View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8414_low_4 (Length: 494)

Name: NF8414_low_4
Description: NF8414
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8414_low_4
NF8414_low_4
[»] chr2 (80 HSPs)
chr2 (17-494)||(38792414-38792890)
chr2 (295-486)||(39136862-39137053)
chr2 (295-486)||(39415669-39415860)
chr2 (339-493)||(39222551-39222705)
chr2 (283-411)||(39390555-39390683)
chr2 (308-468)||(39390078-39390238)
chr2 (277-410)||(38792925-38793058)
chr2 (253-394)||(38792388-38792531)
chr2 (305-452)||(39415451-39415598)
chr2 (56-133)||(38793217-38793294)
chr2 (32-140)||(39136859-39136967)
chr2 (294-398)||(39221666-39221770)
chr2 (388-468)||(39221928-39222008)
chr2 (388-468)||(39222138-39222218)
chr2 (277-411)||(38793178-38793312)
chr2 (277-417)||(39389709-39389849)
chr2 (339-443)||(39603192-39603296)
chr2 (172-243)||(39136877-39136948)
chr2 (283-434)||(39451686-39451837)
chr2 (325-411)||(39390345-39390431)
chr2 (277-395)||(39415250-39415368)
chr2 (45-126)||(39415769-39415850)
chr2 (179-243)||(39221689-39221753)
chr2 (46-126)||(39390580-39390660)
chr2 (179-243)||(39390585-39390649)
chr2 (166-246)||(39415519-39415599)
chr2 (253-417)||(39473898-39474062)
chr2 (15-134)||(38792923-38793042)
chr2 (47-126)||(39221679-39221758)
chr2 (253-411)||(39136568-39136726)
chr2 (259-349)||(39422178-39422268)
chr2 (258-407)||(39152190-39152339)
chr2 (288-417)||(39222290-39222419)
chr2 (420-493)||(39389885-39389958)
chr2 (265-358)||(39415161-39415254)
chr2 (172-264)||(39415753-39415845)
chr2 (287-398)||(39192611-39192722)
chr2 (179-242)||(39192629-39192692)
chr2 (287-398)||(39198291-39198402)
chr2 (179-242)||(39198309-39198372)
chr2 (51-126)||(39451714-39451789)
chr2 (350-417)||(39602993-39603060)
chr2 (45-143)||(39415500-39415598)
chr2 (64-125)||(39137302-39137363)
chr2 (325-434)||(39137303-39137412)
chr2 (45-98)||(39415161-39415214)
chr2 (179-239)||(39390169-39390229)
chr2 (183-243)||(39390375-39390435)
chr2 (283-391)||(39451434-39451542)
chr2 (184-243)||(39137300-39137359)
chr2 (296-411)||(39192850-39192965)
chr2 (296-411)||(39198530-39198645)
chr2 (179-238)||(39222319-39222378)
chr2 (172-263)||(39458721-39458812)
chr2 (48-134)||(39192615-39192701)
chr2 (48-134)||(39198295-39198381)
chr2 (48-126)||(39390160-39390238)
chr2 (64-126)||(39390370-39390432)
chr2 (178-231)||(38793217-38793270)
chr2 (277-386)||(39391033-39391142)
chr2 (182-243)||(39473934-39473995)
chr2 (66-143)||(39602969-39603046)
chr2 (171-263)||(38792957-38793049)
chr2 (171-235)||(39415146-39415210)
chr2 (392-455)||(39192680-39192743)
chr2 (46-109)||(39192892-39192955)
chr2 (392-455)||(39198360-39198423)
chr2 (46-109)||(39198572-39198635)
chr2 (171-230)||(39389758-39389817)
chr2 (59-109)||(39193102-39193152)
chr2 (59-109)||(39198782-39198832)
chr2 (339-488)||(39451238-39451387)
chr2 (362-483)||(39222238-39222359)
chr2 (258-323)||(39458543-39458608)
chr2 (172-220)||(39161446-39161494)
chr2 (172-220)||(39207700-39207748)
chr2 (90-134)||(39222562-39222606)
chr2 (51-131)||(39451462-39451542)
chr2 (64-124)||(39473931-39473991)
chr2 (181-265)||(39602962-39603046)
[»] chr7 (4 HSPs)
chr7 (295-434)||(19807223-19807362)
chr7 (253-411)||(19806929-19807087)
chr7 (45-124)||(19807233-19807312)
chr7 (172-243)||(19807238-19807309)
