View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8403_low_39 (Length: 223)

Name: NF8403_low_39
Description: NF8403
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8403_low_39
NF8403_low_39
[»] chr3 (46 HSPs)
chr3 (150-223)||(37820505-37820578)
chr3 (150-223)||(996114-996187)
chr3 (150-223)||(10139174-10139247)
chr3 (150-223)||(20498314-20498387)
chr3 (150-223)||(33807826-33807899)
chr3 (149-223)||(33996568-33996642)
chr3 (149-223)||(44762064-44762138)
chr3 (150-223)||(3206233-3206306)
chr3 (150-223)||(3999673-3999746)
chr3 (150-223)||(19253932-19254005)
chr3 (154-223)||(35337840-35337909)
chr3 (150-223)||(40246949-40247022)
chr3 (154-223)||(54625697-54625766)
chr3 (150-217)||(6589675-6589742)
chr3 (154-223)||(25418471-25418540)
chr3 (150-223)||(29448886-29448959)
chr3 (157-223)||(22057867-22057933)
chr3 (150-219)||(6035081-6035150)
chr3 (150-210)||(6131261-6131321)
chr3 (150-222)||(53929156-53929228)
chr3 (149-223)||(52114634-52114708)
chr3 (150-223)||(51699508-51699581)
chr3 (150-223)||(1439922-1439995)
chr3 (159-223)||(29030110-29030174)
chr3 (150-223)||(5825167-5825240)
chr3 (150-223)||(17946393-17946466)
chr3 (150-223)||(18749717-18749790)
chr3 (150-223)||(36674158-36674231)
chr3 (150-223)||(40897249-40897322)
chr3 (150-223)||(54628949-54629022)
chr3 (149-223)||(50903267-50903341)
chr3 (182-223)||(1440012-1440053)
chr3 (150-223)||(11431631-11431704)
chr3 (150-223)||(32580281-32580354)
chr3 (150-223)||(34484058-34484131)
chr3 (150-223)||(51737754-51737827)
chr3 (150-222)||(31646312-31646384)
chr3 (154-223)||(26107366-26107435)
chr3 (150-195)||(27899467-27899512)
chr3 (150-223)||(44906541-44906614)
chr3 (182-223)||(52618025-52618066)
chr3 (154-222)||(55235290-55235359)
chr3 (182-223)||(20833097-20833138)
chr3 (182-223)||(48379262-48379303)
chr3 (154-195)||(52080050-52080091)
chr3 (182-222)||(52810484-52810524)
[»] scaffold0400 (1 HSPs)
scaffold0400 (150-223)||(15061-15134)
[»] scaffold0365 (1 HSPs)
scaffold0365 (150-223)||(15704-15777)
[»] chr8 (25 HSPs)
chr8 (150-223)||(7506926-7506999)
chr8 (150-223)||(24501840-24501913)
chr8 (150-223)||(10392264-10392337)
chr8 (150-223)||(26374457-26374530)
chr8 (150-223)||(42937457-42937530)
chr8 (150-223)||(42938144-42938217)
chr8 (149-221)||(5576646-5576718)
chr8 (150-221)||(42735304-42735375)
chr8 (150-223)||(23115196-23115269)
chr8 (150-222)||(2704846-2704918)
chr8 (156-222)||(4950049-4950115)
chr8 (150-223)||(14782162-14782235)
chr8 (150-223)||(44725837-44725910)
chr8 (150-221)||(26856175-26856246)
chr8 (150-223)||(4403213-4403286)
chr8 (150-223)||(9288484-9288557)
chr8 (150-223)||(18958754-18958827)
chr8 (150-222)||(43959764-43959826)
chr8 (149-221)||(19717907-19717979)
chr8 (150-223)||(10295407-10295481)
chr8 (149-223)||(13478276-13478350)
chr8 (182-223)||(43166749-43166790)
chr8 (150-223)||(39467495-39467568)
chr8 (150-195)||(41479221-41479266)
chr8 (150-223)||(8410423-8410498)
[»] chr7 (44 HSPs)
chr7 (150-223)||(34695380-34695453)
chr7 (150-223)||(43581117-43581190)
chr7 (150-223)||(44343423-44343496)
chr7 (150-222)||(7719287-7719359)
chr7 (151-223)||(32142945-32143017)
chr7 (150-222)||(39219404-39219476)
chr7 (152-223)||(43679521-43679592)
chr7 (150-220)||(18914762-18914832)
chr7 (150-223)||(973291-973364)
chr7 (150-223)||(7718389-7718462)
chr7 (150-223)||(30440903-30440976)
chr7 (150-223)||(40996676-40996749)
chr7 (150-223)||(47879275-47879348)
chr7 (150-223)||(47914373-47914446)
chr7 (150-221)||(12893517-12893588)
chr7 (152-223)||(20275292-20275363)
chr7 (148-223)||(12963801-12963876)
chr7 (150-223)||(7113559-7113632)
chr7 (154-223)||(10068567-10068636)
chr7 (150-223)||(34009120-34009193)
chr7 (149-223)||(33382737-33382811)
chr7 (150-223)||(23101398-23101471)
chr7 (150-223)||(28342447-28342520)
chr7 (150-223)||(29614791-29614864)
chr7 (150-223)||(39784199-39784272)
chr7 (150-221)||(43187384-43187455)
chr7 (149-223)||(8675433-8675507)
chr7 (153-223)||(25805792-25805862)
chr7 (150-195)||(727638-727683)
chr7 (154-223)||(3023026-3023095)
chr7 (150-223)||(28034832-28034905)
chr7 (150-223)||(41827404-41827477)
chr7 (150-222)||(9882263-9882335)
chr7 (154-222)||(18838490-18838558)
chr7 (150-223)||(7993242-7993315)
chr7 (190-223)||(31638982-31639015)
chr7 (150-223)||(37972894-37972967)
chr7 (165-217)||(10617024-10617076)
chr7 (149-188)||(3797092-3797131)
chr7 (150-197)||(9179996-9180043)
chr7 (148-221)||(1470259-1470331)
chr7 (150-223)||(12740473-12740545)
chr7 (154-222)||(44256797-44256865)
chr7 (186-222)||(46405494-46405530)
[»] chr6 (13 HSPs)
chr6 (150-223)||(6197505-6197578)
chr6 (150-223)||(1391729-1391802)
chr6 (150-223)||(2300765-2300838)
chr6 (150-223)||(28002770-28002843)
chr6 (150-223)||(29076704-29076777)
chr6 (150-223)||(29111678-29111751)
chr6 (154-223)||(7051950-7052019)
chr6 (150-223)||(31895801-31895874)
chr6 (150-223)||(34773514-34773587)
chr6 (150-223)||(14262460-14262533)
chr6 (150-223)||(34759077-34759150)
chr6 (157-217)||(657065-657122)
chr6 (150-219)||(7497185-7497253)
[»] chr5 (17 HSPs)
chr5 (150-223)||(7016766-7016839)
chr5 (150-223)||(21147173-21147246)
chr5 (150-223)||(33656068-33656141)
chr5 (150-222)||(5272946-5273018)
chr5 (150-223)||(849253-849326)
chr5 (156-223)||(27458983-27459050)
chr5 (150-223)||(139379-139452)
chr5 (156-220)||(6460901-6460965)
chr5 (156-223)||(32157930-32157997)
chr5 (149-223)||(1152129-1152203)
chr5 (150-223)||(13926037-13926110)
chr5 (150-223)||(14000132-14000205)
chr5 (150-223)||(7947600-7947673)
chr5 (150-223)||(4550284-4550357)
chr5 (150-223)||(39852451-39852524)
chr5 (150-222)||(9689764-9689836)
chr5 (162-222)||(14465266-14465326)
[»] chr4 (48 HSPs)
chr4 (150-223)||(1044912-1044985)
chr4 (150-223)||(25331236-25331309)
chr4 (150-223)||(41881110-41881183)
chr4 (152-223)||(7249795-7249866)
chr4 (150-223)||(55302948-55303021)
chr4 (150-222)||(30009705-30009777)
chr4 (150-222)||(34228611-34228683)
chr4 (151-222)||(25446156-25446227)
chr4 (150-221)||(39479383-39479454)
chr4 (152-222)||(28541804-28541874)
chr4 (150-223)||(12113050-12113123)
chr4 (150-223)||(19740936-19741009)
chr4 (150-223)||(32950864-32950937)
chr4 (150-223)||(41320915-41320988)
chr4 (150-222)||(22202121-22202193)
chr4 (157-223)||(7007479-7007545)
chr4 (156-222)||(24131016-24131082)
chr4 (150-223)||(37046478-37046552)
chr4 (150-222)||(1112999-1113071)
chr4 (154-223)||(3436698-3436767)
chr4 (150-223)||(42786789-42786862)
chr4 (150-223)||(53275944-53276017)
chr4 (150-222)||(27454106-27454178)
chr4 (159-223)||(9163181-9163245)
chr4 (150-216)||(8711978-8712044)
chr4 (150-223)||(5441509-5441582)
chr4 (166-223)||(23465060-23465117)
chr4 (182-223)||(25504699-25504740)
chr4 (150-223)||(27768161-27768234)
chr4 (150-223)||(44770881-44770954)
chr4 (150-223)||(54341249-54341322)
chr4 (150-195)||(31314770-31314815)
chr4 (150-223)||(37828430-37828503)
chr4 (150-223)||(48261232-48261305)
chr4 (150-223)||(54853496-54853569)
chr4 (150-216)||(24736447-24736513)
chr4 (153-223)||(37915932-37916002)
chr4 (150-223)||(46635676-46635743)
chr4 (154-203)||(39307285-39307334)
chr4 (150-222)||(40537188-40537250)
chr4 (150-197)||(11090435-11090482)
chr4 (188-223)||(23987319-23987354)
chr4 (150-197)||(56445383-56445430)
chr4 (182-223)||(20021438-20021479)
chr4 (166-223)||(28371029-28371086)
chr4 (182-223)||(32322196-32322237)
chr4 (154-223)||(51321026-51321095)
chr4 (186-222)||(29649731-29649767)
[»] chr2 (23 HSPs)
chr2 (150-223)||(20605343-20605416)
chr2 (150-223)||(24776462-24776535)
chr2 (150-223)||(31170654-31170727)
chr2 (150-223)||(1789549-1789622)
chr2 (150-223)||(5093077-5093150)
chr2 (150-223)||(12407487-12407560)
chr2 (150-223)||(14198607-14198680)
chr2 (150-223)||(16269798-16269871)
chr2 (150-223)||(32125360-32125433)
chr2 (150-223)||(35317169-35317242)
chr2 (152-223)||(43847753-43847824)
chr2 (150-222)||(305495-305567)
chr2 (150-223)||(9120233-9120306)
chr2 (154-222)||(22551797-22551865)
chr2 (162-222)||(44765883-44765943)
chr2 (150-223)||(26788893-26788966)
chr2 (150-223)||(33135730-33135803)
chr2 (150-222)||(43078671-43078743)
chr2 (150-223)||(18177374-18177447)
chr2 (150-223)||(28844662-28844735)
chr2 (154-222)||(10657514-10657582)
chr2 (182-223)||(25288266-25288307)
chr2 (186-223)||(28740349-28740386)
[»] chr1 (31 HSPs)
chr1 (150-223)||(6304280-6304353)
chr1 (150-223)||(49198297-49198370)
chr1 (150-223)||(50192578-50192651)
chr1 (150-222)||(45536044-45536116)
chr1 (150-223)||(19451836-19451909)
chr1 (154-223)||(45760041-45760110)
chr1 (150-223)||(21222246-21222319)
chr1 (149-222)||(28824400-28824473)
chr1 (150-223)||(31572225-31572298)
chr1 (150-223)||(35279771-35279844)
chr1 (150-223)||(35679156-35679229)
chr1 (154-223)||(47780810-47780879)
chr1 (150-223)||(49418183-49418256)
chr1 (151-222)||(48524419-48524490)
chr1 (150-223)||(32588981-32589054)
chr1 (154-223)||(47654383-47654452)
chr1 (157-221)||(730250-730314)
chr1 (149-222)||(29556204-29556277)
chr1 (150-223)||(9577460-9577533)
chr1 (152-222)||(37014670-37014740)
chr1 (150-223)||(6312673-6312746)
chr1 (150-223)||(29396416-29396489)
chr1 (150-223)||(51701679-51701752)
chr1 (150-222)||(48177490-48177562)
chr1 (150-223)||(15835081-15835154)
chr1 (150-223)||(25612256-25612329)
chr1 (150-223)||(46328141-46328214)
chr1 (150-223)||(9322528-9322601)
chr1 (150-223)||(28387421-28387494)
chr1 (190-220)||(955852-955882)
chr1 (150-195)||(33025630-33025675)
[»] scaffold0004 (1 HSPs)
scaffold0004 (150-222)||(102202-102274)
[»] scaffold0113 (1 HSPs)
scaffold0113 (150-223)||(38923-38996)
[»] scaffold0151 (1 HSPs)
scaffold0151 (150-223)||(38633-38705)
[»] scaffold0276 (1 HSPs)
scaffold0276 (150-223)||(567-640)
[»] scaffold0037 (1 HSPs)
scaffold0037 (150-223)||(100317-100390)
[»] scaffold0054 (1 HSPs)
scaffold0054 (150-221)||(36935-37006)
[»] scaffold0110 (1 HSPs)
scaffold0110 (150-223)||(39645-39718)
[»] scaffold0839 (1 HSPs)
scaffold0839 (150-222)||(3720-3792)
[»] scaffold0543 (1 HSPs)
scaffold0543 (150-223)||(10666-10739)
[»] scaffold0042 (1 HSPs)
scaffold0042 (182-222)||(58136-58176)
[»] scaffold1504 (1 HSPs)
scaffold1504 (150-217)||(976-1042)


