View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8406_low_9 (Length: 246)

Name: NF8406_low_9
Description: NF8406
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8406_low_9
NF8406_low_9
[»] chr5 (16 HSPs)
chr5 (1-225)||(24885389-24885605)
chr5 (1-225)||(28760216-28760441)
chr5 (1-206)||(21391417-21391621)
chr5 (47-227)||(19569767-19569947)
chr5 (1-225)||(24163425-24163657)
chr5 (48-201)||(21216614-21216767)
chr5 (135-203)||(25936402-25936468)
chr5 (127-203)||(24838550-24838625)
chr5 (126-212)||(30608435-30608520)
chr5 (151-206)||(18304280-18304335)
chr5 (126-213)||(22825981-22826067)
chr5 (151-217)||(24492604-24492670)
chr5 (127-206)||(6999104-6999183)
chr5 (127-203)||(31730392-31730467)
chr5 (121-204)||(26013559-26013641)
chr5 (121-225)||(9824093-9824197)
[»] chr7 (16 HSPs)
chr7 (1-225)||(19414386-19414609)
chr7 (15-176)||(4876196-4876356)
chr7 (25-225)||(10983887-10984090)
chr7 (15-225)||(2641845-2642054)
chr7 (47-227)||(2277945-2278125)
chr7 (48-206)||(17915355-17915512)
chr7 (97-221)||(17918543-17918667)
chr7 (130-212)||(17891532-17891613)
chr7 (127-212)||(1777248-1777332)
chr7 (17-213)||(19842635-19842834)
chr7 (127-199)||(5265099-5265170)
chr7 (126-206)||(19142099-19142178)
chr7 (126-206)||(20741498-20741577)
chr7 (154-225)||(19142931-19143002)
chr7 (154-225)||(20742330-20742401)
chr7 (151-206)||(27707504-27707559)
[»] chr8 (11 HSPs)
chr8 (15-221)||(5828640-5828846)
chr8 (15-221)||(5826041-5826247)
chr8 (15-205)||(23433104-23433290)
chr8 (127-225)||(24987608-24987706)
chr8 (15-132)||(18565768-18565881)
chr8 (15-121)||(5825640-5825746)
chr8 (48-225)||(13645034-13645213)
chr8 (48-225)||(13745459-13745638)
chr8 (127-203)||(18565024-18565099)
chr8 (127-190)||(20266058-20266121)
chr8 (127-190)||(21052687-21052750)
[»] chr1 (10 HSPs)
chr1 (6-225)||(9756700-9756920)
chr1 (54-219)||(22638085-22638251)
chr1 (121-225)||(24006406-24006510)
chr1 (127-205)||(26897898-26897975)
chr1 (151-213)||(17496820-17496882)
chr1 (151-217)||(15440575-15440639)
chr1 (151-213)||(17316558-17316620)
chr1 (154-206)||(12397682-12397734)
chr1 (151-205)||(31584499-31584553)
chr1 (137-213)||(33438780-33438855)
[»] chr2 (7 HSPs)
chr2 (1-204)||(16197647-16197850)
chr2 (47-205)||(8685429-8685587)
chr2 (15-204)||(26653543-26653729)
chr2 (151-206)||(21548476-21548531)
chr2 (151-204)||(26654874-26654927)
chr2 (90-221)||(16152378-16152509)
chr2 (158-227)||(17417596-17417665)
[»] scaffold0300 (1 HSPs)
scaffold0300 (1-225)||(11829-12054)
[»] chr6 (9 HSPs)
chr6 (1-158)||(20396679-20396836)
chr6 (16-212)||(19731230-19731427)
chr6 (47-223)||(17208785-17208963)
chr6 (15-83)||(34659733-34659797)
chr6 (135-212)||(10814962-10815038)
chr6 (129-213)||(4312221-4312304)
chr6 (137-225)||(21688961-21689049)
chr6 (126-201)||(18615418-18615492)
chr6 (151-212)||(4097943-4098004)
[»] chr4 (7 HSPs)
chr4 (47-204)||(22316884-22317041)
chr4 (49-225)||(8911412-8911585)
chr4 (154-204)||(18445803-18445853)
chr4 (134-203)||(4746429-4746497)
chr4 (151-212)||(11449568-11449629)
chr4 (162-212)||(19555491-19555541)
chr4 (126-206)||(19053054-19053133)
[»] scaffold0032 (1 HSPs)
scaffold0032 (10-206)||(79079-79270)
[»] chr3 (13 HSPs)
chr3 (17-221)||(21318192-21318398)
chr3 (21-225)||(13178027-13178229)
chr3 (21-201)||(13340949-13341127)
chr3 (118-206)||(11829695-11829786)
chr3 (127-203)||(17034635-17034710)
chr3 (127-217)||(19307106-19307195)
chr3 (151-225)||(21528244-21528318)
chr3 (121-225)||(9323448-9323552)
chr3 (158-217)||(16199203-16199262)
chr3 (148-203)||(19905611-19905666)
chr3 (126-212)||(13291866-13291952)
chr3 (120-201)||(15331496-15331576)
chr3 (127-203)||(27406131-27406206)
[»] scaffold0711 (1 HSPs)
scaffold0711 (98-227)||(1782-1911)
[»] scaffold0068 (1 HSPs)
scaffold0068 (97-213)||(57101-57223)
[»] scaffold0062 (1 HSPs)
scaffold0062 (66-225)||(2386-2545)
[»] scaffold0002 (1 HSPs)
scaffold0002 (21-225)||(128759-128961)
[»] scaffold0041 (1 HSPs)
scaffold0041 (15-225)||(26197-26405)
[»] scaffold0527 (2 HSPs)
scaffold0527 (129-225)||(623-719)
scaffold0527 (129-225)||(8686-8782)
[»] scaffold0298 (2 HSPs)
scaffold0298 (1-59)||(13845-13903)
scaffold0298 (1-59)||(17615-17673)


Alignment Details
Target: chr5 (Bit Score: 164; Significance: 9e-88; HSPs: 16)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 164; E-Value: 9e-88
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 24885605 - 24885389
Alignment:
Q  1 ctttttaactagtgagtgtaaactgaacaaataaacggactcacttcttaggatttctaagatataaacttgtaaataaatcccaactatttttctctat 100  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||    
T  24885605 ctttttaactagtgagtgtaaactgaacaaataaacagactcacttcttaggatttctaagatataaacttgaaaataaatcccaactgtttttctctat 24885506  T
Q  101 ttgatttgatagaattttggcacagaaaaatatcagagtcttgttacttattcttcaggtcttcagctccttttataggcaatgatttgatagacgttgg 200  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||| ||||    
T  24885505 ttgatttgatagaattttggtacagaaaaatatcagagtcttgttacttattct--------tcagctccttttataggcaatgatttgatagactttgg 24885414  T
Q  201 agaagattgtcagtgcaaatagagt 225  Q
    ||||||||  ||| |||||||||||    
T  24885413 agaagatttccagagcaaatagagt 24885389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 28760216 - 28760441
Alignment:
Q  1 ctttttaactagtgagtgtaaactgaacaaataaacggactcacttcttaggatttctaagatataaacttgtaaataaatccc-aactatttttctcta 99  Q
    |||| |||||||||||| | |||||||||||| ||| |||||||| |||| ||||||||||||||||||||| |||  |||||  || | |||| | |||    
T  28760216 ctttctaactagtgagtatgaactgaacaaatgaacagactcactccttaagatttctaagatataaacttgaaaaataatccttaagtgttttgcgcta 28760315  T
Q  100 tttgatttgatagaattttggcacagaaaaatatcagagtcttgttacttattcttcaggtcttcagctccttttataggcaatgatttgatagacgttg 199  Q
    |||||||||| | | |||| ||||||||||||||||||||||||||  || ||||||| |||||||| | ||||||||||||||||||||| ||||||||    
T  28760316 tttgatttgacaaagttttcgcacagaaaaatatcagagtcttgttgtttcttcttcaagtcttcagttgcttttataggcaatgatttgagagacgttg 28760415  T
Q  200 gagaagattgtcagtgcaaatagagt 225  Q
    ||||||| |||||  |||||||||||    
T  28760416 gagaagagtgtcatcgcaaatagagt 28760441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 21391621 - 21391417
Alignment:
Q  1 ctttttaactagtgagtgtaaactgaacaaataaacggactcacttcttaggatttctaagatataaacttgtaaataaatcccaactatttttctctat 100  Q
    |||| |||||| |||||||||||||||||||| |||  ||||||| |||||||||||||||||||||||||| |||  ||||  || | |||| | ||||    
T  21391621 ctttctaactactgagtgtaaactgaacaaatgaacaaactcactccttaggatttctaagatataaacttgaaaaataatcataatt-ttttgcgctat 21391523  T
Q  101 ttgatttgatagaattttggcacagaaaaatatcagagtcttgttacttattcttcaggtcttcagctccttttataggcaatgatttgatagacgttgg 200  Q
    ||||||| | ||| || ||||||||||||||| |||||||||||| ||| ||||||||||| |||||||| |||||||||||||| |||| |||||||||    
T  21391522 ttgatttaacagagttgtggcacagaaaaatagcagagtcttgttgcttcttcttcaggtcgtcagctccatttataggcaatgacttgagagacgttgg 21391423  T
Q  201 agaaga 206  Q
    ||||||    
T  21391422 agaaga 21391417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 47 - 227
Target Start/End: Complemental strand, 19569947 - 19569767
Alignment:
Q  47 cttaggatttctaagatataaacttgtaaataaatcccaactatttttctctatttgatttgatagaattttggcacagaaaaatatcagagtcttgtta 146  Q
    |||||||||| ||||||||| ||||| ||||| ||||||| | |||| | ||||||||||||| ||| |  || ||||| ||||||  ||||||||||||    
T  19569947 cttaggatttttaagatatagacttgaaaatatatcccaagtgttttgcactatttgatttgacagagtaatgacacagtaaaatagtagagtcttgtta 19569848  T
Q  147 cttattcttcaggtcttcagctccttttataggcaatgatttgatagacgttggagaagattgtcagtgcaaatagagttg 227  Q
    ||| || |||||||||||| || ||| |||||| | |||||||| |||||||| |||||| |||||||| |||||||||||    
T  19569847 cttctttttcaggtcttcaacttcttatataggtagtgatttgagagacgttgaagaagagtgtcagtgaaaatagagttg 19569767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 24163425 - 24163657
Alignment:
Q  1 ctttttaactagtgagtgtaaactgaacaaataaacggactcacttcttaggatttctaagatataaacttgtaaataaatcccaactattttt-ctcta 99  Q
    |||||||||||||||| ||||||||||||||| |||  ||||||| |||||||||||||| ||||||||||| |||| ||||| || | ||||| | |||    
T  24163425 ctttttaactagtgagggtaaactgaacaaatgaactaactcactccttaggatttctaatatataaacttg-aaat-aatcctaagtgtttttgcacta 24163522  T
Q  100 tttgatttgatagaattttggcacagaaaaatatcagagtcttgttac---------ttattcttcaggtcttcagctccttttataggcaatgatttga 190  Q
    |||| ||||| ||| |||| ||||||||||||| || ||||||||| |         || |||||||  ||||||||||||| |||||||  ||||||||    
T  24163523 tttgttttgacagagttttcgcacagaaaaataacatagtcttgttgcttcttatttttcttcttcaaatcttcagctccttatataggcgttgatttga 24163622  T
Q  191 tagacgttggagaagattgtcagtgcaaatagagt 225  Q
     ||||||||||||| | |||||   ||||||||||    
T  24163623 gagacgttggagaaaagtgtcatcacaaatagagt 24163657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 48 - 201
Target Start/End: Complemental strand, 21216767 - 21216614
Alignment:
Q  48 ttaggatttctaagatataaacttgtaaataaatcccaactatttttctctatttgatttgatagaattttggcacagaaaaatatcagagtcttgttac 147  Q
    ||||||||||||||||||||||||| |||||||||| |  | |||| |  |||||||||||| ||| |  |||||||| ||||||  |||||||| ||||    
T  21216767 ttaggatttctaagatataaacttgaaaataaatcctaggtgttttgcgttatttgatttgacagagtaatggcacaggaaaatagtagagtcttattac 21216668  T
Q  148 ttattcttcaggtcttcagctccttttataggcaatgatttgatagacgttgga 201  Q
    || |||||  |||||||| ||||||||||| |||||||||| | ||||||||||    
T  21216667 ttcttctttgggtcttcaactccttttatatgcaatgatttaagagacgttgga 21216614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 135 - 203
Target Start/End: Complemental strand, 25936468 - 25936402
Alignment:
Q  135 agagtcttgttacttattcttcaggtcttcagctccttttataggcaatgatttgatagacgttggaga 203  Q
    |||||||||||  |||||||||| |||||||||||||| ||||||||| ||||||| ||||||||||||    
T  25936468 agagtcttgtt--ttattcttcaagtcttcagctccttatataggcaaggatttgagagacgttggaga 25936402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 127 - 203
Target Start/End: Complemental strand, 24838625 - 24838550
Alignment:
Q  127 aaaatatcagagtcttgttacttattcttcaggtcttcagctccttttataggcaatgatttgatagacgttggaga 203  Q
    |||||| |||| |||||||| ||| |||| |||||||||||||||| ||||||||| ||||||| ||||||||||||    
T  24838625 aaaatagcagattcttgtta-ttactcttaaggtcttcagctccttatataggcaaagatttgagagacgttggaga 24838550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 126 - 212
Target Start/End: Complemental strand, 30608520 - 30608435
Alignment:
Q  126 aaaaatatcagagtcttgttacttattcttcaggtcttcagctccttttataggcaatgatttgatagacgttggagaagattgtca 212  Q
    ||||||| ||||||||||||  |  ||||||||||||||||||| |||||||||||  ||||||| ||||| ||||||||| |||||    
T  30608520 aaaaatagcagagtcttgttgatc-ttcttcaggtcttcagctcattttataggcagggatttgagagacgatggagaagagtgtca 30608435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 206
Target Start/End: Original strand, 18304280 - 18304335
Alignment:
Q  151 ttcttcaggtcttcagctccttttataggcaatgatttgatagacgttggagaaga 206  Q
    |||||||||||||||  |||||||||| ||| |||||||| |||||||||||||||    
T  18304280 ttcttcaggtcttcatgtccttttatatgcagtgatttgagagacgttggagaaga 18304335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 213
Target Start/End: Original strand, 22825981 - 22826067
Alignment:
Q  126 aaaaatatcagagtcttgttacttattcttcaggtcttcagctccttttataggcaatgatttgatagacgttggagaagattgtcag 213  Q
    ||||||| |||||| |||||| || ||||||| | |||||||||||| ||||||||| ||||||| ||| ||| ||||||| ||||||    
T  22825981 aaaaatagcagagtgttgtta-ttgttcttcaagccttcagctccttatataggcaaggatttgaaagatgtttgagaagaatgtcag 22826067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 151 - 217
Target Start/End: Complemental strand, 24492670 - 24492604
Alignment:
Q  151 ttcttcaggtcttcagctccttttataggcaatgatttgatagacgttggagaagattgtcagtgca 217  Q
    |||||||||| |||| |||||||||||||||  ||||||| ||||||| ||||||| ||||| ||||    
T  24492670 ttcttcaggtattcaactccttttataggcagggatttgagagacgttcgagaagagtgtcattgca 24492604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 206
Target Start/End: Complemental strand, 6999183 - 6999104
Alignment:
Q  127 aaaatatcagagtcttgttacttattcttca-ggtcttcagctccttttataggcaatgatttgatagacgttggagaaga 206  Q
    |||||| ||||||||||||| |  ||||||| ||||||| ||||||| ||||||||  ||||||| |||||||||||||||    
T  6999183 aaaatagcagagtcttgttaatc-ttcttcatggtcttctgctccttatataggcagggatttgagagacgttggagaaga 6999104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 203
Target Start/End: Original strand, 31730392 - 31730467
Alignment:
Q  127 aaaatatcagagtcttgttacttattcttcaggtcttcagctccttttataggcaatgatttgatagacgttggaga 203  Q
    |||||| || |||||||||| | ||| |||| |||||| ||||||| ||||||||| ||||||| ||||||||||||    
T  31730392 aaaatagcaaagtcttgtta-taattgttcaagtcttcggctccttatataggcaaagatttgagagacgttggaga 31730467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 121 - 204
Target Start/End: Original strand, 26013559 - 26013641
Alignment:
Q  121 cacagaaaaatatcagagtcttgttacttattcttcaggtcttcagctccttttataggcaatgatttgatagacgttggagaa 204  Q
    ||||| |||||| ||||||||| ||| || ||||||||  ||||| |||||| |||| |||| ||||||| |||||||||||||    
T  26013559 cacagtaaaatagcagagtcttattattt-ttcttcagaacttcaactccttctataagcaaggatttgaaagacgttggagaa 26013641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 121 - 225
Target Start/End: Original strand, 9824093 - 9824197
Alignment:
Q  121 cacagaaaaatatcagagtcttgttacttattcttcag-gtcttcagctccttttataggcaatgatttgatagacgttggagaagattgtcagtgcaaa 219  Q
    ||||| |||||||||||| ||||||| || ||||||   |||||||||||||| |||||| |  ||||||| ||| |||| |||||| || ||| |||||    
T  9824093 cacagtaaaatatcagagacttgtta-ttcttcttcgtcgtcttcagctccttatataggtagggatttgagagatgttgaagaagagtgccagcgcaaa 9824191  T
Q  220 tagagt 225  Q
    ||||||    
T  9824192 tagagt 9824197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 105; Significance: 1e-52; HSPs: 16)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 19414386 - 19414609
Alignment:
Q  1 ctttttaactagtgagtgtaaactgaacaaataaacggactcacttcttaggatttctaagatataaacttgtaaataaatcccaactatttttctctat 100  Q
    |||| ||||||||||||||||||||||||||| ||| |||||||| |||||||||||||||||||||||||| |||||| |||  | | |||| | ||||    
T  19414386 ctttctaactagtgagtgtaaactgaacaaatgaacagactcactccttaggatttctaagatataaacttgaaaataa-tccttagtgttttgcgctat 19414484  T
Q  101 ttgatttgatagaattttggcacagaaaaatatcagagtcttgttacttattcttcaggtcttcagctccttttataggcaatgatttgatagacgttgg 200  Q
    ||||  ||| ||| ||||| |||||||||||||| |||||||||| ||| |||||||||||||||||| ||||||||| || |||||||| ||||||||     
T  19414485 ttgacatgacagagttttgacacagaaaaatatctgagtcttgttgcttcttcttcaggtcttcagcttcttttatagacagtgatttgagagacgttga 19414584  T
Q  201 agaagattgtcagtgcaaatagagt 225  Q
    |||||| ||  || |||||||||||    
T  19414585 agaagagtgcaagcgcaaatagagt 19414609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 15 - 176
Target Start/End: Original strand, 4876196 - 4876356
Alignment:
Q  15 agtgtaaactgaacaaataaacggactcacttcttaggatttctaagatataaacttgtaaataaatcccaactatttttctctatttgatttgatagaa 114  Q
    |||||||||||||||||| |||  ||||||| ||||||||||||||||||||||||||||||||||||| || | || | |  |||||||||||  |||     
T  4876196 agtgtaaactgaacaaatgaacatactcactccttaggatttctaagatataaacttgtaaataaatcctaagtgttctgcgttatttgatttg-cagag 4876294  T
Q  115 ttttggcacagaaaaatatcagagtcttgttacttattcttcaggtcttcagctccttttat 176  Q
    |||||||||||||||||| || ||||||||| ||| ||||||| ||||||||||||||||||    
T  4876295 ttttggcacagaaaaatagcaaagtcttgttgcttcttcttcaagtcttcagctccttttat 4876356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 25 - 225
Target Start/End: Complemental strand, 10984090 - 10983887
Alignment:
Q  25 gaacaaataaacggactcacttcttaggatttctaagatataaacttgtaaataaa---tcccaactatttttctctatttgatttgatagaattttggc 121  Q
