||||| || ||||||||||    
T  28948497 caaaaggaac-ttgttagtgttatactatatcgatccaaaaaagaatcactatatccaaa 28948555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 18 - 69
Target Start/End: Original strand, 34432240 - 34432291
Alignment:
Q  18 aaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattata 69  Q
    |||| ||||||||||||| |||||| ||||||||||||||||||||| ||||    
T  34432240 aaagaaacattgttagtgttatactatatcgatccaaaaaagaagcactata 34432291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 75
Target Start/End: Complemental strand, 36551701 - 36551642
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattatatccaaa 75  Q
    |||||||||||||||||||| |||||| |||||||| ||||||||| || ||||| ||||    
T  36551701 caaaaggaacattgttagtgttatactatatcgatctaaaaaagaaacactatattcaaa 36551642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 349 - 406
Target Start/End: Complemental strand, 14334268 - 14334211
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgca 406  Q
    ||||||||||||||||||||| |||||||||||  |||||||  ||| ||||||||||    
T  14334268 ttaatatttggatactctcccaatacgtatcggggagtatcggacaggtatcggtgca 14334211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 29862092 - 29862039
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattata 69  Q
    |||||| ||||||||||||| |||||| |||| |||||||||||||||| ||||    
T  29862092 caaaagaaacattgttagtggtatactttatcaatccaaaaaagaagcactata 29862039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 27 - 75
Target Start/End: Complemental strand, 3427664 - 3427616
Alignment:
Q  27 ttgttagtgctatactgtatcgatccaaaaaagaagcattatatccaaa 75  Q
    ||||||||| |||||| |||||||||||||||||| || ||||||||||    
T  3427664 ttgttagtgttatactatatcgatccaaaaaagaatcactatatccaaa 3427616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 27 - 75
Target Start/End: Original strand, 6916162 - 6916210
Alignment:
Q  27 ttgttagtgctatactgtatcgatccaaaaaagaagcattatatccaaa 75  Q
    ||||||||| |||||| |||||||||||||||||| || ||||||||||    
T  6916162 ttgttagtgatatactatatcgatccaaaaaagaatcactatatccaaa 6916210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 64
Target Start/End: Complemental strand, 10763948 - 10763900
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagca 64  Q
    |||||| |||||| ||||||||||||| |||||||| ||||||||||||    
T  10763948 caaaagaaacatttttagtgctatactatatcgatctaaaaaagaagca 10763900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 27 - 75
Target Start/End: Complemental strand, 38331257 - 38331209
Alignment:
Q  27 ttgttagtgctatactgtatcgatccaaaaaagaagcattatatccaaa 75  Q
    ||||||||| |||||| |||||||||||||||||| || ||||||||||    
T  38331257 ttgttagtgatatactatatcgatccaaaaaagaatcactatatccaaa 38331209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 397 - 433
Target Start/End: Complemental strand, 47654742 - 47654706
Alignment:
Q  397 tatcggtgcagaatacgcagggtatacgatacgtcat 433  Q
    |||||||||||||||||||||| ||||||||||||||    
T  47654742 tatcggtgcagaatacgcaggggatacgatacgtcat 47654706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 75
Target Start/End: Original strand, 2472736 - 2472783
Alignment:
Q  28 tgttagtgctatactgtatcgatccaaaaaagaagcattatatccaaa 75  Q
    ||||||||||||||| ||||||||  ||||||||||| ||||||||||    
T  2472736 tgttagtgctatactttatcgatcagaaaaagaagcactatatccaaa 2472783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 349 - 455
Target Start/End: Original strand, 32381069 - 32381175
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    ||||| || ||||||||||| ||||||||| || |||||||   || |||| ||||||  ||| |||||| ||||| ||  |||||||| || |||||||    
T  32381069 ttaatcttcggatactctcctgatacgtattgggaagtatcagacaaatattggtgcatgatatgcaggggatacggtatatcatccattttaaagtatc 32381168  T
Q  449 ggggctt 455  Q
    |||||||    
T  32381169 ggggctt 32381175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 349 - 455
Target Start/End: Original strand, 41675999 - 41676105
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    ||||| || ||||||||| || |||| |||  | ||||||||  ||| ||||||||||  |||||||||  ||||| |||||||||||| || || ||||    
T  41675999 ttaatcttcggatactcttccaatacatattaggaagtatcggacaggtatcggtgcatgatacgcaggagatacggtacgtcatccattttaaaatatc 41676098  T
Q  449 ggggctt 455  Q
    |||||||    
T  41676099 ggggctt 41676105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 288 - 333
Target Start/End: Original strand, 13012944 - 13012989
Alignment:
Q  288 cacaagtatccgtgtgtatcaggacgtatcggaaaattattttctt 333  Q
    |||||| ||| ||| ||||| |||||||||||||||||||||||||    
T  13012944 cacaagaatcagtgcgtatcgggacgtatcggaaaattattttctt 13012989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 24 - 64
Target Start/End: Complemental strand, 14167356 - 14167316
Alignment:
Q  24 acattgttagtgctatactgtatcgatccaaaaaagaagca 64  Q
    |||||||||||| |||||| ||||||||||| |||||||||    
T  14167356 acattgttagtgttatactatatcgatccaagaaagaagca 14167316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 409 - 457
Target Start/End: Complemental strand, 24849412 - 24849364
Alignment:
Q  409 atacgcagggtatacgatacgtcatccatcttgaagtatcggggcttca 457  Q
    |||||||||| ||||| ||||||||| || |||||||||||| ||||||    
T  24849412 atacgcaggggatacggtacgtcatctattttgaagtatcggagcttca 24849364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 27 - 75
Target Start/End: Original strand, 52895001 - 52895049
Alignment:
Q  27 ttgttagtgctatactgtatcgatccaaaaaagaagcattatatccaaa 75  Q
    ||||||||| |||||| ||||||||||||||| || || ||||||||||    
T  52895001 ttgttagtgatatactatatcgatccaaaaaaaaatcactatatccaaa 52895049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 165; Significance: 5e-88; HSPs: 84)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 165; E-Value: 5e-88
Query Start/End: Original strand, 16 - 248
Target Start/End: Complemental strand, 6028920 - 6028689
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattatatccaaagtggagggcaaccattttggaagaaaaagttgaaacccta 115  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||| ||| ||||| ||||||||||||||||||||||||    
T  6028920 caaaaggaacattgttagtgctatactatatcgatccaaaaaagaagcactatatccaaagtggaaggcgaccatcttggaagaaaaagttgaaacccta 6028821  T
Q  116 attttttaaaaaggggaagatgaaattgtttatgtggtatggtgtgggtcgtactggcaccaaagaaagataaaggaaatgtatatatattatagtaata 215  Q
    ||||||||||||||||||||||||||||||| | |||||||||||||||||||||| ||||||| |||||||||||||||| |||||||| || ||||||    
T  6028820 attttttaaaaaggggaagatgaaattgtttctatggtatggtgtgggtcgtactgacaccaaataaagataaaggaaatgaatatatatcatggtaata 6028721  T
Q  216 tgatgattttattcttatggttttttcttattt 248  Q
    | ||| ||||||||||||  |||||||||||||    
T  6028720 taatgtttttattcttat-tttttttcttattt 6028689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 16 - 225
Target Start/End: Complemental strand, 19436682 - 19436473
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattatatccaaagtggagggcaaccattttggaagaaaaagttgaaacccta 115  Q
    ||||||||||||||||| ||||||||| ||||||||||||||||||||| |||||| |||||||| ||| ||||||||| ||||||||||||||||||||    
T  19436682 caaaaggaacattgttaatgctatactatatcgatccaaaaaagaagcactatatctaaagtggaaggcgaccattttgaaagaaaaagttgaaacccta 19436583  T
Q  116 attttttaaaaaggggaagatgaaattgtttatgtggtatggtgtgggtcgtactggcaccaaagaaagataaaggaaatgtatatatattatagtaata 215  Q
    ||||||||||||||||||||||||||||||| | |||||||||||||||| |||  ||||||||||||||||||||||||||||||||||||||||||||    
T  19436582 attttttaaaaaggggaagatgaaattgtttctatggtatggtgtgggtcatacctgcaccaaagaaagataaaggaaatgtatatatattatagtaata 19436483  T
Q  216 tgatgatttt 225  Q
    | ||| ||||    
T  19436482 taatgttttt 19436473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 16 - 225
Target Start/End: Complemental strand, 19572831 - 19572622
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattatatccaaagtggagggcaaccattttggaagaaaaagttgaaacccta 115  Q
    ||||||||||||||||| ||||||||| ||||||||||||||||||||| |||||| |||||||| ||| ||||||||| ||||||||||||||||||||    
T  19572831 caaaaggaacattgttaatgctatactatatcgatccaaaaaagaagcactatatctaaagtggaaggcgaccattttgaaagaaaaagttgaaacccta 19572732  T
Q  116 attttttaaaaaggggaagatgaaattgtttatgtggtatggtgtgggtcgtactggcaccaaagaaagataaaggaaatgtatatatattatagtaata 215  Q
    ||||||||||||||||||||||||||||||| | |||||||||||||||| |||  ||||||||||||||||||||||||||||||||||||||||||||    
T  19572731 attttttaaaaaggggaagatgaaattgtttctatggtatggtgtgggtcatacctgcaccaaagaaagataaaggaaatgtatatatattatagtaata 19572632  T
Q  216 tgatgatttt 225  Q
    | ||| ||||    
T  19572631 taatgttttt 19572622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 16 - 233
Target Start/End: Original strand, 19947663 - 19947880
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattatatccaaagtggagggcaaccattttggaagaaaaagttgaaacccta 115  Q
    |||||| |||||||||| || |||||| ||||||||||||||||||||| ||||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  19947663 caaaagaaacattgttaatgttatactatatcgatccaaaaaagaagcactatatccaaagtggaaggcgaccattttggaagaaaaagttgaaacccta 19947762  T
Q  116 attttttaaaaaggggaagatgaaattgtttatgtggtatggtgtgggtcgtactggcaccaaagaaagataaaggaaatgtatatatattatagtaata 215  Q
    |||||||||||||||||| |||||||||||| ||||||||||||||||||||| || |||||||||| ||||||||||||||||||||||| ||||||||    
T  19947763 attttttaaaaaggggaatatgaaattgtttctgtggtatggtgtgggtcgtattgacaccaaagaatgataaaggaaatgtatatatattgtagtaata 19947862  T
Q  216 tgatgattttattcttat 233  Q
    | ||  ||||||||||||    
T  19947863 taatatttttattcttat 19947880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 23 - 233
Target Start/End: Complemental strand, 42949492 - 42949282
Alignment:
Q  23 aacattgttagtgctatactgtatcgatccaaaaaagaagcattatatccaaagtggagggcaaccattttggaagaaaaagttgaaaccctaatttttt 122  Q
    |||||||||||||| ||||| ||||||||||||||||||||| ||||||||||||||| | | ||||||||| ||||||||||||||||| |||||||||    
T  42949492 aacattgttagtgcgatactatatcgatccaaaaaagaagcactatatccaaagtggaagacgaccattttgaaagaaaaagttgaaaccttaatttttt 42949393  T
Q  123 aaaaaggggaagatgaaattgtttatgtggtatggtgtgggtcgtactggcaccaaagaaagataaaggaaatgtatatatattatagtaatatgatgat 222  Q
     ||||| ||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||| |||||||||||||||||||||||||| ||| |    
T  42949392 taaaagaggaagatgaaattgtttatgtggtatggtgtggatcgtactggcacccaagaaagataaaagaaatgtatatatattatagtaatataatgtt 42949293  T
Q  223 tttattcttat 233  Q
    |||||||||||    
T  42949292 tttattcttat 42949282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 16 - 205
Target Start/End: Complemental strand, 25022584 - 25022391
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattatatccaaagtggagggcaaccattttggaag----aaaaagttgaaac 111  Q
    ||||| |||||||| || ||||||||| ||| |||||||||||||| || ||||||||||||||| ||| ||||||||||||     |||||||||||||    
T  25022584 caaaaagaacattgataatgctatactatattgatccaaaaaagaaacactatatccaaagtggaaggcgaccattttggaaagaaaaaaaagttgaaac 25022485  T
Q  112 cctaattttttaaaaaggggaagatgaaattgtttatgtggtatggtgtgggtcgtactggcaccaaagaaagataaaggaaatgtatatatat 205  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | ||||||||| |||||||||    
T  25022484 cctaattttttaaaaaggggaagatgaaattgtttatgtggtatggtgtgggtcgtactggcaccaaaaaaaaaaaaaggaaatatatatatat 25022391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 16 - 241
Target Start/End: Complemental strand, 32877885 - 32877657
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattatatccaaagtggagggca----accattttggaagaaaaagttgaaac 111  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||| ||  | |    ||||||||||||||||||||||||||    