Alignment Details
Target: chr3 (Bit Score: 70; Significance: 1e-31; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 150 - 223
Target Start/End: Original strand, 37820505 - 37820578
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  37820505 aaagactttttcatgctaaaatttcactggaaaatcccacaaaatccatcaaaatctgatttattaaacaatcc 37820578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 150 - 223
Target Start/End: Original strand, 996114 - 996187
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  996114 aaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcc 996187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 150 - 223
Target Start/End: Original strand, 10139174 - 10139247
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  10139174 aaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcc 10139247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 150 - 223
Target Start/End: Complemental strand, 20498387 - 20498314
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  20498387 aaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcc 20498314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 150 - 223
Target Start/End: Original strand, 33807826 - 33807899
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  33807826 aaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcc 33807899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 149 - 223
Target Start/End: Original strand, 33996568 - 33996642
Alignment:
Q  149 aaaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    ||||||||||||||||||||||||||||| || |||||| |||||||||||||||||||||||||||||||||||    
T  33996568 aaaagactttttcatgctaaaatttcactagaaaatccctcaaaatccatcaaaatctgatttattaaacaatcc 33996642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 149 - 223
Target Start/End: Original strand, 44762064 - 44762138
Alignment:
Q  149 aaaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    |||||||||||||||||||||||||||||  | ||||||||||||||||||||||||||||||||||||||||||    
T  44762064 aaaagactttttcatgctaaaatttcactaaaaaatcccacaaaatccatcaaaatctgatttattaaacaatcc 44762138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 150 - 223
Target Start/End: Original strand, 3206233 - 3206306
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    |||||||||||| ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  3206233 aaagactttttcttgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcc 3206306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 150 - 223
Target Start/End: Original strand, 3999673 - 3999746
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    |||||||||||||| ||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  3999673 aaagactttttcattctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcc 3999746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 150 - 223
Target Start/End: Complemental strand, 19254005 - 19253932
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||||||||| ||||||||||||||||    
T  19254005 aaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatcttatttattaaacaatcc 19253932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 154 - 223
Target Start/End: Complemental strand, 35337909 - 35337840
Alignment:
Q  154 actttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    |||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  35337909 actttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcc 35337840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 150 - 223
Target Start/End: Complemental strand, 40247022 - 40246949
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    |||||||||||||||| ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  40247022 aaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcc 40246949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 154 - 223
Target Start/End: Complemental strand, 54625766 - 54625697
Alignment:
Q  154 actttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    |||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  54625766 actttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcc 54625697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 150 - 217
Target Start/End: Complemental strand, 6589742 - 6589675
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaa 217  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||    
T  6589742 aaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaa 6589675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 154 - 223
Target Start/End: Complemental strand, 25418540 - 25418471
Alignment:
Q  154 actttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    |||||||||||| ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  25418540 actttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcc 25418471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 150 - 223
Target Start/End: Original strand, 29448886 - 29448959
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    ||||||||||| |||||||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||    
T  29448886 aaagacttttttatgctaaaattttactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcc 29448959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 157 - 223
Target Start/End: Complemental strand, 22057933 - 22057867
Alignment:
Q  157 ttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    |||||||| |||||||||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  22057933 ttttcatgttaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcc 22057867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 150 - 219
Target Start/End: Original strand, 6035081 - 6035150
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaaca 219  Q
    |||||||||||||||||||||||| ||| || ||||||||||||||||||||||||| ||||||||||||    
T  6035081 aaagactttttcatgctaaaattttactagaaaatcccacaaaatccatcaaaatctaatttattaaaca 6035150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 150 - 210
Target Start/End: Original strand, 6131261 - 6131321
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatt 210  Q
    |||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||    
T  6131261 aaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatt 6131321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 150 - 222
Target Start/End: Original strand, 53929156 - 53929228
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatc 222  Q
    ||||| |||||||||||||||||||||| || ||||| ||||||||||||||||||| |||||||||||||||    
T  53929156 aaagattttttcatgctaaaatttcactagaaaatcctacaaaatccatcaaaatcttatttattaaacaatc 53929228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 149 - 223
Target Start/End: Complemental strand, 52114708 - 52114634
Alignment:
Q  149 aaaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    |||||| |||||||||||||||||| ||| || ||| |||||||||| |||||||||||||||||||||||||||    
T  52114708 aaaagattttttcatgctaaaattttactagaaaattccacaaaatctatcaaaatctgatttattaaacaatcc 52114634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 150 - 223
Target Start/End: Original strand, 51699508 - 51699581
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    ||||| |||||||||||||||||||||| || ||||||||||||| ||||||||||| ||||||||| ||||||    
T  51699508 aaagattttttcatgctaaaatttcactagaaaatcccacaaaattcatcaaaatcttatttattaaccaatcc 51699581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 150 - 223
Target Start/End: Original strand, 1439922 - 1439995
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    |||||||||||||| | ||||||| ||| || |||||||||||||| |||||||||| ||||||||||||||||    
T  1439922 aaagactttttcataccaaaattttactagaaaatcccacaaaatctatcaaaatctaatttattaaacaatcc 1439995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 159 - 223
Target Start/End: Complemental strand, 29030174 - 29030110
Alignment:
Q  159 ttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    |||||| |||||||||| | || ||| ||||||||||||||||||||||||||||||||||||||    
T  29030174 ttcatgttaaaatttcattagaaaattccacaaaatccatcaaaatctgatttattaaacaatcc 29030110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 150 - 223
Target Start/End: Complemental strand, 5825240 - 5825167
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    |||| ||||||||||||| |||||||||  | |||||||||||||| |||||||||  ||||||||||||||||    
T  5825240 aaagcctttttcatgctagaatttcactaaaaaatcccacaaaatctatcaaaatccaatttattaaacaatcc 5825167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 150 - 223
Target Start/End: Complemental strand, 17946466 - 17946393
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    |||||||||||| || ||||||| ||||  | ||||||||||||||||||||||||  ||||||||||||||||    
T  17946466 aaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatcc 17946393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 150 - 223
Target Start/End: Complemental strand, 18749790 - 18749717
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    |||||||||||| || ||||||| ||||  | ||||||||||||||||||||||||  ||||||||||||||||    
T  18749790 aaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatcc 18749717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 150 - 223
Target Start/End: Original strand, 36674158 - 36674231
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    |||||||||||| || ||||||| ||||  | ||||||||||||||||||||||||  ||||||||||||||||    
T  36674158 aaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatcc 36674231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 150 - 223
Target Start/End: Complemental strand, 40897322 - 40897249
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    |||||||||||| || ||||||| ||||  | ||||||||||||||||||||||||  ||||||||||||||||    
T  40897322 aaagactttttcttgttaaaattacactataaaatcccacaaaatccatcaaaatccaatttattaaacaatcc 40897249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 150 - 223
Target Start/End: Complemental strand, 54629022 - 54628949
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    |||||||||||| || ||||||| ||||  | ||||||||||||||||||||||||  ||||||||||||||||    
T  54629022 aaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatcc 54628949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 149 - 223
Target Start/End: Original strand, 50903267 - 50903341
Alignment:
Q  149 aaaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    |||||| |||||| || ||||||| ||||  | ||||||||||||||||||||||||  ||||||||||||||||    
T  50903267 aaaagattttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatcc 50903341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 223
Target Start/End: Original strand, 1440012 - 1440053
Alignment:
Q  182 aatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    ||||||| ||||||||||||||||||||||||||||||||||    
T  1440012 aatcccataaaatccatcaaaatctgatttattaaacaatcc 1440053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 150 - 223
Target Start/End: Complemental strand, 11431704 - 11431631
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    |||||||||||| || ||||||| ||||  | |||||||||||||||| |||||||  ||||||||||||||||    
T  11431704 aaagactttttcttgttaaaattacactacaaaatcccacaaaatccaccaaaatccaatttattaaacaatcc 11431631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 150 - 223
Target Start/End: Complemental strand, 32580354 - 32580281
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    |||||||||||| || ||||||| ||||  | |||||| |||||||||||||||||  ||||||||||||||||    
T  32580354 aaagactttttcttgttaaaattacactacaaaatccctcaaaatccatcaaaatccaatttattaaacaatcc 32580281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 150 - 223
Target Start/End: Original strand, 34484058 - 34484131
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    ||||| |||||| || ||||||| ||||  | ||||||||||||||||||||||||  ||||||||||||||||    
T  34484058 aaagattttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatcc 34484131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 150 - 223
Target Start/End: Original strand, 51737754 - 51737827
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    |||||||||||| || ||||||| |||   | ||||||||||||||||||||||||  ||||||||||||||||    
T  51737754 aaagactttttcttgttaaaattacacaacaaaatcccacaaaatccatcaaaatccaatttattaaacaatcc 51737827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 150 - 222
Target Start/End: Original strand, 31646312 - 31646384
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatc 222  Q
    |||||||||||| || ||||||| ||||  | ||||||||||||||||||||||||  ||| |||||||||||    
T  31646312 aaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaattcattaaacaatc 31646384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 154 - 223
Target Start/End: Complemental strand, 26107435 - 26107366
Alignment:
Q  154 actttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    |||||||| || ||||||| ||||  | |||| |||||||||||||||||||  ||||||||||||||||    
T  26107435 actttttcttgttaaaattacactacaaaatcacacaaaatccatcaaaatccaatttattaaacaatcc 26107366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 195
Target Start/End: Complemental strand, 27899512 - 27899467
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatc 195  Q
    |||||||||||||||||||||||||||| || ||||| ||||||||    
T  27899512 aaagactttttcatgctaaaatttcactagaaaatcctacaaaatc 27899467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 223
Target Start/End: Original strand, 44906541 - 44906614
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    |||||| ||||| || ||||||| ||||  | ||||||||||||| ||||||||||  ||||||||||||||||    
T  44906541 aaagacattttcttgttaaaattacactacaaaatcccacaaaattcatcaaaatccaatttattaaacaatcc 44906614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 223
Target Start/End: Original strand, 52618025 - 52618066
Alignment:
Q  182 aatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    ||||||||||||||||||||||||  ||||||||||||||||    
T  52618025 aatcccacaaaatccatcaaaatccaatttattaaacaatcc 52618066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 154 - 222
Target Start/End: Complemental strand, 55235359 - 55235290
Alignment:
Q  154 actttttcatgctaaaatttcactggataatcccac-aaaatccatcaaaatctgatttattaaacaatc 222  Q
    ||||||| |||||||||||||| | || |||||||| |||||||||||||| |  |||||||||||||||    
T  55235359 acttttttatgctaaaatttcattagaaaatcccacaaaaatccatcaaaaaccaatttattaaacaatc 55235290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 223
Target Start/End: Complemental strand, 20833138 - 20833097
Alignment:
Q  182 aatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    |||| |||||||||||||||||||  ||||||||||||||||    
T  20833138 aatctcacaaaatccatcaaaatccaatttattaaacaatcc 20833097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 223
Target Start/End: Complemental strand, 48379303 - 48379262
Alignment:
Q  182 aatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    |||||||||||||||||||||||   ||||||||||||||||    
T  48379303 aatcccacaaaatccatcaaaattcaatttattaaacaatcc 48379262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 195
Target Start/End: Complemental strand, 52080091 - 52080050
Alignment:
Q  154 actttttcatgctaaaatttcactggataatcccacaaaatc 195  Q
    |||||||||||||||||||||| | || ||||||||||||||    
T  52080091 actttttcatgctaaaatttcattagaaaatcccacaaaatc 52080050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 222
Target Start/End: Complemental strand, 52810524 - 52810484
Alignment:
Q  182 aatcccacaaaatccatcaaaatctgatttattaaacaatc 222  Q
    |||||||||||||||||||||||   |||||||||||||||    
T  52810524 aatcccacaaaatccatcaaaattcaatttattaaacaatc 52810484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0400 (Bit Score: 66; Significance: 2e-29; HSPs: 1)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 150 - 223
Target Start/End: Original strand, 15061 - 15134
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  15061 aaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcc 15134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0365 (Bit Score: 66; Significance: 2e-29; HSPs: 1)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 150 - 223
Target Start/End: Original strand, 15704 - 15777
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  15704 aaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcc 15777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 66; Significance: 2e-29; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 150 - 223
Target Start/End: Original strand, 7506926 - 7506999
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  7506926 aaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcc 7506999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 150 - 223
Target Start/End: Original strand, 24501840 - 24501913
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  24501840 aaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcc 24501913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 150 - 223