    |||||||| |||  |||||||  ||||||||||||||||||||||||| ||| |||   || | ||| |||| |  |||||||||||| | | |||||||    
T  10984090 gaacaaatgaacaaactcactctttaggatttctaagatataaacttgaaaaaaaaaaatcactactgttttgcattatttgatttgacaaagttttggc 10983991  T
Q  122 acagaaaaatatcagagtcttgttacttattcttcaggtcttcagctccttttataggcaatgatttgatagacgttggagaagattgtcagtgcaaata 221  Q
    ||| ||||||| |||||||||||| ||| |||||||| ||||||||  |||||||||| | |||||||| ||||||||||||||| |||||| |||||||    
T  10983990 acaaaaaaatagcagagtcttgttgctttttcttcagatcttcagcatcttttataggtagtgatttgagagacgttggagaagaatgtcagcgcaaata 10983891  T
Q  222 gagt 225  Q
    ||||    
T  10983890 gagt 10983887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 15 - 225
Target Start/End: Complemental strand, 2642054 - 2641845
Alignment:
Q  15 agtgtaaactgaacaaataaacggactcacttcttaggatttctaagatataaacttgtaaataaatcccaactatttttctctatttgatttgatagaa 114  Q
    |||||||| ||||||||| |||  |||||   |||||||||||||||||||||||||| |||||||||  || | ||||   ||||||||||||| |||     
T  2642054 agtgtaaattgaacaaatgaacaaactcaacccttaggatttctaagatataaacttgaaaataaatcttaagtgttttgagctatttgatttgacagag 2641955  T
Q  115 ttttggcacagaaaaatatcagagtcttgttacttattcttcaggtc-ttcagctccttttataggcaatgatttgatagacgttggagaagattgtcag 213  Q
    ||||||||||||||||||    | ||||||||||| ||||| ||||| ||||||| || ||||| ||| |||||||| |||||||| |||||| ||| ||    
T  2641954 ttttggcacagaaaaata--gtaatcttgttacttcttctttaggtctttcagcttctcttatatgcagtgatttgagagacgttgaagaagagtgttag 2641857  T
Q  214 tgcaaatagagt 225  Q
    ||||||||||||    
T  2641856 tgcaaatagagt 2641845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 47 - 227
Target Start/End: Original strand, 2277945 - 2278125
Alignment:
Q  47 cttaggatttctaagatataaacttgtaaataaatcccaactatttttctctatttgatttgatagaattttggcacagaaaaatatcagagtcttgtta 146  Q
    |||| |||||| |||||||||||||| |||||||||   | |  | | | ||||||||||||| | | |  ||||| || ||||||  | ||||||||||    
T  2277945 cttatgatttccaagatataaacttggaaataaatcttgagttatctgccctatttgatttgagaaagtaatggcatagtaaaatagtaaagtcttgtta 2278044  T
Q  147 cttattcttcaggtcttcagctccttttataggcaatgatttgatagacgttggagaagattgtcagtgcaaatagagttg 227  Q
    ||| ||||||| |||||||||| ||| |||| ||| |||||||| ||||||||||||||| ||||||||||||||||||||    
T  2278045 cttcttcttcatgtcttcagcttcttatatatgcagtgatttgagagacgttggagaagagtgtcagtgcaaatagagttg 2278125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 48 - 206
Target Start/End: Original strand, 17915355 - 17915512
Alignment:
Q  48 ttaggatttctaagatataaacttgtaaataaatcccaactatttttctctatttgatttgatagaattttggcacagaaaaatatcagagtcttgttac 147  Q
    |||||||||||||||||| || ||| |||||||||  || |||||| | ||||| ||||||| ||| |  |||||||  ||||||||||||| |||||||    
T  17915355 ttaggatttctaagatatgaa-ttgaaaataaatcataagtattttgcgctattagatttgacagagtaatggcacaataaaatatcagagttttgttac 17915453  T
Q  148 ttattcttcaggtcttcagctccttttataggcaatgatttgatagacgttggagaaga 206  Q
    || || |||||||||||| ||||||| ||||||| |||||||| |||  ||||||||||    
T  17915454 ttctttttcaggtcttcaactcctttgataggcagtgatttgagagatattggagaaga 17915512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 97 - 221
Target Start/End: Original strand, 17918543 - 17918667
Alignment:
Q  97 ctatttgatttgatagaattttggcacagaaaaatatcagagtcttgttacttattcttcaggtcttcagctccttttataggcaatgatttgatagacg 196  Q
    ||||| ||||||||||| |  ||||| ||||||||| |||||||||||||||| |||||||| |||||| |||||| ||| |||| | |||||| |||      
T  17918543 ctattagatttgatagagtaatggcatagaaaaataacagagtcttgttacttcttcttcagatcttcaactccttatatgggcagtaatttgagagata 17918642  T
Q  197 ttggagaagattgtcagtgcaaata 221  Q
    ||  |||||| |||||| |||||||    
T  17918643 tttaagaagagtgtcagcgcaaata 17918667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 130 - 212
Target Start/End: Complemental strand, 17891613 - 17891532
Alignment:
Q  130 atatcagagtcttgttacttattcttcaggtcttcagctccttttataggcaatgatttgatagacgttggagaagattgtca 212  Q
    ||||||||||||||||  || ||||||| ||||||| |||||| |||| |||| ||||||| ||||||||||||||| |||||    
T  17891613 atatcagagtcttgttg-ttgttcttcaagtcttcaactccttatataagcaaggatttgagagacgttggagaagagtgtca 17891532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 127 - 212
Target Start/End: Complemental strand, 1777332 - 1777248
Alignment:
Q  127 aaaatatcagagtcttgttacttattcttcaggtcttcagctccttttataggcaatgatttgatagacgttggagaagattgtca 212  Q
    |||||| ||||||||||||  || |||||||| ||||||||||||| |||||| |  ||||||| ||||||||||||||| |||||    
T  1777332 aaaatagcagagtcttgttgatt-ttcttcagatcttcagctccttatataggtagggatttgagagacgttggagaagagtgtca 1777248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 17 - 213
Target Start/End: Complemental strand, 19842834 - 19842635
Alignment:
Q  17 tgtaaactgaacaaataaacggactcacttcttaggatttctaagatataaactt-gtaaataaatcccaactatttttctctatttgatttgatagaat 115  Q
    ||||||||||||| || ||| || ||| | ||||  |||||||||||||||| || | |||| ||| | || | |||| | || |||||||||| ||| |    
T  19842834 tgtaaactgaacatatgaacagaatcattccttataatttctaagatataaaatttgaaaatcaatgctaattgttttacgctgtttgatttgacagagt 19842735  T
Q  116 tttggcacagaaaaatatcagagtcttgttacttattctt---caggtcttcagctccttttataggcaatgatttgatagacgttggagaagattgtca 212  Q
    |||| ||||||||||||   |||| ||||| ||| |||||   ||  |||||| ||||||||||| |||||||||||| ||  ||||||||||| |||||    
T  19842734 tttgccacagaaaaatagatgagtattgtt-ctttttctttctcatatcttcaactccttttatatgcaatgatttgagagctgttggagaagagtgtca 19842636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 199
Target Start/End: Original strand, 5265099 - 5265170
Alignment:
Q  127 aaaatatcagagtcttgttacttattcttcaggtcttcagctccttttataggcaatgatttgatagacgttg 199  Q
    |||||| ||||||||||||| | |||| ||| ||||| |||||||| ||||||||| ||||||| ||||||||    
T  5265099 aaaatagcagagtcttgtta-taattcgtcaagtctttagctccttatataggcaaggatttgagagacgttg 5265170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 206
Target Start/End: Original strand, 19142099 - 19142178
Alignment:
Q  126 aaaaatatcagagtcttgttacttattcttcaggtcttcagctccttttataggcaatgatttgatagacgttggagaaga 206  Q
    ||||||| ||||||||||||| |||||||||| ||||||| ||| || ||| | ||| ||| ||| |||||||||||||||    
T  19142099 aaaaatagcagagtcttgtta-ttattcttcaagtcttcaactcattatattgacaaggatatgagagacgttggagaaga 19142178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 206
Target Start/End: Original strand, 20741498 - 20741577
Alignment:
Q  126 aaaaatatcagagtcttgttacttattcttcaggtcttcagctccttttataggcaatgatttgatagacgttggagaaga 206  Q
    ||||||| ||||||||||||| |||||||||| ||||||| ||| || ||| | ||| ||| ||| |||||||||||||||    
T  20741498 aaaaatagcagagtcttgtta-ttattcttcaagtcttcaactcattatattgacaaggatatgagagacgttggagaaga 20741577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 154 - 225
Target Start/End: Complemental strand, 19143002 - 19142931
Alignment:
Q  154 ttcaggtcttcagctccttttataggcaatgatttgatagacgttggagaagattgtcagtgcaaatagagt 225  Q
    |||||||||| |||||||| |||||||| | |||||| ||||||||||||| | ||  || |||||||||||    
T  19143002 ttcaggtctttagctccttatataggcagtcatttgagagacgttggagaaaagtgcaagcgcaaatagagt 19142931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 154 - 225
Target Start/End: Complemental strand, 20742401 - 20742330
Alignment:
Q  154 ttcaggtcttcagctccttttataggcaatgatttgatagacgttggagaagattgtcagtgcaaatagagt 225  Q
    |||||||||| |||||||| |||||||| | |||||| ||||||||||||| | ||  || |||||||||||    
T  20742401 ttcaggtctttagctccttatataggcagtcatttgagagacgttggagaaaagtgcaagcgcaaatagagt 20742330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 151 - 206
Target Start/End: Complemental strand, 27707559 - 27707504
Alignment:
Q  151 ttcttcaggtcttcagctccttttataggcaatgatttgatagacgttggagaaga 206  Q
    ||||||| |||||||||||||| ||| ||||| ||||||| || ||||||||||||    
T  27707559 ttcttcaagtcttcagctccttatatgggcaaggatttgagagtcgttggagaaga 27707504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 99; Significance: 6e-49; HSPs: 11)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 15 - 221
