View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8403_low_36 (Length: 255)

Name: NF8403_low_36
Description: NF8403
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8403_low_36
NF8403_low_36
[»] chr5 (8 HSPs)
chr5 (7-237)||(804068-804303)
chr5 (175-237)||(805209-805271)
chr5 (7-83)||(8006967-8007043)
chr5 (7-83)||(8488244-8488321)
chr5 (7-83)||(25942438-25942515)
chr5 (17-83)||(34177908-34177974)
chr5 (9-83)||(42289302-42289376)
chr5 (11-86)||(7465410-7465483)
[»] chr3 (11 HSPs)
chr3 (7-83)||(3694557-3694633)
chr3 (7-83)||(23050309-23050384)
chr3 (29-86)||(18690520-18690577)
chr3 (7-83)||(33575085-33575162)
chr3 (25-83)||(52733938-52733994)
chr3 (25-83)||(8074474-8074532)
chr3 (25-83)||(31050871-31050929)
chr3 (56-86)||(37537053-37537083)
chr3 (56-85)||(630101-630130)
chr3 (29-86)||(18651095-18651152)
chr3 (26-86)||(44109470-44109528)
[»] chr6 (6 HSPs)
chr6 (7-80)||(2189507-2189580)
chr6 (7-83)||(15117084-15117158)
chr6 (8-86)||(6216302-6216380)
chr6 (52-86)||(14215861-14215895)
chr6 (7-76)||(1767250-1767319)
chr6 (43-79)||(14001955-14001990)
[»] chr7 (11 HSPs)
chr7 (7-86)||(43026154-43026233)
chr7 (25-86)||(3535947-3536006)
chr7 (22-83)||(36156036-36156097)
chr7 (9-86)||(35516888-35516965)
chr7 (27-83)||(1279304-1279360)
chr7 (27-86)||(13636674-13636733)
chr7 (27-86)||(13697863-13697922)
chr7 (7-86)||(24904911-24904990)
chr7 (25-86)||(47096420-47096479)
chr7 (7-83)||(9628387-9628464)
chr7 (7-83)||(10061773-10061850)
[»] chr4 (16 HSPs)
chr4 (18-86)||(22294756-22294824)
chr4 (29-86)||(5761188-5761245)
chr4 (22-86)||(46669652-46669716)
chr4 (10-78)||(8815548-8815616)
chr4 (7-79)||(22495194-22495266)
chr4 (4-83)||(30739352-30739429)
chr4 (26-86)||(32293463-32293523)
chr4 (7-83)||(42527184-42527259)
chr4 (10-86)||(45637625-45637700)
chr4 (7-81)||(18922105-18922177)
chr4 (52-86)||(21204742-21204776)
chr4 (52-86)||(30972230-30972264)
chr4 (29-86)||(5727325-5727382)
chr4 (7-83)||(13608782-13608859)
chr4 (38-83)||(19477514-19477559)
chr4 (52-88)||(41995841-41995877)
[»] scaffold0777 (1 HSPs)
scaffold0777 (7-86)||(1075-1154)
[»] chr8 (5 HSPs)
chr8 (9-83)||(43776414-43776488)
chr8 (37-86)||(13002653-13002702)
chr8 (18-83)||(33283007-33283072)
chr8 (29-86)||(21524030-21524087)
chr8 (17-86)||(4784878-4784947)
[»] chr2 (5 HSPs)
chr2 (17-86)||(36179075-36179144)
chr2 (37-86)||(38409214-38409262)
chr2 (7-83)||(40426759-40426833)
chr2 (4-83)||(34740534-34740614)
chr2 (40-80)||(45130944-45130984)
[»] chr1 (8 HSPs)
chr1 (10-83)||(52251539-52251612)
chr1 (7-86)||(17128684-17128764)
chr1 (7-83)||(8527213-8527290)
chr1 (37-86)||(23452645-23452694)
chr1 (7-83)||(42476509-42476586)
chr1 (10-86)||(2653552-2653627)
chr1 (52-83)||(16908882-16908913)
chr1 (28-83)||(25530245-25530300)
[»] scaffold0009 (1 HSPs)
scaffold0009 (55-86)||(183841-183872)


Alignment Details
Target: chr5 (Bit Score: 196; Significance: 1e-107; HSPs: 8)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 7 - 237
Target Start/End: Complemental strand, 804303 - 804068
Alignment:
Q  7 tttggtgttacttctttagcacaccttgtattaggaaggcctttatgatgtggtaatatatttcattttagcctcttaaataa-----ctcacacttaaa 101  Q
    |||||||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||| ||||||||| ||     ||||||||||||    
T  804303 tttggtgttacttccttagcacaccttgtattaggagggcctttttgatgtggtaatatatttcattttaacctcttaaaaaaaacaactcacacttaaa 804204  T
Q  102 tataattgtcaagtttagagaaaatagtctaggacatatacgtgaatatgattgagataaacaaaatttgatcaaaaactattgcagctggggagtaatt 201  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  804203 tataattgtcaagtttagagaaaatagtctaggacatatacgtgaatatgattgagataaacaaaatttgatcaaaaactattgcagctggggagtaatt 804104  T
Q  202 ttgacactaccaattaattggatattaactaaacct 237  Q
    ||||||||||||||||||||||||||||||||||||    
T  804103 ttgacactaccaattaattggatattaactaaacct 804068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 175 - 237