[»] chr5 (4 HSPs)
chr5 (289-411)||(17059194-17059316)
chr5 (380-486)||(33560511-33560617)
chr5 (181-231)||(33560198-33560248)
chr5 (276-386)||(33560281-33560391)


Alignment Details
Target: chr2 (Bit Score: 446; Significance: 0; HSPs: 80)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 446; E-Value: 0
Query Start/End: Original strand, 17 - 494
Target Start/End: Original strand, 38792414 - 38792890
Alignment:
Q  17 gtgttgagacaaaagcagttcgagagcggaatgaaggaccttgagttaaaagagaagcagcatgaaggtcgggtgaaggagcatgaatcaaaaacgagag 116  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38792414 gtgttgagacaaaagcagtttgagagcggaatgaaggaccttgagttaaaagagaagcagcatgaaggtcgggtgaaggagcatgaatcaaaaacgagag 38792513  T
Q  117 aatttgaaggtcaagtgatagagctggtgactgattttggtattaaatcagaacgaaggaacttgagtcaaaagagaagcaacatgaaggccaggtggag 216  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  38792514 aatttgaaggtcaagtgatagagctggtgactgattt-ggtattaaatcagaacgaaggaacttgagtcgaaagagaagcaacatgaaggccaggtggag 38792612  T
Q  217 gagcatgaatcaaaaaagagagaatttaaagatcatgtgacggagctggtgaatgattttgtattgaaacagaagctttttgaaaaccgaatgaaggacc 316  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  38792613 gagcatgaatcaaaaaagagagaatttaaagatcatgtgacggagctggtgaatgattttgtattgaaacagaagcttttcgaaaaccgaatgaaggacc 38792712  T
Q  317 ttgagtcgaaagaaaagcaatatgaaggccgggtgaaggagcacgaatcaaaagagagagaatttgaaggtcaagtgaaggagcaggaatctaaacagaa 416  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  38792713 ttgagtcgaaagaaaagcaatatgaaggccgggtgaaggagcacgaatcaaaagagagagaatttgaaggtcaagtgaaggaccaggaatctaaacagaa 38792812  T
Q  417 gttgtttgaaaggcaagttaaggagttggagtcaaaagataaccaacttgtacgcgaaatgaaggagtttgagtcaat 494  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  38792813 attgtttgaaaggcaagttaaggagttggagtcaaaagataaccaacttgtacgcaaaatgaaggagtttgagtcaat 38792890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 295 - 486
Target Start/End: Original strand, 39136862 - 39137053
Alignment:
Q  295 tttgaaaaccgaatgaaggaccttgagtcgaaagaaaagcaatatgaaggccgggtgaaggagcacgaatcaaaagagagagaatttgaaggtcaagtga 394  Q
    ||||| |||||||| ||||| |||||||| ||||| |||||  |||||||||||||||||||||| | |||||||||||||||||||||| | |||||||    
T  39136862 tttgagaaccgaatcaaggagcttgagtcaaaagagaagcagcatgaaggccgggtgaaggagcatgcatcaaaagagagagaatttgaaagccaagtga 39136961  T
Q  395 aggagcaggaatctaaacagaagttgtttgaaaggcaagttaaggagttggagtcaaaagataaccaacttgtacgcgaaatgaaggagttt 486  Q
     ||||||| ||| |||| ||||  |||||||||  ||||| |||| ||| ||||||||||| ||||||||||||  | ||||||||||||||    
T  39136962 tggagcagcaatttaaaaagaaactgtttgaaatccaagtcaaggcgttagagtcaaaagaaaaccaacttgtagaccaaatgaaggagttt 39137053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 295 - 486
Target Start/End: Complemental strand, 39415860 - 39415669
Alignment:
Q  295 tttgaaaaccgaatgaaggaccttgagtcgaaagaaaagcaatatgaaggccgggtgaaggagcacgaatcaaaagagagagaatttgaaggtcaagtga 394  Q
    |||||||||||||| ||||| ||||| || ||||| |||||  |||||||||||||||| ||||| | |||||||||||||||||||||||| || ||||    
T  39415860 tttgaaaaccgaatcaaggagcttgaatcaaaagagaagcagcatgaaggccgggtgaatgagcatgcatcaaaagagagagaatttgaaggccaggtga 39415761  T
Q  395 aggagcaggaatctaaacagaagttgtttgaaaggcaagttaaggagttggagtcaaaagataaccaacttgtacgcgaaatgaaggagttt 486  Q