Target Start/End: Original strand, 5828640 - 5828846
Alignment:
Q  15 agtgtaaactgaacaaataaacggactcacttcttaggatttctaagatataaacttgtaaataaatcccaactatttttctctatttgatttgatagaa 114  Q
    |||||||||| ||||||| ||| || ||||| |||||||||||||||||||||||||| |||||||||  || | |||| |  |||||||| ||| |||     
T  5828640 agtgtaaactaaacaaatgaacagattcactccttaggatttctaagatataaacttgaaaataaatcgtaagtgttttgcgttatttgatatgacagag 5828739  T
Q  115 ttttggcacagaaaaatatcagagtcttgttacttattcttcaggtcttcagctccttttataggcaatgatttgatagacgttggagaagattgtcagt 214  Q
    |||||||||| |||| || |||||||||||| ||| ||||||||||||||||||||||||||||||| |||||||| |||||| |||||| | ||||||     
T  5828740 ttttggcacaaaaaagtagcagagtcttgttgcttcttcttcaggtcttcagctccttttataggcagtgatttgagagacgtgggagaaaagtgtcagc 5828839  T
Q  215 gcaaata 221  Q
    |||||||    
T  5828840 gcaaata 5828846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 15 - 221
Target Start/End: Original strand, 5826041 - 5826247
Alignment:
Q  15 agtgtaaactgaacaaataaacggactcacttcttaggatttctaagatataaacttgtaaataaatcccaactatttttctctatttgatttgatagaa 114  Q
    |||||||||| ||||| | ||| || ||||| |||||||||||||||||||||||||| |||||||||  || | |||| |  |||||||| ||| |||     
T  5826041 agtgtaaactaaacaattgaacagattcactccttaggatttctaagatataaacttgaaaataaatcgtaagtgttttgcgttatttgatatgacagag 5826140  T
Q  115 ttttggcacagaaaaatatcagagtcttgttacttattcttcaggtcttcagctccttttataggcaatgatttgatagacgttggagaagattgtcagt 214  Q
    |||||||||| |||| || |||||||||||| ||| ||||||||||||||||||||||||||||||| |||||||| |||||| |||||| | ||||||     
T  5826141 ttttggcacaaaaaagtagcagagtcttgttgcttcttcttcaggtcttcagctccttttataggcagtgatttgagagacgtgggagaaaagtgtcagc 5826240  T
Q  215 gcaaata 221  Q
    |||||||    
T  5826241 gcaaata 5826247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 15 - 205
Target Start/End: Complemental strand, 23433290 - 23433104
Alignment:
Q  15 agtgtaaactgaacaaataaacggactcacttcttaggatttctaagatataaacttgtaaataaatcccaactatttttctctatttgatttgatagaa 114  Q
    |||||||||||||||| | ||| |||||    |||||||||||||||||||||||||| |||||||||| ||   |||| |  |||||||||||| | |     
T  23433290 agtgtaaactgaacaattgaacagactc----cttaggatttctaagatataaacttgaaaataaatcctaagggttttgcattatttgatttgacaaag 23433195  T
Q  115 ttttggcacagaaaaatatcagagtcttgttacttattcttcaggtcttcagctccttttataggcaatgatttgatagacgttggagaag 205  Q
    |  ||||| ||||||||| |||||||||||||||| |||||| ||| |||| |||  |||||||||| | | |||| ||||||||||||||    
T  23433194 taatggcatagaaaaatagcagagtcttgttacttcttcttcgggttttcaactcgctttataggcagttacttgagagacgttggagaag 23433104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 127 - 225
Target Start/End: Complemental strand, 24987706 - 24987608
Alignment:
Q  127 aaaatatcagagtcttgttacttattcttcaggtcttcagctccttttataggcaatgatttgatagacgttggagaagattgtcagtgcaaatagagt 225  Q
    |||||| |||||||||||| ||| ||||||||||||||||| ||||||||||||| |||||||| ||||||||||||||| |||||  || ||||||||    
T  24987706 aaaatagcagagtcttgttgcttcttcttcaggtcttcagccccttttataggcagtgatttgaaagacgttggagaagagtgtcaacgctaatagagt 24987608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 15 - 132
Target Start/End: Original strand, 18565768 - 18565881
Alignment:
Q  15 agtgtaaactgaacaaataaacggactcacttcttaggatttctaagatataaacttgtaaataaatcccaactatttttctctatttgatttgatagaa 114  Q
    |||||||||||||||||| ||| |||||    |||||||||||||||||||||||||| |||||||||| || | |||| |  |||||||||||| | |     
T  18565768 agtgtaaactgaacaaatgaacagactc----cttaggatttctaagatataaacttgaaaataaatcctaagtgttttgcgttatttgatttgacaaag 18565863  T
Q  115 ttttggcacagaaaaata 132  Q
     |||||||||||||||||    
T  18565864 atttggcacagaaaaata 18565881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 15 - 121
Target Start/End: Original strand, 5825640 - 5825746
Alignment:
Q  15 agtgtaaactgaacaaataaacggactcacttcttaggatttctaagatataaacttgtaaataaatcccaactatttttctctatttgatttgatagaa 114  Q
    |||||||||| ||||| | ||| || ||||| |||||||||||||||||||||||||| |||||||||  || | |||| |  |||||||||||| |||     
T  5825640 agtgtaaactaaacaattgaacagattcactccttaggatttctaagatataaacttgaaaataaatcgtaagtgttttgcgttatttgatttgacagag 5825739  T
Q  115 ttttggc 121  Q
    |||||||    
T  5825740 ttttggc 5825746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 48 - 225
Target Start/End: Original strand, 13645034 - 13645213
Alignment:
Q  48 ttaggatttctaagatataaacttg--taaataaatcccaactatttttctctatttgatttgatagaattttggcacag-aaaaatatcagagtcttgt 144  Q
    |||| ||||||||||||||||||||  || | |||||| || | ||||   ||||||||||||| ||| |  || ||||| |||||||  ||||||||||    
T  13645034 ttagcatttctaagatataaacttgaatacaaaaatcctaagtgttttgtgctatttgatttgacagagtaatgacacagtaaaaatagtagagtcttgt 13645133  T
Q  145 tacttattcttcaggtcttcagctccttttataggcaatgatttgatagacgttggagaagattgtcagtgcaaatagagt 225  Q
    || |  |||||||||||||||||||||| |||||||| | |||||| |||   ||||||||| |||||| | |||||||||    
T  13645134 taatc-ttcttcaggtcttcagctccttatataggcagtcatttgagagaatctggagaagagtgtcagagtaaatagagt 13645213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 48 - 225
Target Start/End: Original strand, 13745459 - 13745638
Alignment:
Q  48 ttaggatttctaagatataaacttg--taaataaatcccaactatttttctctatttgatttgatagaattttggcacag-aaaaatatcagagtcttgt 144  Q
    |||| ||||||||||||||||||||  || | |||||| || | ||||   ||||||||||||| ||| |  || ||||| |||||||  ||||||||||    
T  13745459 ttagcatttctaagatataaacttgaatacaaaaatcctaagtgttttgtgctatttgatttgacagagtaatgacacagtaaaaatagtagagtcttgt 13745558  T
Q  145 tacttattcttcaggtcttcagctccttttataggcaatgatttgatagacgttggagaagattgtcagtgcaaatagagt 225  Q
    || |  |||||||||||||||||||||| |||||||| | |||||| |||   ||||||||| |||||| | |||||||||    
T  13745559 taatc-ttcttcaggtcttcagctccttatataggcagtcatttgagagaatctggagaagagtgtcagagtaaatagagt 13745638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 127 - 203
Target Start/End: Original strand, 18565024 - 18565099
Alignment:
Q  127 aaaatatcagagtcttgttacttattcttcaggtcttcagctccttttataggcaatgatttgatagacgttggaga 203  Q
    ||||| ||||||||||||| ||| ||||||| | |||||||||||| ||||||||| ||||||| ||| ||||||||    
T  18565024 aaaatttcagagtcttgtt-cttcttcttcaagccttcagctccttatataggcaaggatttgagagatgttggaga 18565099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 127 - 190
Target Start/End: Complemental strand, 20266121 - 20266058
Alignment:
Q  127 aaaatatcagagtcttgttacttattcttcaggtcttcagctccttttataggcaatgatttga 190  Q
    |||||| || |||||||||||||  |||||||||||||| |||||| ||||| || ||||||||    
T  20266121 aaaatagcatagtcttgttacttcatcttcaggtcttcatctccttatatagacagtgatttga 20266058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 127 - 190
Target Start/End: Complemental strand, 21052750 - 21052687
Alignment:
Q  127 aaaatatcagagtcttgttacttattcttcaggtcttcagctccttttataggcaatgatttga 190  Q
    |||||| || |||||||||||||  |||||||||||||| |||||| ||||| || ||||||||    
T  21052750 aaaatagcatagtcttgttacttcatcttcaggtcttcatctccttatatagacagtgatttga 21052687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 97; Significance: 9e-48; HSPs: 10)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 6 - 225
Target Start/End: Complemental strand, 9756920 - 9756700
Alignment:
Q  6 taactagtgagtgtaaactgaacaaataaacggactcacttcttaggatttctaagatataaacttgtaaataaatcccaactatttttctctatttgat 105  Q
    |||||||| ||| |||||||||||||| ||| |||| ||| ||||||||||||||||||||| |||| |||  ||||  || | | || | |||||||||    
T  9756920 taactagtaagtataaactgaacaaatgaacagacttactccttaggatttctaagatataagcttgaaaaataatcttaagtgtcttgcgctatttgat 9756821  T
Q  106 ttgatagaattttggcacagaaaaatatcagagtcttgttacttattcttcaggtcttcagctccttttatagg-caatgatttgatagacgttggagaa 204  Q
    |||| ||| |||||||||| ||||||| |||||||||||||||| |||||||||||||||||||||| |||||| |  |||||||| |||||||||||||    