Target Start/End: Complemental strand, 805271 - 805209
Alignment:
Q  175 aaaaactattgcagctggggagtaattttgacactaccaattaattggatattaactaaacct 237  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  805271 aaaaactattgcagctggggagtaattttgacactaccaattaattgaatattaactaaacct 805209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 7 - 83
Target Start/End: Original strand, 8006967 - 8007043
Alignment:
Q  7 tttggtgttacttctttagcacaccttgtattaggaaggcctttatgatgtggtaatatatttcattttagcctctt 83  Q
    ||||||||| |||| |||||||||||||| ||| |||| ||||| |||| ||||||||||||| |||||||||||||    
T  8006967 tttggtgtttcttccttagcacaccttgtgttacgaagacctttttgatatggtaatatattttattttagcctctt 8007043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 7 - 83
Target Start/End: Original strand, 8488244 - 8488321
Alignment:
Q  7 tttggtgttacttctttagcacaccttgtattaggaaggcc-tttatgatgtggtaatatatttcattttagcctctt 83  Q
    ||||||||| ||||||||||||| |||||  |||||||||| ||| || |||||||||||||| ||||||||||||||    
T  8488244 tttggtgtttcttctttagcacaacttgtgctaggaaggccatttttgttgtggtaatatattgcattttagcctctt 8488321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 83
Target Start/End: Complemental strand, 25942515 - 25942438
Alignment:
Q  7 tttggtgttacttctttagcacaccttgtattaggaaggcctttatgatgtggtaatat-atttcattttagcctctt 83  Q
    ||||||||||||||||||||||| |||||  |||||||||| || | | |||||||||| | ||||||||||||||||    
T  25942515 tttggtgttacttctttagcacaacttgtgctaggaaggccattttaaggtggtaatataagttcattttagcctctt 25942438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 34177908 - 34177974
Alignment:
Q  17 cttctttagcacaccttgtattaggaaggcctttatgatgtggtaatatatttcattttagcctctt 83  Q
    |||| ||||||||||||||  |||||||||||||  | |||||||||||| |||||||||| |||||    
T  34177908 cttccttagcacaccttgtgctaggaaggccttttcgttgtggtaatatacttcattttagtctctt 34177974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 9 - 83
Target Start/End: Original strand, 42289302 - 42289376
Alignment:
Q  9 tggtgttacttctttagcacaccttgtattaggaaggcctttatgatgtggtaatatatttcattttagcctctt 83  Q
    ||||||| |||| ||||||||||||||  ||||||| ||||| || || |||||||||||| |||||| ||||||    
T  42289302 tggtgtttcttccttagcacaccttgtgctaggaagacctttttgttggggtaatatattttattttaacctctt 42289376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 86
Target Start/End: Original strand, 7465410 - 7465483
Alignment:
Q  11 gtgttacttctttagcacaccttgtattaggaaggcctttatgatgtggtaatatatttcattttagcctcttaaa 86  Q
    ||||| |||| ||||||||||| ||  ||||||||||   ||| |||| |||||||||||||||||||||||||||    
T  7465410 gtgtttcttccttagcacacctagtgctaggaaggcca--atgttgtgttaatatatttcattttagcctcttaaa 7465483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 49; Significance: 4e-19; HSPs: 11)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 7 - 83
Target Start/End: Complemental strand, 3694633 - 3694557
Alignment:
Q  7 tttggtgttacttctttagcacaccttgtattaggaaggcctttatgatgtggtaatatatttcattttagcctctt 83  Q
    ||||||||| |||| ||||||||||||||  ||||||| ||||  ||||||||||||||||||||||||||||||||    
T  3694633 tttggtgtttcttccttagcacaccttgtgctaggaagaccttattgatgtggtaatatatttcattttagcctctt 3694557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 7 - 83
Target Start/End: Original strand, 23050309 - 23050384
Alignment:
Q  7 tttggtgttacttctttagcacaccttgtattaggaaggcctttatgatgtggtaatatatttcattttagcctctt 83  Q
    ||||||||| |||  |||||||||||| | |||||||||||||| |||||||||||||||||| |||||||||||||    
T  23050309 tttggtgtttcttagttagcacaccttatgttaggaaggcctttttgatgtggtaatatattt-attttagcctctt 23050384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 86
Target Start/End: Original strand, 18690520 - 18690577
Alignment:
Q  29 accttgtattaggaaggcctttatgatgtggtaatatatttcattttagcctcttaaa 86  Q
    |||||||||||||||||||| | |||| | |||||||||| |||||||||||||||||    