Target Start/End: Original strand, 10392264 - 10392337
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    ||||| |||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  10392264 aaagattttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcc 10392337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 150 - 223
Target Start/End: Original strand, 26374457 - 26374530
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||||||||| ||||||||||||||||    
T  26374457 aaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatcttatttattaaacaatcc 26374530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 150 - 223
Target Start/End: Complemental strand, 42937530 - 42937457
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    ||||||||||| |||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  42937530 aaagactttttaatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcc 42937457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 150 - 223
Target Start/End: Original strand, 42938144 - 42938217
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    ||||||||||||| |||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  42938144 aaagactttttcaggctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcc 42938217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 149 - 221
Target Start/End: Original strand, 5576646 - 5576718
Alignment:
Q  149 aaaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaat 221  Q
    ||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| |||||||||||||    
T  5576646 aaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctggtttattaaacaat 5576718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 150 - 221
Target Start/End: Original strand, 42735304 - 42735375
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaat 221  Q
    ||||||||||||| |||||||||||||| || ||||||||||||||||||||||||||||||||||||||||    
T  42735304 aaagactttttcaagctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 42735375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 150 - 223
Target Start/End: Original strand, 23115196 - 23115269
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    |||||||||||||||| ||||||||| | || ||||||||||||||||||||||||||||||||||||||||||    
T  23115196 aaagactttttcatgccaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcc 23115269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 150 - 222
Target Start/End: Original strand, 2704846 - 2704918
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatc 222  Q
    |||||||||||||||||||||| ||||| || ||||||||||||||||||||||| |||||||||||||||||    
T  2704846 aaagactttttcatgctaaaatatcactagaaaatcccacaaaatccatcaaaatttgatttattaaacaatc 2704918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 156 - 222
Target Start/End: Original strand, 4950049 - 4950115
Alignment:
Q  156 tttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatc 222  Q
    |||||||||||||||||||||| || ||| ||||||| ||||||||||||| |||||||||| ||||    
T  4950049 tttttcatgctaaaatttcactagaaaattccacaaattccatcaaaatctaatttattaaataatc 4950115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 150 - 223
Target Start/End: Original strand, 14782162 - 14782235
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    |||||||||||| || ||||||| ||||  | ||||||||||||||||||||||||  ||||||||||||||||    
T  14782162 aaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatcc 14782235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 150 - 223
Target Start/End: Original strand, 44725837 - 44725910
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    |||||||||||| || ||||||| ||||  | ||||||||||||||||||||||||  ||||||||||||||||    
T  44725837 aaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatcc 44725910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 150 - 221
Target Start/End: Complemental strand, 26856246 - 26856175
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaat 221  Q
    |||||||||||| || ||||||| ||||  | ||||||||||||||||||||||||  ||||||||||||||    
T  26856246 aaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaat 26856175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 150 - 223
Target Start/End: Complemental strand, 4403286 - 4403213
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    |||||||||||| || ||||||| ||||  | |||||||||||||||||||||| |  ||||||||||||||||    
T  4403286 aaagactttttcttgttaaaattacactaaaaaatcccacaaaatccatcaaaacccaatttattaaacaatcc 4403213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 150 - 223
Target Start/End: Original strand, 9288484 - 9288557
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    |||||||||||| || ||||||| ||||  | ||||||||||||| ||||||||||  ||||||||||||||||    
T  9288484 aaagactttttcttgttaaaattacactacaaaatcccacaaaattcatcaaaatccaatttattaaacaatcc 9288557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 150 - 223
Target Start/End: Original strand, 18958754 - 18958827
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    |||||||||||| || ||||||| ||||  | ||||||||||||||||| ||||||  ||||||||||||||||    
T  18958754 aaagactttttcttgttaaaattacactacaaaatcccacaaaatccattaaaatccaatttattaaacaatcc 18958827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 150 - 222
Target Start/End: Complemental strand, 43959826 - 43959764
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatc 222  Q
    |||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||||    
T  43959826 aaagactttttcatgctaaaatttcac----------cacaaaatccatcaaaatctgatttattaaacaatc 43959764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 149 - 221
Target Start/End: Original strand, 19717907 - 19717979
Alignment:
Q  149 aaaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaat 221  Q
    ||||||||||||| || ||||||| ||||  | ||||||||||||||||| ||||||  ||||||||||||||    
T  19717907 aaaagactttttcttgttaaaattacactacaaaatcccacaaaatccattaaaatccaatttattaaacaat 19717979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 150 - 223
Target Start/End: Original strand, 10295407 - 10295481
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaa-tccatcaaaatctgatttattaaacaatcc 223  Q
    |||||||||||| || ||||||| ||||  | |||||||||||| ||||||||||||  ||||||||||||||||    
T  10295407 aaagactttttcttgttaaaattacactacaaaatcccacaaaaatccatcaaaatccaatttattaaacaatcc 10295481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 149 - 223
Target Start/End: Original strand, 13478276 - 13478350
Alignment:
Q  149 aaaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    |||||||||| ||||||||||||||  ||  | ||||| |||||||||| | |||||| ||||||||||||||||    
T  13478276 aaaagactttatcatgctaaaatttagctaaaaaatcctacaaaatccaacgaaatctaatttattaaacaatcc 13478350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 223
Target Start/End: Original strand, 43166749 - 43166790
Alignment:
Q  182 aatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    ||||||||||||||||||||||||  ||||||||||||||||    
T  43166749 aatcccacaaaatccatcaaaatccaatttattaaacaatcc 43166790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 223
Target Start/End: Original strand, 39467495 - 39467568
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    ||||| |||||| || ||||||| ||||  | ||||||| |||||||||||||||   ||||||||||||||||    
T  39467495 aaagattttttcttgttaaaattacactacaaaatcccataaaatccatcaaaattcaatttattaaacaatcc 39467568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 195
Target Start/End: Complemental strand, 41479266 - 41479221
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatc 195  Q
    ||||| |||||||||||||||||| ||| || ||||||||||||||    
T  41479266 aaagattttttcatgctaaaattttactagaaaatcccacaaaatc 41479221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 223
Target Start/End: Original strand, 8410423 - 8410498
Alignment:
Q  150 aaagactttttcatgctaaaatttcact--ggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    ||||||||| |||| |||||||||||||    | ||||||||||||||||||||| ||  ||||| ||||||||||    
T  8410423 aaagactttgtcatactaaaatttcactaaaaaaaatcccacaaaatccatcaaagtccaatttagtaaacaatcc 8410498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 66; Significance: 2e-29; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 150 - 223
Target Start/End: Complemental strand, 34695453 - 34695380
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  34695453 aaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcc 34695380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 150 - 223
Target Start/End: Original strand, 43581117 - 43581190
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  43581117 aaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcc 43581190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 150 - 223
Target Start/End: Original strand, 44343423 - 44343496
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  44343423 aaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcc 44343496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 150 - 222
Target Start/End: Original strand, 7719287 - 7719359
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatc 222  Q
    |||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||    
T  7719287 aaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatc 7719359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 151 - 223
Target Start/End: Original strand, 32142945 - 32143017
Alignment:
Q  151 aagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    ||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  32142945 aagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcc 32143017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 150 - 222
Target Start/End: Original strand, 39219404 - 39219476
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatc 222  Q
    |||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||    
T  39219404 aaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatc 39219476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 152 - 223
Target Start/End: Complemental strand, 43679592 - 43679521
Alignment:
Q  152 agactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    |||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  43679592 agactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcc 43679521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 150 - 220
Target Start/End: Original strand, 18914762 - 18914832
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaa 220  Q
    |||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||    
T  18914762 aaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaa 18914832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 150 - 223
Target Start/End: Complemental strand, 973364 - 973291
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    |||||||||||| ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  973364 aaagactttttcttgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcc 973291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 150 - 223
Target Start/End: Original strand, 7718389 - 7718462
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    ||||| |||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  7718389 aaagattttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcc 7718462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 150 - 223
Target Start/End: Complemental strand, 30440976 - 30440903
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    |||||||||||||| ||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  30440976 aaagactttttcatactaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcc 30440903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 150 - 223
Target Start/End: Original strand, 40996676 - 40996749
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    |||||||||||||||||||||||||||| || ||||| ||||||||||||||||||||||||||||||||||||    
T  40996676 aaagactttttcatgctaaaatttcactagaaaatcctacaaaatccatcaaaatctgatttattaaacaatcc 40996749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 150 - 223
Target Start/End: Complemental strand, 47879348 - 47879275
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    |||||||||||||||||||||||||||| || ||| ||||||||||||||||||||||||||||||||||||||    
T  47879348 aaagactttttcatgctaaaatttcactagaaaattccacaaaatccatcaaaatctgatttattaaacaatcc 47879275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 150 - 223
Target Start/End: Complemental strand, 47914446 - 47914373
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||||||||| ||||||||||||||||    
T  47914446 aaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatcttatttattaaacaatcc 47914373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 150 - 221
Target Start/End: Complemental strand, 12893588 - 12893517
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaat 221  Q
    |||||||||||||||||||||||||||| || |||| |||||||||||||||||||||||||||||||||||    
T  12893588 aaagactttttcatgctaaaatttcactagaaaatctcacaaaatccatcaaaatctgatttattaaacaat 12893517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 152 - 223
Target Start/End: Original strand, 20275292 - 20275363
Alignment:
Q  152 agactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    ||||||||||||||||||||||||||  | ||||||||||||||||||||||||||||||||||||||||||    
T  20275292 agactttttcatgctaaaatttcactaaaaaatcccacaaaatccatcaaaatctgatttattaaacaatcc 20275363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 148 - 223
Target Start/End: Complemental strand, 12963876 - 12963801
Alignment:
Q  148 aaaaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    |||||||||||||| | ||||||||||||| || ||||||||||||||||||||||||| ||||||||||||||||    
T  12963876 aaaaagactttttcttactaaaatttcactagaaaatcccacaaaatccatcaaaatctaatttattaaacaatcc 12963801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 150 - 223
Target Start/End: Complemental strand, 7113632 - 7113559
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    ||||||||||||||||||||||||  || || |||||||||||||| |||||||||||||||||||||||||||    
T  7113632 aaagactttttcatgctaaaattttcctagaaaatcccacaaaatctatcaaaatctgatttattaaacaatcc 7113559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 154 - 223
Target Start/End: Complemental strand, 10068636 - 10068567
Alignment:
Q  154 actttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    |||||||||||||||||||||||| || ||||||||||||||||||||||| | ||||||||||||||||    
T  10068636 actttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatttaatttattaaacaatcc 10068567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 150 - 223
Target Start/End: Complemental strand, 34009193 - 34009120
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    ||||||||||| |||||||||||| | | || ||| ||||||||||||||||||||||||||||||||||||||    
T  34009193 aaagacttttttatgctaaaattttattagaaaattccacaaaatccatcaaaatctgatttattaaacaatcc 34009120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 149 - 223
Target Start/End: Complemental strand, 33382811 - 33382737
Alignment:
Q  149 aaaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    ||||||||||||| || ||||||| ||||  | ||||||||||||||||||||||||  ||||||||||||||||    
T  33382811 aaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatcc 33382737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 150 - 223
Target Start/End: Complemental strand, 23101471 - 23101398
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    |||||||||||| || ||||||| ||||  | ||||||||||||||||||||||||  ||||||||||||||||    
T  23101471 aaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatcc 23101398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 150 - 223
Target Start/End: Complemental strand, 28342520 - 28342447
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    |||||||||||| || ||||||| ||||  | ||||||||||||||||||||||||  ||||||||||||||||    
T  28342520 aaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatcc 28342447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 150 - 223
Target Start/End: Original strand, 29614791 - 29614864
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    |||||||||||| || ||||||| ||||  | ||||||||||||||||||||||||  ||||||||||||||||    
T  29614791 aaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatcc 29614864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 150 - 223
Target Start/End: Complemental strand, 39784272 - 39784199
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    |||||||||||| || ||||||| ||||  | ||||||||||||||||||||||||  ||||||||||||||||    
T  39784272 aaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatcc 39784199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 150 - 221
Target Start/End: Original strand, 43187384 - 43187455
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaat 221  Q
    |||||||||||| || |||||||||||| || ||||| ||||||| ||||||||||  ||||||||||||||    
