View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF8406_low_1 (Length: 579)
Name: NF8406_low_1
Description: NF8406
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8406_low_1 |
 | |
|
| [»] scaffold0074 (1 HSPs) |
| | |
|
Alignment Details
Target: chr5 (Bit Score: 511; Significance: 0; HSPs: 5)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 511; E-Value: 0
Query Start/End: Original strand, 19 - 561
Target Start/End: Complemental strand, 41723419 - 41722878
Alignment:
| Q |
19 |
agctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaagagtagag |
118 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41723419 |
agctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaagagtagag |
41723320 |
T |
|
| Q |
119 |
aactttcactaagtggaagaaattacaggacctctctctaaatacaaggagagtacaattaccactctctcttataaataggagaatacaaactaacaca |
218 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
41723319 |
aactttcactaagtggaagaaattacaggacctctctctaactacaaggagagtacaaataccactctctcttataaataggagaatactaactaacaca |
41723220 |
T |
|
| Q |
219 |
aactaggagaaacctcacaggagaaactaatttttctctctatattttttctctcactactctaaacaagctttacttgttcttgtgttgttactgattt |
318 |
Q |
| |
|
||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41723219 |
aactaggagaaacctcacaggagaaactatttttcctctctatattttttctctcacta-tctaaacaagctttacttgttcttgtgttgttactgattt |
41723121 |
T |
|
| Q |
319 |
gggatgagtagaatggtgcaagggacatgctatttataggaccgtaaaagccatgcctcaaccattttcatttattaccatagataatagccaaactgcc |
418 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41723120 |
gggatgagtagaatggtgcaagggacatgctatttataggaccgtaaaagccatgcctcaaccattttcatttattaccatagataatagccaaactgcc |
41723021 |
T |
|
| Q |
419 |
aaccaatttatgttgacaatgttggcaccgaaaatctgaatggtaaattgcaaagcccttttgtcaaacatgtattactgccatgtgaaaacatatcaac |
518 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41723020 |
aaccaatttatgttgacaatgttggcaccgaaaatctgaatggtaaattgcaaaacccttttgtcaaacatgtattactgccatgtgaaaacatatcaac |
41722921 |
T |
|
| Q |
519 |
aaaaggtgactttatggcttatgtgttcacacatgttcacaat |
561 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41722920 |
aaaaggtgactttatggcttatgtgttcacacatgttcacaat |
41722878 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 509; E-Value: 0
Query Start/End: Original strand, 19 - 559
Target Start/End: Complemental strand, 41718693 - 41718154
Alignment:
| Q |
19 |
agctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaagagtagag |
118 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41718693 |
agctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaagagtagag |
41718594 |
T |
|
| Q |
119 |
aactttcactaagtggaagaaattacaggacctctctctaaatacaaggagagtacaattaccactctctcttataaataggagaatacaaactaacaca |
218 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
41718593 |
aactttcactaagtggaagaaattacaggacctctctctaactacaaggagagtacaaataccactctctcttataaataggagaatactaactaacaca |
41718494 |
T |
|
| Q |
219 |
aactaggagaaacctcacaggagaaactaatttttctctctatattttttctctcactactctaaacaagctttacttgttcttgtgttgttactgattt |
318 |
Q |
| |
|
||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41718493 |
aactaggagaaacctcacaggagaaactatttttcctctctatattttttctctcacta-tctaaacaagctttacttgttcttgtgttgttactgattt |
41718395 |
T |
|
| Q |
319 |
gggatgagtagaatggtgcaagggacatgctatttataggaccgtaaaagccatgcctcaaccattttcatttattaccatagataatagccaaactgcc |
418 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41718394 |
gggatgagtagaatggtgcaagggacatgctatttataggaccgtaaaagccatgcctcaaccattttcatttattaccatagataatagccaaactgcc |
41718295 |
T |
|
| Q |
419 |
aaccaatttatgttgacaatgttggcaccgaaaatctgaatggtaaattgcaaagcccttttgtcaaacatgtattactgccatgtgaaaacatatcaac |
518 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41718294 |
aaccaatttatgttgacaatgttggcaccgaaaatctgaatggtaaattgcaaaacccttttgtcaaacatgtattactgccatgtgaaaacatatcaac |
41718195 |
T |
|
| Q |
519 |
aaaaggtgactttatggcttatgtgttcacacatgttcaca |
559 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41718194 |
aaaaggtgactttatggcttatgtgttcacacatgttcaca |
41718154 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 287; E-Value: 1e-161
Query Start/End: Original strand, 19 - 325
Target Start/End: Complemental strand, 34352531 - 34352226
Alignment:
| Q |
19 |
agctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaagagtagag |
118 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34352531 |
agctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaagagtagag |
34352432 |
T |
|
| Q |
119 |
aactttcactaagtggaagaaattacaggacctctctctaaatacaaggagagtacaattaccactctctcttataaataggagaatacaaactaacaca |
218 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
34352431 |
aactttcactaagtggaagaaattacaggacctctctctaactacaaggagagtacaattaccactctctcttataaataggagaatactaactaacaca |
34352332 |
T |
|
| Q |
219 |
aactaggagaaacctcacaggagaaactaatttttctctctatattttttctctcactactctaaacaagctttacttgttcttgtgttgttactgattt |
318 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34352331 |
aactaggagaaatctcacaggagaaactaatttttctctctatattttttctctcacta-tctaaacaagctttacttgttcttgtgttgttactgattt |
34352233 |
T |
|
| Q |
319 |
gggatga |
325 |
Q |
| |
|
||||||| |
|
|
| T |
34352232 |
gggatga |
34352226 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 19 - 325
Target Start/End: Complemental strand, 34360239 - 34359934
Alignment:
| Q |
19 |
agctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaagagtagag |
118 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34360239 |
agctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtagaaacccctcaacaaataaggggaaaaaaccacggggcaagagtagag |
34360140 |
T |
|
| Q |
119 |
aactttcactaagtggaagaaattacaggacctctctctaaatacaaggagagtacaattaccactctctcttataaataggagaatacaaactaacaca |
218 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
34360139 |
aactttcactaagtggaagaaattacaggacctctctctaactacaaggagagtacaattaccactctctcttataaataggagaatactaactaacaca |
34360040 |
T |
|
| Q |
219 |
aactaggagaaacctcacaggagaaactaatttttctctctatattttttctctcactactctaaacaagctttacttgttcttgtgttgttactgattt |
318 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34360039 |
aactaggagaaatctcacaggagaaactaatttttctctctatattttttctctcacta-tctaaacaagctttacttgttcttgtgttgttactgattt |
34359941 |
T |
|
| Q |
319 |
gggatga |
325 |
Q |
| |
|
||||||| |
|
|
| T |
34359940 |
gggatga |
34359934 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 279; E-Value: 1e-156
Query Start/End: Original strand, 19 - 325
Target Start/End: Original strand, 29585334 - 29585640
Alignment:
| Q |
19 |
agctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaagagtagag |
118 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29585334 |
agctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaagagtagag |
29585433 |
T |
|
| Q |
119 |
aactttcactaagtggaagaaattacaggacctctctctaaatacaaggagagtacaattaccactctctcttataaataggagaatacaaactaacaca |
218 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||| ||| |
|
|
| T |
29585434 |
aactttcactaagtggaagaaattacaggacctctctctaactacaaagagagtacaattaccactctctcttataaataggagaatactaactaataca |
29585533 |
T |
|
| Q |
219 |
aactaggagaaacctcacaggagaaactaatttttctctctatattttttctctcactactctaaacaagctttacttgttcttgtgttgttactgattt |
318 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| |||||||||||||||||| |
|
|
| T |
29585534 |
aactaggagaaacctcacaggagaaactaatttttctctctatatttttcctctcactactctagacaagctttacttgttgttgtgttgttactgattt |
29585633 |
T |
|
| Q |
319 |
gggatga |
325 |
Q |