T  32877885 caaaaggaacattgttagtgctatactatatcgatccaaaaaagaagcactatatccaaagttgaaagaaggtgaccattttggaagaaaaagttgaaac 32877786  T
Q  112 cctaattttttaaaaaggggaagatgaaattgtttatgtggtatggtgtgggtcgtactggcaccaaagaaagataaag----gaaatgtatatatatta 207  Q
    |||||||||||| |||||||||||||||||||||| ||     ||||||||||||||||||||||||||||||||||||     | || |||||||||||    
T  32877785 cctaattttttagaaaggggaagatgaaattgtttctg-----tggtgtgggtcgtactggcaccaaagaaagataaagaatatatatatatatatatta 32877691  T
Q  208 tagtaatatgatgattttattcttatggtttttt 241  Q
    ||| ||||| ||| |||||| |||||| ||||||    
T  32877690 tagcaatatcatgtttttatacttatgttttttt 32877657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 71 - 233
Target Start/End: Complemental strand, 4246301 - 4246139
Alignment:
Q  71 ccaaagtggagggcaaccattttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaaattgtttatgtggtatggtgtgggtcgtact 170  Q
    |||||||||| ||| |||| ||||||||||||||||| ||||||||||| ||| |||||| |||||| ||||| || |||||| ||||||||||||||||    
T  4246301 ccaaagtggacggcgaccactttggaagaaaaagttggaaccctaatttcttagaaagggaaagatgcaattggttgtgtggtgtggtgtgggtcgtact 4246202  T
Q  171 ggcaccaaagaaagataaaggaaatgtatatatattatagtaatatgatgattttattcttat 233  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||    
T  4246201 ggcaccaaagaaagataaaggaaatgtatatatattatagtaatataatgtttttattcttat 4246139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 71 - 233
Target Start/End: Original strand, 34901115 - 34901277
Alignment:
Q  71 ccaaagtggagggcaaccattttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaaattgtttatgtggtatggtgtgggtcgtact 170  Q
    |||||||||| ||| |||| ||||||||||||||||||||||||||||| ||| |||||| |||||| ||||| || |||||| ||||||||||||||||    
T  34901115 ccaaagtggacggcgaccactttggaagaaaaagttgaaaccctaatttcttagaaagggaaagatgcaattggttgtgtggtgtggtgtgggtcgtact 34901214  T
Q  171 ggcaccaaagaaagataaaggaaatgtatatatattatagtaatatgatgattttattcttat 233  Q
    ||||||||||||||||||||||||| |||||||||||||||||||| ||| ||||||||||||    
T  34901215 ggcaccaaagaaagataaaggaaatatatatatattatagtaatataatgtttttattcttat 34901277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 71 - 233
Target Start/End: Original strand, 45216966 - 45217128
Alignment:
Q  71 ccaaagtggagggcaaccattttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaaattgtttatgtggtatggtgtgggtcgtact 170  Q
    |||||||||| ||  |||| ||||||||||||||||||||||||||||| |||  ||||| |||||| ||||| || |||||| ||||||||||||||||    
T  45216966 ccaaagtggacggtgaccactttggaagaaaaagttgaaaccctaatttcttagtaagggaaagatgcaattggttgtgtggtgtggtgtgggtcgtact 45217065  T
Q  171 ggcaccaaagaaagataaaggaaatgtatatatattatagtaatatgatgattttattcttat 233  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||    
T  45217066 ggcaccaaagaaagataaaggaaatgtatatatattatagtaatataatgtttttattcttat 45217128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 71 - 233
Target Start/End: Original strand, 43771438 - 43771600
Alignment:
Q  71 ccaaagtggagggcaaccattttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaaattgtttatgtggtatggtgtgggtcgtact 170  Q
    ||||||||||  || |||| ||||||||||||||||||||||||||||| ||| |||||| |||||| ||||| || |||||| ||||||||||||||||    
T  43771438 ccaaagtggacagcgaccactttggaagaaaaagttgaaaccctaatttcttagaaagggaaagatgcaattggttgtgtggtgtggtgtgggtcgtact 43771537  T
Q  171 ggcaccaaagaaagataaaggaaatgtatatatattatagtaatatgatgattttattcttat 233  Q
    | ||||||||| |||||||||||||||||||||||||||||||||| ||| ||||||||||||    
T  43771538 gacaccaaagatagataaaggaaatgtatatatattatagtaatataatgtttttattcttat 43771600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 71 - 231
Target Start/End: Original strand, 28876311 - 28876471
Alignment:
Q  71 ccaaagtggagggcaaccattttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaaattgtttatgtggtatggtgtgggtcgtact 170  Q
    |||||||||| ||| |||| |||| |||||||||||||||||||||||| ||| |||||| |||||| ||||| || |||||| |||||||||||||| |    
T  28876311 ccaaagtggacggccaccactttgaaagaaaaagttgaaaccctaatttcttagaaagggaaagatgcaattggttgtgtggtgtggtgtgggtcgtatt 28876410  T
Q  171 ggcaccaaagaaagataaaggaaatgtatatatattatagtaatatgatgattttattctt 231  Q
    ||||||||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||    
T  28876411 ggcaccaaagaaagataaaagaaatgtatatatattatagtaatataatgtttttattctt 28876471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 71 - 233
Target Start/End: Complemental strand, 5539794 - 5539632
Alignment:
Q  71 ccaaagtggagggcaaccattttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaaattgtttatgtggtatggtgtgggtcgtact 170  Q
    |||||||||| ||  |||| |||||||||||||||||||||  |||||| ||  |||||| |||||| ||||| || |||||| ||||||||||||||||    
T  5539794 ccaaagtggacggtgaccactttggaagaaaaagttgaaactttaatttcttggaaagggaaagatgcaattggttgtgtggtgtggtgtgggtcgtact 5539695  T
Q  171 ggcaccaaagaaagataaaggaaatgtatatatattatagtaatatgatgattttattcttat 233  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||    
T  5539694 ggcaccaaagaaagataaaggaaatgtatatatattatagtaatataatgtttttattcttat 5539632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 71 - 231
Target Start/End: Complemental strand, 36483804 - 36483649
Alignment:
Q  71 ccaaagtggagggcaaccattttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaaattgtttatgtggtatggtgtgggtcgtact 170  Q
    |||||||||| ||| |||| ||||||||||||||||||||||||||||| ||| |||||| |||||| ||||||||     || ||||||||||||||||    
T  36483804 ccaaagtggacggcgaccactttggaagaaaaagttgaaaccctaatttcttagaaagggaaagatgcaattgttt-----gtgtggtgtgggtcgtact 36483710  T
Q  171 ggcaccaaagaaagataaaggaaatgtatatatattatagtaatatgatgattttattctt 231  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| ||||    
T  36483709 ggcaccaaagaaagataaaggaaatgtatatatattatagtaatataatgtttttactctt 36483649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 349 - 457
Target Start/End: Complemental strand, 6028595 - 6028487
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    ||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| |||||||||| ||||| |||||||||||| ||||||||||    
T  6028595 ttaatatttggatactctcccgatatgtatcggaaagtatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatc 6028496  T
Q  449 ggggcttca 457  Q
    |||||||||    
T  6028495 ggggcttca 6028487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 349 - 457
Target Start/End: Complemental strand, 32877545 - 32877437
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||| ||||||||||| |||||||||| |||||||||||||||||| ||||||||||    
T  32877545 ttaatatttggatactctcccgatacgtatcgggaagtatcgggcaggtatcggtgcaggatacgcaggggatacgatacgtcatccattttgaagtatc 32877446  T
Q  449 ggggcttca 457  Q
    |||||||||    
T  32877445 ggggcttca 32877437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 349 - 457
Target Start/End: Original strand, 22201347 - 22201455
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    |||||||||||||||||||| ||||||||||||||||||||| |||| ||||||||||| |||||||||| |||||||||||||||||| ||||||||||    
T  22201347 ttaatatttggatactctccggatacgtatcggaaagtatcgggcaggtatcggtgcaggatacgcaggggatacgatacgtcatccattttgaagtatc 22201446  T
Q  449 ggggcttca 457  Q
    ||| |||||    
T  22201447 gggacttca 22201455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 71 - 231
Target Start/End: Complemental strand, 37668949 - 37668795
Alignment:
Q  71 ccaaagtggagggcaaccattttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaaattgtttatgtggtatggtgtgggtcgtact 170  Q
    |||||||||| ||| |||| |||||||||||||||||||||||||| || ||| |||| | |||||| ||||||||     || ||||||||||||||||    
T  37668949 ccaaagtggacggcgaccactttggaagaaaaagttgaaaccctaaattcttataaagagaaagatgcaattgttt-----gtgtggtgtgggtcgtact 37668855  T
Q  171 ggcaccaaagaaagataaaggaaatgtatatatattatagtaatatgatgattttattctt 231  Q
    |||||||||| ||||||||||||||||||||||||||||||||||| ||| ||||| ||||    
T  37668854 ggcaccaaag-aagataaaggaaatgtatatatattatagtaatataatgtttttactctt 37668795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 349 - 457
Target Start/End: Original strand, 34901392 - 34901500
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    ||||||||| |||||||||| ||||||||||||||||||||| |||| ||||||||||| |||||||||| ||||| |||||||||||| ||||||||||    
T  34901392 ttaatatttagatactctccggatacgtatcggaaagtatcgggcaggtatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatc 34901491  T
Q  449 ggggcttca 457  Q
    |||||||||    
T  34901492 ggggcttca 34901500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 349 - 457
Target Start/End: Complemental strand, 36483543 - 36483435
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    |||||||||||||||||| | ||||||||||||||||||||| |||| ||||||||||| |||||||||| ||||| |||||||||||| ||||||||||    
T  36483543 ttaatatttggatactcttcggatacgtatcggaaagtatcgggcaggtatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatc 36483444  T
Q  449 ggggcttca 457  Q
    |||||||||    
T  36483443 ggggcttca 36483435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 349 - 455
Target Start/End: Original strand, 19948006 - 19948112
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||| ||||||||||| |||||||||| ||| |||||||||||||| ||||||||||    
T  19948006 ttaatatttggatactctcccggtacgtatcgggaagtatcgagcaggtatcggtgcaggatacgcaggggatatgatacgtcatccattttgaagtatc 19948105  T
Q  449 ggggctt 455  Q
     ||||||    
T  19948106 agggctt 19948112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 352 - 457
Target Start/End: Original strand, 2872923 - 2873028
Alignment:
Q  352 atatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatcggg 451  Q
    ||||||||||||||||| |||||||||||| |||||||| |||| ||||||||||| |||||||||| ||||| |||||||||||| |||||||||||||    
T  2872923 atatttggatactctccggatacgtatcgggaagtatcgggcaggtatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggg 2873022  T
Q  452 gcttca 457  Q
    ||||||    
T  2873023 gcttca 2873028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 71 - 183
Target Start/End: Original strand, 32638681 - 32638793
Alignment:
Q  71 ccaaagtggagggcaaccattttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaaattgtttatgtggtatggtgtgggtcgtact 170  Q
    |||||||||| ||| |||| |||||||||||| |||||||||||||||| ||| |||||| |||||| |||||||| |||||| ||||||||||||||||    
T  32638681 ccaaagtggacggcgaccactttggaagaaaatgttgaaaccctaatttcttagaaagggaaagatgcaattgtttgtgtggtgtggtgtgggtcgtact 32638780  T
Q  171 ggcaccaaagaaa 183  Q
    |||||||||||||    
T  32638781 ggcaccaaagaaa 32638793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 349 - 457
Target Start/End: Complemental strand, 32759481 - 32759373
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    |||||||||||||||||||| |||||||||||| |||||||| |||| ||||||||||| |||||||||| ||||| |||||||||||| ||||||||||    
T  32759481 ttaatatttggatactctccagatacgtatcgggaagtatcgggcaggtatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatc 32759382  T
Q  449 ggggcttca 457  Q
    | |||||||    
T  32759381 gaggcttca 32759373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 349 - 457
Target Start/End: Complemental strand, 16384725 - 16384617
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    |||||||||||||||||| | |||||||||||| |||||||| |||| ||||||||||| |||| ||||| ||||| |||||||||||| ||||||||||    
T  16384725 ttaatatttggatactcttcggatacgtatcgggaagtatcgggcaggtatcggtgcaggatactcaggggatacggtacgtcatccattttgaagtatc 16384626  T
Q  449 ggggcttca 457  Q
    |||||||||    
T  16384625 ggggcttca 16384617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 349 - 457