T  9756820 ttgacagagttttggcacataaaaataacagagtcttgttacttcttcttcaggtcttcagctccttatataggccgttgatttgagagacgttggagaa 9756721  T
Q  205 gattgtcagtgcaaatagagt 225  Q
    || || ||| |||||||||||    
T  9756720 gagtgccagcgcaaatagagt 9756700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 54 - 219
Target Start/End: Original strand, 22638085 - 22638251
Alignment:
Q  54 tttctaagatataaacttg--taaataaatcccaactatttttctctatttgatttgatagaattttggcacagaaaaatatcagagtcttgttacttat 151  Q
    |||||||||||| ||||||  || | |||||| || | |||| | ||||| ||||||||||| |  | | |||| |||||| ||||||||||||| |  |    
T  22638085 tttctaagatatgaacttgaatacaaaaatcctaagtgttttccgctattagatttgatagagtaatagaacagtaaaatagcagagtcttgttaatc-t 22638183  T
Q  152 tcttcaggtcttcagctccttttataggcaatgatttgatagacgttggagaagattgtcagtgcaaa 219  Q
    ||||||||| ||||||||||| |||||||||  |||||| ||| ||||||||||||||||||| ||||    
T  22638184 tcttcaggttttcagctccttatataggcaagaatttgagagaagttggagaagattgtcagtacaaa 22638251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 121 - 225
Target Start/End: Complemental strand, 24006510 - 24006406
Alignment:
Q  121 cacagaaaaatatcagagtcttgttacttattcttcaggtcttcagctccttttataggcaatgatttgatagacgttggagaagattgtcagtgcaaat 220  Q
    ||||| |||||| |||||  |||||| || ||||||||||||||| |||| | |||||| |  ||||||| ||||||||||||||| ||||||||||| |    
T  24006510 cacagtaaaatagcagagagttgttagttcttcttcaggtcttcaactccgtatataggtagggatttgagagacgttggagaagagtgtcagtgcaatt 24006411  T
Q  221 agagt 225  Q
    |||||    
T  24006410 agagt 24006406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 127 - 205
Target Start/End: Original strand, 26897898 - 26897975
Alignment:
Q  127 aaaatatcagagtcttgttacttattcttcaggtcttcagctccttttataggcaatgatttgatagacgttggagaag 205  Q
    |||||| ||||||||||||| |||||||||| ||||||| |||||| ||||||||| ||||||| |||||||| |||||    
T  26897898 aaaatagcagagtcttgtta-ttattcttcaagtcttcaactccttatataggcaaggatttgagagacgttgaagaag 26897975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 151 - 213
Target Start/End: Complemental strand, 17496882 - 17496820
Alignment:
Q  151 ttcttcaggtcttcagctccttttataggcaatgatttgatagacgttggagaagattgtcag 213  Q
    ||||||||||||||| |||||||||||||||  ||||||| |||| |||||||||| ||||||    
T  17496882 ttcttcaggtcttcaactccttttataggcagggatttgagagacattggagaagagtgtcag 17496820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 217
Target Start/End: Original strand, 15440575 - 15440639
Alignment:
Q  151 ttcttcaggtcttcagctccttttataggcaatgatttgatagacgttggagaagattgtcagtgca 217  Q
    ||||||| |||||||||||||| ||||||||| ||||||| |||| |||||||||  ||||||||||    
T  15440575 ttcttcaagtcttcagctccttatataggcaaagatttgagagacattggagaag--tgtcagtgca 15440639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 151 - 213
Target Start/End: Complemental strand, 17316620 - 17316558
Alignment:
Q  151 ttcttcaggtcttcagctccttttataggcaatgatttgatagacgttggagaagattgtcag 213  Q
    ||||||| ||||||| || ||| ||||||||| ||||||| ||||||||||||||| ||||||    
T  17316620 ttcttcaagtcttcaacttcttatataggcaaggatttgagagacgttggagaagagtgtcag 17316558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 206
Target Start/End: Original strand, 12397682 - 12397734
Alignment:
Q  154 ttcaggtcttcagctccttttataggcaatgatttgatagacgttggagaaga 206  Q
    |||| |||||||||||||| ||||||||| ||||||| |||||||| ||||||    
T  12397682 ttcaagtcttcagctccttatataggcaaggatttgagagacgttgaagaaga 12397734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 205
Target Start/End: Complemental strand, 31584553 - 31584499
Alignment:
Q  151 ttcttcaggtcttcagctccttttataggcaatgatttgatagacgttggagaag 205  Q
    ||||||| |||||||| ||||| |||| ||||||| |||| ||||||||||||||    
T  31584553 ttcttcaagtcttcagttccttatatatgcaatgaattgagagacgttggagaag 31584499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 213
Target Start/End: Original strand, 33438780 - 33438855
Alignment:
Q  137 agtcttgttacttattcttcaggtcttcagctccttttataggcaatgatttgatagacgttggagaagattgtcag 213  Q
    |||||||||| | ||| |||| |||||||| ||||| |||| |||| |||| || ||||||||||||||| ||||||    
T  33438780 agtcttgtta-tcatttttcaagtcttcagttccttatataagcaaagattagagagacgttggagaagagtgtcag 33438855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 96; Significance: 3e-47; HSPs: 7)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 16197850 - 16197647
Alignment:
Q  1 ctttttaactagtgagtgtaaactgaacaaataaacggactcacttcttaggatttctaagatataaacttgtaaataaatcccaactatttttctctat 100  Q
    |||| |||||||||| |||||||||||||||| ||| |||||||| ||||||||||||||||||||||| || ||||||||   ||||  ||| | ||||    
T  16197850 ctttctaactagtgaatgtaaactgaacaaatgaacagactcactccttaggatttctaagatataaacctgaaaataaattgtaactgctttgcgctat 16197751  T
Q  101 ttgatttgatagaattttggcacagaaaaatatcagagtcttgttacttattcttcaggtcttcagctccttttataggcaatgatttgatagacgttgg 200  Q
    ||||||||| ||| ||||| |||||||||||| |||||||||||| ||| ||||| ||||||||| || ||||||||| || |||||||| ||||||| |    
T  16197750 ttgatttgacagagttttgacacagaaaaatagcagagtcttgttgcttcttctttaggtcttcatcttcttttatagacagtgatttgagagacgttcg 16197651  T
Q  201 agaa 204  Q
    ||||    
T  16197650 agaa 16197647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 47 - 205
Target Start/End: Original strand, 8685429 - 8685587
Alignment:
Q  47 cttaggatttctaagatataaacttgtaaataaatcccaactatttttctctatttgatttgatagaattttggcacagaaaaatatcagagtcttgtta 146  Q
    |||||||||||||||||||||||||| |||||||||| || | |||| |  |||||||||||||||| |  ||||||| ||||||| |||||||||||||    
T  8685429 cttaggatttctaagatataaacttgaaaataaatcctaagtgttttgcattatttgatttgatagagtaatggcacaaaaaaatagcagagtcttgtta 8685528  T
Q  147 cttattcttcaggtcttcagctccttttataggcaatgatttgatagacgttggagaag 205  Q
    ||| |||||| |||||||| |||| |||||||||| | |||||| ||||||||||||||    
T  8685529 cttcttcttcgggtcttcaactccctttataggcagttatttgagagacgttggagaag 8685587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 15 - 204
Target Start/End: Complemental strand, 26653729 - 26653543
Alignment:
Q  15 agtgtaaactgaacaaataaacggactcacttcttaggatttctaagatataaacttg--taaataaatcccaactatttttctctatttgatttgatag 112  Q
    |||||||||||||||||| ||| |||||     |||||||||||||||||||||||||  || | |||||  || | |||| | ||||| ||||||| ||    
T  26653729 agtgtaaactgaacaaatgaacagactct----ttaggatttctaagatataaacttgaatacaaaaatcataagtgttttgcgctattagatttgacag 26653634  T
Q  113 aattttggcacagaaaaatatcagagtcttgttacttattcttcaggtcttcagctccttttataggcaatgatttgatagacgttggagaa 204  Q
    | |  || ||||| |||||| ||||||||||||| |  ||||| | |||||||||||||| |||||||| |||||||| |||| ||||||||    
T  26653633 agtaatgacacagtaaaatagcagagtcttgttaatc-ttctttaagtcttcagctccttatataggcagtgatttgagagacattggagaa 26653543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 151 - 206
Target Start/End: Complemental strand, 21548531 - 21548476
Alignment:
Q  151 ttcttcaggtcttcagctccttttataggcaatgatttgatagacgttggagaaga 206  Q
    |||||||||||||||||||||||||||||||  ||||||| || ||||||||||||    
T  21548531 ttcttcaggtcttcagctccttttataggcagggatttgagaggcgttggagaaga 21548476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 151 - 204
Target Start/End: Complemental strand, 26654927 - 26654874
Alignment:
Q  151 ttcttcaggtcttcagctccttttataggcaatgatttgatagacgttggagaa 204  Q
    ||||||||||||||| |||||| |||||||| |||||||| |||||||||||||    
T  26654927 ttcttcaggtcttcaactccttatataggcagtgatttgagagacgttggagaa 26654874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 90 - 221
Target Start/End: Complemental strand, 16152509 - 16152378
Alignment:
Q  90 tttttctctatttgatttgatagaattttggcacagaaaaatatcagagtcttgttacttattcttcaggtcttcagctccttttataggcaatgatttg 189  Q
    |||| ||| |||| |||||| ||| | ||| || ||||||||| |||||||||||| ||| ||||||| | || || |||||| |||||| | |||  ||    
T  16152509 ttttgctcaatttaatttgacagagtattgacatagaaaaatagcagagtcttgtttcttcttcttcatgcctgcaactccttatataggtactgaaatg 16152410  T