| |
|
||||||| |
|
|
| T |
29585634 |
gggatga |
29585640 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 311; Significance: 1e-175; HSPs: 13)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 311; E-Value: 1e-175
Query Start/End: Original strand, 19 - 393
Target Start/End: Original strand, 48701855 - 48702228
Alignment:
| Q |
19 |
agctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaagagtagag |
118 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
48701855 |
agctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaagagtagag |
48701954 |
T |
|
| Q |
119 |
aactttcactaagtggaagaaattacaggacctctctctaaatacaaggagagtacaattaccactctctcttataaataggagaatacaaactaacaca |
218 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
48701955 |
aactttcactaagtggaagaaattacaggacctctctctaactacaaggagagtacaaataccactctctcttataaataggagaatactaactaacaca |
48702054 |
T |
|
| Q |
219 |
aactaggagaaacctcacaggagaaactaatttttctctctatattttttctctcactactctaaacaagctttacttgttcttgtgttgttactgattt |
318 |
Q |
| |
|
||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
48702055 |
aactaggagaaacctcacaggagaaactatttttcctctctatattttttctctcacta-tctaaacaagctttacttgttcttgtgttgttactgattt |
48702153 |
T |
|
| Q |
319 |
gggatgagtagaatggtgcaagggacatgctatttataggaccgtaaaagccatgcctcaaccattttcatttat |
393 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| | | || ||||||||| |||||| || ||||||| |
|
|
| T |
48702154 |
gggatgagtagaatggtgcaagggacatgctatttatactagtgaaagagccatgccccaaccaattgcatttat |
48702228 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 292; E-Value: 1e-164
Query Start/End: Original strand, 19 - 393
Target Start/End: Original strand, 48697165 - 48697539
Alignment:
| Q |
19 |
agctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaa-aaccacggggcaagagtaga |
117 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
48697165 |
agctaaaataagagaagagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaaccacggggcaagagtaga |
48697264 |
T |
|
| Q |
118 |
gaactttcactaagtggaagaaattacaggacctctctctaaatacaaggagagtacaattaccactctctcttataaataggagaatacaaactaacac |
217 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
48697265 |
gaactttcactaagtggaagaaattacaggacctctctctaactacaaggagagtacaaataccactctctcttataaataggagaatactaactaacac |
48697364 |
T |
|
| Q |
218 |
aaactaggagaaacctcacaggagaaactaatttttctctctatattttttctctcactactctaaacaagctttacttgttcttgtgttgttactgatt |
317 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
48697365 |
aaactaggagaaacctcacaggagaaactatttttcctctctatattttttctctcacta-tctaaacaagctttacttgttcttgtgttgttactgatt |
48697463 |
T |
|
| Q |
318 |
tgggatgagtagaatggtgcaagggacatgctatttataggaccgtaaaagccatgcctcaaccattttcatttat |
393 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||| | | || ||||||||| |||||| || ||||||| |
|
|
| T |
48697464 |
tgggatgagtagaataatgcaagggacatgctatttatactagtgaaagagccatgccccaaccaattgcatttat |
48697539 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 285; E-Value: 1e-159
Query Start/End: Original strand, 19 - 323
Target Start/End: Complemental strand, 42266186 - 42265883
Alignment:
| Q |
19 |
agctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaagagtagag |
118 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42266186 |
agctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaagagtagag |
42266087 |
T |
|
| Q |
119 |
aactttcactaagtggaagaaattacaggacctctctctaaatacaaggagagtacaattaccactctctcttataaataggagaatacaaactaacaca |
218 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42266086 |
aactttcactaagtggaagaaattacaggacctctctctaaatacaaggagagtacaattaccactctctcttataaataggagaatacaaactaacaca |
42265987 |
T |
|
| Q |
219 |
aactaggagaaacctcacaggagaaactaatttttctctctatattttttctctcactactctaaacaagctttacttgttcttgtgttgttactgattt |
318 |
Q |
| |
|
||||||||||||||||||||||||| ||| |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42265986 |
aactaggagaaacctcacaggagaagctatttttcctctctatattttttctctcacta-tctaaacaagctttacttgttcttgtgttgttactgattt |
42265888 |
T |
|
| Q |
319 |
gggat |
323 |
Q |
| |
|
||||| |
|
|
| T |
42265887 |
gggat |
42265883 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 285; E-Value: 1e-159
Query Start/End: Original strand, 19 - 323
Target Start/End: Complemental strand, 42270905 - 42270602
Alignment:
| Q |
19 |
agctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaagagtagag |
118 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42270905 |
agctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaagagtagag |
42270806 |
T |
|
| Q |
119 |
aactttcactaagtggaagaaattacaggacctctctctaaatacaaggagagtacaattaccactctctcttataaataggagaatacaaactaacaca |
218 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42270805 |
aactttcactaagtggaagaaattacaggacctctctctaaatacaaggagagtacaattaccactctctcttataaataggagaatacaaactaacaca |
42270706 |
T |
|
| Q |
219 |
aactaggagaaacctcacaggagaaactaatttttctctctatattttttctctcactactctaaacaagctttacttgttcttgtgttgttactgattt |
318 |
Q |
| |
|
||||||||||||||||||||||||| ||| |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42270705 |
aactaggagaaacctcacaggagaagctatttttcctctctatattttttctctcacta-tctaaacaagctttacttgttcttgtgttgttactgattt |
42270607 |
T |
|
| Q |
319 |
gggat |
323 |
Q |
| |
|
||||| |
|
|
| T |
42270606 |
gggat |
42270602 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 280; E-Value: 1e-156
Query Start/End: Original strand, 21 - 324
Target Start/End: Original strand, 24520061 - 24520363
Alignment:
| Q |
21 |
ctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaagagtagagaa |
120 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24520061 |
ctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaagagtagagaa |
24520160 |
T |
|
| Q |
121 |
ctttcactaagtggaagaaattacaggacctctctctaaatacaaggagagtacaattaccactctctcttataaataggagaatacaaactaacacaaa |
220 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
24520161 |
ctttcactaagtggaagaaattacaggacctctctctaactacaaggagagtacaattaccactctctcttataaataggagaatactaactaacacaaa |
24520260 |
T |
|
| Q |
221 |
ctaggagaaacctcacaggagaaactaatttttctctctatattttttctctcactactctaaacaagctttacttgttcttgtgttgttactgatttgg |
320 |
Q |
| |
|
||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24520261 |
ctaggagaaacctcacaggagaaactatttttcctctctatattttttctctcacta-tctaaacaagctttacttgttcttgtgttgttactgatttgg |
24520359 |
T |
|
| Q |
321 |
gatg |
324 |
Q |
| |
|
|||| |
|
|
| T |
24520360 |
gatg |
24520363 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 19 - 393
Target Start/End: Original strand, 30945511 - 30945901
Alignment:
| Q |
19 |
agctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaagagtagag |
118 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| |
|
|
| T |
30945511 |
agctaaaataagagaagagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggg-aaaaaatcacggggcaagagtagag |
30945609 |
T |
|
| Q |
119 |
aactttcactaagtggaagaaattacaggacctctctctaaatacaaggagagtacaattaccactctctcttataaataggagaatacaa--actaaca |
216 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
30945610 |
aactttcactaagtggaagaaattacagaacctctctctaaatacaaggagagtacaattaccactctctcttataaataggagaatacaaacactaaca |
30945709 |
T |
|
| Q |
217 |
caaactaggagaaacctcacaggagaaactaatttttctctctatattttttctctcactactcta-----aacaa---------gctttac-ttgttct |
301 |
Q |
| |
|
| | ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| |||| ||||| | |||| ||||||| |
|
|
| T |
30945710 |
ctacctaggagaaacctcacaggagaaactaatttttctctctatatttttcctctctctattctactaagaacaagtagttgttgtgttactttgttct |