Target Start/End: Complemental strand, 13422316 - 13422208
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    ||||||||||||||||||||  ||||||||||| |||||||  |||| ||||||||||| ||| |||||| ||||| |||||||||||| ||||||||||    
T  13422316 ttaatatttggatactctccgtatacgtatcgggaagtatcaggcaggtatcggtgcaggatatgcaggggatacggtacgtcatccattttgaagtatc 13422217  T
Q  449 ggggcttca 457  Q
    |||||||||    
T  13422216 ggggcttca 13422208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 125 - 233
Target Start/End: Complemental strand, 13422532 - 13422424
Alignment:
Q  125 aaaggggaagatgaaattgtttatgtggtatggtgtgggtcgtactggcaccaaagaaagataaaggaaatgtatatatattatagtaatatgatgattt 224  Q
    |||||| |||||| ||||| || |||||| ||||||||||||||  |||||| |||||||||||||||||||||||||||| |||||||||| ||| |||    
T  13422532 aaagggaaagatgcaattgattgtgtggtgtggtgtgggtcgtatgggcaccgaagaaagataaaggaaatgtatatatatcatagtaatataatgtttt 13422433  T
Q  225 tattcttat 233  Q
    |||||||||    
T  13422432 tattcttat 13422424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 349 - 457
Target Start/End: Complemental strand, 25022233 - 25022125
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    ||||||||||||||||||||||||||||||| | |||||||| |||| ||||||||||| |||||||||  ||||| || ||||||||| |||||||||     
T  25022233 ttaatatttggatactctcccgatacgtatcaggaagtatcgggcaggtatcggtgcaggatacgcaggagatacggtatgtcatccattttgaagtatt 25022134  T
Q  449 ggggcttca 457  Q
    |||||||||    
T  25022133 ggggcttca 25022125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 349 - 457
Target Start/End: Original strand, 28876576 - 28876684
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    |||||||||||||||||||  |||||||||||  |||||||| |||| ||||||||||| |||||||||| ||||  |||||||||||| ||||||||||    
T  28876576 ttaatatttggatactctctggatacgtatcgagaagtatcgggcaggtatcggtgcaggatacgcaggggatacagtacgtcatccattttgaagtatc 28876675  T
Q  449 ggggcttca 457  Q
    |||||||||    
T  28876676 ggggcttca 28876684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 148 - 233
Target Start/End: Complemental strand, 16384925 - 16384840
Alignment:
Q  148 tgtggtatggtgtgggtcgtactggcaccaaagaaagataaaggaaatgtatatatattatagtaatatgatgattttattcttat 233  Q
    |||||| |||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||    
T  16384925 tgtggtgtggtgtggatcgtacgggcaccaaagaaagataaaggaaatgtatatatattatagtaatataatttttttattcttat 16384840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 349 - 457
Target Start/End: Complemental strand, 4246048 - 4245940
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    |||||||||||||||||| | |||||||||||| |||||||| |||| ||||||||||| ||| |||||| ||||| ||||||||| || |||||| |||    
T  4246048 ttaatatttggatactcttcggatacgtatcgggaagtatcgggcaggtatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagcatc 4245949  T
Q  449 ggggcttca 457  Q
    |||||||||    
T  4245948 ggggcttca 4245940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 349 - 457
Target Start/End: Original strand, 43771714 - 43771822
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    |||||||||||||||||||| |||||||||| | ||||||||  ||  ||||||||||| |||||||||| ||||| |||||||||||| ||||||||||    
T  43771714 ttaatatttggatactctccggatacgtatcaggaagtatcggacatgtatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatc 43771813  T
Q  449 ggggcttca 457  Q
    |||| ||||    
T  43771814 ggggtttca 43771822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 349 - 457
Target Start/End: Original strand, 45217230 - 45217338
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    |||||||||||||||||||| ||||||||||||||| |||||  ||| ||||||||||| |||||||||| |||| |||  |||||||| || |||||||    
T  45217230 ttaatatttggatactctccggatacgtatcggaaaatatcggacaggtatcggtgcaggatacgcaggggatacaatatatcatccattttaaagtatc 45217329  T
Q  449 ggggcttca 457  Q
    |||||||||    
T  45217330 ggggcttca 45217338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 148 - 233
Target Start/End: Original strand, 2872730 - 2872815
Alignment:
Q  148 tgtggtatggtgtgggtcgtactggcaccaaagaaagataaaggaaatgtatatatattatagtaatatgatgattttattcttat 233  Q
    |||||| |||||||||||||||| ||||||||  ||||||||||||||||||||||||||||||||||| ||  ||||||||||||    
T  2872730 tgtggtgtggtgtgggtcgtactagcaccaaaataagataaaggaaatgtatatatattatagtaatataatatttttattcttat 2872815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 349 - 457
Target Start/End: Original strand, 12580563 - 12580671
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    |||||||||||||||||||| |||||||||||| |||||||   ||| ||||||||||| |||||||||  ||||| ||| ||||| || ||||||||||    
T  12580563 ttaatatttggatactctccggatacgtatcgggaagtatcagacagttatcggtgcaggatacgcaggagatacggtacatcatctattttgaagtatc 12580662  T
Q  449 ggggcttca 457  Q
    |||||||||    
T  12580663 ggggcttca 12580671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 349 - 457
Target Start/End: Complemental strand, 27886298 - 27886190
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    ||||| || ||||||||||| |||||||||||| ||||||| | ||| ||||||||||| ||| |||||| |||| ||||||||||||| ||||||||||    
T  27886298 ttaatcttcggatactctcctgatacgtatcgggaagtatcaaccaggtatcggtgcaggatatgcagggaatacaatacgtcatccattttgaagtatc 27886199  T
Q  449 ggggcttca 457  Q
    ||| |||||    
T  27886198 gggacttca 27886190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 349 - 457
Target Start/End: Complemental strand, 27944956 - 27944848
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    ||||| || ||||||||||| |||||||||||| ||||||| | ||| ||||||||||| ||| |||||| |||| ||||||||||||| ||||||||||    
T  27944956 ttaatcttcggatactctcctgatacgtatcgggaagtatcaaccaggtatcggtgcaggatatgcagggaatacaatacgtcatccattttgaagtatc 27944857  T
Q  449 ggggcttca 457  Q
    ||| |||||    
T  27944856 gggacttca 27944848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 349 - 457
Target Start/End: Complemental strand, 37372367 - 37372259
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    ||||| || ||||||||||| |||||||||||| |||||||   ||| |||| |||||| |||||||||  |||||||||||||||||| ||||||||||    
T  37372367 ttaatcttcggatactctcctgatacgtatcgggaagtatcagacaggtatcagtgcaggatacgcaggagatacgatacgtcatccattttgaagtatc 37372268  T
Q  449 ggggcttca 457  Q
    || ||||||    
T  37372267 ggagcttca 37372259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 348 - 434
Target Start/End: Original strand, 30804754 - 30804840
Alignment:
Q  348 attaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatc 434  Q
    ||||||||| ||||||||||| ||||||||||||||||||||||||| |||| | ||||  ||||||||| ||||| ||||||||||    
T  30804754 attaatattcggatactctcctgatacgtatcggaaagtatcgagcaaatattgatgcaagatacgcaggatatacaatacgtcatc 30804840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 71 - 191
Target Start/End: Original strand, 12580272 - 12580387
Alignment:
Q  71 ccaaagtggagggcaaccattttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaaattgtttatgtggtatggtgtgggtcgtact 170  Q
    ||||||||||  || |||| ||||||||||||||||||||||||||||| ||| |||||  |||||| ||||||||     || |||||||| |||||||    
T  12580272 ccaaagtggacagcgaccactttggaagaaaaagttgaaaccctaatttcttagaaaggaaaagatgcaattgttt-----gtgtggtgtggatcgtact 12580366  T
Q  171 ggcaccaaagaaagataaagg 191  Q
    ||| ||||||| |||||||||    
T  12580367 ggctccaaagagagataaagg 12580387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 349 - 457
Target Start/End: Complemental strand, 29355731 - 29355623
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    ||||| || ||||||||||| | |||||||||| ||||||| ||||| ||||| ||||| |||| ||||| ||| |||| ||||||||| ||||||||||    
T  29355731 ttaatcttcggatactctcctgctacgtatcgggaagtatcaagcagctatcgatgcaggatacccaggggatatgatatgtcatccattttgaagtatc 29355632  T
Q  449 ggggcttca 457  Q
     ||||||||    
T  29355631 agggcttca 29355623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 359 - 452
Target Start/End: Original strand, 5818331 - 5818424
Alignment:
Q  359 gatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatcgggg 452  Q
    |||||||||| ||||| |||||| || ||||  |||| ||||||||||| ||||||| |  |||||||||||||||||| ||||||||||||||    
T  5818331 gatactctcctgatacatatcgggaaatatcatgcaggtatcggtgcaggatacgcaagtgatacgatacgtcatccattttgaagtatcgggg 5818424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 349 - 457
Target Start/End: Complemental strand, 37668690 - 37668582
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    |||||||||||||| | |||  ||| ||||||| |||||||   ||||||| ||||||  |||||||||| ||||| |||||||||||| ||||||||||    
T  37668690 ttaatatttggatattatccgtatatgtatcgggaagtatcagacagatattggtgcaagatacgcagggaatacggtacgtcatccattttgaagtatc 37668591  T
Q  449 ggggcttca 457  Q
    |||| ||||    
T  37668590 ggggtttca 37668582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 16 - 75
Target Start/End: Original strand, 12579826 - 12579884
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattatatccaaa 75  Q
    |||||||||| |||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  12579826 caaaaggaac-ttgttagtgctatactatatcgatccaaaaaagaagcactatatccaaa 12579884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 16 - 75
Target Start/End: Original strand, 27108996 - 27109055
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattatatccaaa 75  Q
    ||||||||| |||||||||| |||||| ||||||||||||||||||||| ||||||||||    
T  27108996 caaaaggaaaattgttagtgttatactatatcgatccaaaaaagaagcactatatccaaa 27109055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 16 - 75
Target Start/End: Complemental strand, 32760183 - 32760125
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattatatccaaa 75  Q
    |||||||||| |||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  32760183 caaaaggaac-ttgttagtgctatactatatcgatccaaaaaagaagcactatatccaaa 32760125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 16 - 75
Target Start/End: Complemental strand, 36484252 - 36484194
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattatatccaaa 75  Q
    |||||||||| |||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  36484252 caaaaggaac-ttgttagtgctatactatatcgatccaaaaaagaagcactatatccaaa 36484194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 175 - 233
Target Start/End: Original strand, 12580390 - 12580448
Alignment:
Q  175 ccaaagaaagataaaggaaatgtatatatattatagtaatatgatgattttattcttat 233  Q
    ||||||| |||||||||| ||||||||||||||||||||||| ||| ||||||||||||    
T  12580390 ccaaagagagataaaggatatgtatatatattatagtaatataatgtttttattcttat 12580448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 375 - 457
Target Start/End: Complemental strand, 19436356 - 19436274
Alignment:
Q  375 gtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatcggggcttca 457  Q
    ||||||| ||||||||  ||| ||||||||||| ||||||| || ||||| |||||||||||| |||||||||||| ||||||    
T  19436356 gtatcgggaagtatcggtcaggtatcggtgcaggatacgcaagggatacggtacgtcatccattttgaagtatcggagcttca 19436274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 375 - 457
Target Start/End: Complemental strand, 19572505 - 19572423
Alignment:
Q  375 gtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatcggggcttca 457  Q
    ||||||| ||||||||  ||| ||||||||||| ||||||| || ||||| |||||||||||| |||||||||||| ||||||    
T  19572505 gtatcgggaagtatcggtcaggtatcggtgcaggatacgcaagggatacggtacgtcatccattttgaagtatcggagcttca 19572423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 349 - 458
Target Start/End: Complemental strand, 32425029 - 32424919