T  43187384 aaagactttttcttgttaaaatttcactagaaaatccgacaaaattcatcaaaatccaatttattaaacaat 43187455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 149 - 223
Target Start/End: Complemental strand, 8675507 - 8675433
Alignment:
Q  149 aaaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    |||||| |||||| || ||||||| ||||  | ||||||||||||||||||||||||  ||||||||||||||||    
T  8675507 aaaagattttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatcc 8675433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 153 - 223
Target Start/End: Complemental strand, 25805862 - 25805792
Alignment:
Q  153 gactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    ||||||||||||||||||||| | | || ||||||||||||||||||| |||   ||||||||||||||||    
T  25805862 gactttttcatgctaaaattttattagaaaatcccacaaaatccatcataattcaatttattaaacaatcc 25805792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 150 - 195
Target Start/End: Complemental strand, 727683 - 727638
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatc 195  Q
    |||||||||||||||||||||||||||| || ||||||||||||||    
T  727683 aaagactttttcatgctaaaatttcactagaaaatcccacaaaatc 727638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 154 - 223
Target Start/End: Complemental strand, 3023095 - 3023026
Alignment:
Q  154 actttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    |||||||| || ||||||| ||||  | ||||||||||||||||||||||||  ||||||||||||||||    
T  3023095 actttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatcc 3023026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 150 - 223
Target Start/End: Original strand, 28034832 - 28034905
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    |||||||||||  || ||||||| ||||  | ||||||||||||||||||||||||  ||||||||||||||||    
T  28034832 aaagacttttttttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatcc 28034905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 150 - 223
Target Start/End: Complemental strand, 41827477 - 41827404
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    |||||| ||||| || ||||||| ||||  | ||||||||||||||||||||||||  ||||||||||||||||    
T  41827477 aaagacattttcttgttaaaattacactacacaatcccacaaaatccatcaaaatccaatttattaaacaatcc 41827404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 150 - 222
Target Start/End: Original strand, 9882263 - 9882335
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatc 222  Q
    |||||||||||| |  ||||||| ||||  | ||||||||||||||||||||||||  |||||||||||||||    
T  9882263 aaagactttttcttcttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatc 9882335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 154 - 222
Target Start/End: Complemental strand, 18838558 - 18838490
Alignment:
Q  154 actttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatc 222  Q
    |||||||| || ||||||| ||||  | ||||||||||||||||||||||||  |||||||||||||||    
T  18838558 actttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatc 18838490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 223
Target Start/End: Complemental strand, 7993315 - 7993242
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    |||||||||||| || ||||||| ||||  | ||||||||| |||||||||||||   ||||||||||||||||    
T  7993315 aaagactttttcttgttaaaattacactacaaaatcccacacaatccatcaaaattcaatttattaaacaatcc 7993242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 223
Target Start/End: Complemental strand, 31639015 - 31638982
Alignment:
Q  190 aaaatccatcaaaatctgatttattaaacaatcc 223  Q
    ||||||||||||||||||||||||||||||||||    
T  31639015 aaaatccatcaaaatctgatttattaaacaatcc 31638982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 223
Target Start/End: Original strand, 37972894 - 37972967
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    |||||||||||| || ||||||| ||||  | |||||| |||||||||||||||||  |||||||||| |||||    
T  37972894 aaagactttttcttgttaaaattacactataaaatcccgcaaaatccatcaaaatccaatttattaaataatcc 37972967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 165 - 217
Target Start/End: Complemental strand, 10617076 - 10617024
Alignment:
Q  165 ctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaa 217  Q
    ||||||| ||||| || |||| |||||||||||||||||||| ||||||||||    
T  10617076 ctaaaatatcactagaaaatctcacaaaatccatcaaaatctaatttattaaa 10617024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 188
Target Start/End: Original strand, 3797092 - 3797131
Alignment:
Q  149 aaaagactttttcatgctaaaatttcactggataatccca 188  Q
    ||||||||||||||||||||||||||||| || |||||||    
T  3797092 aaaagactttttcatgctaaaatttcactagaaaatccca 3797131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 150 - 197
Target Start/End: Complemental strand, 9180043 - 9179996
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatcca 197  Q
    ||||||||||| ||||||||| |||||| || ||||||||||||||||    
T  9180043 aaagacttttttatgctaaaaattcactagaaaatcccacaaaatcca 9179996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 148 - 221
Target Start/End: Original strand, 1470259 - 1470331
Alignment:
Q  148 aaaaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaat 221  Q
    ||||||| |||||||||||||||||| |   || |||||||||||| | |||||||||| ||| ||||||||||    
T  1470259 aaaaagattttttcatgctaaaattttatcagaaaatcccacaaaa-ctatcaaaatctaattcattaaacaat 1470331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 223
Target Start/End: Complemental strand, 12740545 - 12740473
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    ||||||||| || || ||||||| ||||  | |||||||||||||| |||||||||  ||||||||||||||||    
T  12740545 aaagactttctcttgttaaaattacactataaaatcccacaaaatctatcaaaatc-catttattaaacaatcc 12740473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 222
Target Start/End: Original strand, 44256797 - 44256865
Alignment:
Q  154 actttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatc 222  Q
    |||||||| || ||||||| ||||| | ||||| ||||||| |||| |||||  |||||||||||||||    
T  44256797 actttttcttgttaaaattacactgcaaaatccaacaaaattcatccaaatccaatttattaaacaatc 44256865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 222
Target Start/End: Original strand, 46405494 - 46405530
Alignment:
Q  186 ccacaaaatccatcaaaatctgatttattaaacaatc 222  Q
    ||||||||||||||||||||  |||||||||||||||    
T  46405494 ccacaaaatccatcaaaatccaatttattaaacaatc 46405530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 66; Significance: 2e-29; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 150 - 223
Target Start/End: Original strand, 6197505 - 6197578
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  6197505 aaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcc 6197578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 150 - 223
Target Start/End: Complemental strand, 1391802 - 1391729
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    |||||||||||||||| ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  1391802 aaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcc 1391729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 150 - 223
Target Start/End: Original strand, 2300765 - 2300838
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||||||||| ||||||||||||||||    
T  2300765 aaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatcttatttattaaacaatcc 2300838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 150 - 223
Target Start/End: Complemental strand, 28002843 - 28002770
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    |||||||||||||||||||||||||||| || |||  |||||||||||||||||||||||||||||||||||||    
T  28002843 aaagactttttcatgctaaaatttcactagaaaatttcacaaaatccatcaaaatctgatttattaaacaatcc 28002770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 150 - 223
Target Start/End: Complemental strand, 29076777 - 29076704
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    ||||| |||||||||||||||||||||| || ||||| | ||||||||||||||||||||||||||||||||||    
T  29076777 aaagattttttcatgctaaaatttcactagaaaatcctataaaatccatcaaaatctgatttattaaacaatcc 29076704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 150 - 223
Target Start/End: Complemental strand, 29111751 - 29111678
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    ||||| |||||||||||||||||||||| || ||||| | ||||||||||||||||||||||||||||||||||    
T  29111751 aaagattttttcatgctaaaatttcactagaaaatcctataaaatccatcaaaatctgatttattaaacaatcc 29111678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 154 - 223
Target Start/End: Complemental strand, 7052019 - 7051950
Alignment:
Q  154 actttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    |||||||||||||||||||| ||| || ||||| ||||||||||||||||||  ||||||||||||||||    
T  7052019 actttttcatgctaaaattttactagaaaatcctacaaaatccatcaaaatccaatttattaaacaatcc 7051950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 150 - 223
Target Start/End: Complemental strand, 31895874 - 31895801
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    |||||||||||| || ||||||| |||| || ||||||||||||||||||||||||  ||||||||||||||||    
T  31895874 aaagactttttcttgttaaaattacactagaaaatcccacaaaatccatcaaaatccaatttattaaacaatcc 31895801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 150 - 223
Target Start/End: Complemental strand, 34773587 - 34773514
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    |||||||||||| || ||||||| ||||| | ||||||||||||||||||||||||  ||||||||||||||||    
T  34773587 aaagactttttcttgttaaaattacactgcaaaatcccacaaaatccatcaaaatccaatttattaaacaatcc 34773514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 150 - 223
Target Start/End: Original strand, 14262460 - 14262533
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    |||||||||||| || ||||||| ||||  | ||||||||||||||||||||||||  ||||||||||||||||    
T  14262460 aaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatcc 14262533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 150 - 223
Target Start/End: Original strand, 34759077 - 34759150
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    ||||| |||||| || ||||||| ||||  | ||||||||||||||||||||||||  ||||||||||||||||    
T  34759077 aaagattttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatcc 34759150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 217
Target Start/End: Complemental strand, 657122 - 657065
Alignment:
Q  157 ttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaa 217  Q
    |||||||| ||||||||||||    ||||||||||||||||||| |||| |||||||||||    
T  657122 ttttcatgataaaatttcacta---aatcccacaaaatccatcagaatcagatttattaaa 657065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 219
Target Start/End: Complemental strand, 7497253 - 7497185
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaaca 219  Q
    |||||||||||| || ||||||| ||||  | ||||| ||||||||||||||||||  ||||||||||||    
T  7497253 aaagactttttcttgttaaaattacactacaaaatcc-acaaaatccatcaaaatccaatttattaaaca 7497185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 66; Significance: 2e-29; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 150 - 223
Target Start/End: Original strand, 7016766 - 7016839
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  7016766 aaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcc 7016839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 150 - 223
Target Start/End: Complemental strand, 21147246 - 21147173
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  21147246 aaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcc 21147173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 150 - 223
Target Start/End: Original strand, 33656068 - 33656141
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  33656068 aaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcc 33656141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 150 - 222
Target Start/End: Original strand, 5272946 - 5273018
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatc 222  Q
    |||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||    
T  5272946 aaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatc 5273018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 150 - 223
Target Start/End: Complemental strand, 849326 - 849253
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    |||||||||||||||||||||||||||| || |||||||||||||| |||||||||||||||||||||||||||    
T  849326 aaagactttttcatgctaaaatttcactagaaaatcccacaaaatctatcaaaatctgatttattaaacaatcc 849253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 156 - 223
Target Start/End: Original strand, 27458983 - 27459050
Alignment:
Q  156 tttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    |||||||||||||||||||||| || ||||||||||||||||||||||||| ||||||||||||||||    
T  27458983 tttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctaatttattaaacaatcc 27459050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 150 - 223
Target Start/End: Complemental strand, 139452 - 139379
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    ||||||||||||||  ||||||||||||||| ||||| |||||||||||||||||||| |||||||||||||||    
T  139452 aaagactttttcatattaaaatttcactggaaaatccaacaaaatccatcaaaatctggtttattaaacaatcc 139379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 156 - 220
Target Start/End: Complemental strand, 6460965 - 6460901
Alignment:
Q  156 tttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaa 220  Q
    ||||||||| |||||||||||| || |||||| ||||||||||||||||||||||||||||||||    
T  6460965 tttttcatgataaaatttcactagaaaatccctcaaaatccatcaaaatctgatttattaaacaa 6460901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 156 - 223
Target Start/End: Original strand, 32157930 - 32157997
Alignment:
Q  156 tttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    |||||| ||||||||||| ||| || ||||||||||||||| ||||||||| ||||||||||||||||    
T  32157930 tttttcgtgctaaaattttactagaaaatcccacaaaatccgtcaaaatctaatttattaaacaatcc 32157997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 149 - 223
Target Start/End: Original strand, 1152129 - 1152203
Alignment:
Q  149 aaaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    ||||||||||||| || ||||||| ||||  | ||||||||||||||||||||||||  ||||||||||||||||    
T  1152129 aaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatcc 1152203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 150 - 223
Target Start/End: Complemental strand, 13926110 - 13926037
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    |||||||||||| || ||||||| ||||  | ||||||||||||||||||||||||  ||||||||||||||||    
T  13926110 aaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatcc 13926037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 150 - 223
Target Start/End: Original strand, 14000132 - 14000205
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    |||||||||||| || ||||||| ||||  | ||||||||||||||||||||||||  ||||||||||||||||    
T  14000132 aaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatcc 14000205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 150 - 223
Target Start/End: Original strand, 7947600 - 7947673
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    |||||||||||| || ||||||| ||||  | ||| ||||||||||||||||||||  ||||||||||||||||    
T  7947600 aaagactttttcttgttaaaattacactacaaaattccacaaaatccatcaaaatccaatttattaaacaatcc 7947673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 223
Target Start/End: Original strand, 4550284 - 4550357
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    ||||||| |||| || ||||||| ||||  | ||| ||||||||||||||||||||  ||||||||||||||||    
T  4550284 aaagactctttcttgttaaaattacactacaaaattccacaaaatccatcaaaatccaatttattaaacaatcc 4550357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 223
Target Start/End: Complemental strand, 39852524 - 39852451
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    |||||||||||| || ||||||| ||||  | ||||||| ||||||||||||||||  ||||| ||||||||||    
T  39852524 aaagactttttcttgttaaaattacactacaaaatcccataaaatccatcaaaatccaatttagtaaacaatcc 39852451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 222
Target Start/End: Complemental strand, 9689836 - 9689764
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatc 222  Q
    ||||||||||||||  |||||||| ||  || |||| |||| ||||||||||||||| |||||| ||||||||    
T  9689836 aaagactttttcataataaaattttacaagaaaatctcacacaatccatcaaaatctaatttatcaaacaatc 9689764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 162 - 222
Target Start/End: Original strand, 14465266 - 14465326
Alignment:
Q  162 atgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatc 222  Q
    |||||||||| | ||| || ||| ||||||||| |||||||||| ||||||||||||||||    
T  14465266 atgctaaaatattactagaaaattccacaaaattcatcaaaatccgatttattaaacaatc 14465326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 66; Significance: 2e-29; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 150 - 223
Target Start/End: Complemental strand, 1044985 - 1044912