30945809 |
T |
|
| Q |
302 |
tgtgttgttactgatttgggatgagtagaatggtgcaagggacatgctatttataggaccgtaaaagccatgcctcaaccattttcatttat |
393 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||||||||||||| | | || ||||||||| |||||| || ||||||| |
|
|
| T |
30945810 |
ggtgttgttactaatttgggatgagtagaatggtgcaagggacatgctatttatactagtgaaagagccatgccccaaccaattgcatttat |
30945901 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 19 - 393
Target Start/End: Original strand, 30950217 - 30950607
Alignment:
| Q |
19 |
agctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaagagtagag |
118 |
Q |
| |
|
||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
30950217 |
agctaaaataagataagagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggg-aaaaaaccacggggcaagagtagag |
30950315 |
T |
|
| Q |
119 |
aactttcactaagtggaagaaattacaggacctctctctaaatacaaggagagtacaattaccactctctcttataaataggagaatacaa--actaaca |
216 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
30950316 |
aactttcactaagtggaagaaattacagaacctctctctaaatacaaggaaagtacaattaccactctctcttataaataggagaatacaaacactaaca |
30950415 |
T |
|
| Q |
217 |
caaactaggagaaacctcacaggagaaactaatttttctctctatattttttctctcactactcta-----aacaa---------gctttac-ttgttct |
301 |
Q |
| |
|
| | ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| |||| ||||| | |||| ||||| | |
|
|
| T |
30950416 |
ctacctaggagaaacctcacaggagaaactaatttttctctctatatttttcctctctctattctactaagaacaagtagttgttgtgttactttgttat |
30950515 |
T |
|
| Q |
302 |
tgtgttgttactgatttgggatgagtagaatggtgcaagggacatgctatttataggaccgtaaaagccatgcctcaaccattttcatttat |
393 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||||||||||||| | | || ||||||||| |||||| || ||||||| |
|
|
| T |
30950516 |
ggtgttgttactaatttgggatgagtagaatggtgcaagggacatgctatttatactagtgaaagagccatgccccaaccaattgcatttat |
30950607 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 140; E-Value: 5e-73
Query Start/End: Original strand, 21 - 276
Target Start/End: Complemental strand, 10427561 - 10427315
Alignment:
| Q |
21 |
ctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaagagtagagaa |
120 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| || |||||| || |
|
|
| T |
10427561 |
ctaaaataagagacgagaaaagaggaactgaacacacaatattttacgcggaaacccctcaacaaataaggggaaaaaactacggggaaaaagtagataa |
10427462 |
T |
|
| Q |
121 |
ctttcactaagtggaaga-aattacaggacctctctctaaatacaaggagagtacaattaccactctctcttataaataggagaatacaaactaacacaa |
219 |
Q |
| |
|
|||||||||||||||||| ||||||| ||| ||||||||||||||||||||| ||||||| ||||||||| |||||||||||||| ||| |
|
|
| T |
10427461 |
ctttcactaagtggaagacaattacaagacttctctctaaatacaaggagagacaaattacc-ctctctctt-gaaataggagaatactaac-------- |
10427372 |
T |
|
| Q |
220 |
actaggagaaacctcacaggagaaactaatttttctctctatattttttctctcact |
276 |
Q |
| |
|
|||||||||||||||||||||||||||| ||| |||||||||||||| |||||||| |
|
|
| T |
10427371 |
actaggagaaacctcacaggagaaactatatttcctctctatatttttcctctcact |
10427315 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 22 - 193
Target Start/End: Complemental strand, 48783007 - 48782850
Alignment:
| Q |
22 |
taaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaagagtagagaac |
121 |
Q |
| |
|
|||||||||| ||||||||| |||||||||||||||||||||| ||||||||| |||||||||||| |||||||| || |||| ||||| |
|
|
| T |
48783007 |
taaaataagaaacgagaaaacaggaactgaacacacaatattt-acgtggaaatttctcaacaaataaagggaaaaa--catgggg---------agaac |
48782920 |
T |
|
| Q |
122 |
tttcactaagtggaagaaattacaggacctctctctaaatacaaggagagtacaattaccactctctcttat |
193 |
Q |
| |
|
|||||||||||||||||||||| | |||||||||||||||||| | ||||||||||||||||||||||||| |
|
|
| T |
48782919 |
tttcactaagtggaagaaattagatgacctctctctaaatacatg--gagtacaattaccactctctcttat |
48782850 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 109 - 237
Target Start/End: Complemental strand, 1979375 - 1979253
Alignment:
| Q |
109 |
aagagtagagaactttcactaagtggaagaaattacaggacctctctctaaatacaaggagagtacaattaccactctctcttataaataggagaataca |
208 |
Q |
| |
|
||||||||| |||||||| |||| ||||||||||||| ||||||||| |||| ||||||| ||| | |||||||||||||||||||| |||||||| |
|
|
| T |
1979375 |
aagagtagataactttcagtaagaggaagaaattacacgacctctct--aaatgcaaggagggtatatttaccactctctcttataaacaggagaat--- |
1979281 |
T |
|
| Q |
209 |
aactaacacaaactaggagaaacctcaca |
237 |
Q |
| |
|
|||| ||| ||| ||||||||||||||| |
|
|
| T |
1979280 |
-actagcactaaccaggagaaacctcaca |
1979253 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 38 - 136
Target Start/End: Complemental strand, 17248112 - 17248015
Alignment:
| Q |
38 |
aaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaa |
136 |
Q |
| |
|
||||||| |||| || ||||||||||| || |||||| |||| || |||||||||||||||||||| || ||||||| |||||||||| ||||||||| |
|
|
| T |
17248112 |
aaaagagaaactaaatacacaatattt-acatggaaatcccttaataaataaggggaaaaaaccaccggataagagtatagaactttcattaagtggaa |
17248015 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 51 - 89
Target Start/End: Complemental strand, 1979604 - 1979567
Alignment:
| Q |
51 |
aacacacaatattttacgtggaaacccctcaacaaataa |
89 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
1979604 |
aacacacaatattt-acgtggaaacccctcaacaaataa |
1979567 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 416 - 509
Target Start/End: Complemental strand, 48781360 - 48781266
Alignment:
| Q |
416 |
gccaaccaatttatgttgacaatgttggcaccgaaaatctgaatggtaaattgcaaa--gcccttttgtcaaacatgtattactgccatgtgaaaa |
509 |
Q |
| |
|
||||||||||||||||||| ||| | ||||| ||||| | |||| ||||| ||||| ||||||| |||||||| | ||||||||||||||||| |
|
|
| T |
48781360 |
gccaaccaatttatgttgaaaatatatgcaccaaaaatataaatgttaaat-gcaaaaagccctttcgtcaaacaccttttactgccatgtgaaaa |
48781266 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 311; Significance: 1e-175; HSPs: 13)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 311; E-Value: 1e-175
Query Start/End: Original strand, 19 - 393
Target Start/End: Original strand, 5198689 - 5199062
Alignment:
| Q |
19 |
agctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaagagtagag |
118 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5198689 |
agctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaagagtagag |
5198788 |
T |
|
| Q |
119 |
aactttcactaagtggaagaaattacaggacctctctctaaatacaaggagagtacaattaccactctctcttataaataggagaatacaaactaacaca |
218 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
5198789 |
aactttcactaagtggaagaaattacaggacctctctctaactacaaggagagtacaaataccactctctcttataaataggagaatactaactaacaca |
5198888 |
T |
|
| Q |
219 |
aactaggagaaacctcacaggagaaactaatttttctctctatattttttctctcactactctaaacaagctttacttgttcttgtgttgttactgattt |
318 |
Q |
| |
|
||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5198889 |
aactaggagaaacctcacaggagaaactatttttcctctctatattttttctctcacta-tctaaacaagctttacttgttcttgtgttgttactgattt |
5198987 |
T |
|
| Q |
319 |
gggatgagtagaatggtgcaagggacatgctatttataggaccgtaaaagccatgcctcaaccattttcatttat |
393 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| | | || ||||||||| |||||| || ||||||| |
|
|
| T |
5198988 |
gggatgagtagaatggtgcaagggacatgctatttatactagtgaaagagccatgccccaaccaattgcatttat |
5199062 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 24 - 274
Target Start/End: Complemental strand, 15603155 - 15602905
Alignment:
| Q |
24 |
aaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaagagtagagaactt |
123 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15603155 |
aaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaagagtagagaactt |