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    ||||| || ||||||||| | |||||||||||  |||||||   ||| ||||||||||| ||||||| || ||||| |||||||||||| ||||||||||    
T  32425029 ttaatcttcggatactcttctgatacgtatcgtgaagtatcagacaggtatcggtgcaggatacgcaagggatacggtacgtcatccattttgaagtatc 32424930  T
Q  449 gg-ggcttcat 458  Q
    || ||||||||    
T  32424929 ggaggcttcat 32424919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 349 - 458
Target Start/End: Original strand, 32638876 - 32638975
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    |||||||||||||||||||| ||||||||||||          |||| ||||||||||| |||||||||| ||||| |||||||||||| ||||||||||    
T  32638876 ttaatatttggatactctccggatacgtatcgg----------gcaggtatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatc 32638965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 349 - 407
Target Start/End: Complemental strand, 42949238 - 42949180
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcag 407  Q
    |||||||||||||||||||||||||||||||| ||||||||   |||||||||||||||    
T  42949238 ttaatatttggatactctcccgatacgtatcgaaaagtatcagacagatatcggtgcag 42949180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 370 - 455
Target Start/End: Complemental strand, 32768 - 32683
Alignment:
Q  370 gatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatcggggctt 455  Q
    |||||||||| |||||||||| |||||||||| ||||| |||| ||| | ||| ||||||||| |||| || ||||||||||||||    
T  32768 gatacgtatcagaaagtatcgggcagatatcgatgcaggatacacagaggatatgatacgtcaaccattttaaagtatcggggctt 32683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 15 - 75
Target Start/End: Original strand, 32638503 - 32638562
Alignment:
Q  15 tcaaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattatatccaaa 75  Q
    ||||||||||| |||||||||||||||  ||||||||||||||||||||| ||||||||||    
T  32638503 tcaaaaggaac-ttgttagtgctatacaatatcgatccaaaaaagaagcactatatccaaa 32638562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 16 - 75
Target Start/End: Original strand, 28875855 - 28875913
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattatatccaaa 75  Q
    |||||||||| |||||||||||||||| |||||||||||||||||| || ||||||||||    
T  28875855 caaaaggaac-ttgttagtgctatactatatcgatccaaaaaagaatcactatatccaaa 28875913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 16 - 75
Target Start/End: Original strand, 45216510 - 45216568
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattatatccaaa 75  Q
    |||||||||| ||||||||| |||||| |||||||||||||||||| |||||||||||||    
T  45216510 caaaaggaac-ttgttagtgttatactatatcgatccaaaaaagaatcattatatccaaa 45216568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 3892259 - 3892206
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattata 69  Q
    |||||| |||||||||||||||||||| |||| |||||||||||||||| ||||    
T  3892259 caaaagaaacattgttagtgctatactatatcaatccaaaaaagaagcactata 3892206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 381 - 458
Target Start/End: Complemental strand, 7411712 - 7411635
Alignment:
Q  381 gaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatcggggcttcat 458  Q
    |||||||||| |||| ||||| ||||| |||| ||| | |||||||||| ||||||| |||||||||||| |||||||    
T  7411712 gaaagtatcgggcaggtatcgatgcaggatacacagtggatacgatacgccatccattttgaagtatcggagcttcat 7411635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 364 - 457
Target Start/End: Complemental strand, 27968196 - 27968103
Alignment:
Q  364 tctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatcggggcttca 457  Q
    ||||| |||||||||||| |||||||   ||| ||||||||||| ||| |||||| |||| |||||||||| || || |||||||||| |||||    
T  27968196 tctcctgatacgtatcgggaagtatcagccaggtatcggtgcaggatatgcagggaatacaatacgtcatctatttttaagtatcgggacttca 27968103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 364 - 457
Target Start/End: Complemental strand, 28025182 - 28025089
Alignment:
Q  364 tctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatcggggcttca 457  Q
    ||||| |||||||||||| |||||||   ||| ||||||||||| ||| |||||| |||| |||||||||| || || |||||||||| |||||    
T  28025182 tctcctgatacgtatcgggaagtatcagccaggtatcggtgcaggatatgcagggaatacaatacgtcatctatttttaagtatcgggacttca 28025089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 349 - 457
Target Start/End: Complemental strand, 38388775 - 38388667
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    ||||| || ||||||| ||| || ||||||||  ||||||||  ||| ||||||||||| |||||||| | |||| ||||  ||||||| ||||||||||    
T  38388775 ttaatcttcggatactttcctgacacgtatcgagaagtatcggacaggtatcggtgcaggatacgcagaggatacaatacagcatccattttgaagtatc 38388676  T
Q  449 ggggcttca 457  Q
    |||| ||||    
T  38388675 ggggtttca 38388667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 75
Target Start/End: Complemental strand, 5540250 - 5540192
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattatatccaaa 75  Q
    |||||||||| |||||||||||||| | |||||||||||||||||| || ||||||||||    
T  5540250 caaaaggaac-ttgttagtgctatattatatcgatccaaaaaagaatcactatatccaaa 5540192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 71
Target Start/End: Original strand, 8170907 - 8170962
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattatatc 71  Q
    ||||| |||||||| |||||||||||| |||||||| |||||||||||| ||||||    
T  8170907 caaaaagaacattggtagtgctatactatatcgatctaaaaaagaagcactatatc 8170962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 348 - 458
Target Start/End: Complemental strand, 23265758 - 23265648
Alignment:
Q  348 attaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtat 447  Q
    |||||| || ||||||||||| |||||||||||| || ||| |  |||||||| ||||||||||||||||  ||||| || ||| || || || ||||||    
T  23265758 attaatcttcggatactctcctgatacgtatcgggaaatattggacagatatcagtgcagaatacgcaggagatacggtatgtcgtctattttaaagtat 23265659  T
Q  448 cggggcttcat 458  Q
      |||||||||    
T  23265658 ttgggcttcat 23265648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 288 - 330
Target Start/End: Complemental strand, 32877603 - 32877561
Alignment:
Q  288 cacaagtatccgtgtgtatcaggacgtatcggaaaattatttt 330  Q
    |||||||||||||| ||||||||| ||||||||||||||||||    
T  32877603 cacaagtatccgtgcgtatcaggatgtatcggaaaattatttt 32877561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 17 - 75
Target Start/End: Original strand, 43770995 - 43771052
Alignment:
Q  17 aaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattatatccaaa 75  Q
    ||||||||| ||||||||| |||||| |||||||||||||||||| || ||||||||||    
T  43770995 aaaaggaac-ttgttagtgttatactatatcgatccaaaaaagaatcactatatccaaa 43771052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 32897 - 32844
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattata 69  Q
    |||||| ||||||||||||| |||||| ||| ||||||||||| ||||||||||    
T  32897 caaaagaaacattgttagtgttatactatattgatccaaaaaaaaagcattata 32844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 385 - 458
Target Start/End: Complemental strand, 12357960 - 12357888
Alignment:
Q  385 gtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatcggggcttcat 458  Q
    |||||| | |||||||||||||| |||| ||| | ||||| |||||||||||| |||||||||| |||||||||    
T  12357960 gtatcgggaagatatcggtgcaggatacacagaggatacg-tacgtcatccattttgaagtatccgggcttcat 12357888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 385 - 458
Target Start/End: Complemental strand, 12359088 - 12359016
Alignment:
Q  385 gtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatcggggcttcat 458  Q
    |||||| | |||||||||||||| |||| ||| | ||||| |||||||||||| |||||||||| |||||||||    
T  12359088 gtatcgggaagatatcggtgcaggatacacagaggatacg-tacgtcatccattttgaagtatccgggcttcat 12359016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 22 - 71
Target Start/End: Complemental strand, 40412854 - 40412805
Alignment:
Q  22 gaacattgttagtgctatactgtatcgatccaaaaaagaagcattatatc 71  Q
    ||||||||||||||||||||| |||||||| |||||| ||||| ||||||    
T  40412854 gaacattgttagtgctatactatatcgatctaaaaaaaaagcactatatc 40412805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 27 - 75
Target Start/End: Complemental strand, 4246747 - 4246699
Alignment:
Q  27 ttgttagtgctatactgtatcgatccaaaaaagaagcattatatccaaa 75  Q
    ||||||||| |||||| |||||||||||||||||| || ||||||||||    
T  4246747 ttgttagtgatatactatatcgatccaaaaaagaatcactatatccaaa 4246699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 359 - 451
Target Start/End: Complemental strand, 20182471 - 20182380
Alignment:
Q  359 gatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatcggg 451  Q
    |||||||| | ||||||||||| ||||||||   ||||||| | ||||| ||| ||| || ||||  ||||||||||||||||||||||||||    
T  20182471 gatactctactgatacgtatcgaaaagtatcagacagatatag-tgcaggatatgcacgggataccgtacgtcatccatcttgaagtatcggg 20182380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 64
Target Start/End: Complemental strand, 20182684 - 20182636
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagca 64  Q
    |||||||||||||||||||| |||||| |||||||  ||||||||||||    
T  20182684 caaaaggaacattgttagtgttatactatatcgataaaaaaaagaagca 20182636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 27 - 75
Target Start/End: Original strand, 22201118 - 22201166
Alignment:
Q  27 ttgttagtgctatactgtatcgatccaaaaaagaagcattatatccaaa 75  Q
    |||||||| ||||||| |||||||||||||||||| || ||||||||||    
T  22201118 ttgttagtactatactatatcgatccaaaaaagaatcactatatccaaa 22201166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 27 - 75
Target Start/End: Original strand, 34900669 - 34900717
Alignment:
Q  27 ttgttagtgctatactgtatcgatccaaaaaagaagcattatatccaaa 75  Q
    ||||||||| |||||| |||||||||||||||||| || ||||||||||    
T  34900669 ttgttagtgatatactatatcgatccaaaaaagaatcactatatccaaa 34900717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #77
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 27 - 75
Target Start/End: Complemental strand, 37669387 - 37669339
Alignment:
Q  27 ttgttagtgctatactgtatcgatccaaaaaagaagcattatatccaaa 75  Q
    |||||||||||||| | ||| ||||||||||||||||| ||||||||||    
T  37669387 ttgttagtgctatattatattgatccaaaaaagaagcactatatccaaa 37669339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #78
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 62
Target Start/End: Original strand, 5818153 - 5818200
Alignment:
Q  15 tcaaaaggaacattgttagtgctatactgtatcgatccaaaaaagaag 62  Q
    ||||||||||||||||||||||||||||  ||| |||||||| |||||    
T  5818153 tcaaaaggaacattgttagtgctatactacatcaatccaaaacagaag 5818200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #79
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 360 - 457
Target Start/End: Complemental strand, 3892059 - 3891962
Alignment:
Q  360 atactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatcggggcttca 457  Q
    |||||||| |||||||||| ||||||||||   ||  ||||||||||  ||||| |||  |||  ||||||||||||| |||||| ||||||| ||||    
T  3892059 atactctctcgatacgtattggaaagtatcagacaagtatcggtgcatgatacgtaggagatataatacgtcatccattttgaagaatcggggtttca 3891962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #80
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 386 - 451
Target Start/End: Complemental strand, 5539505 - 5539441
Alignment:
Q  386 tatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatcggg 451  Q
    ||||| |||| ||||||||||| |||||||||| ||||  ||| |||||||| |||||||||||||    
T  5539505 tatcgggcaggtatcggtgcaggatacgcaggg-atacagtacatcatccattttgaagtatcggg 5539441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #81