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  1044985 aaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcc 1044912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 150 - 223
Target Start/End: Complemental strand, 25331309 - 25331236
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  25331309 aaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcc 25331236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 150 - 223
Target Start/End: Original strand, 41881110 - 41881183
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  41881110 aaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcc 41881183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 152 - 223
Target Start/End: Original strand, 7249795 - 7249866
Alignment:
Q  152 agactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    |||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  7249795 agactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcc 7249866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 150 - 223
Target Start/End: Complemental strand, 55303021 - 55302948
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    |||||||||||||||||||||||||||| || |||||||||| |||||||||||||||||||||||||||||||    
T  55303021 aaagactttttcatgctaaaatttcactagaaaatcccacaatatccatcaaaatctgatttattaaacaatcc 55302948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 150 - 222
Target Start/End: Original strand, 30009705 - 30009777
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatc 222  Q
    |||||||||||||||||||||||| ||| || |||||||||||||||||||||||||||||||||||||||||    
T  30009705 aaagactttttcatgctaaaattttactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatc 30009777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 150 - 222
Target Start/End: Original strand, 34228611 - 34228683
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatc 222  Q
    |||||||||||||||||||||||||||| || ||||| |||||||||||||||||||||||||||||||||||    
T  34228611 aaagactttttcatgctaaaatttcactagaaaatcctacaaaatccatcaaaatctgatttattaaacaatc 34228683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 151 - 222
Target Start/End: Complemental strand, 25446227 - 25446156
Alignment:
Q  151 aagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatc 222  Q
    |||||||||||||||||||||||||||  | |||||||||||||||||||||||||||||||||||||||||    
T  25446227 aagactttttcatgctaaaatttcactaaaaaatcccacaaaatccatcaaaatctgatttattaaacaatc 25446156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 150 - 221
Target Start/End: Original strand, 39479383 - 39479454
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaat 221  Q
    |||||||||||| ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||    
T  39479383 aaagactttttcctgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 39479454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 152 - 222
Target Start/End: Complemental strand, 28541874 - 28541804
Alignment:
Q  152 agactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatc 222  Q
    |||||||||||||||||||||||||| || ||| |||||||||||||||||||||||||||||||||||||    
T  28541874 agactttttcatgctaaaatttcactagaaaattccacaaaatccatcaaaatctgatttattaaacaatc 28541804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 150 - 223
Target Start/End: Complemental strand, 12113123 - 12113050
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    |||||||||||||||||||||||||||| || ||| ||||||||||||| ||||||||||||||||||||||||    
T  12113123 aaagactttttcatgctaaaatttcactagaaaattccacaaaatccattaaaatctgatttattaaacaatcc 12113050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 150 - 223
Target Start/End: Original strand, 19740936 - 19741009
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    ||||||||||||| |||||||||||||| || ||||||||||||||||||||||||| ||||||||||||||||    
T  19740936 aaagactttttcaagctaaaatttcactagaaaatcccacaaaatccatcaaaatctaatttattaaacaatcc 19741009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 150 - 223
Target Start/End: Original strand, 32950864 - 32950937
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    ||||| |||||||||||||||||||||| || ||||||||||||| ||||||||||||||||||||||||||||    
T  32950864 aaagaatttttcatgctaaaatttcactagaaaatcccacaaaattcatcaaaatctgatttattaaacaatcc 32950937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 150 - 223
Target Start/End: Complemental strand, 41320988 - 41320915
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    |||||||||||||| ||||||||||||| ||  |||||||||||||||||||||||||||||||||||||||||    
T  41320988 aaagactttttcatactaaaatttcactagaacatcccacaaaatccatcaaaatctgatttattaaacaatcc 41320915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 150 - 222
Target Start/End: Complemental strand, 22202193 - 22202121
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatc 222  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||||||| | |||||||||||||||    
T  22202193 aaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaattttatttattaaacaatc 22202121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 157 - 223
Target Start/End: Complemental strand, 7007545 - 7007479
Alignment:
Q  157 ttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    ||||||||||||||||||||| || ||||||||||||| ||||||||||||||||||||||||||||    
T  7007545 ttttcatgctaaaatttcactagaaaatcccacaaaattcatcaaaatctgatttattaaacaatcc 7007479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 156 - 222
Target Start/End: Original strand, 24131016 - 24131082
Alignment:
Q  156 tttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatc 222  Q
    |||||||| ||||||||||||| || |||||||||||||||||||||||||||||||||||||||||    
T  24131016 tttttcatcctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatc 24131082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 150 - 223
Target Start/End: Original strand, 37046478 - 37046552
Alignment:
Q  150 aaagactttttcatgctaaaattt-cactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    |||||||||||||||||||||||| |||| || ||| ||||||||||||||||||||||||||||||||||||||    
T  37046478 aaagactttttcatgctaaaattttcactagaaaattccacaaaatccatcaaaatctgatttattaaacaatcc 37046552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 150 - 222
Target Start/End: Complemental strand, 1113071 - 1112999
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatc 222  Q
    ||||||||||||||| |||||||| ||| |  |||||||||||||||||||||||||||||||||||||||||    
T  1113071 aaagactttttcatgttaaaattttactaggaaatcccacaaaatccatcaaaatctgatttattaaacaatc 1112999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 154 - 223
Target Start/End: Complemental strand, 3436767 - 3436698
Alignment:
Q  154 actttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    ||||||||||| ||||||||||||  | ||||||||||||| ||||||||||||||||||||||||||||    
T  3436767 actttttcatgttaaaatttcactacaaaatcccacaaaattcatcaaaatctgatttattaaacaatcc 3436698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 150 - 223
Target Start/End: Complemental strand, 42786862 - 42786789
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    ||||||||||| ||| |||||||||||| || ||| ||||||||||||||||||| ||||||||||||||||||    
T  42786862 aaagacttttttatgataaaatttcactagaaaattccacaaaatccatcaaaatatgatttattaaacaatcc 42786789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 150 - 223
Target Start/End: Complemental strand, 53276017 - 53275944
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    |||||||||||||||||||||||| | | || |||| ||||||||||||||||||||||||||||| |||||||    
T  53276017 aaagactttttcatgctaaaattttattagaaaatctcacaaaatccatcaaaatctgatttattacacaatcc 53275944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 150 - 222
Target Start/End: Original strand, 27454106 - 27454178
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatc 222  Q
    |||||||||||||||| ||||||||||| || ||| ||||||||| |||||||||||||||||||||| ||||    
T  27454106 aaagactttttcatgccaaaatttcactagaaaattccacaaaattcatcaaaatctgatttattaaataatc 27454178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 159 - 223
Target Start/End: Complemental strand, 9163245 - 9163181
Alignment:
Q  159 ttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    ||||||||||||||||||| || ||| ||||||||||||||||||| | ||||||||||||||||    
T  9163245 ttcatgctaaaatttcactagaaaattccacaaaatccatcaaaatttaatttattaaacaatcc 9163181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 150 - 216
Target Start/End: Complemental strand, 8712044 - 8711978
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaa 216  Q
    |||||||||||| |||||||||||||||  | ||||||||||||||||||||||||  |||||||||    
T  8712044 aaagactttttcttgctaaaatttcactataaaatcccacaaaatccatcaaaatccaatttattaa 8711978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 150 - 223
Target Start/End: Complemental strand, 5441582 - 5441509
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    |||||||||||| || ||||||| ||||  | ||||||||||||||||||||||||  ||||||||||||||||    
T  5441582 aaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatcc 5441509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 166 - 223
Target Start/End: Complemental strand, 23465117 - 23465060
Alignment:
Q  166 taaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    |||||||| ||| || ||||||||||||||||||||| ||||||||||||||||||||    
T  23465117 taaaatttaactagaaaatcccacaaaatccatcaaattctgatttattaaacaatcc 23465060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 182 - 223
Target Start/End: Original strand, 25504699 - 25504740
Alignment:
Q  182 aatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  25504699 aatcccacaaaatccatcaaaatctgatttattaaacaatcc 25504740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 150 - 223
Target Start/End: Complemental strand, 27768234 - 27768161
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    |||||||||||| || ||||||| ||||  | ||||||||||||||||||||||||  ||||||||||||||||    
T  27768234 aaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatcc 27768161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 150 - 223
Target Start/End: Original strand, 44770881 - 44770954
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    |||||||||||| |  |||||||||||| || |||||||||||||||| |||||||  ||||||||||||||||    
T  44770881 aaagactttttcttcttaaaatttcactagaaaatcccacaaaatccaccaaaatccaatttattaaacaatcc 44770954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 150 - 223
Target Start/End: Complemental strand, 54341322 - 54341249
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    |||||||||||| || ||||||| ||||  | ||||||||||||||||||||||||  ||||||||||||||||    
T  54341322 aaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatcc 54341249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 150 - 195
Target Start/End: Original strand, 31314770 - 31314815
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatc 195  Q
    |||||||||||||||||||||||||||| || ||||||||||||||    
T  31314770 aaagactttttcatgctaaaatttcactagaaaatcccacaaaatc 31314815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 150 - 223
Target Start/End: Original strand, 37828430 - 37828503
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    |||||||||||| |  ||||||| ||||  | ||||||||||||||||||||||||  ||||||||||||||||    
T  37828430 aaagactttttctttttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatcc 37828503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 150 - 223
Target Start/End: Complemental strand, 48261305 - 48261232
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    ||||| |||||| || ||||||| ||||  | ||||||||||||||||||||||||  ||||||||||||||||    
T  48261305 aaagattttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatcc 48261232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 150 - 223
Target Start/End: Original strand, 54853496 - 54853569
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    ||||| |||||| || ||||||| ||||  | ||||||||||||||||||||||||  ||||||||||||||||    
T  54853496 aaagattttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatcc 54853569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 150 - 216
Target Start/End: Complemental strand, 24736513 - 24736447
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaa 216  Q
    |||||||| ||| || |||||||||||| || |||| |||||||||||||||||||  |||||||||    
T  24736513 aaagacttcttcttgttaaaatttcactagaaaatctcacaaaatccatcaaaatccaatttattaa 24736447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 153 - 223
Target Start/End: Complemental strand, 37916002 - 37915932
Alignment:
Q  153 gactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    ||||||||| || ||||| | ||||  | ||||||||||||||||||||||||  ||||||||||||||||    
T  37916002 gactttttcttgttaaaagtacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatcc 37915932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 150 - 223
Target Start/End: Original strand, 46635676 - 46635743
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    ||||||||||||||||||||||||||||  | ||||||||||||||      ||||| ||||||||||||||||    
T  46635676 aaagactttttcatgctaaaatttcactaaaaaatcccacaaaatc------aatcttatttattaaacaatcc 46635743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 154 - 203
Target Start/End: Original strand, 39307285 - 39307334
Alignment:
Q  154 actttttcatgctaaaatttcactggataatcccacaaaatccatcaaaa 203  Q
    ||||||||||| |||||||||||| || ||||||||||||| ||||||||    
T  39307285 actttttcatgttaaaatttcactagaaaatcccacaaaattcatcaaaa 39307334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 222
Target Start/End: Original strand, 40537188 - 40537250
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatc 222  Q
    |||||||||||||||||||||||||||          ||||||||||||||||||| ||||||||||||||||    
T  40537188 aaagactttttcatgctaaaatttcac----------cacaaaatccatcaaaatcagatttattaaacaatc 40537250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 150 - 197
Target Start/End: Complemental strand, 11090482 - 11090435
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatcca 197  Q
    ||||||||||| ||||||||||||||||  | ||||||||||||||||    
T  11090482 aaagactttttaatgctaaaatttcactaaaaaatcccacaaaatcca 11090435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 188 - 223
Target Start/End: Complemental strand, 23987354 - 23987319
Alignment:
Q  188 acaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    ||||||||||||||||||| ||||||||||||||||    
T  23987354 acaaaatccatcaaaatctaatttattaaacaatcc 23987319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 150 - 197
Target Start/End: Original strand, 56445383 - 56445430
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatcca 197  Q
    |||||||||||| ||||||| ||||||| || ||||||||||||||||    
T  56445383 aaagactttttcttgctaaagtttcactagaaaatcccacaaaatcca 56445430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 223
Target Start/End: Complemental strand, 20021479 - 20021438
Alignment:
Q  182 aatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    ||||||| |||||||| |||||||| ||||||||||||||||    
T  20021479 aatcccataaaatccagcaaaatctaatttattaaacaatcc 20021438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 166 - 223
Target Start/End: Complemental strand, 28371086 - 28371029
Alignment:
Q  166 taaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    |||||||||||| || ||||||||||||| || ||||||   ||||||||||||||||    
T  28371086 taaaatttcactagaaaatcccacaaaattcaccaaaattcaatttattaaacaatcc 28371029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 223
Target Start/End: Complemental strand, 32322237 - 32322196
Alignment:
Q  182 aatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    |||||||||||||||||||||||   ||||||||||||||||    
T  32322237 aatcccacaaaatccatcaaaattcaatttattaaacaatcc 32322196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 223
Target Start/End: Complemental strand, 51321095 - 51321026
Alignment:
Q  154 actttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    |||||||| || ||||||| ||||  | |||  |||||||||||||||||||  ||||||||||||||||    
T  51321095 actttttcttgttaaaattacactataaaattacacaaaatccatcaaaatccaatttattaaacaatcc 51321026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 222
Target Start/End: Original strand, 29649731 - 29649767
Alignment:
Q  186 ccacaaaatccatcaaaatctgatttattaaacaatc 222  Q
    ||||||||||||||||||||  |||||||||||||||    
T  29649731 ccacaaaatccatcaaaatccaatttattaaacaatc 29649767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 66; Significance: 2e-29; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 150 - 223
Target Start/End: Complemental strand, 20605416 - 20605343
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  20605416 aaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcc 20605343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 150 - 223
Target Start/End: Complemental strand, 24776535 - 24776462