T  18690520 accttgtattaggaaggcctctttgatttagtaatatattccattttagcctcttaaa 18690577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 83
Target Start/End: Complemental strand, 33575162 - 33575085
Alignment:
Q  7 tttggtgttacttctttagcacaccttgtattaggaaggcc-tttatgatgtggtaatatatttcattttagcctctt 83  Q
    |||||||||  |||||||||||| |||||| || ||||||| ||| || |||||||||||||| ||||||| ||||||    
T  33575162 tttggtgttttttctttagcacaacttgtactaagaaggccatttttgttgtggtaatatattgcattttaacctctt 33575085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 25 - 83
Target Start/End: Complemental strand, 52733994 - 52733938
Alignment:
Q  25 gcacaccttgtattaggaaggcctttatgatgtggtaatatatttcattttagcctctt 83  Q
    |||||||||||  ||||||| |||||||  |||||||||||||||||||||||| ||||    
T  52733994 gcacaccttgtgctaggaagacctttat--tgtggtaatatatttcattttagcttctt 52733938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 83
Target Start/End: Complemental strand, 8074532 - 8074474
Alignment:
Q  25 gcacaccttgtattaggaaggcctttatgatgtggtaatatatttcattttagcctctt 83  Q
    ||||||||||| || |||| | |||| ||||||||||||||| ||||||| ||||||||    
T  8074532 gcacaccttgtgttgggaaagactttttgatgtggtaatataattcatttgagcctctt 8074474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 83
Target Start/End: Original strand, 31050871 - 31050929
Alignment:
Q  25 gcacaccttgtattaggaaggcctttatgatgtggtaatatatttcattttagcctctt 83  Q
    |||||||||||  |||||||| | || |||  |||||||||||||||||||||||||||    
T  31050871 gcacaccttgtgctaggaaggacattttgagttggtaatatatttcattttagcctctt 31050929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 86
Target Start/End: Complemental strand, 37537083 - 37537053
Alignment:
Q  56 gtggtaatatatttcattttagcctcttaaa 86  Q
    |||||||||||||||||||||||||||||||    
T  37537083 gtggtaatatatttcattttagcctcttaaa 37537053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 56 - 85
Target Start/End: Original strand, 630101 - 630130
Alignment:
Q  56 gtggtaatatatttcattttagcctcttaa 85  Q
    ||||||||||||||||||||||||||||||    
T  630101 gtggtaatatatttcattttagcctcttaa 630130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 29 - 86
Target Start/End: Original strand, 18651095 - 18651152
Alignment:
Q  29 accttgtattaggaaggcctttatgatgtggtaatatatttcattttagcctcttaaa 86  Q
    |||||||||||| ||||||| | |||| | |||||||||| ||||||| |||||||||    
T  18651095 accttgtattagaaaggcctctttgatttagtaatatattccattttaacctcttaaa 18651152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 26 - 86
Target Start/End: Original strand, 44109470 - 44109528
Alignment:
Q  26 cacaccttgtattaggaaggcctttatgatgtggtaatatatttcattttagcctcttaaa 86  Q
    ||||||||||  |||||||| |||| |  |||| |||||||||||||||||||||||||||    
T  44109470 cacaccttgtgctaggaaggtctttgt--tgtgttaatatatttcattttagcctcttaaa 44109528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 46; Significance: 2e-17; HSPs: 6)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 7 - 80
Target Start/End: Complemental strand, 2189580 - 2189507
Alignment:
Q  7 tttggtgttacttctttagcacaccttgtattaggaaggcctttatgatgtggtaatatatttcattttagcct 80  Q
    ||||||||| |||| ||||||||||||||  ||||||| ||||  |||||||||||||||||||||||||||||    
T  2189580 tttggtgtttcttccttagcacaccttgtgctaggaagaccttgttgatgtggtaatatatttcattttagcct 2189507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 83
Target Start/End: Complemental strand, 15117158 - 15117084
Alignment:
Q  7 tttggtgttacttctttagcacaccttgtattaggaaggcctttatgatgtggtaatatatttcattttagcctctt 83  Q
    ||||||||| |||| ||||||||||| ||  ||||||||||   ||| |||| ||||||||||||||||||||||||    
T  15117158 tttggtgtttcttccttagcacacctagtgctaggaaggcca--atgttgtgttaatatatttcattttagcctctt 15117084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 8 - 86
Target Start/End: Original strand, 6216302 - 6216380
Alignment:
Q  8 ttggtgttacttctttagcacaccttgtattaggaaggcctttatgat-gtggtaatatatttcattttagcctcttaaa 86  Q