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 413 - 458
Target Start/End: Complemental strand, 28737299 - 28737254
Alignment:
Q  413 gcagggtatacgatacgtcatccatcttgaagtatcggggcttcat 458  Q
    |||||| |||| ||||||||||||| ||||| ||||||||||||||    
T  28737299 gcaggggatacaatacgtcatccattttgaaatatcggggcttcat 28737254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #82
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 61
Target Start/End: Complemental strand, 38388984 - 38388939
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaa 61  Q
    ||||| |||||||||||||| |||||| ||||||| ||||||||||    
T  38388984 caaaatgaacattgttagtgttatactatatcgattcaaaaaagaa 38388939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #83
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 197 - 241
Target Start/End: Complemental strand, 25022377 - 25022333
Alignment:
Q  197 tatatatattatagtaatatgatgattttattcttatggtttttt 241  Q
    |||||||||||||||||||| ||  ||||||||||||| ||||||    
T  25022377 tatatatattatagtaatataatatttttattcttatgttttttt 25022333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #84
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 15 - 75
Target Start/End: Complemental strand, 29355936 - 29355876
Alignment:
Q  15 tcaaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattatatccaaa 75  Q
    ||||||| ||||||||||||| |||||| |||  ||  |||||||||||| ||||||||||    
T  29355936 tcaaaagaaacattgttagtgttatactatattaataaaaaaaagaagcactatatccaaa 29355876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 158; Significance: 7e-84; HSPs: 76)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 158; E-Value: 7e-84
Query Start/End: Original strand, 16 - 233
Target Start/End: Complemental strand, 5835260 - 5835043
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattatatccaaagtggagggcaaccattttggaagaaaaagttgaaacccta 115  Q
    ||||||||||||||||| ||||||||| |||||||| |||||||||||| ||||||||||||||| ||  |||| |||||||||||||||||||||||||    
T  5835260 caaaaggaacattgttaatgctatactatatcgatcaaaaaaagaagcactatatccaaagtggaaggggaccactttggaagaaaaagttgaaacccta 5835161  T
Q  116 attttttaaaaaggggaagatgaaattgtttatgtggtatggtgtgggtcgtactggcaccaaagaaagataaaggaaatgtatatatattatagtaata 215  Q
    ||||||||||||||||||||||||||||||| ||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5835160 attttttaaaaaggggaagatgaaattgtttctgtggtatgatgtaggtcgtactggcaccaaagaaagataaaggaaatgtatatatattatagtaata 5835061  T
Q  216 tgatgattttattcttat 233  Q
    | ||  ||||||| ||||    
T  5835060 taatatttttatttttat 5835043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 71 - 233
Target Start/End: Original strand, 3403318 - 3403480
Alignment:
Q  71 ccaaagtggagggcaaccattttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaaattgtttatgtggtatggtgtgggtcgtact 170  Q
    |||||||||| |||||||| ||||||||||||||||||||||||||||| ||| |||||| |||||| |||||||| |||||| ||||||||||||||||    
T  3403318 ccaaagtggacggcaaccactttggaagaaaaagttgaaaccctaatttcttagaaagggaaagatgcaattgtttgtgtggtgtggtgtgggtcgtact 3403417  T
Q  171 ggcaccaaagaaagataaaggaaatgtatatatattatagtaatatgatgattttattcttat 233  Q
    | |||||||||||||||||||||||||||||||||||||||||||| ||| ||||| ||||||    
T  3403418 gacaccaaagaaagataaaggaaatgtatatatattatagtaatataatgtttttactcttat 3403480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 16 - 168
Target Start/End: Complemental strand, 28377327 - 28377174
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattatatccaaagtggagggcaaccattttggaagaaaaagttgaaacccta 115  Q
    ||||| ||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||| ||| ||||||||||||||||||||||||| ||||    
T  28377327 caaaaagaacattgttagtgctatactatatcgatccaaaaaagaagcactatatccaaagtggaaggcgaccattttggaagaaaaagttgaaatccta 28377228  T
Q  116 att-ttttaaaaaggggaagatgaaattgtttatgtggtatggtgtgggtcgta 168  Q
    ||| ||||| |||||||||||||||||||||||||||||||||||||| |||||    
T  28377227 atttttttagaaaggggaagatgaaattgtttatgtggtatggtgtggatcgta 28377174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 71 - 233
Target Start/End: Original strand, 8063841 - 8064003
Alignment:
Q  71 ccaaagtggagggcaaccattttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaaattgtttatgtggtatggtgtgggtcgtact 170  Q
    |||||||||| ||| |||| ||||||||||||||||||||||||||||| ||| |||||| |||||| ||||| || |||||| ||||||||||||||||    
T  8063841 ccaaagtggacggcgaccactttggaagaaaaagttgaaaccctaatttcttagaaagggaaagatgcaattggttgtgtggtgtggtgtgggtcgtact 8063940  T
Q  171 ggcaccaaagaaagataaaggaaatgtatatatattatagtaatatgatgattttattcttat 233  Q
    ||||||||||||||||||||||||| |||||||||||||||||||| ||| ||||||||||||    
T  8063941 ggcaccaaagaaagataaaggaaatatatatatattatagtaatataatgtttttattcttat 8064003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 86 - 233
Target Start/End: Complemental strand, 14795366 - 14795219
Alignment:
Q  86 accattttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaaattgtttatgtggtatggtgtgggtcgtactggcaccaaagaaaga 185  Q
    |||| ||||||||||||||||||||||||||||| |||| ||||| |||||| ||||| || |||||| |||||||||||||||| ||||||||||||||    
T  14795366 accactttggaagaaaaagttgaaaccctaatttcttaataagggaaagatgcaattggttgtgtggtgtggtgtgggtcgtactagcaccaaagaaaga 14795267  T
Q  186 taaaggaaatgtatatatattatagtaatatgatgattttattcttat 233  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||    
T  14795266 taaaggaaatgtatatatattatagtaatataatgtttttattcttat 14795219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 86 - 233
Target Start/End: Original strand, 5325472 - 5325619
Alignment:
Q  86 accattttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaaattgtttatgtggtatggtgtgggtcgtactggcaccaaagaaaga 185  Q
    |||| ||||||||||||||||||||||||||||| |||  ||||| |||||| ||||| || |||||| |||||||||||||||||| ||||||||||||    
T  5325472 accactttggaagaaaaagttgaaaccctaatttcttagtaagggaaagatgcaattggttgtgtggtgtggtgtgggtcgtactggtaccaaagaaaga 5325571  T
Q  186 taaaggaaatgtatatatattatagtaatatgatgattttattcttat 233  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||    
T  5325572 taaaggaaatgtatatatattatagtaatataatgtttttattcttat 5325619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 71 - 230
Target Start/End: Complemental strand, 41145987 - 41145828
Alignment:
Q  71 ccaaagtggagggcaaccattttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaaattgtttatgtggtatggtgtgggtcgtact 170  Q
    |||||||||| | |||||| ||||||||||||||||||||||||||||| ||| |||||| |||||| |||||||| |||||| ||||||||||||||||    
T  41145987 ccaaagtggacgacaaccactttggaagaaaaagttgaaaccctaatttcttagaaagggaaagatgcaattgtttgtgtggtgtggtgtgggtcgtact 41145888  T
Q  171 ggcaccaaagaaagataaaggaaatgtatatatattatagtaatatgatgattttattct 230  Q
    | ||| ||||||||| ||| |||||||||||||||||||||||||| ||| |||||||||    
T  41145887 gacactaaagaaagagaaaagaaatgtatatatattatagtaatataatgtttttattct 41145828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 71 - 233
Target Start/End: Complemental strand, 52572564 - 52572407
Alignment:
Q  71 ccaaagtggagggcaaccattttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaaattgtttatgtggtatggtgtgggtcgtact 170  Q
    |||||||||| ||| |||| ||||||||||||||||||||||||||||| ||| |||||| |||||| ||||||||     || ||||||||||||||||    
T  52572564 ccaaagtggacggcgaccactttggaagaaaaagttgaaaccctaatttcttagaaagggaaagatgcaattgttt-----gtgtggtgtgggtcgtact 52572470  T
Q  171 ggcaccaaagaaagataaaggaaatgtatatatattatagtaatatgatgattttattcttat 233  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||| ||  ||||||||||||    
T  52572469 ggcaccaaagaaagataaaagaaatatatatatattatagtaatataatatttttattcttat 52572407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 71 - 233
Target Start/End: Complemental strand, 53322714 - 53322552
Alignment:
Q  71 ccaaagtggagggcaaccattttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaaattgtttatgtggtatggtgtgggtcgtact 170  Q
    ||||| |||| ||| |||| ||||||||||||||||||||||||||||| ||| |||||| || ||| |||||||| ||||   |||||||| |||||||    
T  53322714 ccaaactggacggcgaccactttggaagaaaaagttgaaaccctaatttcttagaaagggaaaaatgcaattgtttgtgtgtcgtggtgtggttcgtact 53322615  T
Q  171 ggcaccaaagaaagataaaggaaatgtatatatattatagtaatatgatgattttattcttat 233  Q
     |||||||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||    
T  53322614 tgcaccaaagaaagataaatgaaatgtatatatattatagtaatataatgtttttattcttat 53322552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 71 - 226
Target Start/End: Complemental strand, 31226712 - 31226557
Alignment:
Q  71 ccaaagtggagggcaaccattttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaaattgtttatgtggtatggtgtgggtcgtact 170  Q
    |||||||||| ||| |||| |||| ||||||||||||||| |||||||| | | |||||| |||||| ||||| || |||||| || |||||| ||||||    
T  31226712 ccaaagtggacggcgaccactttgaaagaaaaagttgaaaacctaatttctcagaaagggaaagatgcaattggttgtgtggtgtgatgtgggccgtact 31226613  T
Q  171 ggcaccaaagaaagataaaggaaatgtatatatattatagtaatatgatgatttta 226  Q
    ||||||||||||||||||| ||||||||||||||||||||||| || ||| |||||    
T  31226612 ggcaccaaagaaagataaatgaaatgtatatatattatagtaacataatgttttta 31226557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 349 - 458
Target Start/End: Original strand, 8064119 - 8064228
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    ||||||||| |||||||||| ||||||||||||||||||||| |||| ||||||||||| |||||||||| ||||| |||||||||||| ||||||||||    
T  8064119 ttaatatttagatactctccggatacgtatcggaaagtatcgggcaggtatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatc 8064218  T
Q  449 ggggcttcat 458  Q
    ||||||||||    
T  8064219 ggggcttcat 8064228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 349 - 456
Target Start/End: Complemental strand, 19738805 - 19738698
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    |||||||||||||||||||| |||||||||||| |||||||| |||| ||||||||||| |||||||||| ||||| |||||||||||| ||||||||||    
T  19738805 ttaatatttggatactctccggatacgtatcgggaagtatcgggcaggtatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatc 19738706  T
Q  449 ggggcttc 456  Q
    ||||||||    
T  19738705 ggggcttc 19738698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 288 - 457
Target Start/End: Complemental strand, 5834996 - 5834830
Alignment:
Q  288 cacaagtatccgtgtgtatcaggacgtatcggaaaattattttcttcnnnnnnnnnnnntattaatatttggatactctcccgatacgtatcggaaagta 387  Q
    |||||||||||||| ||||| |||||||||||||||||||||||||               ||||||||||||||||||||||||||||||||| ||| |    
T  5834996 cacaagtatccgtgcgtatcgggacgtatcggaaaattattttcttaaaaaataaaat---ttaatatttggatactctcccgatacgtatcgggaagca 5834900  T
Q  388 tcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatcggggcttca 457  Q
    ||| |||| ||||||||||| |||||||||| ||||| |||||||||||| |||||||||||| ||||||    
T  5834899 tcgggcaggtatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggagcttca 5834830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 349 - 458
Target Start/End: Original strand, 5325731 - 5325840
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    |||||||||||||||||||| |||||||||||| |||||||| |||| ||||||||||| |||||||||| |||| ||||||||||||| || |||||||    
T  5325731 ttaatatttggatactctccagatacgtatcgggaagtatcgggcaggtatcggtgcaggatacgcaggggatacaatacgtcatccattttaaagtatc 5325830  T
Q  449 ggggcttcat 458  Q
    ||||||||||    
T  5325831 ggggcttcat 5325840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 349 - 457
Target Start/End: Original strand, 52122879 - 52122987