15603056 |
T |
|
| Q |
124 |
tcactaagtggaagaaattacaggacctctctctaaatacaaggagagtacaattaccactctctcttataaataggagaatacaaactaacacaaacta |
223 |
Q |
| |
|
||||||||| |||||||||||| ||||||||||||||| || |||| |||||||||||| ||| |||| ||||||||||||||| ||||||||| |||| |
|
|
| T |
15603055 |
tcactaagtagaagaaattacaagacctctctctaaatgcatggagtgtacaattaccattctatcttgtaaataggagaatactaactaacacttacta |
15602956 |
T |
|
| Q |
224 |
ggagaaacctcacaggagaaactaatttttctctctatattttttctctca |
274 |
Q |
| |
|
||||||||||| || | || ||||||||||| ||||||||||| |||||| |
|
|
| T |
15602955 |
agagaaacctcatagaaaaatctaatttttctttctatatttttcctctca |
15602905 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 19 - 148
Target Start/End: Complemental strand, 825762 - 825632
Alignment:
| Q |
19 |
agctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaa-aaaaccacggggcaagagtaga |
117 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
825762 |
agctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaaccactcaacaaataaggggaaaaaaaccacggggcaagagtaga |
825663 |
T |
|
| Q |
118 |
gaactttcactaagtggaagaaattacagga |
148 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
825662 |
gaactttcactaagtggaagaaattacagga |
825632 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 22 - 148
Target Start/End: Complemental strand, 830415 - 830288
Alignment:
| Q |
22 |
taaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaa-aaaaccacggggcaagagtagagaa |
120 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||| |
|
|
| T |
830415 |
taaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaaccacggggcaagagtggagaa |
830316 |
T |
|
| Q |
121 |
ctttcactaagtggaagaaattacagga |
148 |
Q |
| |
|
|||||||||||||||||||||||||||| |
|
|
| T |
830315 |
ctttcactaagtggaagaaattacagga |
830288 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 22 - 252
Target Start/End: Complemental strand, 28716040 - 28715816
Alignment:
| Q |
22 |
taaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaagagtagagaac |
121 |
Q |
| |
|
||||||||||||||| |||||||||| |||||||||||||||| |||||||||||||||| ||||||||||||||| |||| | |||| |||||||| |
|
|
| T |
28716040 |
taaaataagagacgacaaaagaggaattgaacacacaatattt-acgtggaaacccctcattaaataaggggaaaaa-ccacaagagaagaatagagaac |
28715943 |
T |
|
| Q |
122 |
tttcactaagtggaagaaattacaggacctctctctaaatacaaggagagtacaattaccactctctcttataaataggagaatacaaactaacacaaac |
221 |
Q |
| |
|
|||||| ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| | || ||||||||||||||| |||||||| | | |
|
|
| T |
28715942 |
tttcacaaagtggaagaaattacaggacatctctctaaatgcaaggagagtacaattaccaccgtttcctataaataggagaat----actaacactacc |
28715847 |
T |
|
| Q |
222 |
taggagaaacctcacaggagaaactaatttt |
252 |
Q |
| |
|
|||||||||||| ||| ||||||||| |||| |
|
|
| T |
28715846 |
taggagaaaccttacaagagaaactattttt |
28715816 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 19 - 276
Target Start/End: Original strand, 30396945 - 30397191
Alignment:
| Q |
19 |
agctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaagagtagag |
118 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||| |||||| ||| |||||||||||||||||||||| |||||| ||| |||| ||||||||| |
|
|
| T |
30396945 |
agctaaaataagagacgagaaaagacgaactgaacacaca-tatttt-cgttgaaacccctcaacaaataagggaaaaaaatcacagggcgagagtagag |
30397042 |
T |
|
| Q |
119 |
aac-tttcactaagtggaagaaattacaggacctctctctaaatacaaggagagtacaattaccactctctcttataaataggagaatacaaactaacac |
217 |
Q |
| |
|
||| |||||||||||||||||||||||| ||||||| |||| |||||||||||| ||||||| |||| | || ||||||||||||| ||| |
|
|
| T |
30397043 |
aacttttcactaagtggaagaaattacaagacctctttctatatacaaggagagacaaattacc-ctctatgtt-gaaataggagaatattaac------ |
30397134 |
T |
|
| Q |
218 |
aaactaggagaaacctcacaggagaaactaatttttctctctatattttttctctcact |
276 |
Q |
| |
|
||||||||||| |||||||||||||||| ||| ||||||||||| || |||||||| |
|
|
| T |
30397135 |
--actaggagaaatctcacaggagaaactatatttcctctctatattgttcctctcact |
30397191 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 198 - 282
Target Start/End: Complemental strand, 830291 - 830205
Alignment:
| Q |
198 |
aggagaatacaaac--taacacaaactaggagaaacctcacaggagaaactaatttttctctctatattttttctctcactactcta |
282 |
Q |
| |
|
|||||||||||||| |||||| | ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| |
|
|
| T |
830291 |
aggagaatacaaacactaacactacctaggagaaacctcacaggagaaactaatttttctctctatatttttcctctcactattcta |
830205 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 198 - 282
Target Start/End: Complemental strand, 825635 - 825549
Alignment:
| Q |
198 |
aggagaatacaaac--taacacaaactaggagaaacctcacaggagaaactaatttttctctctatattttttctctcactactcta |
282 |
Q |
| |
|
|||||||||||||| |||||| | |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| |||| |
|
|
| T |
825635 |
aggagaatacaaacactaacactacctaggagaaacctcgcaggagaaactaatttttctctctatatttttcctctcactattcta |
825549 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 54 - 205
Target Start/End: Original strand, 13843865 - 13844014
Alignment:
| Q |
54 |
acacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctct |
153 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||| |||||| | || || |||| |||| ||||| ||||||||||||||||||||||| || |
|
|
| T |
13843865 |
acacaatattt-acgtggaaacccctcaacaaataaggagaaaaatt-ataggttaaaagtatagaattttcattaagtggaagaaattacaggacccct |
13843962 |
T |
|
| Q |
154 |
ctctaaatacaaggagagtacaattaccactctctcttataaataggagaat |
205 |
Q |
| |
|
| |||||||||| ||| || |||||||||||| | ||| |||||||||||| |
|
|
| T |
13843963 |
ttataaatacaagaagaataaaattaccactctattttaaaaataggagaat |
13844014 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 80 - 207
Target Start/End: Complemental strand, 8004292 - 8004167
Alignment:
| Q |
80 |
caacaaataaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaaatacaaggagagtacaatta |
179 |
Q |
| |
|
||||||||||| ||||||| | |||||| | || |||| |||||||||| | |||||||||||| | |||||||| ||||| ||| |||||||||||| |
|
|
| T |
8004292 |
caacaaataagaggaaaaa-caacggggtatgactagaaaactttcactgaatggaagaaattataaaacctctctttaaatgtaagaagagtacaatta |
8004194 |
T |
|
| Q |
180 |
ccactctctcttataaataggagaatac |
207 |
Q |
| |
|
||||||||||||||||||||||||||| |
|
|
| T |
8004193 |
-cactctctcttataaataggagaatac |
8004167 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 25 - 145
Target Start/End: Original strand, 31592950 - 31593068
Alignment:
| Q |
25 |
aataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaagagtagagaacttt |
124 |
Q |
| |
|
|||||||||||||||||||||||| |||| |||||| |||||||||||| | ||||| |||||| | |||||||||| | |||||||||||||||| |
|
|
| T |
31592950 |
aataagagacgagaaaagaggaacataacatacaataatttacgtggaaatctctcaataaataa-gaaaaaaaaccac-agataagagtagagaacttt |
31593047 |
T |
|
| Q |
125 |
cactaagtggaagaaattaca |
145 |
Q |
| |
|
|||||| | ||||||||||| |
|
|
| T |
31593048 |
cactaaccgaaagaaattaca |
31593068 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 77 - 207
Target Start/End: Original strand, 13840329 - 13840456
Alignment:
| Q |
77 |
cctcaacaaataaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaaatacaaggagagtacaa |
176 |
Q |
| |
|
|||||||||| |||||| |||| || || ||||||||||| || ||| || |||| || |||||||| ||||||||||||||| ||||||||||||| |
|
|
| T |
13840329 |
cctcaacaaacaagggggaaaa--catggagcaagagtagaaaatttttaccaagtaaaa-aaattacaaaacctctctctaaatataaggagagtacaa |
13840425 |
T |
|
| Q |
177 |
ttaccactctctcttataaataggagaatac |
207 |
Q |
| |
|
|||| | ||||||||| ||||| ||||||| |
|
|
| T |
13840426 |
ttacaattctctcttaaaaataaaagaatac |