    ||||| ||||||| |||| | |||||||||||||||| || || |||| ||| ||||||||||||||||||| |||||||    
T  6216302 ttggtattacttccttagtataccttgtattaggaagaccatt-tgattgtgttaatatatttcattttagcttcttaaa 6216380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 86
Target Start/End: Complemental strand, 14215895 - 14215861
Alignment:
Q  52 tgatgtggtaatatatttcattttagcctcttaaa 86  Q
    ||||||||||||||| |||||||||||||||||||    
T  14215895 tgatgtggtaatataattcattttagcctcttaaa 14215861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 7 - 76
Target Start/End: Original strand, 1767250 - 1767319
Alignment:
Q  7 tttggtgttacttctttagcacaccttgtattaggaaggcctttatgatgtggtaatatatttcatttta 76  Q
    ||||||||| ||||||||||||| ||| |  ||||||| ||| | || |||||||||||| |||||||||    
T  1767250 tttggtgtttcttctttagcacatcttatgctaggaagacctctttgttgtggtaatataattcatttta 1767319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 79
Target Start/End: Original strand, 14001955 - 14001990
Alignment:
Q  43 aggcctttatgatgtggtaatatatttcattttagcc 79  Q
    |||||||| ||||||||||||||||||||||||||||    
T  14001955 aggccttt-tgatgtggtaatatatttcattttagcc 14001990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 44; Significance: 4e-16; HSPs: 11)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 7 - 86
Target Start/End: Complemental strand, 43026233 - 43026154
Alignment:
Q  7 tttggtgttacttctttagcacaccttgtattaggaaggcctttatgatgtggtaatatatttcattttagcctcttaaa 86  Q
    ||||||||| |||| ||||||||||||||  |||||||   ||| ||||||||||||||| |||||||||||||||||||    
T  43026233 tttggtgtttcttccttagcacaccttgtgctaggaagaagtttttgatgtggtaatataattcattttagcctcttaaa 43026154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 25 - 86
Target Start/End: Original strand, 3535947 - 3536006
Alignment:
Q  25 gcacaccttgtattaggaaggcctttatgatgtggtaatatatttcattttagcctcttaaa 86  Q
    ||||||||||| ||||||||||||||||  |||||||||||||||| ||||||| |||||||    
T  3535947 gcacaccttgtgttaggaaggcctttat--tgtggtaatatatttcgttttagcttcttaaa 3536006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 83
Target Start/End: Complemental strand, 36156097 - 36156036
Alignment:
Q  22 ttagcacaccttgtattaggaaggcctttatgatgtggtaatatatttcattttagcctctt 83  Q
    ||||||||||||||  || ||||| |||  ||||||||||||||||||||||||||||||||    
T  36156097 ttagcacaccttgtgctaagaaggtcttgttgatgtggtaatatatttcattttagcctctt 36156036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 9 - 86
Target Start/End: Original strand, 35516888 - 35516965
Alignment:
Q  9 tggtgttacttctttagcacaccttgtattaggaaggcctttatgatgtggtaatatatttcattttagcctcttaaa 86  Q
    ||||||| |||| |||||||||||| |  ||||||| | ||| ||||||| ||||||||||||||||| ||| |||||    
T  35516888 tggtgtttcttccttagcacaccttatgctaggaagacttttttgatgtgataatatatttcattttaaccttttaaa 35516965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 83
Target Start/End: Original strand, 1279304 - 1279360
Alignment:
Q  27 acaccttgtattaggaaggcctttatgatgtggtaatatatttcattttagcctctt 83  Q
    ||||||||| ||||||||| | || |||| |||||||||||||||||||| ||||||    
T  1279304 acaccttgtgttaggaaggacattttgatttggtaatatatttcattttaacctctt 1279360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 27 - 86
Target Start/End: Complemental strand, 13636733 - 13636674
Alignment:
Q  27 acaccttgtattaggaaggcctttatgatgtggtaatatatttcattttagcctcttaaa 86  Q
    |||||||||| |||||||  | || |||| ||||||||||| ||||||||||||||||||    
T  13636733 acaccttgtactaggaagaacattttgatttggtaatatatctcattttagcctcttaaa 13636674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 27 - 86
Target Start/End: Complemental strand, 13697922 - 13697863
Alignment:
Q  27 acaccttgtattaggaaggcctttatgatgtggtaatatatttcattttagcctcttaaa 86  Q
    |||||||||| |||||||  | || |||| ||||||||||| ||||||||||||||||||    
T  13697922 acaccttgtactaggaagaacattttgatttggtaatatatctcattttagcctcttaaa 13697863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 86