    |||||| | |||||||| ||||| |||||||||  ||||| |||||||| |||||||||||  | ||||| |||  | ||||||||||||||    
T  39415760 aggagctgaaatctaaaaagaagctgtttgaaatccaagtcaaggagttagagtcaaaagaacagcaactcgtagaccaaatgaaggagttt 39415669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 339 - 493
Target Start/End: Original strand, 39222551 - 39222705
Alignment:
Q  339 tgaaggccgggtgaaggagcacgaatcaaaagagagagaatttgaaggtcaagtgaaggagcaggaatctaaacagaagttgtttgaaaggcaagttaag 438  Q
    |||||||||  |||||||||| ||||||||||||||||||||||||  |||||||||||||| | |||||||| |||||  | ||||||| |||||||||    
T  39222551 tgaaggccgaatgaaggagcatgaatcaaaagagagagaatttgaaattcaagtgaaggagctgcaatctaaaaagaagcaggttgaaagccaagttaag 39222650  T
Q  439 gagttggagtcaaaagataaccaacttgtacgcgaaatgaaggagtttgagtcaa 493  Q
    ||||| ||||||||||||||||||||| || || |||| ||||||||||| ||||    
T  39222651 gagttagagtcaaaagataaccaacttatatgcaaaataaaggagtttgaatcaa 39222705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 283 - 411
Target Start/End: Complemental strand, 39390683 - 39390555
Alignment:
Q  283 aaacagaagctttttgaaaaccgaatgaaggaccttgagtcgaaagaaaagcaatatgaaggccgggtgaaggagcacgaatcaaaagagagagaatttg 382  Q
    |||||||||| |||||||| || |||||||||  ||||||| ||||| |||||| ||||| |||| ||||||||||| ||||||||||||||||||||||    
T  39390683 aaacagaagcattttgaaagccaaatgaaggagtttgagtcaaaagagaagcaacatgaaagccgagtgaaggagcatgaatcaaaagagagagaatttg 39390584  T
Q  383 aaggtcaagtgaaggagcaggaatctaaa 411  Q
    |||| ||| ||||||| | ||||||||||    
T  39390583 aaggccaaatgaaggaactggaatctaaa 39390555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 308 - 468
Target Start/End: Complemental strand, 39390238 - 39390078
Alignment:
Q  308 tgaaggaccttgagtcgaaagaaaagcaatatgaaggccgggtgaaggagcacgaatcaaaagagagagaatttgaaggtcaagtgaaggagcaggaatc 407  Q
    |||||||  ||||||| ||||| |||||| ||||| |||| ||||||||||| ||||| ||||||||||| |||||||| ||| ||||||| | ||||||    
T  39390238 tgaaggattttgagtcaaaagagaagcaacatgaaagccgagtgaaggagcatgaatccaaagagagagattttgaaggccaaatgaaggaactggaatc 39390139  T
Q  408 taaacagaagttgtttgaaaggcaagttaaggagttggagtcaaaagataaccaacttgta 468  Q
    |||| |||||  | | ||||| |||||||||||||| ||||| |||| |||| ||||||||    
T  39390138 taaaaagaagcaggtcgaaagccaagttaaggagttagagtctaaaggtaacgaacttgta 39390078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 277 - 410
Target Start/End: Original strand, 38792925 - 38793058
Alignment:
Q  277 gtattgaaacagaagctttttgaaaaccgaatgaaggaccttgagtcgaaagaaaagcaatatgaaggccgggtgaaggagcacgaatcaaaagagagag 376  Q
    |||||||||||||||| ||| |||| || ||||||||| ||||||| |||||| || ||| |||||| |||| |||||||||| || |||||  || |||    
T  38792925 gtattgaaacagaagcatttcgaaagccaaatgaaggaacttgagttgaaagagaaccaaaatgaagaccggatgaaggagcatgactcaaagaagcgag 38793024  T
Q  377 aatttgaaggtcaagtgaaggagcaggaatctaa 410  Q
    ||||||||||||||||||||||||  ||||||||    
T  38793025 aatttgaaggtcaagtgaaggagctagaatctaa 38793058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 253 - 394
Target Start/End: Original strand, 38792388 - 38792531
Alignment:
Q  253 gtgacggagctggtgaatgattt--tgtattgaaacagaagctttttgaaaaccgaatgaaggaccttgagtcgaaagaaaagcaatatgaaggccgggt 350  Q
    |||| ||||||||||||||||||  ||| |||| ||| ||||  ||||| | | ||||||||||||||||||  ||||| |||||  ||||||| |||||    