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    |||||||||||||||||||| |||||||||||| |||||||| |||| ||||||||||| |||||||||| ||||  |||||||||||| ||||||||||    
T  52122879 ttaatatttggatactctccggatacgtatcgggaagtatcgggcaggtatcggtgcaggatacgcaggggatacagtacgtcatccattttgaagtatc 52122978  T
Q  449 ggggcttca 457  Q
    |||||||||    
T  52122979 ggggcttca 52122987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 349 - 457
Target Start/End: Complemental strand, 28377104 - 28376996
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    |||||||||||||||||||||| ||||||||| ||||||||| | || ||||||||||| |||| ||||  |||||||||||||||||| ||||||||||    
T  28377104 ttaatatttggatactctcccggtacgtatcgaaaagtatcgggtaggtatcggtgcaggatacacaggagatacgatacgtcatccattttgaagtatc 28377005  T
Q  449 ggggcttca 457  Q
    |||||||||    
T  28377004 ggggcttca 28376996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 349 - 457
Target Start/End: Complemental strand, 53322445 - 53322337
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    |||||||||||||||||||| |||||||||||| ||||||||||| | |||| |||||| |||||||  | |||||||||||||||||| ||||||||||    
T  53322445 ttaatatttggatactctccggatacgtatcgggaagtatcgagccggtatcagtgcaggatacgcaaaggatacgatacgtcatccattttgaagtatc 53322346  T
Q  449 ggggcttca 457  Q
    |||||||||    
T  53322345 ggggcttca 53322337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 349 - 457
Target Start/End: Complemental strand, 41145720 - 41145612
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    ||||||||||||||||||||  ||||||||||||||||||||  ||| ||||| ||||| |||||||||| ||||  |||||||||||| ||||||||||    
T  41145720 ttaatatttggatactctccgaatacgtatcggaaagtatcggacaggtatcgatgcaggatacgcaggggatacagtacgtcatccattttgaagtatc 41145621  T
Q  449 ggggcttca 457  Q
    |||||||||    
T  41145620 ggggcttca 41145612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 359 - 458
Target Start/End: Complemental strand, 40694168 - 40694069
Alignment:
Q  359 gatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatcggggcttcat 458  Q
    |||||||||| |||||||||||| ||||||| | ||| ||||||||||||||||||| || ||||||||| |||||||| ||||||||||||||||||||    
T  40694168 gatactctcctgatacgtatcgggaagtatcaatcaggtatcggtgcagaatacgcatgggatacgatacatcatccattttgaagtatcggggcttcat 40694069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 148 - 230
Target Start/End: Original strand, 52122682 - 52122764
Alignment:
Q  148 tgtggtatggtgtgggtcgtactggcaccaaagaaagataaaggaaatgtatatatattatagtaatatgatgattttattct 230  Q
    |||||| |||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| ||| |||||||||    
T  52122682 tgtggtgtggtgtgggtcgtactagcaccaaaaaaagataaaggaaatgtatatatattatagtaatataatgtttttattct 52122764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 349 - 447
Target Start/End: Complemental strand, 52721372 - 52721274
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtat 447  Q
    ||||||||||||||||||||  ||||||||||| |||||||  |||||||||||||||| |||||||||| ||||||||||||||| || |||||||||    
T  52721372 ttaatatttggatactctccgaatacgtatcgggaagtatcaggcagatatcggtgcaggatacgcaggggatacgatacgtcatctattttgaagtat 52721274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 349 - 457
Target Start/End: Original strand, 42472579 - 42472687
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    |||||||||||||||||||| ||||||||| || |||||||| |||  ||||||||||| |||||||||| ||||  |||||||||||| ||||||||||    
T  42472579 ttaatatttggatactctccggatacgtattgggaagtatcgggcaagtatcggtgcaggatacgcagggaatacagtacgtcatccattttgaagtatc 42472678  T
Q  449 ggggcttca 457  Q
    ||| |||||    
T  42472679 gggacttca 42472687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 125 - 214
Target Start/End: Complemental strand, 19739019 - 19738930
Alignment:
Q  125 aaaggggaagatgaaattgtttatgtggtatggtgtgggtcgtactggcaccaaagaaagataaaggaaatgtatatatattatagtaat 214  Q
    |||||| || ||| ||||| || |||||| ||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  19739019 aaagggaaatatgcaattggttgtgtggtgtggtgtgggtcgtacgggcaccaaagaaagataaagaaaatgtatatatattatagtaat 19738930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 125 - 214
Target Start/End: Original strand, 42472375 - 42472464
Alignment:
Q  125 aaaggggaagatgaaattgtttatgtggtatggtgtgggtcgtactggcaccaaagaaagataaaggaaatgtatatatattatagtaat 214  Q
    |||||| |||||| ||||| || |||||| ||||||||||||||| ||||| |||||||||||||| |||||||||||||||||||||||    
T  42472375 aaagggaaagatgcaattggttgtgtggtgtggtgtgggtcgtacgggcactaaagaaagataaagaaaatgtatatatattatagtaat 42472464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 349 - 458
Target Start/End: Original strand, 36511944 - 36512053
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    ||||| || ||||||||| | ||||||||||||||||||||| |||  |||||| |||| ||||||| || |||| |||||||| |||| ||||||||||    
T  36511944 ttaatcttcggatactcttctgatacgtatcggaaagtatcgggcaagtatcggcgcaggatacgcacgggatacaatacgtcaaccattttgaagtatc 36512043  T
Q  449 ggggcttcat 458  Q
    ||||||||||    
T  36512044 ggggcttcat 36512053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 358 - 458
Target Start/End: Complemental strand, 1177080 - 1176980
Alignment:
Q  358 ggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatcggggcttca 457  Q
    ||||||||| | ||||| ||||||||||||||| |||| ||| ||||||| ||||| |||| ||||||||||||| | || |||||||||||||||||||    
T  1177080 ggatactcttctgatacatatcggaaagtatcgggcaggtatgggtgcaggatacgtaggggatacgatacgtcaactattttgaagtatcggggcttca 1176981  T
Q  458 t 458  Q
    |    
T  1176980 t 1176980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 349 - 458
Target Start/End: Complemental strand, 2586444 - 2586335
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    ||||| || ||||||||| | ||||||||| ||||||||||| |||| | |||||| || |||| ||||| ||||| |||||||||||| || |||||||    
T  2586444 ttaatcttcggatactcttctgatacgtattggaaagtatcgggcaggtgtcggtgaaggatactcaggggatacggtacgtcatccattttaaagtatc 2586345  T
Q  449 ggggcttcat 458  Q
    ||||||||||    
T  2586344 ggggcttcat 2586335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 17 - 109
Target Start/End: Original strand, 43509725 - 43509813
Alignment:
Q  17 aaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattatatccaaagtggagggcaaccattttggaagaaaaagttgaa 109  Q
    |||||||||||||||| ||||||||| ||||    ||||||||||||||||||||||||||||| ||| |||||| || |||||||| |||||    
T  43509725 aaaaggaacattgttaatgctatactatatc----caaaaaagaagcattatatccaaagtggaaggcgaccattctgaaagaaaaaattgaa 43509813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 349 - 457
Target Start/End: Original strand, 38492279 - 38492377
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    |||||||||||||||||||| ||||||||||||          |||| ||||||||||| |||||||||| ||||  |||||||||||| ||||||||||    
T  38492279 ttaatatttggatactctccggatacgtatcgg----------gcaggtatcggtgcaggatacgcaggggatacagtacgtcatccattttgaagtatc 38492368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 55900949 - 55901006
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattatatcca 73  Q
    ||||| |||||||||||||| |||||| ||||||||||||||||||||||||||||||    
T  55900949 caaaatgaacattgttagtgttatactatatcgatccaaaaaagaagcattatatcca 55901006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 397 - 457
Target Start/End: Complemental strand, 14795083 - 14795023
Alignment:
Q  397 tatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatcggggcttca 457  Q
    ||||||||||| |||||||||| ||||| |||||||||||| |||||||||||||||||||    
T  14795083 tatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttca 14795023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 358 - 446
Target Start/End: Original strand, 44521996 - 44522084
Alignment:
Q  358 ggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagta 446  Q
    ||||||||||| ||||||||||||||| |||| | ||||||||||||||||||| |||||  |||  |||| |||||||| ||||||||    
T  44521996 ggatactctcctgatacgtatcggaaaatatcaaacagatatcggtgcagaatatgcaggagatataatacatcatccattttgaagta 44522084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 16 - 75
Target Start/End: Original strand, 42630279 - 42630338
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattatatccaaa 75  Q
    |||||||||||||||||||| ||||||  |||||| ||||||||||||||||||||||||    
T  42630279 caaaaggaacattgttagtgttatactacatcgattcaaaaaagaagcattatatccaaa 42630338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 16 - 75
Target Start/End: Original strand, 44521847 - 44521906
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattatatccaaa 75  Q
    ||||||||||||||||| || |||||| ||||||||||||||||||||||||||| ||||    
T  44521847 caaaaggaacattgttaatgttatactatatcgatccaaaaaagaagcattatattcaaa 44521906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 383 - 457
Target Start/End: Complemental strand, 10257774 - 10257700
Alignment:
Q  383 aagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatcggggcttca 457  Q
    |||||||| |||| ||||| | |||||||||||| | ||||||||| |||||||| |||||||||||||||||||    
T  10257774 aagtatcgggcaggtatcgatacagaatacgcagcggatacgatacatcatccattttgaagtatcggggcttca 10257700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 349 - 451
Target Start/End: Original strand, 46431943 - 46432045
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    ||||| |||||||||||||  |||||||||||| |||||||   ||| ||||| ||||| ||| |||| | |||||||||||||||| | ||||||||||    
T  46431943 ttaatctttggatactctcttgatacgtatcgggaagtatcagtcaggtatcgttgcaggatatgcagaggatacgatacgtcatccgttttgaagtatc 46432042  T
Q  449 ggg 451  Q
    |||    
T  46432043 ggg 46432045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 363 - 457
Target Start/End: Complemental strand, 47607203 - 47607110
Alignment:
Q  363 ctctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatcggggcttca 457  Q
    |||||| |||||||||| | || ||||  |||||||||| ||||| |||||||||  |||||||| ||||||||| |||||||||||||||||||    
T  47607203 ctctcctgatacgtatcaggaaatatcaggcagatatcg-tgcaggatacgcaggagatacgatatgtcatccattttgaagtatcggggcttca 47607110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 1177272 - 1177219
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattata 69  Q
    |||||| |||||||||||||||||||| |||| |||||||||||||||||||||    
T  1177272 caaaagaaacattgttagtgctatactatatcaatccaaaaaagaagcattata 1177219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 360 - 448
Target Start/End: Complemental strand, 27981993 - 27981905
Alignment:
Q  360 atactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    ||||||||  ||||||||||| ||||||||   |||||||||||| || || ||||||  |||||||||||||||||| ||||||||||    
T  27981993 atactctcttgatacgtatcgaaaagtatcagacagatatcggtggaggatgcgcaggagatacgatacgtcatccattttgaagtatc 27981905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 16 - 75
Target Start/End: Complemental strand, 53323169 - 53323111
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattatatccaaa 75  Q
    |||||||||| |||||||||||||||| ||||||||||||||||||||| | ||||||||    
T  53323169 caaaaggaac-ttgttagtgctatactatatcgatccaaaaaagaagcactgtatccaaa 53323111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 17 - 71
Target Start/End: Complemental strand, 39958004 - 39957950
Alignment:
Q  17 aaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattatatc 71  Q
    |||| ||||||||||||||||||||| |||||||| |||||||||||| ||||||    
T  39958004 aaaaagaacattgttagtgctatactatatcgatctaaaaaagaagcactatatc 39957950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 358 - 455