Target Start/End: Complemental strand, 24904990 - 24904911
Alignment:
Q  7 tttggtgttacttctttagcacaccttgtattaggaaggcctttatgatgtggtaatatatttcattttagcctcttaaa 86  Q
    ||||||||| |||| ||||||||||||||  |||||||||| ||  | || | ||||||||||||||||| | |||||||    
T  24904990 tttggtgtttcttccttagcacaccttgtgctaggaaggccatttggttgagttaatatatttcattttatcttcttaaa 24904911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 86
Target Start/End: Original strand, 47096420 - 47096479
Alignment:
Q  25 gcacaccttgtattaggaaggcctttatgatgtggtaatatatttcattttagcctcttaaa 86  Q
    |||||||||||  ||||||| ||||||||  ||||||||||||||||||||| | |||||||    
T  47096420 gcacaccttgtgctaggaagacctttatg--gtggtaatatatttcattttaacttcttaaa 47096479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 7 - 83
Target Start/End: Original strand, 9628387 - 9628464
Alignment:
Q  7 tttggtgttacttctttagcacaccttgtattaggaaggcctttatgatgtggtaata-tatttcattttagcctctt 83  Q
    ||||||||| ||||||||||||| |||||  ||||||||||||| |  | ||||||||  | ||||||||||||||||    
T  9628387 tttggtgtttcttctttagcacaacttgtgctaggaaggcctttttattatggtaatacaaattcattttagcctctt 9628464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 7 - 83
Target Start/End: Complemental strand, 10061850 - 10061773
Alignment:
Q  7 tttggtgttacttctttagcacaccttgtattaggaaggcc-tttatgatgtggtaatatatttcattttagcctctt 83  Q
    ||||||||| ||||||||||||| ||||| | | |||| || ||| || |||| ||||||||| ||||||||||||||    
T  10061850 tttggtgtttcttctttagcacaacttgtgtcaagaagaccatttttgttgtgataatatattgcattttagcctctt 10061773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 16)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 86
Target Start/End: Original strand, 22294756 - 22294824
Alignment:
Q  18 ttctttagcacaccttgtattaggaaggcctttatgatgtggtaatatatttcattttagcctcttaaa 86  Q
    ||||||||||||||||||  ||||||| ||||| ||||||||||||||| || |||||||| |||||||    
T  22294756 ttctttagcacaccttgtgctaggaagccctttttgatgtggtaatataatttattttagcatcttaaa 22294824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 86
Target Start/End: Original strand, 5761188 - 5761245
Alignment:
Q  29 accttgtattaggaaggcctttatgatgtggtaatatatttcattttagcctcttaaa 86  Q
    |||||||||||||||||||| | |||| | |||||||||| |||||||||||||||||    
T  5761188 accttgtattaggaaggcctctttgatttagtaatatattccattttagcctcttaaa 5761245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 22 - 86
Target Start/End: Original strand, 46669652 - 46669716
Alignment:
Q  22 ttagcacaccttgtattaggaaggcctttatgatgtggtaatatatttcattttagcctcttaaa 86  Q
    |||||||||||| |||||||||||| ||| |||| || |||||||  ||||||||||||||||||    
T  46669652 ttagcacaccttatattaggaaggcttttttgatatgataatataactcattttagcctcttaaa 46669716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 78
Target Start/End: Original strand, 8815548 - 8815616
Alignment:
Q  10 ggtgttacttctttagcacaccttgtattaggaaggcctttatgatgtggtaatatatttcattttagc 78  Q
    |||||| |||| ||||||| ||||||  ||||||||||| | || | ||||||||||||||||||||||    
T  8815548 ggtgtttcttccttagcactccttgtgctaggaaggcctatttgttatggtaatatatttcattttagc 8815616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 79
Target Start/End: Complemental strand, 22495266 - 22495194
Alignment:
Q  7 tttggtgttacttctttagcacaccttgtattaggaaggcctttatgatgtggtaatatatttcattttagcc 79  Q
    ||||||||| ||||||||||||| |||||  ||||||| || || |||||| ||||||||  |||||||||||    
T  22495266 tttggtgtttcttctttagcacaacttgtgctaggaagaccattttgatgttgtaatataaatcattttagcc 22495194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 83
Target Start/End: Complemental strand, 30739429 - 30739352
Alignment:
Q  4 gagtttggtgttacttctttagcacaccttgtattaggaaggcctttatgatgtggtaatatatttcattttagcctctt 83  Q
    ||||||| |||| |||| ||||||||||| ||  ||||||||||   ||| |||| ||||||||||||||||||||||||    
T  30739429 gagtttgatgtttcttccttagcacacctagtggtaggaaggcca--atgttgtgttaatatatttcattttagcctctt 30739352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 86
