View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8407_high_7 (Length: 413)
Name: NF8407_high_7
Description: NF8407
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8407_high_7 |
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Alignment Details
Target: chr1 (Bit Score: 303; Significance: 1e-170; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 303; E-Value: 1e-170
Query Start/End: Original strand, 85 - 407
Target Start/End: Original strand, 15985697 - 15986019
Alignment:
| Q |
85 |
aggcagcaaactgaacaacgtgtttggattgtgtggtagtaaaagataagctgctaagaagccatggccggtgtctgctctttcttctctaccacttcct |
184 |
Q |
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| T |
15985697 |
aggcagcaaactgaacaacgtgtttgtattatgtggtagtaaaagataagctgctaagaagccatggccggtgtctgctctttcttctctaccacttcct |
15985796 |
T |
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| Q |
185 |
ccgacgttgttgccatttctcattctcttacaccatcactgtctctcaacaacactacattttcaacaacaagtaaaagaagatgcattctgaggaggac |
284 |
Q |
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| T |
15985797 |
ctgacgttgttgccatttcacattctcttacaccatcactgtctctcaacaacactacactttcaacaacaagtaaaagaagatgcattctgaggaggac |
15985896 |
T |
|
| Q |
285 |
gagaactgtgaggcctcttgtttgtgcagccatcaacaatccattacaataccggaaacttggtgactctgaccttaatatcagtgaaatcactcttggt |
384 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
15985897 |
gagaactgtgaggcctcttgtttgtgcagccatcaacaatccattacaataccggaaacttggtgactctgaccttaatatcagtgaaatcactcttggt |
15985996 |
T |
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| Q |
385 |
actgtaagtttacttcttctcac |
407 |
Q |
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||||||||||||||||||||||| |
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| T |
15985997 |
actgtaagtttacttcttctcac |
15986019 |
T |
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