Target Start/End: Complemental strand, 51858931 - 51858834
Alignment:
Q  358 ggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgca-gaatacgcagggtatacgatacgtcatccatcttgaagtatcggggctt 455  Q
    ||||||||||| |||||||||||| |||||||   ||| ||||| |||| | |||||||||  |||||||||||||||||| || ||||||||||||||    
T  51858931 ggatactctcctgatacgtatcgggaagtatcagacaggtatcg-tgcaaggatacgcaggagatacgatacgtcatccattttaaagtatcggggctt 51858834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 349 - 457
Target Start/End: Original strand, 3403595 - 3403693
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    |||||||||||||||||||| |||||||||||| |||          ||||| |||||| |||| ||||| ||||| |||||||||||| |||||||||     
T  3403595 ttaatatttggatactctccggatacgtatcgggaag----------atatcagtgcaggatacacaggggatacggtacgtcatccattttgaagtatt 3403684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 349 - 458
Target Start/End: Complemental strand, 17892356 - 17892247
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    ||||| || ||||||||| | ||||| |||||| |||||||| |||| |||||||| |  ||||||| |  ||||| |||||| ||||| ||||||||||    
T  17892356 ttaatcttcggatactcttctgatacatatcgggaagtatcgggcaggtatcggtgtatgatacgcatgagatacggtacgtcgtccattttgaagtatc 17892257  T
Q  449 ggggcttcat 458  Q
    || |||||||    
T  17892256 ggagcttcat 17892247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 40694365 - 40694312
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattata 69  Q
    |||||| |||||||||||| ||||||| ||||||| ||||||||||||||||||    
T  40694365 caaaagaaacattgttagtactatactatatcgattcaaaaaagaagcattata 40694312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 376 - 457
Target Start/End: Complemental strand, 51674939 - 51674858
Alignment:
Q  376 tatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatcggggcttca 457  Q
    |||||||||||||||  ||  |||| |||||||||| |||||  ||||||||||||||| || |||||||||||| ||||||    
T  51674939 tatcggaaagtatcggacaagtatcagtgcagaatatgcaggagatacgatacgtcatctattttgaagtatcggcgcttca 51674858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 16 - 65
Target Start/End: Complemental strand, 51859090 - 51859041
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcat 65  Q
    |||||| ||||||||||||| |||||| ||||||||||||||||||||||    
T  51859090 caaaagaaacattgttagtgttatactatatcgatccaaaaaagaagcat 51859041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 349 - 458
Target Start/End: Original strand, 55901149 - 55901258
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    ||||| || ||||| | ||| |||||||||||  |||||||| | |  ||||||||||| |||| ||||| ||||||||||||||| || || |||||||    
T  55901149 ttaatcttcggatattttcctgatacgtatcgagaagtatcgggtatgtatcggtgcaggatacacaggggatacgatacgtcatctattttaaagtatc 55901248  T
Q  449 ggggcttcat 458  Q
    |||| |||||    
T  55901249 ggggtttcat 55901258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 17 - 69
Target Start/End: Original strand, 31946051 - 31946102
Alignment:
Q  17 aaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattata 69  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||| ||||    
T  31946051 aaaaggaacattgttagtgctatac-atatcgatccaaaaaagaagcactata 31946102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 397 - 449
Target Start/End: Original strand, 31946263 - 31946315
Alignment:
Q  397 tatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatcg 449  Q
    ||||||||||| |||||||||| |||||||||||||||||| || ||||||||    
T  31946263 tatcggtgcaggatacgcagggaatacgatacgtcatccattttaaagtatcg 31946315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 349 - 457
Target Start/End: Original strand, 37992543 - 37992651
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    ||||| |||||||||||| | ||||||||||||||||||||   ||  ||||||||||  || |||| || |||| ||||||| ||||| |||||||| |    
T  37992543 ttaatctttggatactcttctgatacgtatcggaaagtatcagacatgtatcggtgcaagatccgcaagggatacaatacgtcttccattttgaagtacc 37992642  T
Q  449 ggggcttca 457  Q
    || ||||||    
T  37992643 ggagcttca 37992651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 15 - 71
Target Start/End: Complemental strand, 52721672 - 52721616
Alignment:
Q  15 tcaaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattatatc 71  Q
    |||||| |||||||||||||| |||||| |||||||| |||||||||||| ||||||    
T  52721672 tcaaaaagaacattgttagtgttatactatatcgatctaaaaaagaagcactatatc 52721616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 75
Target Start/End: Original strand, 3109106 - 3109165
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattatatccaaa 75  Q
    |||||||||||||||||||| |||||| |||||||| ||||||||| || ||||| ||||    
T  3109106 caaaaggaacattgttagtgttatactatatcgatctaaaaaagaaacactatattcaaa 3109165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 75
Target Start/End: Original strand, 3402862 - 3402920
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattatatccaaa 75  Q
    |||||||||| ||||||||| |||||| |||||||||||||||||| || ||||||||||    
T  3402862 caaaaggaac-ttgttagtgatatactatatcgatccaaaaaagaatcactatatccaaa 3402920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 75
Target Start/End: Complemental strand, 14795837 - 14795779
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattatatccaaa 75  Q
    |||||||||| |||||||||||||||| ||||||||| |||||||| || ||||||||||    
T  14795837 caaaaggaac-ttgttagtgctatactatatcgatccgaaaaagaatcactatatccaaa 14795779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 75
Target Start/End: Original strand, 38492050 - 38492108
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattatatccaaa 75  Q
    |||||||||| |||||||||||||||| |||||||||||||||||| |  ||||||||||    
T  38492050 caaaaggaac-ttgttagtgctatactatatcgatccaaaaaagaatccctatatccaaa 38492108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 75
Target Start/End: Complemental strand, 41146434 - 41146376
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattatatccaaa 75  Q
    |||||||||| ||||||||| |||||| ||||||| ||||||||||||| ||||||||||    
T  41146434 caaaaggaac-ttgttagtgttatactatatcgattcaaaaaagaagcactatatccaaa 41146376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 383 - 458
Target Start/End: Original strand, 44121886 - 44121961
Alignment:
Q  383 aagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatcggggcttcat 458  Q
    |||||||| |||| ||||||||||| ||||||||   |||||||||||| ||||| |||||||||  |||||||||    
T  44121886 aagtatcgggcaggtatcggtgcaggatacgcagaagatacgatacgtcgtccattttgaagtatgtgggcttcat 44121961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 70
Target Start/End: Original strand, 24793532 - 24793586
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattatat 70  Q
    |||||||||||||||||||| |||||| |||||||| ||||||||| || |||||    
T  24793532 caaaaggaacattgttagtgttatactatatcgatctaaaaaagaaacactatat 24793586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 16 - 61
Target Start/End: Complemental strand, 31227170 - 31227126
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaa 61  Q
    |||||||||| |||||||||||||||| ||||||||||||||||||    
T  31227170 caaaaggaac-ttgttagtgctatactatatcgatccaaaaaagaa 31227126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 16 - 69
Target Start/End: Original strand, 36511756 - 36511809
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattata 69  Q
    |||||| |||||| ||||||||||| | ||||||||||||||||||||| ||||    
T  36511756 caaaagaaacattcttagtgctatattatatcgatccaaaaaagaagcactata 36511809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 47607396 - 47607343
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattata 69  Q
    |||||| ||||||||| |||||||| | ||||||||||||||| ||||||||||    
T  47607396 caaaagaaacattgttggtgctatattatatcgatccaaaaaaaaagcattata 47607343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 21 - 65
Target Start/End: Original strand, 258898 - 258942
Alignment:
Q  21 ggaacattgttagtgctatactgtatcgatccaaaaaagaagcat 65  Q
    |||||||||||| ||||||||| ||| ||||||||||||||||||    
T  258898 ggaacattgttactgctatactatattgatccaaaaaagaagcat 258942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 458
Target Start/End: Original strand, 3109336 - 3109424
Alignment:
Q  370 gatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatcggggcttcat 458  Q
    ||||||||||| ||| |||||| ||| ||||||| |||||||||||  | ||||| || || |||||| || |||||||| ||||||||    
T  3109336 gatacgtatcgaaaaatatcgaacaggtatcggtacagaatacgcaaagaatacggtatgtgatccattttaaagtatcgaggcttcat 3109424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 27 - 75
Target Start/End: Original strand, 8063395 - 8063443
Alignment:
Q  27 ttgttagtgctatactgtatcgatccaaaaaagaagcattatatccaaa 75  Q
    ||||||||| |||||| |||||||||||||||||| || ||||||||||    
T  8063395 ttgttagtgatatactatatcgatccaaaaaagaatcactatatccaaa 8063443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 15 - 75
Target Start/End: Complemental strand, 17892566 - 17892506
Alignment:
Q  15 tcaaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattatatccaaa 75  Q
    ||||||||||||||||||||| |||||| |||| ||| ||||||||| || ||||| ||||    
T  17892566 tcaaaaggaacattgttagtgttatactatatcaatctaaaaaagaaacactatattcaaa 17892506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 71
Target Start/End: Complemental strand, 24784689 - 24784634
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattatatc 71  Q
    ||||| |||||||| |||||||||||| |||| ||| |||||||||||| ||||||    
T  24784689 caaaaagaacattgatagtgctatactatatcaatctaaaaaagaagcactatatc 24784634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 71
Target Start/End: Original strand, 24823577 - 24823632
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattatatc 71  Q
    ||||| |||||||| |||||||||||| |||| ||| |||||||||||| ||||||    
T  24823577 caaaaagaacattgatagtgctatactatatcaatctaaaaaagaagcactatatc 24823632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 75
Target Start/End: Complemental strand, 36943986 - 36943927
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattatatccaaa 75  Q
    |||||||||||||||||||  |||||| |||||||| ||||||||| || ||||| ||||    
T  36943986 caaaaggaacattgttagtattatactatatcgatctaaaaaagaaacactatattcaaa 36943927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 69
Target Start/End: Complemental strand, 51675082 - 51675031
Alignment:
Q  18 aaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattata 69  Q
    ||||||| |||||||||| |||||| |||| |||||||||||||||| ||||    
T  51675082 aaaggaatattgttagtgatatactatatctatccaaaaaagaagcactata 51675031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 288 - 330
Target Start/End: Complemental strand, 14795168 - 14795126
Alignment:
Q  288 cacaagtatccgtgtgtatcaggacgtatcggaaaattatttt 330  Q
    |||||||||||||||||||| ||| |||||||| |||||||||    
T  14795168 cacaagtatccgtgtgtatcgggatgtatcggataattatttt 14795126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 349 - 447
Target Start/End: Complemental strand, 21058941 - 21058843
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtat 447  Q
    ||||| |||||||||||||| |||||||||||| || ||||   ||  ||||||||||| |||| ||| | ||||| |||||||| ||| || ||||||    
T  21058941 ttaatctttggatactctccagatacgtatcgggaaatatcagacatgtatcggtgcaggatacacagtggatacgctacgtcattcattttaaagtat 21058843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 61
Target Start/End: Complemental strand, 2586633 - 2586588
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaa 61  Q
    ||||||||||||||||| || |||||| |||||||| |||||||||    