T  38792388 gtgaaggagctggtgaatgatttggtgtgttgagacaaaagcagtttgagagcggaatgaaggaccttgagttaaaagagaagcagcatgaaggtcgggt 38792487  T
Q  351 gaaggagcacgaatcaaaagagagagaatttgaaggtcaagtga 394  Q
    ||||||||| |||||||||  |||||||||||||||||||||||    
T  38792488 gaaggagcatgaatcaaaaacgagagaatttgaaggtcaagtga 38792531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 305 - 452
Target Start/End: Complemental strand, 39415598 - 39415451
Alignment:
Q  305 gaatgaaggaccttgagtcgaaagaaaagcaatatgaaggccgggtgaaggagcacgaatcaaaagagagagaatttgaaggtcaagtgaaggagcagga 404  Q
    |||||||||| |||||| | ||||| |||||| ||||||| |  |||||||||   ||||||||||||||||||||| || | ||||||| ||||| |||    
T  39415598 gaatgaaggagcttgaggcaaaagagaagcaacatgaaggtcaagtgaaggagtgtgaatcaaaagagagagaatttaaaagccaagtgagggagctgga 39415499  T
Q  405 atctaaacagaagttgtttgaaaggcaagttaaggagttggagtcaaa 452  Q
    ||||||| |||||   |||||||| ||||| |||||||||||||||||    
T  39415498 atctaaaaagaagcaatttgaaagacaagtaaaggagttggagtcaaa 39415451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 56 - 133
Target Start/End: Original strand, 38793217 - 38793294
Alignment:
Q  56 cttgagttaaaagagaagcagcatgaaggtcgggtgaaggagcatgaatcaaaaacgagagaatttgaaggtcaagtg 133  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||| |||| | ||||||||||||||| |||||    
T  38793217 cttgagttaaaagagaagcaacatgaaggtcgggtgaaggagcatgaattaaaagctagagaatttgaaggtaaagtg 38793294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 32 - 140
Target Start/End: Original strand, 39136859 - 39136967
Alignment:
Q  32 cagttcgagagcggaatgaaggaccttgagttaaaagagaagcagcatgaaggtcgggtgaaggagcatgaatcaaaaacgagagaatttgaaggtcaag 131  Q
    ||||| |||| | |||| ||||| ||||||| ||||||||||||||||||||| |||||||||||||||| |||||||  ||||||||||||| | ||||    
T  39136859 cagtttgagaaccgaatcaaggagcttgagtcaaaagagaagcagcatgaaggccgggtgaaggagcatgcatcaaaagagagagaatttgaaagccaag 39136958  T
Q  132 tgatagagc 140  Q
    |||| ||||    
T  39136959 tgatggagc 39136967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 294 - 398
Target Start/End: Original strand, 39221666 - 39221770
Alignment:
Q  294 ttttgaaaaccgaatgaaggaccttgagtcgaaagaaaagcaatatgaaggccgggtgaaggagcacgaatcaaaagagagagaatttgaaggtcaagtg 393  Q
    |||||||| ||  ||||||||  ||||||| ||||| |||||| |||||||| ||||||||||||| | |||||||||||||||||||||||| ||| ||    
T  39221666 ttttgaaagccagatgaaggagtttgagtcaaaagagaagcaacatgaaggctgggtgaaggagcatggatcaaaagagagagaatttgaaggccaaatg 39221765  T
Q  394 aagga 398  Q
    |||||    
T  39221766 aagga 39221770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 388 - 468
Target Start/End: Original strand, 39221928 - 39222008
Alignment:
Q  388 caagtgaaggagcaggaatctaaacagaagttgtttgaaaggcaagttaaggagttggagtcaaaagataaccaacttgta 468  Q
    ||||||||||||| |||||||||| ||||| |||||||||| ||||| ||||||||  |||||||||||||||||||||||    
T  39221928 caagtgaaggagctggaatctaaaaagaagctgtttgaaagccaagtgaaggagttaaagtcaaaagataaccaacttgta 39222008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 388 - 468
Target Start/End: Original strand, 39222138 - 39222218
Alignment:
Q  388 caagtgaaggagcaggaatctaaacagaagttgtttgaaaggcaagttaaggagttggagtcaaaagataaccaacttgta 468  Q
    ||||||||||||| |||||||||| ||||| |||||||||| ||||| ||||||||  |||||||||||||||||||||||    