Target Start/End: Complemental strand, 32293523 - 32293463
Alignment:
Q  26 cacaccttgtattaggaaggcctttatgatgtggtaatatatttcattttagcctcttaaa 86  Q
    |||||||||| |||||||| | ||| |||| ||||||||||||||||||||  ||||||||    
T  32293523 cacaccttgtgttaggaagacttttttgatatggtaatatatttcattttaatctcttaaa 32293463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 83
Target Start/End: Complemental strand, 42527259 - 42527184
Alignment:
Q  7 tttggtgttacttctttagcacaccttgtattaggaaggcctttatgatgtggtaatatatttcattttagcctctt 83  Q
    ||||||||| |||| ||  ||||||||||  ||||||||||||| |||||| |||||||| |||||||| |||||||    
T  42527259 tttggtgtttcttccttgacacaccttgtgctaggaaggccttt-tgatgtagtaatataattcatttttgcctctt 42527184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 86
Target Start/End: Original strand, 45637625 - 45637700
Alignment:
Q  10 ggtgttacttctttagcacaccttgtattaggaaggcctttatgatgtggtaatatatttcattttagcctcttaaa 86  Q
    |||||| |||| ||||||||||||||  |||||||||||   || |||||||||||| |||||||||||| ||||||    
T  45637625 ggtgtttcttccttagcacaccttgtgctaggaaggcctgattgttgtggtaatata-ttcattttagccccttaaa 45637700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 81
Target Start/End: Original strand, 18922105 - 18922177
Alignment:
Q  7 tttggtgttacttctttagcacaccttgtattaggaaggcctttatgatgtggtaatatatttcattttagcctc 81  Q
    ||||||||| |||| ||||||||||| ||  ||||||||||   ||| |||| ||||||||||||||||||||||    
T  18922105 tttggtgtttcttccttagcacacctagtgctaggaaggcca--atgttgtgttaatatatttcattttagcctc 18922177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 86
Target Start/End: Complemental strand, 21204776 - 21204742
Alignment:
Q  52 tgatgtggtaatatatttcattttagcctcttaaa 86  Q
    ||||||||||||||||||||||||||| |||||||    
T  21204776 tgatgtggtaatatatttcattttagcatcttaaa 21204742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 86
Target Start/End: Complemental strand, 30972264 - 30972230
Alignment:
Q  52 tgatgtggtaatatatttcattttagcctcttaaa 86  Q
    |||||||||||||||||||||| ||||||||||||    
T  30972264 tgatgtggtaatatatttcattgtagcctcttaaa 30972230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 29 - 86
Target Start/End: Original strand, 5727325 - 5727382
Alignment:
Q  29 accttgtattaggaaggcctttatgatgtggtaatatatttcattttagcctcttaaa 86  Q
    |||||||||||| ||||||| | |||| | |||||||||| ||||||| |||||||||    
T  5727325 accttgtattagaaaggcctctttgatttagtaatatattccattttaacctcttaaa 5727382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 7 - 83
Target Start/End: Complemental strand, 13608859 - 13608782
Alignment:
Q  7 tttggtgttacttctttagcacaccttgtattaggaaggcctttatgatgtggtaata-tatttcattttagcctctt 83  Q
    ||||||||| ||||||||||||| |||||  ||||||||||||| |  | ||||||||  | ||||||||||||||||    
T  13608859 tttggtgtttcttctttagcacaacttgtgctaggaaggcctttttattatggtaatacaaattcattttagcctctt 13608782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 38 - 83
Target Start/End: Original strand, 19477514 - 19477559
Alignment:
Q  38 taggaaggcctttatgatgtggtaatatatttcattttagcctctt 83  Q
    |||||||| |||| || ||||||||||||||||||||||| |||||    
T  19477514 taggaaggactttttgttgtggtaatatatttcattttagtctctt 19477559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 88
Target Start/End: Complemental strand, 41995877 - 41995841
Alignment:
Q  52 tgatgtggtaatatatttcattttagcctcttaaata 88  Q
    ||||||||||||||| |||||||||||||||| ||||    
T  41995877 tgatgtggtaatataattcattttagcctcttcaata 41995841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0777 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0777
Description:

Target: scaffold0777; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 7 - 86
Target Start/End: Original strand, 1075 - 1154
Alignment:
Q  7 tttggtgttacttctttagcacaccttgtattaggaaggcctttatgatgtggtaatatatttcattttagcctcttaaa 86  Q
