View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8403_low_32 (Length: 297)
Name: NF8403_low_32
Description: NF8403
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8403_low_32 |
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Alignment Details
Target: chr6 (Bit Score: 271; Significance: 1e-151; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 1 - 275
Target Start/End: Complemental strand, 1877237 - 1876963
Alignment:
| Q |
1 |
cgttcccactaacagaaaaatatgataccaaatgaaactagcaatccaccttcgagctaccaacaaaataaaccatcctccacctctctataacctgggc |
100 |
Q |
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| T |
1877237 |
cgttcccactaacagaaaaatatgataccaaatgaaactagcaatccaccttcgagctaccaacaaaataaaccatcctccacctctctataacctgggc |
1877138 |
T |
|
| Q |
101 |
atgcaccaaacacaatcaaatcaacatccgagctaccactcaaaatacctcttttcgctagattgtcgtgggtaggtaacctcttgagaataagttgtca |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
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| T |
1877137 |
atgcaccaaacacaatcaaatcaacatccgagctaccactcaaaatacctcttttcgctagattgtcgtggataggtaacctcttgagaataagttgtca |
1877038 |
T |
|
| Q |
201 |
accaaaagtttgaacctttgacggcgctaaactatctcaatttgctttcaaatccctacatatagatgcattcaa |
275 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1877037 |
accaaaagtttgaacctttgacggcgctaaactatctcaatttgctttcaaatccctacatatagatgcattcaa |
1876963 |
T |
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