Q  190 atagacgttggagaagattgtcagtgcaaata 221  Q
    | |||||||||| |||| || ||| |||||||    
T  16152409 agagacgttggacaagagtgccagcgcaaata 16152378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 227
Target Start/End: Complemental strand, 17417665 - 17417596
Alignment:
Q  158 ggtcttcagctccttttataggcaatgatttgatagacgttggagaagattgtcagtgcaaatagagttg 227  Q
    ||||||||||||||| ||||| ||  ||||||| ||||||||||||||| || ||| ||| | |||||||    
T  17417665 ggtcttcagctccttatatagacatggatttgagagacgttggagaagagtgccagcgcataaagagttg 17417596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0300 (Bit Score: 82; Significance: 8e-39; HSPs: 1)
Name: scaffold0300
Description:

Target: scaffold0300; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 11829 - 12054
Alignment:
Q  1 ctttttaactagtgagtgtaaactgaacaaataaacggactcacttcttaggatttctaagatataaacttgtaaataaatcccaactatttttct-cta 99  Q
    |||| ||||||||||||||||||| ||||||  ||| |||||||| ||||||||||| || |||| |||||| |||  ||||| ||   ||||| | |||    
T  11829 ctttctaactagtgagtgtaaactaaacaaaagaacagactcactccttaggatttcaaaaatattaacttgaaaaataatcctaagagtttttgtgcta 11928  T
Q  100 tttgatttgatagaattttggcacagaaaaatatcagagtcttgttacttattcttcaggtcttcagctccttttataggcaatgatttgatagacgttg 199  Q
    |||||||||| |    |||||||||||||| || ||||||||| || ||| |||||||||| |||| ||||||||||||| | |||||||| ||||||||    
T  11929 tttgatttgacaattctttggcacagaaaactagcagagtcttattgcttcttcttcaggtattcatctccttttataggtagtgatttgagagacgttg 12028  T
Q  200 gagaagattgtcagtgcaaatagagt 225  Q
    ||||||| |||||||| |||||||||    
T  12029 gagaagagtgtcagtgtaaatagagt 12054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 71; Significance: 3e-32; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 20396679 - 20396836
Alignment:
Q  1 ctttttaactagtgagtgtaaactgaacaaataaacggactcacttcttaggatttctaagatataaacttgtaaataaatcccaactattttt-ctcta 99  Q
    |||| ||||||||||||||||||||||||||| |||  ||||||| |||||||||||||||||||||| ||| |||| ||||| || | ||||| | ||     
T  20396679 ctttctaactagtgagtgtaaactgaacaaatgaacaaactcactccttaggatttctaagatataaaattgaaaat-aatcctaagtgtttttgcgctc 20396777  T
Q  100 tttgatttgatagaattttggcacagaaaaatatcagagtcttgttacttattcttcag 158  Q
    |||||||||| |||||||||||| ||||||||| |||||| ||||| ||| ||||||||    
T  20396778 tttgatttgacagaattttggcatagaaaaatagcagagttttgttgcttcttcttcag 20396836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 212
Target Start/End: Original strand, 19731230 - 19731427
Alignment:
Q  16 gtgtaaactgaacaaataaacggactcacttcttaggatttctaagatataaacttgtaaataaatcccaactatttttctctatttgatttgatagaat 115  Q
    ||||||| ||||||||| |||  | ||||| ||||||| || |||||||||||| || ||||| |||| || | |||| |  ||||  |||||| ||| |    
T  19731230 gtgtaaattgaacaaatgaacatattcactccttaggagttttaagatataaacctgaaaatatatcctaagtgttttgcgatattacatttgacagagt 19731329  T
Q  116 tttggcacag-aaaaatatcagagtcttgttacttattcttcaggtcttcagctccttttataggcaatgatttgatagacgttggagaagattgtca 212  Q
    | |||||||  ||||||| |||||||||| |  || ||| || ||||||||||||| |||||||||| |||||||| |||||||| |||||| |||||    
T  19731330 tatggcacaataaaaatagcagagtcttgatgtttcttcctcgggtcttcagctccatttataggcagtgatttgagagacgttgtagaagagtgtca 19731427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 47 - 223
Target Start/End: Original strand, 17208785 - 17208963
Alignment:
Q  47 cttaggatttctaagatataaacttgtaa-ataaa-tcccaactatttttctctatttgatttgatagaattttggcacagaaaaatatcagagtcttgt 144  Q
    ||||||||||||||||||||||| || || ||||| ||| || | |||| | ||||||||||||| ||| |  ||  ||||||||||| || ||||||||    
T  17208785 cttaggatttctaagatataaacctgaaagataaaatcctaagtgttttgcgctatttgatttgacagagtaatgaaacagaaaaatagcaaagtcttgt 17208884  T
Q  145 tacttattcttcaggtcttcagctccttttataggcaatgatttgatagacgttggagaagattgtcagtgcaaataga 223  Q
    |     |||||||||||||||||||||| |||||||| |||  | | ||||||||||||||| ||||||  ||||||||    
T  17208885 tgtcacttcttcaggtcttcagctccttatataggcagtgaaataagagacgttggagaagagtgtcagcacaaataga 17208963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 83
Target Start/End: Original strand, 34659733 - 34659797
Alignment:
Q  15 agtgtaaactgaacaaataaacggactcacttcttaggatttctaagatataaacttgtaaataaatcc 83  Q
    |||||||||||||||||| ||| |||||    ||||||||||||||||||||||| || ||||||||||    
T  34659733 agtgtaaactgaacaaatgaacagactc----cttaggatttctaagatataaacatgaaaataaatcc 34659797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 135 - 212
Target Start/End: Complemental strand, 10815038 - 10814962
Alignment:
Q  135 agagtcttgttacttattcttcaggtcttcagctccttttataggcaatgatttgatagacgttggagaagattgtca 212  Q
    |||||| ||||| |||||||||| || ||||||||||| |||| |||| ||||||| ||| ||||||||||| |||||    
T  10815038 agagtcatgtta-ttattcttcaagtattcagctccttatatatgcaaggatttgagagatgttggagaagaatgtca 10814962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 213
Target Start/End: Original strand, 4312221 - 4312304
Alignment:
Q  129 aatatcagagtcttgttacttattcttcaggtcttcagctccttttataggcaatgatttgatagacgttggagaagattgtcag 213  Q
    ||||||| ||||||||| ||  ||||||| ||||||| ||| || ||||||||| ||||||| ||||||||||| ||| ||||||    
T  4312221 aatatcatagtcttgttgctg-ttcttcaagtcttcaactctttatataggcaaggatttgagagacgttggagtagaatgtcag 4312304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 225
Target Start/End: Complemental strand, 21689049 - 21688961
Alignment:
Q  137 agtcttgttacttattcttcaggtcttcagctccttttataggcaatgatttgatagacgttggagaagattgtcagtgcaaatagagt 225  Q
    ||||||||||||| ||||||||||||| ||| ||||||||||| | |||||| | ||| | |||||| |  || ||| |||||||||||    
T  21689049 agtcttgttactttttcttcaggtctttagcaccttttataggaagtgatttaagagatgatggagatgggtgccagcgcaaatagagt 21688961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 201
Target Start/End: Complemental strand, 18615492 - 18615418
Alignment:
Q  126 aaaaatatcagagtcttgttacttattcttcaggtcttcagctccttttataggcaatgatttgatagacgttgga 201  Q
    ||||||| ||||||||| ||| |  |||||||||||||||||||||| ||||||||  ||||||| |||| |||||    
T  18615492 aaaaatagcagagtcttattaatc-ttcttcaggtcttcagctccttatataggcagggatttgagagacattgga 18615418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 151 - 212
Target Start/End: Complemental strand, 4098004 - 4097943
Alignment:
Q  151 ttcttcaggtcttcagctccttttataggcaatgatttgatagacgttggagaagattgtca 212  Q
    ||||||| ||||| |||||||| |||||||||  ||| || ||||||||||||||| |||||    
T  4098004 ttcttcaagtcttaagctccttatataggcaagaattcgagagacgttggagaagagtgtca 4097943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 71; Significance: 3e-32; HSPs: 7)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 47 - 204
Target Start/End: Complemental strand, 22317041 - 22316884
Alignment:
Q  47 cttaggatttctaagatataaacttgtaaa-taaatcccaactatttttctctatttgatttgatagaattttggcacagaaaaatatcagagtcttgtt 145  Q
    |||||||||||||||||||||||||| ||| |||| || || ||||||   ||||||||||||| ||| | ||| |||||||||||| ||||||||| ||    
T  22317041 cttaggatttctaagatataaacttgaaaaataaaacctaagtattttgtgctatttgatttgacagagtattgacacagaaaaatagcagagtcttttt 22316942  T
Q  146 acttattcttcaggtcttcagctccttttataggcaatgatttgatagacgttggagaa 204  Q
    |||| ||||||| |||||||||||| |||||||||| |||||||| ||||||| |||||    
T  22316941 acttcttcttcatgtcttcagctcc-tttataggcagtgatttgagagacgttagagaa 22316884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 49 - 225
Target Start/End: Original strand, 8911412 - 8911585
Alignment:
Q  49 taggatttctaagatataaacttgtaaata--aatcccaactatttttctctatttgatttgatagaattttggcacagaaaaatatcagagtcttgtta 146  Q
    |||||||||||||||||||||||  | |||  ||||| || ||||||   ||||||||||||||| | |  ||| |||| ||| || ||||||||||||     
T  8911412 taggatttctaagatataaacttcaatatagaaatcctaagtattttgtgctatttgatttgataaagtaatggaacagtaaattagcagagtcttgttg 8911511  T
Q  147 cttattcttcaggtcttcagctccttttataggcaatgatttgatagacgttggagaagattgtcagtgcaaatagagt 225  Q