13840456 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 46 - 155
Target Start/End: Complemental strand, 42117876 - 42117769
Alignment:
| Q |
46 |
aactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattaca |
145 |
Q |
| |
|
||||||||| ||||||||| |||| |||||| ||||| |||||||||| ||||||||| | ||| |||||| |||||||| ||| | |||||||| | |
|
|
| T |
42117876 |
aactgaacatacaatattt-acgtagaaacctctcaattaataagggga-aaaaccacgagacaaaagtagataactttcattaaacgagagaaattata |
42117779 |
T |
|
| Q |
146 |
ggacctctct |
155 |
Q |
| |
|
||||||||| |
|
|
| T |
42117778 |
agacctctct |
42117769 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 282; Significance: 1e-158; HSPs: 10)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 19 - 324
Target Start/End: Original strand, 5823309 - 5823613
Alignment:
| Q |
19 |
agctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaagagtagag |
118 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5823309 |
agctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaagagtagag |
5823408 |
T |
|
| Q |
119 |
aactttcactaagtggaagaaattacaggacctctctctaaatacaaggagagtacaattaccactctctcttataaataggagaatacaaactaacaca |
218 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
5823409 |
aactttcactaagtggaagaaattacaggacctctctctaactacaaggagagtacaattaccactctctcttataaataggagaatactaactaacaca |
5823508 |
T |
|
| Q |
219 |
aactaggagaaacctcacaggagaaactaatttttctctctatattttttctctcactactctaaacaagctttacttgttcttgtgttgttactgattt |
318 |
Q |
| |
|
||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5823509 |
aactaggagaaacctcacaggagaaactatttttcctctctatattttttctctcacta-tctaaacaagctttacttgttcttgtgttgttactgattt |
5823607 |
T |
|
| Q |
319 |
gggatg |
324 |
Q |
| |
|
|||||| |
|
|
| T |
5823608 |
gggatg |
5823613 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 277; E-Value: 1e-155
Query Start/End: Original strand, 21 - 325
Target Start/End: Original strand, 5818549 - 5818852
Alignment:
| Q |
21 |
ctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaagagtagagaa |
120 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
5818549 |
ctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaactaataaggggaaaaaaccacggggcaagagtagagaa |
5818648 |
T |
|
| Q |
121 |
ctttcactaagtggaagaaattacaggacctctctctaaatacaaggagagtacaattaccactctctcttataaataggagaatacaaactaacacaaa |
220 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
5818649 |
ctttcactaagtggaagaaattacaggacctctctctaactacaaggagagtacaattaccactctctcttataaataggagaatactaactaacacaaa |
5818748 |
T |
|
| Q |
221 |
ctaggagaaacctcacaggagaaactaatttttctctctatattttttctctcactactctaaacaagctttacttgttcttgtgttgttactgatttgg |
320 |
Q |
| |
|
||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5818749 |
ctaggagaaacctcacaggagaaactatttttcctctctatattttttctctcacta-tctaaacaagctttacttgttcttgtgttgttactgatttgg |
5818847 |
T |
|
| Q |
321 |
gatga |
325 |
Q |
| |
|
||||| |
|
|
| T |
5818848 |
gatga |
5818852 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 19 - 393
Target Start/End: Original strand, 2817297 - 2817658
Alignment:
| Q |
19 |
agctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaagagtagag |
118 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| || |
|
|
| T |
2817297 |
agctaaaataagagaagagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggg-aaaaaaccacagggcaagagtaaag |
2817395 |
T |
|
| Q |
119 |
aactttcactaagtggaagaaattacaggacctctctctaaatacaaggagagtacaattacca--ctctctcttataaataggagaatacaaactaaca |
216 |
Q |
| |
|
|||| |||||||||||||||||||||| || |||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||| |||||| | |
|
|
| T |
2817396 |
aactctcactaagtggaagaaattacaagaactctctctaaatacaaggagagtacaatcaccactctctctcttataaataggagaatactaactaata |
2817495 |
T |
|
| Q |
217 |
caaactaggagaaacctcacaggagaaactaatttttctctctatattttttctctcactactctaaacaagctttacttgttcttgtgttgttactgat |
316 |
Q |
| |
|
|||||| ||||||||||| |||| ||||||||||||||||||||| ||| ||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
2817496 |
caaact--------------aggagaaactatttttcctctctatattttttctctcattaccctaaacaagttttacttgttcttgtgttgttactgat |
2817581 |
T |
|
| Q |
317 |
ttgggatgagtagaatggtgcaagggacatgctatttataggaccgtaaaagccatgcctcaaccattttcatttat |
393 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||| | | || ||||||||| |||||| || ||||||| |
|
|
| T |
2817582 |
ttgggatgagtagaatggtgcaagggacatgctatgtatactagtgaaagagccatgccccaaccaattgcatttat |
2817658 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 19 - 282
Target Start/End: Complemental strand, 54546166 - 54545902
Alignment:
| Q |
19 |
agctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaagagtagag |
118 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
54546166 |
agctaaaataagagatgagaaaagaggaactgaacatacaatattt-acgtggaaacccctcaacaaataaggggaaaaaaccacggggctagagtagag |
54546068 |
T |
|
| Q |
119 |
aactttcactaagtggaagaaattacaggacctctctctaaatacaaggagagtacaattaccactctctcttataaataggagaatacaa--actaaca |
216 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
54546067 |
aactttcactaagtggatgaaattacaggacctctctctaactacaaggagagtacaattaccactctctcttataaataggagaatacaaacactaaca |
54545968 |
T |
|
| Q |
217 |
caaactaggagaaacctcacaggagaaactaatttttctctctatattttttctctcactactcta |
282 |
Q |
| |
|
| | ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| |
|
|
| T |
54545967 |
ctacctaggagaaacctcacaggagaaactaatttttctctctatatttttcctctcactattcta |
54545902 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 19 - 138
Target Start/End: Original strand, 24659170 - 24659287
Alignment:
| Q |
19 |
agctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaagagtagag |
118 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
24659170 |
agctaaaataagagatgagaaaagaggaactgaacacacaacattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaagagt--ag |
24659267 |
T |
|
| Q |
119 |
aactttcactaagtggaaga |
138 |
Q |
| |
|
|||||||||||||||||||| |
|
|
| T |
24659268 |
aactttcactaagtggaaga |
24659287 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 21 - 99
Target Start/End: Complemental strand, 4579332 - 4579254
Alignment:
| Q |
21 |
ctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaa |
99 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4579332 |
ctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaa |
4579254 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 38 - 171
Target Start/End: Original strand, 31204819 - 31204950
Alignment:
| Q |
38 |
aaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacgg-ggcaagagtagagaactttcactaagtggaa |
136 |
Q |
| |
|
|||||||||||||||| |||||||||| ||||||||||||||||||||||||| |||||||| ||||| ||||| ||||||||||||||||||||||| | |
|
|
| T |
31204819 |
aaaagaggaactgaactcacaatattt-acgtggaaacccctcaacaaataagaggaaaaaatcacggaggcaatagtagagaactttcactaagtggga |
31204917 |
T |
|
| Q |
137 |
gaaattacaggacctctctctaaatacaaggagag |
171 |
Q |
| |
|
|||||||| || ||||||||||| |||||||| |
|
|
| T |
31204918 |
aaaattacaaaac--ctctctaaatataaggagag |
31204950 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 138 - 276
Target Start/End: Original strand, 24671173 - 24671301
Alignment:
| Q |
138 |
aaattacaggacctctctctaaatacaaggagagtacaattaccactctctcttataaataggagaatacaaactaacacaaactaggagaaacctcaca |
237 |
Q |
| |
|
|||||||| ||| ||||||||||||||||||||| ||||||| ||||||||| |||||||||||||| ||| |||||||||||||||||| |
|
|
| T |
24671173 |
aaattacaagacttctctctaaatacaaggagagacaaattacc-ctctctcttg-aaataggagaatactaac--------actaggagaaacctcaca |
