View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8409_high_13 (Length: 255)
Name: NF8409_high_13
Description: NF8409
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8409_high_13 |
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Alignment Details
Target: chr8 (Bit Score: 226; Significance: 1e-125; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 226; E-Value: 1e-125
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 33355098 - 33354861
Alignment:
| Q |
1 |
aacttggtgggttgcctcctagaaccagctacggtaagtgaatctgaaccaaatgcatcgatatattatttgttctattgcattgcagggtggtccatag |
100 |
Q |
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| T |
33355098 |
aacttggtgggttgcctccttgaaccagctacggtaagtgaatctgaaccaaatgcatcgatatattatttgttctattgcattgcagggtggtccacag |
33354999 |
T |
|
| Q |
101 |
agagagcagctagccctgacaatattggattgggtggcctttgtttctctgctttcataatgtttagttctgtatcattcatccactgaatgaatatcat |
200 |
Q |
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||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33354998 |
agagagcagctagccctcacaatattggattgggtggcctttgtttctctgctttcataatgtttagttctgtatcattcatccactgaatgaatatcat |
33354899 |
T |
|
| Q |
201 |
aataacaatgttatgcaccataaaccaattttttcttt |
238 |
Q |
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|||||||||||||||||||||||||||||||||||||| |
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| T |
33354898 |
aataacaatgttatgcaccataaaccaattttttcttt |
33354861 |
T |
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