     |  ||||| |||||||||| ||||| ||||||||    ||| | ||||||||||||||| ||| ||||||||||||||    
T  8911512 atc-ttctttaggtcttcagatccttatataggca----tttaagagacgttggagaagagtgttagtgcaaatagagt 8911585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 154 - 204
Target Start/End: Original strand, 18445803 - 18445853
Alignment:
Q  154 ttcaggtcttcagctccttttataggcaatgatttgatagacgttggagaa 204  Q
    ||||||||||||||||||| ||||||||  ||||||| |||||||||||||    
T  18445803 ttcaggtcttcagctccttatataggcagggatttgagagacgttggagaa 18445853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 134 - 203
Target Start/End: Complemental strand, 4746497 - 4746429
Alignment:
Q  134 cagagtcttgttacttattcttcaggtcttcagctccttttataggcaatgatttgatagacgttggaga 203  Q
    ||||| |||||| ||| ||||||| ||||| |||||||| ||||||||| ||||||| ||||||||||||    
T  4746497 cagagacttgttgctt-ttcttcaagtcttaagctccttatataggcaaggatttgagagacgttggaga 4746429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 151 - 212
Target Start/End: Complemental strand, 11449629 - 11449568
Alignment:
Q  151 ttcttcaggtcttcagctccttttataggcaatgatttgatagacgttggagaagattgtca 212  Q
    ||||||| || || ||||||||  ||||||||||||||| |||||||||||||||| |||||    
T  11449629 ttcttcaagtatttagctccttagataggcaatgatttgttagacgttggagaagagtgtca 11449568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 212
Target Start/End: Complemental strand, 19555541 - 19555491
Alignment:
Q  162 ttcagctccttttataggcaatgatttgatagacgttggagaagattgtca 212  Q
    ||||| ||||| |||||||| |||||||| ||||||||||||||| |||||    
T  19555541 ttcagatccttatataggcattgatttgagagacgttggagaagagtgtca 19555491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 206
Target Start/End: Original strand, 19053054 - 19053133
Alignment:
Q  126 aaaaatatcagagtcttgttacttattcttcaggtcttcagctccttttataggcaatgatttgatagacgttggagaaga 206  Q
    ||||||| ||||||||||||  || ||||||| ||||||| |||||| ||||||||| |||| ||   |||||||||||||    
T  19053054 aaaaatagcagagtcttgttt-ttgttcttcaagtcttcaactccttatataggcaaggattagaggaacgttggagaaga 19053133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 67; Significance: 7e-30; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 10 - 206
Target Start/End: Original strand, 79079 - 79270
Alignment:
Q  10 tagtgagtgtaaactgaacaaataaacggactcacttcttaggatttctaagatataaacttgtaaataaatcccaactatttttctctatttgatttga 109  Q
    ||||||||||||||||||||||| |||  |||||||    || |||||||||||||||||||  |||||| ||| || | |||| | |||||||||||||    
T  79079 tagtgagtgtaaactgaacaaatcaacaaactcactc---agaatttctaagatataaacttaaaaataa-tcctaagtgttttgcgctatttgatttga 79174  T
Q  110 tagaattttggcacagaaaaatatcagagtcttgttacttattcttcaggtcttcagctccttttataggcaatgatttgatagacgttggagaaga 206  Q
     ||| ||||||||||||||||||  ||| ||||||| ||  ||||||||||||||| ||||||| ||||||| |||||||| ||| |||| ||||||    
T  79175 cagatttttggcacagaaaaatag-agaatcttgttgctacttcttcaggtcttcatctcctttcataggcactgatttgaaagatgttgaagaaga 79270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 63; Significance: 2e-27; HSPs: 13)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 17 - 221
Target Start/End: Original strand, 21318192 - 21318398
Alignment:
Q  17 tgtaaactgaacaaataaacggactcacttcttaggatttctaagatat-aaacttgtaaataaatcccaactatttttctctatttgatttgatagaat 115  Q
    |||||||||||||||| ||   ||||||| |||||||||| |||||||| ||||||| |||  ||||| || | |||| | ||||||||| ||| ||| |    
T  21318192 tgtaaactgaacaaatgaaaaaactcactccttaggatttttaagatataaaacttgaaaaataatcctaagtgttttgcgctatttgatatgacagagt 21318291  T
Q  116 tttggcacagaaaaatatcagagt-cttgttacttattcttcaggtcttcagctccttttataggcaatgatttgatagacgttggagaagattgtcagt 214  Q
    |||||||||||||||||   ||||  || | |||||||||||| || |||||||||||||||| ||| |||||||| |||| |||||||||| |||| |     
T  21318292 tttggcacagaaaaatagtggagtgtttatcacttattcttcaagttttcagctccttttatatgcagtgatttgagagactttggagaagagtgtcggc 21318391  T
Q  215 gcaaata 221  Q
    |||||||    
T  21318392 gcaaata 21318398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 21 - 225
Target Start/End: Complemental strand, 13178229 - 13178027
Alignment:
Q  21 aactgaacaaataaacggactcacttcttaggatttctaagatataaacttgtaaat--aaatcccaactatttttctctatttgatttgatagaatttt 118  Q
    |||||||||||| ||| |||||    |||||||||||||||||||||||||| ||    |||| | || | |||| | |||||||||||||  ||  |||    
T  13178229 aactgaacaaatgaacagactc----cttaggatttctaagatataaacttgaaagctaaaattctaagtgttttgcgctatttgatttgacggagattt 13178134  T
Q  119 ggcacagaaaaatatcagagtcttgttacttattcttcaggtcttcagctccttttataggcaatgatttgatagacgttggagaagattgtcagtgcaa 218  Q
    |||| | ||||||| || |||||||||| || | ||||||||||||| ||||||||||||||| |||||||| |||| ||||| |||| |  || |||||    
T  13178133 ggcatataaaaataacatagtcttgttatttctgcttcaggtcttcaactccttttataggcagtgatttgagagacattggaaaagagttgcaatgcaa 13178034  T
Q  219 atagagt 225  Q
    |||||||    
T  13178033 atagagt 13178027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 21 - 201
Target Start/End: Complemental strand, 13341127 - 13340949
Alignment:
Q  21 aactgaacaaataaacggactcacttcttaggatttctaagatataaacttgtaaat--aaatcccaactatttttctctatttgatttgatagaatttt 118  Q
    |||||||||||| ||| |||||    |||||||||||||||||||||||||| ||    |||| | || | |||| | |||||||||||||  ||  |||    
T  13341127 aactgaacaaatgaacagactc----cttaggatttctaagatataaacttgaaagctaaaattctaagtgttttgcgctatttgatttgacggagattt 13341032  T
Q  119 ggcacagaaaaatatcagagtcttgttacttattcttcaggtcttcagctccttttataggcaatgatttgatagacgttgga 201  Q
    |||| | ||||||| || |||||||||| || | ||||||||||||| ||||||||||| ||| |||||| | ||||||||||    
T  13341031 ggcatataaaaataacatagtcttgttatttctgcttcaggtcttcaactccttttatatgcagtgatttaagagacgttgga 13340949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 118 - 206
Target Start/End: Complemental strand, 11829786 - 11829695
Alignment:
Q  118 tggcacagaaaaatatcagagtcttgttacttattcttc---aggtcttcagctccttttataggcaatgatttgatagacgttggagaaga 206  Q
    |||||||| |||||| |||||||||||||||| ||||||   ||||||||| || ||| ||||||||||||  ||| |||||||||||||||    
T  11829786 tggcacagtaaaataacagagtcttgttacttcttcttcttcaggtcttcaactacttatataggcaatgaaatgagagacgttggagaaga 11829695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 127 - 203
Target Start/End: Complemental strand, 17034710 - 17034635
Alignment:
Q  127 aaaatatcagagtcttgttacttattcttcaggtcttcagctccttttataggcaatgatttgatagacgttggaga 203  Q
    |||||| || |||||||||| |||||||||| ||||| | |||||| ||||||||| ||||||| ||||||||||||    
T  17034710 aaaataacaaagtcttgtta-ttattcttcaagtcttaaactccttatataggcaaggatttgagagacgttggaga 17034635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 127 - 217
Target Start/End: Complemental strand, 19307195 - 19307106
Alignment:
Q  127 aaaatatcagagtcttgttacttattcttcaggtcttcagctccttttataggcaatgatttgatagacgttggagaagattgtcagtgca 217  Q
    |||||| ||||||||||||| || ||||||| || || |  ||||| ||||||||| ||||||| ||||| ||||||||| ||||||||||    
T  19307195 aaaataacagagtcttgtta-ttgttcttcaagtgttaaagtccttatataggcaaggatttgagagacgctggagaagagtgtcagtgca 19307106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 151 - 225
Target Start/End: Complemental strand, 21528318 - 21528244
Alignment:
Q  151 ttcttcaggtcttcagctccttttataggcaatgatttgatagacgttggagaagattgtcagtgcaaatagagt 225  Q
    |||||||||||| || |||||| |||||||| | |||||| ||| ||| ||||||| |||||| |||||||||||    
T  21528318 ttcttcaggtctacaactccttgtataggcagtcatttgacagaggttcgagaagagtgtcagcgcaaatagagt 21528244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 225
Target Start/End: Original strand, 9323448 - 9323552
Alignment:
Q  121 cacagaaaaatatcagagtcttgttacttattcttcaggtcttcagctccttttataggcaatgatttgatagacgttggagaagattgtcagtgcaaat 220  Q
    ||||||||||||  | |||||| |||||| |||||||||| ||| ||||||| |||||| | |||  ||| |||| |||||||||| || ||  ||||||    
T  9323448 cacagaaaaatagaaaagtcttattacttcttcttcaggtattcggctccttatataggtagtgaaatgagagacattggagaagagtgccaacgcaaat 9323547  T