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  24776535 aaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcc 24776462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 150 - 223
Target Start/End: Original strand, 31170654 - 31170727
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  31170654 aaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcc 31170727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 150 - 223
Target Start/End: Complemental strand, 1789622 - 1789549
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    |||||||||||||||||||||||||| | || ||||||||||||||||||||||||||||||||||||||||||    
T  1789622 aaagactttttcatgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcc 1789549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 150 - 223
Target Start/End: Original strand, 5093077 - 5093150
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    |||||||||||||||||||||||||| | || ||||||||||||||||||||||||||||||||||||||||||    
T  5093077 aaagactttttcatgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcc 5093150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 150 - 223
Target Start/End: Complemental strand, 12407560 - 12407487
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    ||||||||||||||| |||||||||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  12407560 aaagactttttcatggtaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcc 12407487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 150 - 223
Target Start/End: Original strand, 14198607 - 14198680
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    ||||| |||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  14198607 aaagaatttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcc 14198680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 150 - 223
Target Start/End: Complemental strand, 16269871 - 16269798
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    ||||||||||||||||||||||||||||  | ||||||||||||||||||||||||||||||||||||||||||    
T  16269871 aaagactttttcatgctaaaatttcactataaaatcccacaaaatccatcaaaatctgatttattaaacaatcc 16269798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 150 - 223
Target Start/End: Complemental strand, 32125433 - 32125360
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    |||||||||||||||||||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||    
T  32125433 aaagactttttcatgctaaaattttactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcc 32125360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 150 - 223
Target Start/End: Complemental strand, 35317242 - 35317169
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    |||||||||||||||||||||||||||| || ||| ||||||||||||||||||||||||||||||||||||||    
T  35317242 aaagactttttcatgctaaaatttcactagaaaattccacaaaatccatcaaaatctgatttattaaacaatcc 35317169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 152 - 223
Target Start/End: Complemental strand, 43847824 - 43847753
Alignment:
Q  152 agactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    |||||||||||||||||||||||||| || ||| ||||||||||||||||| ||||||||||||||||||||    
T  43847824 agactttttcatgctaaaatttcactagaaaattccacaaaatccatcaaattctgatttattaaacaatcc 43847753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 150 - 222
Target Start/End: Original strand, 305495 - 305567
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatc 222  Q
    |||||||||||||| ||||||||||||| || |||| ||||||||||||| ||||||||||||||||||||||    
T  305495 aaagactttttcattctaaaatttcactagaaaatctcacaaaatccatcgaaatctgatttattaaacaatc 305567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 150 - 223
Target Start/End: Complemental strand, 9120306 - 9120233
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    ||||| |||| ||| ||||||||||||| || ||||||||||||||||||||||||| ||||||||||||||||    
T  9120306 aaagatttttccatactaaaatttcactagaaaatcccacaaaatccatcaaaatctaatttattaaacaatcc 9120233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 154 - 222
Target Start/End: Original strand, 22551797 - 22551865
Alignment:
Q  154 actttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatc 222  Q
    |||||||||||||||||||||||| || ||||||||||||||||||||||| | ||||| |||||||||    
T  22551797 actttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatttaatttaataaacaatc 22551865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 162 - 222
Target Start/End: Complemental strand, 44765943 - 44765883
Alignment:
Q  162 atgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatc 222  Q
    |||||||||||||||| || ||||||||||||||||||||||||| |||||||||||||||    
T  44765943 atgctaaaatttcactagaaaatcccacaaaatccatcaaaatcttatttattaaacaatc 44765883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 150 - 223
Target Start/End: Complemental strand, 26788966 - 26788893
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    |||||||||||| || ||||||| ||||  | ||||||||||||||||||||||||  ||||||||||||||||    
T  26788966 aaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatcc 26788893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 150 - 223
Target Start/End: Complemental strand, 33135803 - 33135730
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    |||||||||||| || ||||||| ||||  | ||||||||||||||||||||||||  ||||||||||||||||    
T  33135803 aaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatcc 33135730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 150 - 222
Target Start/End: Complemental strand, 43078743 - 43078671
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatc 222  Q
    ||||||||||||||| ||||||| ||||  | ||||||||||||||||| ||||||  |||||||||||||||    
T  43078743 aaagactttttcatgttaaaattacactataaaatcccacaaaatccatgaaaatccaatttattaaacaatc 43078671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 150 - 223
Target Start/End: Complemental strand, 18177447 - 18177374
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    |||||||||||| || ||||||| ||||  | ||||||||||||||||||||||||  ||| ||||||||||||    
T  18177447 aaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaattaattaaacaatcc 18177374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 150 - 223
Target Start/End: Complemental strand, 28844735 - 28844662
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    |||||||||||| |  ||||||| ||||  | ||| ||||||||||||||||||||| ||||||||||||||||    
T  28844735 aaagactttttcttattaaaattacactacaaaattccacaaaatccatcaaaatctaatttattaaacaatcc 28844662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 154 - 222
Target Start/End: Complemental strand, 10657582 - 10657514
Alignment:
Q  154 actttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatc 222  Q
    |||||||| || ||||||| ||||  | ||||||||||||||||||||||||  |||||||||||||||    
T  10657582 actttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatc 10657514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 223
Target Start/End: Complemental strand, 25288307 - 25288266
Alignment:
Q  182 aatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    ||||||||||||| ||||||||||  ||||||||||||||||    
T  25288307 aatcccacaaaattcatcaaaatccaatttattaaacaatcc 25288266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 223
Target Start/End: Original strand, 28740349 - 28740386
Alignment:
Q  186 ccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    ||||||||||||||||||||  ||||||||||||||||    
T  28740349 ccacaaaatccatcaaaatccaatttattaaacaatcc 28740386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 66; Significance: 2e-29; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 150 - 223
Target Start/End: Original strand, 6304280 - 6304353
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  6304280 aaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcc 6304353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 150 - 223
Target Start/End: Original strand, 49198297 - 49198370
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  49198297 aaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcc 49198370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 150 - 223
Target Start/End: Original strand, 50192578 - 50192651
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  50192578 aaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcc 50192651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 150 - 222
Target Start/End: Complemental strand, 45536116 - 45536044
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatc 222  Q
    |||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||    
T  45536116 aaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatc 45536044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 150 - 223
Target Start/End: Original strand, 19451836 - 19451909
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||| ||||    
T  19451836 aaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacgatcc 19451909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 154 - 223
Target Start/End: Original strand, 45760041 - 45760110
Alignment:
Q  154 actttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    |||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  45760041 actttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcc 45760110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 150 - 223
Target Start/End: Complemental strand, 21222319 - 21222246
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    ||||||||||||||||||||||||||||  | ||||||||||||||||||||||||| ||||||||||||||||    
T  21222319 aaagactttttcatgctaaaatttcactaaaaaatcccacaaaatccatcaaaatcttatttattaaacaatcc 21222246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 149 - 222
Target Start/End: Original strand, 28824400 - 28824473
Alignment:
Q  149 aaaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatc 222  Q
    |||||||||||||||| ||||||||| || || |||||||||||||||||||||||||||||||||||||||||    
T  28824400 aaaagactttttcatgttaaaatttccctagaaaatcccacaaaatccatcaaaatctgatttattaaacaatc 28824473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 150 - 223
Target Start/End: Original strand, 31572225 - 31572298
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    |||||||||||||| |||||||||||||  | ||||||||||||||||||||||||||||||||||||||||||    
T  31572225 aaagactttttcatcctaaaatttcactataaaatcccacaaaatccatcaaaatctgatttattaaacaatcc 31572298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 150 - 223
Target Start/End: Complemental strand, 35279844 - 35279771
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    ||||||||||||||| | |||||||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  35279844 aaagactttttcatgttgaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcc 35279771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 150 - 223
Target Start/End: Original strand, 35679156 - 35679229
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    |||||||||||||||||||||||||||| || |||||||  |||||||||||||||||||||||||||||||||    
T  35679156 aaagactttttcatgctaaaatttcactagaaaatcccatcaaatccatcaaaatctgatttattaaacaatcc 35679229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 154 - 223
Target Start/End: Complemental strand, 47780879 - 47780810
Alignment:
Q  154 actttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    ||||||||||| |||||||||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  47780879 actttttcatgttaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcc 47780810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 150 - 223
Target Start/End: Complemental strand, 49418256 - 49418183
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    ||||| |||||||||||||||||||| | || ||||||||||||||||||||||||||||||||||||||||||    
T  49418256 aaagattttttcatgctaaaatttcaatagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcc 49418183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 151 - 222
Target Start/End: Complemental strand, 48524490 - 48524419
Alignment:
Q  151 aagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatc 222  Q
    |||||||||||||| |||||||||||| || |||||||||||||||||||||| ||||||||||||||||||    
T  48524490 aagactttttcatgttaaaatttcactagaaaatcccacaaaatccatcaaaaactgatttattaaacaatc 48524419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 150 - 223
Target Start/End: Original strand, 32588981 - 32589054
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    ||||||||||| |||||||||||||||| || |||| ||||||||||||||||||| |||||||||||||||||    
T  32588981 aaagacttttttatgctaaaatttcactagaaaatctcacaaaatccatcaaaatccgatttattaaacaatcc 32589054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 154 - 223
Target Start/End: Original strand, 47654383 - 47654452
Alignment:
Q  154 actttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    ||||||||||||||||||||| || || ||| ||||||||||||||||||||||||||||||||||||||    
T  47654383 actttttcatgctaaaatttccctagaaaattccacaaaatccatcaaaatctgatttattaaacaatcc 47654452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 157 - 221
Target Start/End: Complemental strand, 730314 - 730250
Alignment:
Q  157 ttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaat 221  Q
    ||||||||||||||||||||| || |||| |||||||||||||||||||||||||||||||||||    
T  730314 ttttcatgctaaaatttcactagaaaatctcacaaaatccatcaaaatctgatttattaaacaat 730250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 149 - 222
Target Start/End: Complemental strand, 29556277 - 29556204
Alignment:
Q  149 aaaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatc 222  Q
    |||||||||||||| |||||||||||| | || ||||||| ||||||||||||||||| |||||||||||||||    
T  29556277 aaaagactttttcaagctaaaatttcattagaaaatcccataaaatccatcaaaatctaatttattaaacaatc 29556204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 150 - 223
Target Start/End: Original strand, 9577460 - 9577533
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    ||||| |||||||| ||||||||||||| || |||| |||||||||||||||||||  ||||||||||||||||    
T  9577460 aaagattttttcattctaaaatttcactagaaaatctcacaaaatccatcaaaatccaatttattaaacaatcc 9577533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 152 - 222
Target Start/End: Original strand, 37014670 - 37014740
Alignment:
Q  152 agactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatc 222  Q
    |||||||||||||||||||||||||| || ||||| |||||||||||||||||   |||||| ||||||||    
T  37014670 agactttttcatgctaaaatttcactagaaaatccgacaaaatccatcaaaattcaatttataaaacaatc 37014740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 150 - 223
Target Start/End: Complemental strand, 6312746 - 6312673
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    |||||||||||| || ||||||| ||||  | ||||||||||||||||||||||||  ||||||||||||||||    
T  6312746 aaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatcc 6312673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 150 - 223
Target Start/End: Original strand, 29396416 - 29396489
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    |||||||||||| || ||||||| ||||  | ||||||||||||||||||||||||  ||||||||||||||||    
T  29396416 aaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatcc 29396489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 150 - 223
Target Start/End: Complemental strand, 51701752 - 51701679
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    |||||||||||| || ||||||| ||||  | ||||||||||||||||||||||||  ||||||||||||||||    
T  51701752 aaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatcc 51701679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 150 - 222
Target Start/End: Original strand, 48177490 - 48177562
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatc 222  Q
    |||||||||||| || ||||||| ||||  | ||||||||||||||||||||||||  |||||||||||||||    
T  48177490 aaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatc 48177562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 150 - 223
Target Start/End: Original strand, 15835081 - 15835154
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    |||||||||||| || ||||||| ||||  | ||||||| ||||||||||||||||  ||||||||||||||||    
T  15835081 aaagactttttcttgttaaaattacactacaaaatcccataaaatccatcaaaatccaatttattaaacaatcc 15835154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 150 - 223
Target Start/End: Complemental strand, 25612329 - 25612256
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    |||||||||||| || |||||||  |||  | ||||||||||||||||||||||||  ||||||||||||||||    
T  25612329 aaagactttttcttgttaaaattatactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatcc 25612256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 150 - 223
Target Start/End: Complemental strand, 46328214 - 46328141
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    |||||||||||| || ||||||| ||||  | ||||||||||||||||||||||||  ||| ||||||||||||    
T  46328214 aaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaattaattaaacaatcc 46328141  T