    |||||| || |||| ||||||||||||||  ||||||||||||  ||| || ||||||||||||||||||| ||||||||    
T  1075 tttggtatttcttccttagcacaccttgtgctaggaaggccttgttgacgtagtaatatatttcattttagtctcttaaa 1154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 5)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 9 - 83
Target Start/End: Original strand, 43776414 - 43776488
Alignment:
Q  9 tggtgttacttctttagcacaccttgtattaggaaggcctttatgatgtggtaatatatttcattttagcctctt 83  Q
    ||||||| |||| |||| |||||||||  |||||||||| || || |||||||||||| ||||||||||||||||    
T  43776414 tggtgtttcttccttagtacaccttgtgctaggaaggccattttgttgtggtaatataattcattttagcctctt 43776488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 37 - 86
Target Start/End: Complemental strand, 13002702 - 13002653
Alignment:
Q  37 ttaggaaggcctttatgatgtggtaatatatttcattttagcctcttaaa 86  Q
    ||||||||| |||| |||||||||||||||||| ||||||||||||||||    
T  13002702 ttaggaaggactttttgatgtggtaatatattttattttagcctcttaaa 13002653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 33283007 - 33283072
Alignment:
Q  18 ttctttagcacaccttgtattaggaaggcctttatgatgtggtaatatatttcattttagcctctt 83  Q
    |||||||| |||||||||| ||||||| ||| | |||| || ||||||||||||||||||||||||    
T  33283007 ttctttagtacaccttgtactaggaagacctctttgatttgataatatatttcattttagcctctt 33283072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 29 - 86
Target Start/End: Original strand, 21524030 - 21524087
Alignment:
Q  29 accttgtattaggaaggcctttatgatgtggtaatatatttcattttagcctcttaaa 86  Q
    ||||||| ||||||||| | || ||||||||||||||| |||||||||||||| ||||    
T  21524030 accttgtgttaggaaggaccttttgatgtggtaatataattcattttagcctcctaaa 21524087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 17 - 86
Target Start/End: Original strand, 4784878 - 4784947
Alignment:
Q  17 cttctttagcacaccttgtattaggaaggcctttatgatgtggtaatatatttcattttagcctcttaaa 86  Q
    |||| |||| ||||||| || |||||||| |  | |||| |||||||||||| |||||||||||||||||    
T  4784878 cttccttagtacaccttatactaggaaggtcactttgatttggtaatatattccattttagcctcttaaa 4784947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 38; Significance: 0.000000000001; HSPs: 5)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 86
Target Start/End: Original strand, 36179075 - 36179144
Alignment:
Q  17 cttctttagcacaccttgtattaggaaggcctttatgatgtggtaatatatttcattttagcctcttaaa 86  Q
    |||| |||||||||||| |||||||||  ||||| || |||||||||| | |||||||||||||||||||    
T  36179075 cttccttagcacaccttatattaggaaaacctttttgttgtggtaatacaattcattttagcctcttaaa 36179144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 37 - 86
Target Start/End: Original strand, 38409214 - 38409262
Alignment:
Q  37 ttaggaaggcctttatgatgtggtaatatatttcattttagcctcttaaa 86  Q
    |||||||||||||| || |||||||||||| |||||||||||||||||||    
T  38409214 ttaggaaggccttt-tgttgtggtaatataattcattttagcctcttaaa 38409262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 83
Target Start/End: Complemental strand, 40426833 - 40426759
Alignment:
Q  7 tttggtgttacttctttagcacaccttgtattaggaaggcctttatgatgtggtaatatatttcattttagcctctt 83  Q
    ||||||||| |||| ||||||||||| || ||||||||||| |  || |||| |||||||||||||||||| |||||    
T  40426833 tttggtgtttcttccttagcacacctagtgttaggaaggccat--tgttgtgttaatatatttcattttagactctt 40426759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 83
Target Start/End: Complemental strand, 34740614 - 34740534
Alignment:
Q  4 gagtttggtgttacttctttagcacaccttgtattaggaaggcc-tttatgatgtggtaatatatttcattttagcctctt 83  Q
    ||||||||||||||||||||  |||| |||||  |||||||||| ||| |  |||||||||||||| |||||||| |||||    
T  34740614 gagtttggtgttacttctttgacacatcttgtgctaggaaggccatttttattgtggtaatatattgcattttagtctctt 34740534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 80
Target Start/End: Complemental strand, 45130984 - 45130944
Alignment:
Q  40 ggaaggcctttatgatgtggtaatatatttcattttagcct 80  Q