Q  221 agagt 225  Q
    |||||    
T  9323548 agagt 9323552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 217
Target Start/End: Complemental strand, 16199262 - 16199203
Alignment:
Q  158 ggtcttcagctccttttataggcaatgatttgatagacgttggagaagattgtcagtgca 217  Q
    ||||||||||| ||| ||||||||  ||||| | |||||||||||||||||| |||||||    
T  16199262 ggtcttcagcttcttatataggcagggatttaagagacgttggagaagattggcagtgca 16199203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 203
Target Start/End: Original strand, 19905611 - 19905666
Alignment:
Q  148 ttattcttcaggtcttcagctccttttataggcaatgatttgatagacgttggaga 203  Q
    |||||||||||||||||| ||| || ||||||| | ||||||| ||||||||||||    
T  19905611 ttattcttcaggtcttcaactctttatataggctaggatttgagagacgttggaga 19905666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 212
Target Start/End: Complemental strand, 13291952 - 13291866
Alignment:
Q  126 aaaaatatcagagtcttgttacttattcttcaggtcttcagctccttttataggcaatgatttgatagacgttggagaagattgtca 212  Q
    |||||||  |||||||| ||  || ||||||| ||||||||||||||  | | |||| ||||||| ||||||||||||||| |||||    
T  13291952 aaaaatagaagagtcttattgtttgttcttcaagtcttcagctccttacacatgcaaggatttgagagacgttggagaagagtgtca 13291866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 201
Target Start/End: Complemental strand, 15331576 - 15331496
Alignment:
Q  120 gcacagaaaaatatcagagtcttgttacttattcttcaggtcttcagctccttttataggcaatgatttgatagacgttgga 201  Q
    |||||| |||||| ||||||||||| | |  ||||||| || ||||||||||| |||||||| |||||||| |||| |||||    
T  15331576 gcacagtaaaatagcagagtcttgtcaatc-ttcttcaagtattcagctccttatataggcagtgatttgagagacattgga 15331496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 203
Target Start/End: Complemental strand, 27406206 - 27406131
Alignment:
Q  127 aaaatatcagagtcttgttacttattcttcaggtcttcagctccttttataggcaatgatttgatagacgttggaga 203  Q
    |||||| ||||||||||||| |  ||||||| |||||||||| ||| ||||||||| ||||| | ||||||| ||||    
T  27406206 aaaatagcagagtcttgtta-tatttcttcaagtcttcagctacttatataggcaaggatttaagagacgttagaga 27406131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0711 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0711
Description:

Target: scaffold0711; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 98 - 227
Target Start/End: Complemental strand, 1911 - 1782
Alignment:
Q  98 tatttgatttgatagaattttggcacagaaaaatatcagagtcttgttacttattcttcaggtcttcagctccttttataggcaatgatttgatagacgt 197  Q
    |||||||||||||||| |  ||||| || |||||  || ||||||||||||| | ||||||||||||| |||||| |||||||| | |||||| ||||||    
T  1911 tatttgatttgatagagtaatggcatagtaaaattgcaaagtcttgttacttctgcttcaggtcttcaactccttatataggcagtcatttgagagacgt 1812  T
Q  198 tggagaagattgtcagtgcaaatagagttg 227  Q
    ||||||||| |||||||| |||||||||||    
T  1811 tggagaagagtgtcagtgtaaatagagttg 1782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 97 - 213
Target Start/End: Complemental strand, 57223 - 57101
Alignment:
Q  97 ctatttgatttgatagaattttggcacagaaaaatatcagagtcttgttacttatt------cttcaggtcttcagctccttttataggcaatgatttga 190  Q
    ||||||||||||| ||| |||||||||||||||||| || |||||||||| || ||      ||||||||||||||||||||||||||||| || |||||    
T  57223 ctatttgatttgacagagttttggcacagaaaaatagcatagtcttgttaattctttttcttcttcaggtcttcagctccttttataggcagtgctttga 57124  T
Q  191 tagacgttggagaagattgtcag 213  Q
     |||| |||||||||| ||||||    
T  57123 gagacattggagaagagtgtcag 57101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 66 - 225
Target Start/End: Original strand, 2386 - 2545
Alignment:
Q  66 aaacttgtaaataaatcccaactatttttctctatttgatttgatagaattttggcacagaaaaatatcagagtcttgttacttattcttcaggtcttca 165  Q
    ||||||| |||||||| | || | |||||| ||||||||||||| ||| |  || ||||| |||||| || |||||||||| || ||||| |||||||||    
T  2386 aaacttgaaaataaattctaagtgtttttcactatttgatttgacagagtaatgacacagtaaaatagcaaagtcttgttatttcttctttaggtcttca 2485  T
Q  166 gctccttttataggcaatgatttgatagacgttggagaagattgtcagtgcaaatagagt 225  Q
     |||||| |||| ||| |||||||| ||||||||||||||| || |||  ||||||||||    
T  2486 actccttatataagcagtgatttgagagacgttggagaagagtgccagcacaaatagagt 2545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 21 - 225
Target Start/End: Original strand, 128759 - 128961
Alignment:
Q  21 aactgaacaaataaacggactcacttcttaggatttctaagatataaacttgtaaat--aaatcccaactatttttctctatttgatttgatagaatttt 118  Q
    |||||||||||| ||| |||||    |||||||||||||||||||||||||| ||    |||| | || | |||| | |||||||||||||  ||  |||    
T  128759 aactgaacaaatgaacagactc----cttaggatttctaagatataaacttgaaagctaaaattctaagtgttttgcgctatttgatttgacggagattt 128854  T
Q  119 ggcacagaaaaatatcagagtcttgttacttattcttcaggtcttcagctccttttataggcaatgatttgatagacgttggagaagattgtcagtgcaa 218  Q
    |||| | ||||||| || |||||||||| || | ||||||||||||| ||||||||||||||| |||||||| |||| ||||| |||| |  || |||||    
T  128855 ggcatataaaaataacatagtcttgttatttctgcttcaggtcttcaactccttttataggcagtgatttgagagacattggaaaagagttgcaatgcaa 128954  T
Q  219 atagagt 225  Q
    |||||||    
T  128955 atagagt 128961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 15 - 225
Target Start/End: Original strand, 26197 - 26405
Alignment:
Q  15 agtgtaaactgaacaaataaacggactcacttcttaggatttctaagatataaacttgtaaat----aaatcccaactatttttctctatttgatttgat 110  Q
    ||||||||||||||||||||||  ||||   | |||||||||||||||||||||||||  |||    |||||| || | ||||   |||||||||||||     
T  26197 agtgtaaactgaacaaataaacaaactc---ttttaggatttctaagatataaacttg--aatgctaaaatcctaagtgttttgggctatttgatttgac 26291  T
Q  111 agaattttggcacagaaaaatatcagagtcttgttacttattcttcaggtcttcagctccttttataggcaatgatttgatagacgttggagaagattgt 210  Q
    | | |  || ||||| |||||  ||||||||||||| || |||||||||||||||||||||| |||| ||| | |||||| || |||||||||||| ||     
T  26292 atagtaatgacacagtaaaattgcagagtcttgtta-ttcttcttcaggtcttcagctccttatatatgcagtcatttgagaggcgttggagaagagtgc 26390  T
Q  211 cagtgcaaatagagt 225  Q
     |||| |||||||||    
T  26391 tagtgtaaatagagt 26405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0527 (Bit Score: 45; Significance: 9e-17; HSPs: 2)
Name: scaffold0527
Description:

Target: scaffold0527; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 129 - 225
Target Start/End: Complemental strand, 719 - 623
Alignment:
Q  129 aatatcagagtcttgttacttattcttcaggtcttcagctccttttataggcaatgatttgatagacgttggagaagattgtcagtgcaaatagagt 225  Q
    |||| |||||||||||| ||| || |||| ||||||||||||||||||||| | |||||||| || |||||||||||| | ||||  ||||||||||    
T  719 aataacagagtcttgttgcttctttttcaagtcttcagctccttttataggtagtgatttgaaagtcgttggagaagagtttcagcccaaatagagt 623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0527; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 129 - 225
Target Start/End: Complemental strand, 8782 - 8686
Alignment:
Q  129 aatatcagagtcttgttacttattcttcaggtcttcagctccttttataggcaatgatttgatagacgttggagaagattgtcagtgcaaatagagt 225  Q
    |||| |||||||||||| ||| || |||| ||||||||||||||||||||| | |||||||| || |||||||||||| | ||||  ||||||||||    
T  8782 aataacagagtcttgttgcttctttttcaagtcttcagctccttttataggtagtgatttgaaagtcgttggagaagagtttcagcccaaatagagt 8686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0298
Description:

Target: scaffold0298; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 13903 - 13845
Alignment:
Q  1 ctttttaactagtgagtgtaaactgaacaaataaacggactcacttcttaggatttcta 59  Q
    |||| ||| |||||||||||||||||||||||||||  |||||||  || |||||||||    
T  13903 ctttataaatagtgagtgtaaactgaacaaataaacatactcactcattgggatttcta 13845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 17673 - 17615
Alignment:
Q  1 ctttttaactagtgagtgtaaactgaacaaataaacggactcacttcttaggatttcta 59  Q
    |||| ||| |||||||||||||||||||||||||||  |||||||  || |||||||||    
T  17673 ctttataaatagtgagtgtaaactgaacaaataaacatactcactcattgggatttcta 17615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University