24671262 |
T |
|
| Q |
238 |
ggagaaactaatttttctctctatattttttctctcact |
276 |
Q |
| |
|
|||||||||| ||| |||||||||||||| |||||||| |
|
|
| T |
24671263 |
ggagaaactatatttcctctctatatttttcctctcact |
24671301 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 23 - 180
Target Start/End: Complemental strand, 35977258 - 35977103
Alignment:
| Q |
23 |
aaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaagagtaga-gaac |
121 |
Q |
| |
|
|||||||||| |||||||||| || |||||| ||||||||| |||| ||| || |||||| ||| |||||||| ||| |||||||||| | || |
|
|
| T |
35977258 |
aaaataagaggtgagaaaagagaaattgaacaaacaatattt-acgtaaaaaaccatcaacatata--gggaaaaactcacttggcaagagtaaaagagt |
35977162 |
T |
|
| Q |
122 |
tttcactaagtggaagaaattacaggacctctctctaaatacaaggagagtacaattac |
180 |
Q |
| |
|
||||||||||||||| |||||||| ||| ||||||||||||||||||||| |||||||| |
|
|
| T |
35977161 |
tttcactaagtggaaaaaattacaagacttctctctaaatacaaggagagaacaattac |
35977103 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 151 - 276
Target Start/End: Complemental strand, 4579241 - 4579126
Alignment:
| Q |
151 |
tctctctaaatacaaggagagtacaattaccactctctcttataaataggagaatacaaactaacacaaactaggagaaacctcacaggagaaactaatt |
250 |
Q |
| |
|
||||||||||||||||||||| ||||||| ||||||| | |||||||||||||| |||| ||| ||||||||||||||||||||||| | |
|
|
| T |
4579241 |
tctctctaaatacaaggagagacaaattacc-ctctctcgtg-aaataggagaatactaact--------ctatgagaaacctcacaggagaaactatat |
4579152 |
T |
|
| Q |
251 |
tttctctctatattttttctctcact |
276 |
Q |
| |
|
|| |||||||||||||| |||||||| |
|
|
| T |
4579151 |
ttcctctctatatttttcctctcact |
4579126 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 279; Significance: 1e-156; HSPs: 9)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 279; E-Value: 1e-156
Query Start/End: Original strand, 19 - 325
Target Start/End: Original strand, 26976165 - 26976470
Alignment:
| Q |
19 |
agctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaagagtagag |
118 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
26976165 |
agctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccaaggggcaagagtagag |
26976264 |
T |
|
| Q |
119 |
aactttcactaagtggaagaaattacaggacctctctctaaatacaaggagagtacaattaccactctctcttataaataggagaatacaaactaacaca |
218 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
26976265 |
aactttcactaagtggaagaaattacaggacctctctctaactacaaggagagtacaattaccactctctcttataaataggagaatactaactaacaca |
26976364 |
T |
|
| Q |
219 |
aactaggagaaacctcacaggagaaactaatttttctctctatattttttctctcactactctaaacaagctttacttgttcttgtgttgttactgattt |
318 |
Q |
| |
|
||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26976365 |
aactaggagaaacctcacaggagaaactatttttcctctctatattttttctctcacta-tctaaacaagctttacttgttcttgtgttgttactgattt |
26976463 |
T |
|
| Q |
319 |
gggatga |
325 |
Q |
| |
|
||||||| |
|
|
| T |
26976464 |
gggatga |
26976470 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 19 - 324
Target Start/End: Complemental strand, 1234984 - 1234680
Alignment:
| Q |
19 |
agctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaagagtagag |
118 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1234984 |
agctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaagagtagag |
1234885 |
T |
|
| Q |
119 |
aactttcactaagtggaagaaattacaggacctctctctaaatacaaggagagtacaattaccactctctcttataaataggagaatacaaactaacaca |
218 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
1234884 |
aactttcactaagtggaagaaattacaggacctctctctaactacaaggagagtacaaataccactctctcttataaataggagaatactaactaacaca |
1234785 |
T |
|
| Q |
219 |
aactaggagaaacctcacaggagaaactaatttttctctctatattttttctctcactactctaaacaagctttacttgttcttgtgttgttactgattt |
318 |
Q |
| |
|
||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1234784 |
aactaggagaaacctcacaggagaaactatttttcctctctatattttttctctcacta-tctaaacaagctttacttgttcttgtgttgttactgattt |
1234686 |
T |
|
| Q |
319 |
gggatg |
324 |
Q |
| |
|
|||||| |
|
|
| T |
1234685 |
gggatg |
1234680 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 275; E-Value: 1e-153
Query Start/End: Original strand, 21 - 323
Target Start/End: Original strand, 27874026 - 27874327
Alignment:
| Q |
21 |
ctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaagagtagagaa |
120 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
27874026 |
ctaaaataagagaagagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaagggaaaaaaccacggggcaagagtagagaa |
27874125 |
T |
|
| Q |
121 |
ctttcactaagtggaagaaattacaggacctctctctaaatacaaggagagtacaattaccactctctcttataaataggagaatacaaactaacacaaa |
220 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27874126 |
ctttcactaagtggaagaaattacaggacctctctctaaatacaaggagagtacaattaccactctctcttataaataggagaatacaaactaacacaaa |
27874225 |
T |
|
| Q |
221 |
ctaggagaaacctcacaggagaaactaatttttctctctatattttttctctcactactctaaacaagctttacttgttcttgtgttgttactgatttgg |
320 |
Q |
| |
|
||||||||||||||||||||||| ||| |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27874226 |
ctaggagaaacctcacaggagaagctatttttcctctctatattttttctctcacta-tctaaacaagctttacttgttcttgtgttgttactgatttgg |
27874324 |
T |
|
| Q |
321 |
gat |
323 |
Q |
| |
|
||| |
|
|
| T |
27874325 |
gat |
27874327 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 19 - 393
Target Start/End: Original strand, 27878743 - 27879134
Alignment:
| Q |
19 |
agctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaagagtagag |
118 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27878743 |
agctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaagagtagag |
27878842 |
T |
|
| Q |
119 |
aactttcactaagtggaagaaattacaggacctctctctaaatacaaggagagtacaattaccactctctcttataaataggagaatacaa--actaaca |
216 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
27878843 |
aactttcactaagtggaagaaattacaggacctctctctaaatacaaggagagtacaattaccactctctcttataaataggagaatacaaacactaaca |
27878942 |
T |
|
| Q |
217 |
caaactaggagaaacctcacaggagaaactaatttttctctctatattttttctctcactactcta-----aacaa---------gctttac-ttgttct |
301 |
Q |
| |
|
| | ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| |||| ||||| | |||| ||||||| |
|
|
| T |
27878943 |
ctacctaggagaaacctcacaggagaaactaatttttctctctatatttttcctctctctattctactaagaacaagtagttgttgtgttactttgttct |
27879042 |
T |
|
| Q |
302 |
tgtgttgttactgatttgggatgagtagaatggtgcaagggacatgctatttataggaccgtaaaagccatgcctcaaccattttcatttat |
393 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||||||||||||| | | || ||||||||| |||||| || ||||||| |
|
|
| T |
27879043 |
ggtgttgttactaatttgggatgagtagaatggtgcaagggacatgctatttatactagtgaaagagccatgccccaaccaattgcatttat |
27879134 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 31 - 273
Target Start/End: Complemental strand, 30966923 - 30966683
Alignment:
| Q |
31 |
agacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaa-aaaaccacggggcaagagtagagaactttcacta |
129 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||| || |||| ||||||||||||||||||||||||||||| |
|
|
| T |
30966923 |
agacgagaaaagaggaactgaacacacaatattt-acgtggaaacccatcaacaaataagggaaataaaatcacggggcaagagtagagaactttcacta |
30966825 |
T |
|
| Q |
130 |
agtggaagaaattacaggacctctctctaaatacaaggagagtacaattaccactctctcttataaataggagaatacaaactaacacaaactaggagaa |
229 |
Q |
| |
|
||||||||||||| ||| |||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||| ||| | | | ||||||||| |
|
|
| T |
30966824 |
agtggaagaaattgcagaacctctctctaaatgcaaggagagtacaattaccactctctcttgtaaatagaagaat----actgaggctacctaggagaa |
30966729 |
T |
|
| Q |
230 |
acctcac-aggagaaactaatt-tttctctctatattttttctctc |