    |||||| |||| ||||||||||||||| |||||||||||||    
T  45130984 ggaaggactttttgatgtggtaatataattcattttagcct 45130944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 38; Significance: 0.000000000001; HSPs: 8)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 10 - 83
Target Start/End: Original strand, 52251539 - 52251612
Alignment:
Q  10 ggtgttacttctttagcacaccttgtattaggaaggcctttatgatgtggtaatatatttcattttagcctctt 83  Q
    |||||| |||| ||||||| ||||||  |||||||||| || || ||||| |||||||||||||||||||||||    
T  52251539 ggtgtttcttccttagcactccttgtgctaggaaggccgttttgttgtgggaatatatttcattttagcctctt 52251612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 7 - 86
Target Start/End: Original strand, 17128684 - 17128764
Alignment:
Q  7 tttggtgttacttctttagcacaccttgtattaggaaggcctttatgatgtggtaata-tatttcattttagcctcttaaa 86  Q
    ||||||||| |||| |||||||| |||||  ||||||| || || |||||||||||||  |||||||||||||||||||||    
T  17128684 tttggtgtttcttccttagcacatcttgtgctaggaagacccttttgatgtggtaatacaatttcattttagcctcttaaa 17128764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 83
Target Start/End: Original strand, 8527213 - 8527290
Alignment:
Q  7 tttggtgttacttctttagcacaccttgtattaggaaggcctttatgatgtggtaata-tatttcattttagcctctt 83  Q
    ||||||||| |||| |||||||| ||| | | |||||||||||| |||||||||||||  |||| |||||||||||||    
T  8527213 tttggtgtttcttccttagcacatcttatgtcaggaaggcctttttgatgtggtaatacaattttattttagcctctt 8527290  T

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Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 37 - 86
Target Start/End: Original strand, 23452645 - 23452694
Alignment:
Q  37 ttaggaaggcctttatgatgtggtaatatatttcattttagcctcttaaa 86  Q
    |||||||| ||||| ||||||| ||||||| |||||||||||||||||||    
T  23452645 ttaggaagccctttttgatgtgataatataattcattttagcctcttaaa 23452694  T

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Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 83
Target Start/End: Original strand, 42476509 - 42476586
Alignment:
Q  7 tttggtgttacttctttagcacaccttgtattaggaaggcc-tttatgatgtggtaatatatttcattttagcctctt 83  Q
    ||||||||| ||||||||||||| ||| |  |||||||||| ||| || |||||||||||||| ||||||| ||||||    
T  42476509 tttggtgtttcttctttagcacaacttatgctaggaaggccatttttgttgtggtaatatattgcattttaacctctt 42476586  T

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Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 86
Target Start/End: Complemental strand, 2653627 - 2653552
Alignment:
Q  10 ggtgttacttctttagcacaccttgtattaggaaggcctttatgatgtggtaatatatttcattttagcctcttaaa 86  Q
    |||||| |||| ||||||||||||||  |||||||||||   || |||||||||||| |||||||||||| ||||||    
T  2653627 ggtgtttcttccttagcacaccttgtgctaggaaggcctgattgttgtggtaatata-ttcattttagccccttaaa 2653552  T

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Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 52 - 83
Target Start/End: Complemental strand, 16908913 - 16908882
Alignment:
Q  52 tgatgtggtaatatatttcattttagcctctt 83  Q
    ||||||||||||||||||||||||||||||||    
T  16908913 tgatgtggtaatatatttcattttagcctctt 16908882  T

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Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 28 - 83
Target Start/End: Original strand, 25530245 - 25530300
Alignment:
Q  28 caccttgtattaggaaggcctttatgatgtggtaatatatttcattttagcctctt 83  Q
    ||||||||  ||||||| || || |||| |||||||||||||||||||||||||||    
T  25530245 caccttgtgctaggaagaccattttgatttggtaatatatttcattttagcctctt 25530300  T

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Target: scaffold0009 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 55 - 86
Target Start/End: Original strand, 183841 - 183872
Alignment:
Q  55 tgtggtaatatatttcattttagcctcttaaa 86  Q
    ||||||||||||||||||||||||||||||||    
T  183841 tgtggtaatatatttcattttagcctcttaaa 183872  T

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