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Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 223
Target Start/End: Original strand, 9322528 - 9322601
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    |||||||||||| || ||||||| ||||  | ||||||| |||||||||||||||   ||||||||||||||||    
T  9322528 aaagactttttcttgttaaaattacactacaaaatcccataaaatccatcaaaattcaatttattaaacaatcc 9322601  T

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Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 223
Target Start/End: Original strand, 28387421 - 28387494
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    |||||||||||  || |||||||  |||  | ||||||||||||||||||||||||  ||||||||||||||||    
T  28387421 aaagacttttttttgttaaaattaaactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatcc 28387494  T

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Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 220
Target Start/End: Complemental strand, 955882 - 955852
Alignment:
Q  190 aaaatccatcaaaatctgatttattaaacaa 220  Q
    |||||||||||||||||||||||||||||||    
T  955882 aaaatccatcaaaatctgatttattaaacaa 955852  T

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Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 195
Target Start/End: Complemental strand, 33025675 - 33025630
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatc 195  Q
    |||||||||||||||||||||||| | | || ||||||||||||||    
T  33025675 aaagactttttcatgctaaaattttattagaaaatcccacaaaatc 33025630  T

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Target: scaffold0004 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 150 - 222
Target Start/End: Complemental strand, 102274 - 102202
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatc 222  Q
    |||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||    
T  102274 aaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatc 102202  T