273 |
Q |
| |
|
||||||| || |||||||| || ||||||||||||||||||||||| |
|
|
| T |
30966728 |
acctcacaagtagaaactatttctttctctctatattttttctctc |
30966683 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 135; E-Value: 5e-70
Query Start/End: Original strand, 19 - 260
Target Start/End: Complemental strand, 30986795 - 30986552
Alignment:
| Q |
19 |
agctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaa---cccctcaacaaataaggggaaaaaa--ccacggggcaagag |
113 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| ||||||||||||||||| |||||| |||||||||||||| |
|
|
| T |
30986795 |
agctaaaataagagacgagaaaagaggaactgaacgcacaatattt-acgtggaaagtacccctcaacaaataaggaaaaaaaaaaccacggggcaagag |
30986697 |
T |
|
| Q |
114 |
tagagaactttcactaagtggaagaaattacaggacctctctctaaatacaaggagagtacaattaccactctctcttataaataggagaatacaaacta |
213 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||| ||| |
|
|
| T |
30986696 |
tagagaactttcactaagtggaagaaattgcaggacctctctctaaatgcaaggagagtacaattaccactctctcttgtaaatagaagaat----actg |
30986601 |
T |
|
| Q |
214 |
acacaaactaggagaaacctca-caggagaaactaatt-tttctctcta |
260 |
Q |
| |
|
|||| | ||||||||||||||| ||||||||||| || |||||||||| |
|
|
| T |
30986600 |
acactacctaggagaaacctcatgaggagaaactatttctttctctcta |
30986552 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 19 - 276
Target Start/End: Complemental strand, 18968160 - 18967912
Alignment:
| Q |
19 |
agctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaagagtagag |
118 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18968160 |
agctaaaataagagacgagaaaagaggaactgaatacataatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaagagtagaa |
18968061 |
T |
|
| Q |
119 |
aactttcactaagtggaaga-aattacaggacctctctctaaatacaaggagagtacaattaccactctctcttataaataggagaatacaaactaacac |
217 |
Q |
| |
|
|||||||||||||||||||| ||||||| ||| ||||||||||||||||||||| ||||| | ||||||| | |||||||||||||| ||| |
|
|
| T |
18968060 |
aactttcactaagtggaagacaattacaagacttctctctaaatacaaggagagacaaattagc-ctctctcat-gaaataggagaatactaac------ |
18967969 |
T |
|
| Q |
218 |
aaactaggagaaacctcacaggagaaactaatttttctctctatattttttctctcact |
276 |
Q |
| |
|
|||||||||||||||||| ||||||||| ||| |||| ||||||||| |||||||| |
|
|
| T |
18967968 |
--actaggagaaacctcacaagagaaactatatttcctctttatatttttcctctcact |
18967912 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 35 - 176
Target Start/End: Complemental strand, 21966816 - 21966677
Alignment:
| Q |
35 |
gagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaagagtagagaactttcactaagtgg |
134 |
Q |
| |
|
||||||||||||||| |||| | ||||||| | ||||||||||||||| |||||| |||||||| | | ||||||||||||||||||||||||||| ||| |
|
|
| T |
21966816 |
gagaaaagaggaactaaacataaaatattt-atgtggaaacccctcaataaataaagggaaaaatc-atggggcaagagtagagaactttcactaaatgg |
21966719 |
T |
|
| Q |
135 |
aagaaattacaggacctctctctaaatacaaggagagtacaa |
176 |
Q |
| |
|
||||||||| | ||||||||||||| | ||| |||||||||| |
|
|
| T |
21966718 |
aagaaattataagacctctctctaatttcaaagagagtacaa |
21966677 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 21 - 153
Target Start/End: Original strand, 23012537 - 23012667
Alignment:
| Q |
21 |
ctaaaataagagacgagaaaa-gaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaagagtagaga |
119 |
Q |
| |
|
||||||||||||||||||||| || ||| |||||||||| ||||| |||||||||| | ||| || |||||||||||| ||| ||| |||||||||||| |
|
|
| T |
23012537 |
ctaaaataagagacgagaaaaagaagaattgaacacacattattt-acgtggaaactcgtcacaaattaaggggaaaaa-ccatggg-caagagtagaga |
23012633 |
T |
|
| Q |
120 |
actttcactaagtggaagaaattacaggacctct |
153 |
Q |
| |
|
|||||||||||||| ||||||| || ||||||| |
|
|
| T |
23012634 |
actttcactaagtgagagaaatttcaagacctct |
23012667 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 278; Significance: 1e-155; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 19 - 324
Target Start/End: Original strand, 9439406 - 9439710
Alignment:
| Q |
19 |
agctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaagagtagag |
118 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9439406 |
agctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaagagtagag |
9439505 |
T |
|
| Q |
119 |
aactttcactaagtggaagaaattacaggacctctctctaaatacaaggagagtacaattaccactctctcttataaataggagaatacaaactaacaca |
218 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
9439506 |
aactttcactaagtggaagaaattacaggacctctctctaactacaaggagagtacaaataccactctctcttataaataggagaatactaactaacaca |
9439605 |
T |
|
| Q |
219 |
aactaggagaaacctcacaggagaaactaatttttctctctatattttttctctcactactctaaacaagctttacttgttcttgtgttgttactgattt |
318 |
Q |
| |
|
||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9439606 |
aactaggagaaacctcacaggagaaactatttttcctctctatattttttctctcacta-tctaaacaagctttacttgttcttgtgttgttactgattt |
9439704 |
T |
|
| Q |
319 |
gggatg |
324 |
Q |
| |
|
|||||| |
|
|
| T |
9439705 |
gggatg |
9439710 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 19 - 324
Target Start/End: Original strand, 9444126 - 9444430
Alignment:
| Q |
19 |
agctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaagagtagag |
118 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9444126 |
agctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaagagtagag |
9444225 |
T |
|
| Q |
119 |
aactttcactaagtggaagaaattacaggacctctctctaaatacaaggagagtacaattaccactctctcttataaataggagaatacaaactaacaca |
218 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
9444226 |
aactttcactaagtggaagaaattacaggacctctctctaactacaaggagagtacaaataccactctctcttataaataggagaatactaactaacaca |
9444325 |
T |
|
| Q |
219 |
aactaggagaaacctcacaggagaaactaatttttctctctatattttttctctcactactctaaacaagctttacttgttcttgtgttgttactgattt |
318 |
Q |
| |
|
||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9444326 |
aactaggagaaacctcacaggagaaactatttttcctctctatattttttctctcacta-tctaaacaagctttacttgttcttgtgttgttactgattt |
9444424 |
T |
|
| Q |
319 |
gggatg |
324 |
Q |
| |
|
|||||| |
|
|
| T |
9444425 |
gggatg |
9444430 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 166; Significance: 1e-88; HSPs: 6)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 19 - 276
Target Start/End: Original strand, 16183665 - 16183913
Alignment:
| Q |
19 |
agctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaagagtagag |
118 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16183665 |
agctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaagagtagag |
16183764 |
T |
|
| Q |
119 |
aactttcactaagtggaaga-aattacaggacctctctctaaatacaaggagagtacaattaccactctctcttataaataggagaatacaaactaacac |
217 |
Q |
| |
|
|||||||||||||||||||| ||||||| ||||||||||||||||||||||||| ||||||| ||||||||| |||||||||||||| ||| |
|
|
| T |
16183765 |
aactttcactaagtggaagacaattacaagacctctctctaaatacaaggagagacaaattacc-ctctctctt-gaaataggagaatactaac------ |
16183856 |
T |
|
| Q |
218 |
aaactaggagaaacctcacaggagaaactaatttttctctctatattttttctctcact |
276 |
Q |
| |
|
|||||||||||||||||||||||||||| ||| |||||||||||||| |||||||| |
|
|
| T |
16183857 |
--actaggagaaacctcacaggagaaactatatttcctctctatatttttcctctcact |
16183913 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 150; E-Value: 5e-79
Query Start/End: Original strand, 19 - 282
Target Start/End: Complemental strand, 30235305 - 30235038
Alignment:
| Q |
19 |
agctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaa-ccacggggcaagagtaga |
117 |
Q |
| |
|
||||||||||| | | |||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||| ||||||| ||||||||| |
|
|
| T |
30235305 |