T  2586633 caaaaggaacattgttaatgttatactatatcgatctaaaaaagaa 2586588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 14614799 - 14614746
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattata 69  Q
    |||||| || ||||||||||||||| | ||| |||| |||||||||||||||||    
T  14614799 caaaagaaatattgttagtgctatattatattgatctaaaaaagaagcattata 14614746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 52573015 - 52572975
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaa 57  Q
    |||||||||| |||||||||||||||| ||||||||||||||    
T  52573015 caaaaggaac-ttgttagtgctatactatatcgatccaaaaa 52572975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 349 - 381
Target Start/End: Complemental strand, 14795110 - 14795078
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcgg 381  Q
    |||||||||||||||||||| ||||||||||||    
T  14795110 ttaatatttggatactctccggatacgtatcgg 14795078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 104; Significance: 1e-51; HSPs: 6)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 86 - 233
Target Start/End: Original strand, 44365 - 44512
Alignment:
Q  86 accattttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaaattgtttatgtggtatggtgtgggtcgtactggcaccaaagaaaga 185  Q
    |||| ||||||||||||||||||||||||||||| |||| ||||| |||||| ||||| || |||||| |||||||||||||||| ||||||||||||||    
T  44365 accactttggaagaaaaagttgaaaccctaatttcttaataagggaaagatgcaattggttgtgtggtgtggtgtgggtcgtactagcaccaaagaaaga 44464  T
Q  186 taaaggaaatgtatatatattatagtaatatgatgattttattcttat 233  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||    
T  44465 taaaggaaatgtatatatattatagtaatataatgtttttattcttat 44512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 397 - 457
Target Start/End: Original strand, 44648 - 44708
Alignment:
Q  397 tatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatcggggcttca 457  Q
    ||||||||||| |||||||||| ||||| |||||||||||| |||||||||||||||||||    
T  44648 tatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttca 44708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 75
Target Start/End: Original strand, 43894 - 43952
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattatatccaaa 75  Q
    |||||||||| |||||||||||||||| ||||||||| |||||||| || ||||||||||    
T  43894 caaaaggaac-ttgttagtgctatactatatcgatccgaaaaagaatcactatatccaaa 43952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 288 - 330
Target Start/End: Original strand, 44563 - 44605
Alignment:
Q  288 cacaagtatccgtgtgtatcaggacgtatcggaaaattatttt 330  Q
    |||||||||||||||||||| ||| |||||||| |||||||||    
T  44563 cacaagtatccgtgtgtatcgggatgtatcggataattatttt 44605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 69
Target Start/End: Original strand, 202577 - 202630
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattata 69  Q
    |||||| || ||||||||||||||| | ||| |||| |||||||||||||||||    
T  202577 caaaagaaatattgttagtgctatattatattgatctaaaaaagaagcattata 202630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #6
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 349 - 381
Target Start/End: Original strand, 44621 - 44653
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcgg 381  Q
    |||||||||||||||||||| ||||||||||||    
T  44621 ttaatatttggatactctccggatacgtatcgg 44653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 99; Significance: 1e-48; HSPs: 2)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 71 - 233
Target Start/End: Original strand, 30181 - 30343
Alignment:
Q  71 ccaaagtggagggcaaccattttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaaattgtttatgtggtatggtgtgggtcgtact 170  Q
    |||||||||| ||| |||| |||| |||||||||||||||||||||||| ||| |||||| |||||| ||||| || |||||| ||||||||||| ||||    
T  30181 ccaaagtggacggcgaccactttgaaagaaaaagttgaaaccctaatttcttagaaagggaaagatgcaattggttgtgtggtgtggtgtgggtcatact 30280  T
Q  171 ggcaccaaagaaagataaaggaaatgtatatatattatagtaatatgatgattttattcttat 233  Q
    ||||||||||||||||||| |||||||||||||||||||||||||| ||  ||||||||||||    
T  30281 ggcaccaaagaaagataaaagaaatgtatatatattatagtaatataatatttttattcttat 30343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 349 - 457
Target Start/End: Original strand, 30454 - 30562
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    |||||||||||||||||||| |||||||||| | |||||||| |||| |||||||| || |||||||||  ||||| ||||| |||||| ||||||||||    
T  30454 ttaatatttggatactctccggatacgtatcaggaagtatcgggcaggtatcggtgtaggatacgcaggaaatacggtacgttatccattttgaagtatc 30553  T
Q  449 ggggcttca 457  Q
    |||||||||    
T  30554 ggggcttca 30562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 96; Significance: 7e-47; HSPs: 3)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 71 - 233
Target Start/End: Original strand, 27523 - 27690
Alignment:
Q  71 ccaaagtggagggcaaccattttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaaattgttt-----atgtggtatggtgtgggtc 165  Q
    |||||||||| ||| |||| |||||||||||||||||||||| |||||| ||| |||||| |||||| ||||||||      |||||| |||||||||||    
T  27523 ccaaagtggacggcgaccactttggaagaaaaagttgaaaccttaatttcttagaaagggaaagatgcaattgtttgtatggtgtggtgtggtgtgggtc 27622  T
Q  166 gtactggcaccaaagaaagataaaggaaatgtatatatattatagtaatatgatgattttattcttat 233  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||    
T  27623 gtactggcaccaaagaaagataaatgaaatgtatatatattatagtaatataatgtttttattcttat 27690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 349 - 457
Target Start/End: Original strand, 27801 - 27899
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    |||||||||||||||||| | |||||||||||||          ||| ||||||||||| ||| |||||| ||||| |||||||||||| ||||||||||    
T  27801 ttaatatttggatactctgcggatacgtatcgga----------caggtatcggtgcaggatatgcaggggatacggtacgtcatccattttgaagtatc 27890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 75
Target Start/End: Original strand, 27092 - 27133
Alignment:
Q  34 tgctatactgtatcgatccaaaaaagaagcattatatccaaa 75  Q
    ||||||||| |||||||||||||||||||||  |||||||||    
T  27092 tgctatactatatcgatccaaaaaagaagcaccatatccaaa 27133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 82; Significance: 2e-38; HSPs: 3)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 72 - 233
Target Start/End: Original strand, 41822 - 41983
Alignment:
Q  72 caaagtggagggcaaccattttggaagaaaaagttgaaaccctaattttttaaaaaggggaagatgaaattgtttatgtggtatggtgtgggtcgtactg 171  Q
    ||||||||| | | |||| ||||||||||||||||||||||||||||| ||| |||| | |||||| |||||||| |||||| |||| ||||||||||||    
T  41822 caaagtggacgacgaccactttggaagaaaaagttgaaaccctaatttcttagaaagcgaaagatgcaattgtttgtgtggtgtggtatgggtcgtactg 41921  T
Q  172 gcaccaaagaaagataaaggaaatgtatatatattatagtaatatgatgattttattcttat 233  Q
     ||||||||||||||||| |||||||||||||||| |||| |||| ||  | ||||||||||    
T  41922 acaccaaagaaagataaatgaaatgtatatatattttagtgatataatcttattattcttat 41983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 397 - 458
Target Start/End: Original strand, 42123 - 42184
Alignment:
Q  397 tatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatcggggcttcat 458  Q
    ||||||||||| |||||||||| ||||  |||||||||||| ||||||||||||||||||||    
T  42123 tatcggtgcaggatacgcaggggatacagtacgtcatccattttgaagtatcggggcttcat 42184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 16 - 75
Target Start/End: Original strand, 41373 - 41431
Alignment:
Q  16 caaaaggaacattgttagtgctatactgtatcgatccaaaaaagaagcattatatccaaa 75  Q
    |||||||||| ||||||||| |||||| ||||||||||||||||||||| ||||||||||    
T  41373 caaaaggaac-ttgttagtgttatactatatcgatccaaaaaagaagcactatatccaaa 41431  T

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Target: scaffold0640 (Bit Score: 73; Significance: 4e-33; HSPs: 2)
Name: scaffold0640
Description:

Target: scaffold0640; HSP #1
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 349 - 457
Target Start/End: Original strand, 8102 - 8210
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    |||||||||||||||||||| |||||||||||| |||||||| |||| ||||||||||| |||||||||| ||||| ||| |||||||| ||||||||||    
T  8102 ttaatatttggatactctccggatacgtatcgggaagtatcgggcaggtatcggtgcaggatacgcaggggatacggtacatcatccattttgaagtatc 8201  T
Q  449 ggggcttca 457  Q
    |||||||||    
T  8202 ggggcttca 8210  T

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Target: scaffold0640; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 148 - 230
Target Start/End: Original strand, 7900 - 7982
Alignment:
Q  148 tgtggtatggtgtgggtcgtactggcaccaaagaaagataaaggaaatgtatatatattatagtaatatgatgattttattct 230  Q
    |||||| |||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| ||| |||||||||    
T  7900 tgtggtgtggtgtgggtcgtactagcaccaaaaaaagataaaggaaatgtatatatattatagtaatataatgtttttattct 7982  T

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Target: scaffold0177 (Bit Score: 51; Significance: 5e-20; HSPs: 2)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 148 - 233
Target Start/End: Original strand, 25363 - 25446
Alignment:
Q  148 tgtggtatggtgtgggtcgtactggcaccaaagaaagataaaggaaatgtatatatattatagtaatatgatgattttattcttat 233  Q
    |||||| |||||||||||||||| |||| ||| ||||||||||||||  |||||||||||||||||||| ||| ||||||||||||    
T  25363 tgtggtgtggtgtgggtcgtactagcacaaaaaaaagataaaggaaa--tatatatattatagtaatataatgtttttattcttat 25446  T

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Target: scaffold0177; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 349 - 457
Target Start/End: Original strand, 25551 - 25648
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatc 448  Q
    |||||||||||||||||||| |||||||||||| |||||||           |||||||||||||||||| ||||| | |||||||||| ||||||||||    
T  25551 ttaatatttggatactctccggatacgtatcgggaagtatc-----------ggtgcagaatacgcaggggatacggtgcgtcatccattttgaagtatc 25639  T

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Target: scaffold0285 (Bit Score: 49; Significance: 8e-19; HSPs: 1)
Name: scaffold0285
Description:

Target: scaffold0285; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 359 - 455
Target Start/End: Complemental strand, 13348 - 13252
Alignment:
Q  359 gatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatcggggctt 455  Q
    |||||||||  |||||||||||| |||||||   ||| ||||||||||| |||||||||  |||||||||||||||||| |||||||||||| ||||    
T  13348 gatactctcttgatacgtatcgggaagtatctgacaggtatcggtgcaggatacgcaggagatacgatacgtcatccattttgaagtatcggagctt 13252  T

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Target: scaffold0240 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 359 - 457
Target Start/End: Complemental strand, 10698 - 10600
Alignment:
Q  359 gatactctcccgatacgtatcggaaagtatcgagcagatatcggtgcagaatacgcagggtatacgatacgtcatccatcttgaagtatcggggcttca 457  Q
    |||||||||| |||||||||||  |||||||| |||  ||||||||||  |||||||||| ||| | ||| |||||||| || ||||||| ||||||||    
T  10698 gatactctcctgatacgtatcgagaagtatcgggcaagtatcggtgcatgatacgcaggggatatggtacatcatccattttaaagtatctgggcttca 10600  T

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Target: scaffold0406 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0406
Description:

Target: scaffold0406; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 349 - 381
Target Start/End: Complemental strand, 13964 - 13932
Alignment:
Q  349 ttaatatttggatactctcccgatacgtatcgg 381  Q
    |||||||||||||||||||| ||||||||||||    
T  13964 ttaatatttggatactctccggatacgtatcgg 13932  T

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