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Target: scaffold0113 (Bit Score: 62; Significance: 6e-27; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 150 - 223
Target Start/End: Original strand, 38923 - 38996
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    |||||||||||||||| ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  38923 aaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcc 38996  T

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Target: scaffold0151 (Bit Score: 58; Significance: 1e-24; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 150 - 223
Target Start/End: Original strand, 38633 - 38705
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| ||||||||||||||    
T  38633 aaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctga-ttattaaacaatcc 38705  T

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Target: scaffold0276 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0276
Description:

Target: scaffold0276; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 150 - 223
Target Start/End: Original strand, 567 - 640
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    |||||||||||||| | ||||||||||| || ||| ||||||||||||||||||| ||||||||||||||||||    
T  567 aaagactttttcataccaaaatttcactagaaaattccacaaaatccatcaaaatatgatttattaaacaatcc 640  T

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Target: scaffold0037 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 150 - 223
Target Start/End: Complemental strand, 100390 - 100317
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    |||||||||||| || |||||||||||| || || |||||||||||||||||||| ||||||||||||||||||    
T  100390 aaagactttttcttgttaaaatttcactagaaaaacccacaaaatccatcaaaatttgatttattaaacaatcc 100317  T

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Target: scaffold0054 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 150 - 221
Target Start/End: Original strand, 36935 - 37006
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaat 221  Q
    |||||||||||| || ||||||| ||||  | ||||||||||||||||||||||||  ||||||||||||||    
T  36935 aaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaat 37006  T

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Target: scaffold0110 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 150 - 223
Target Start/End: Original strand, 39645 - 39718
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    |||||||||||| || ||||||| ||||  | ||||||||||||||||||||||||  |||||||||| |||||    
T  39645 aaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaataatcc 39718  T

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Target: scaffold0839 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0839
Description:

Target: scaffold0839; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 150 - 222
Target Start/End: Original strand, 3720 - 3792
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatc 222  Q
    |||||| ||||| || ||||||| ||||  | ||||||||||||||||||||||||  |||||||||||||||    
T  3720 aaagaccttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatc 3792  T

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Target: scaffold0543 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0543
Description:

Target: scaffold0543; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 223
Target Start/End: Complemental strand, 10739 - 10666
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaacaatcc 223  Q
    |||||||||||| || ||||||| ||||  | ||||||| |||||||||||||||   ||||||||||||||||    
T  10739 aaagactttttcttgttaaaattacactacaaaatcccataaaatccatcaaaattcaatttattaaacaatcc 10666  T

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Target: scaffold0042 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 182 - 222
Target Start/End: Original strand, 58136 - 58176
Alignment:
Q  182 aatcccacaaaatccatcaaaatctgatttattaaacaatc 222  Q
    ||||||||||||||||||||||||  |||||||||||||||    
T  58136 aatcccacaaaatccatcaaaatccaatttattaaacaatc 58176  T

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Target: scaffold1504 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold1504
Description:

Target: scaffold1504; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 150 - 217
Target Start/End: Complemental strand, 1042 - 976
Alignment:
Q  150 aaagactttttcatgctaaaatttcactggataatcccacaaaatccatcaaaatctgatttattaaa 217  Q
    ||||||||||||  | ||||||| ||||  | ||||||||||||||||||||||||| ||||||||||    
T  1042 aaagactttttctagttaaaattacactacaaaatcccacaaaatccatcaaaatct-atttattaaa 976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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