agctaaaataaaaaatgagaaaagaggaactgaacacacaatattt-acgtggaaacccctcaacgaataaggggaaaaaaaccacgggataagagtaga |
30235207 |
T |
|
| Q |
118 |
gaactttcactaagtggaagaaattacaggacctctctc-taaatacaaggagagtacaattaccactctctcttataaataggagaatacaa--actaa |
214 |
Q |
| |
|
|||||||| ||| | ||||||||||||||||||||||| || || |||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
30235206 |
aaactttcaataactagaagaaattacaggacctctctcctatttataaggagagtacaattaccactctctcttataaataggagaatacaaacactaa |
30235107 |
T |
|
| Q |
215 |
cacaaactaggagaaacctca-caggagaaactaatttttctctctatattttttctctcactactcta |
282 |
Q |
| |
|
||| | || ||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
30235106 |
cactacgtaagagaaacctcataaggagaaactaatttttctctctatatttttcctctcactactcta |
30235038 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 19 - 207
Target Start/End: Original strand, 8139998 - 8140183
Alignment:
| Q |
19 |
agctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaagagtagag |
118 |
Q |
| |
|
||||||||||||||| |||||||||| |||||||| |||||||||| | ||||||||||||||||||||||||||| ||||||| |||| |||| |||| |
|
|
| T |
8139998 |
agctaaaataagagatgagaaaagagaaactgaacgcacaatattt-atgtggaaacccctcaacaaataaggggagaaaaccatggggtaagattagaa |
8140096 |
T |
|
| Q |
119 |
aactttcactaagtggaagaaattacaggacctctctctaaatacaaggagagtacaattaccactctctcttataaataggagaatac |
207 |
Q |
| |
|
|||||||||| |||||||||||||| | ||||||||||| ||||||||||||| ||||||| ||||||||| |||||||||||||| |
|
|
| T |
8140097 |
aactttcactcagtggaagaaattataagacctctctcttaatacaaggagagacaaattacc-ctctctctt-gaaataggagaatac |
8140183 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 19 - 171
Target Start/End: Original strand, 8138494 - 8138645
Alignment:
| Q |
19 |
agctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaagagtagag |
118 |
Q |
| |
|
||||||||||||||||||||||||| |||| |||||||| || || | |||||||||||| |||||| ||||||| ||||||||| ||||||| ||||| |
|
|
| T |
8138494 |
agctaaaataagagacgagaaaagaaaaacttaacacacagtaatt-atgtggaaaccccttaacaaacaaggggagaaaaccacgaggcaagattagag |
8138592 |
T |
|
| Q |
119 |
aactttcactaagtggaagaaattacaggacctctctctaaatacaaggagag |
171 |
Q |
| |
|
|||||||||||| |||||||||||||| |||||| |||||||||||||||||| |
|
|
| T |
8138593 |
aactttcactaaatggaagaaattacaagacctccctctaaatacaaggagag |
8138645 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 21 - 100
Target Start/End: Original strand, 36528451 - 36528529
Alignment:
| Q |
21 |
ctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaac |
100 |
Q |
| |
|
||||||||||||| ||||| ||||||| ||||||||||||| |||||||||||||||||| || ||||||| ||||||| |
|
|
| T |
36528451 |
ctaaaataagagatgagaatagaggaattgaacacacaata-tttacgtggaaacccctccacgaataaggaaaaaaaac |
36528529 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 71 - 143
Target Start/End: Original strand, 5102678 - 5102749
Alignment:
| Q |
71 |
gaaacccctcaacaaataaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaatta |
143 |
Q |
| |
|
|||| ||||||||||||||||||||||| ||| || ||||||||||| |||||| ||||||||| |||||||| |
|
|
| T |
5102678 |
gaaaaccctcaacaaataaggggaaaaa-ccatggagcaagagtagataacttttactaagtgggagaaatta |
5102749 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0074 (Bit Score: 146; Significance: 1e-76; HSPs: 1)
Name: scaffold0074
Description:
Target: scaffold0074; HSP #1
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 19 - 276
Target Start/End: Original strand, 27260 - 27508
Alignment:
| Q |
19 |
agctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaagagtagag |
118 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27260 |
agctaaaataagagacgagaaaagagaaactgaacacacaatactttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaagagtagag |
27359 |
T |
|
| Q |
119 |
aactttcactaagtggaaga-aattacaggacctctctctaaatacaaggagagtacaattaccactctctcttataaataggagaatacaaactaacac |
217 |
Q |
| |
|
|||||||||||||||||||| ||||||| || ||||||||||||||||||||| |||||||| |||||||| ||||||| |||||| ||| |
|
|
| T |
27360 |
aactttcactaagtggaagacaattacaatacttctctctaaatacaaggagagacaaattacca-tctctctt-gaaataggtgaatactaac------ |
27451 |
T |
|
| Q |
218 |
aaactaggagaaacctcacaggagaaactaatttttctctctatattttttctctcact |
276 |
Q |
| |
|
|||||||||||||||||||||||||||| ||| |||||||||||||| |||||||| |
|
|
| T |
27452 |
--actaggagaaacctcacaggagaaactatatttcctctctatatttttcctctcact |
27508 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 143; Significance: 8e-75; HSPs: 4)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 143; E-Value: 8e-75
Query Start/End: Original strand, 19 - 276
Target Start/End: Complemental strand, 46191512 - 46191266
Alignment:
| Q |
19 |
agctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaagagtagag |
118 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
46191512 |
agctaaaataagagacgagaaaagaggaactgaacaca--atattttacgtggaaacccctcaacaaataaggggaaaaaaccacgggacaagagtagag |
46191415 |
T |
|
| Q |
119 |
aactttcactaagtggaaga-aattacaggacctctctctaaatacaaggagagtacaattaccactctctcttataaataggagaatacaaactaacac |
217 |
Q |
| |
|
|||||||||||||||||||| ||||||| ||| |||||||||||| |||||||| ||||||| ||||||||| |||||||||||||| ||| |
|
|
| T |
46191414 |
aactttcactaagtggaagacaattacaagacttctctctaaatagaaggagagacaaattacc-ctctctctt-gaaataggagaatactaac------ |
46191323 |
T |
|
| Q |
218 |
aaactaggagaaacctcacaggagaaactaatttttctctctatattttttctctcact |
276 |
Q |
| |
|
|||||||||||||||||||||||||||| ||| |||||||||||||| |||||||| |
|
|
| T |
46191322 |
--actaggagaaacctcacaggagaaactatatttcctctctatatttttcctctcact |
46191266 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 19 - 171
Target Start/End: Original strand, 30697149 - 30697300
Alignment:
| Q |
19 |
agctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaagagtagag |
118 |
Q |
| |
|
|||||| |||||||||||||||||||||||| |||||| ||||||| ||||||||||||||||||||||||||||||||| ||||| ||||||||||||| |
|
|
| T |
30697149 |
agctaacataagagacgagaaaagaggaacttaacacaaaatattt-acgtggaaacccctcaacaaataaggggaaaaagccacgtggcaagagtagag |
30697247 |
T |
|
| Q |
119 |
aactttcactaagtggaagaaattacaggacctctctctaaatacaaggagag |
171 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||| ||||||||||||||||| |
|
|
| T |
30697248 |
aactttcactaagtggaagaaattacaagacctctttctaaatacaaggagag |
30697300 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 21 - 171
Target Start/End: Complemental strand, 4130365 - 4130215
Alignment:
| Q |
21 |
ctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaagagtagagaa |
120 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||| |||| ||||||||| |||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
4130365 |
ctaaaataagtgacgagaaaagaggaactgaacacacaaaattt-acgtggaaatccctcaacaaataaagggaaaaaaccacggggcaagagtagagaa |
4130267 |
T |
|
| Q |
121 |
ctttcactaagtggaaga-aattacaggacctctctctaaatacaaggagag |
171 |
Q |
| |
|
|||||||||||||||||| ||||||| ||| ||||||||||||||||||||| |
|
|
| T |
4130266 |
ctttcactaagtggaagataattacaagacttctctctaaatacaaggagag |
4130215 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 127 - 207
Target Start/End: Original strand, 30674787 - 30674865
Alignment:
| Q |
127 |
ctaagtggaagaaattacaggacctctctctaaatacaaggagagtacaattaccactctctcttataaataggagaatac |
207 |
Q |
| |
|
||||||||||||||||| | ||||||| ||||| | |||||||| ||||||| || |||||||| | ||||||||||||| |
|
|
| T |
30674787 |
ctaagtggaagaaattatacaacctctcactaaaaataaggagagaacaatta-cattctctcttgt-aataggagaatac |
30674865 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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