T  39222138 caagtgaaggagctggaatctaaaaagaagctgtttgaaagccaagtgaaggagttaaagtcaaaagataaccaacttgta 39222218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 277 - 411
Target Start/End: Original strand, 38793178 - 38793312
Alignment:
Q  277 gtattgaaacagaagctttttgaaaaccgaatgaaggaccttgagtcgaaagaaaagcaatatgaaggccgggtgaaggagcacgaatcaaaagagagag 376  Q
    ||||||||| |||||  |||||||| ||| ||||||   |||||||  ||||| |||||| ||||||| |||||||||||||| |||| |||||  ||||    
T  38793178 gtattgaaaaagaagtgttttgaaagccggatgaagatgcttgagttaaaagagaagcaacatgaaggtcgggtgaaggagcatgaattaaaagctagag 38793277  T
Q  377 aatttgaaggtcaagtgaaggagcaggaatctaaa 411  Q
    ||||||||||| ||||| |||||| ||| ||||||    
T  38793278 aatttgaaggtaaagtggaggagctggagtctaaa 38793312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 277 - 417
Target Start/End: Complemental strand, 39389849 - 39389709
Alignment:
Q  277 gtattgaaacagaagctttttgaaaaccgaatgaaggaccttgagtcgaaagaaaagcaatatgaaggccgggtgaaggagcacgaatcaaaagagagag 376  Q
    |||||||||||||||| || | ||| || ||||||||| |||||||| ||||  ||||||  ||||| ||   || ||||||| |||||||| ||||  |    
T  39389849 gtattgaaacagaagcattataaaagccaaatgaaggagcttgagtcaaaagggaagcaacttgaagaccaattgcaggagcatgaatcaaaggagaagg 39389750  T
Q  377 aatttgaaggtcaagtgaaggagcaggaatctaaacagaag 417  Q
    ||||||||||||||| |||||||| |||||||||| |||||    
T  39389749 aatttgaaggtcaagcgaaggagctggaatctaaaaagaag 39389709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 339 - 443
Target Start/End: Original strand, 39603192 - 39603296
Alignment:
Q  339 tgaaggccgggtgaaggagcacgaatcaaaagagagagaatttgaaggtcaagtgaaggagcaggaatctaaacagaagttgtttgaaaggcaagttaag 438  Q
    ||||||||| | ||||||||| ||||||||||||||||||||||||  ||||| |||||||| |||||||||| |||||   |||||||| |||||  ||    
T  39603192 tgaaggccgagcgaaggagcatgaatcaaaagagagagaatttgaaattcaagcgaaggagctggaatctaaaaagaagcattttgaaagccaagtggag 39603291  T
Q  439 gagtt 443  Q
    |||||    
T  39603292 gagtt 39603296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 172 - 243
Target Start/End: Original strand, 39136877 - 39136948
Alignment:
Q  172 aaggaacttgagtcaaaagagaagcaacatgaaggccaggtggaggagcatgaatcaaaaaagagagaattt 243  Q
    ||||| |||||||||||||||||||| |||||||||| |||| ||||||||| ||||||| |||||||||||    
T  39136877 aaggagcttgagtcaaaagagaagcagcatgaaggccgggtgaaggagcatgcatcaaaagagagagaattt 39136948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 283 - 434
Target Start/End: Original strand, 39451686 - 39451837
Alignment:
Q  283 aaacagaagctttttgaaaaccgaatgaaggaccttgagtcgaaagaaaagcaatatgaaggccgggtgaaggagcacgaatcaaaagagagagaatttg 382  Q
    |||||||| | || ||||| ||| ||| |||||||||| |  || || | |||| |||| |||||||||| |||||| |||||||||| |||||||||||    
T  39451686 aaacagaaacattatgaaagccggatggaggaccttgacttaaatgagaggcaacatgagggccgggtgatggagcatgaatcaaaagtgagagaatttg 39451785  T
Q  383 aaggtcaagtgaaggagcaggaatctaaacagaagttgtttgaaaggcaagt 434  Q
    ||||  |||||||||| | |||||||||| |||||   |||||||| |||||    
T  39451786 aaggcaaagtgaaggatctggaatctaaaaagaagcattttgaaagccaagt 39451837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 325 - 411
Target Start/End: Complemental strand, 39390431 - 39390345
Alignment:
Q  325 aaagaaaagcaatatgaaggccgggtgaaggagcacgaatcaaaagagagagaatttgaaggtcaagtgaaggagcaggaatctaaa 411  Q
    ||||| |||||| ||||| |||| ||||||||||| | |||||||||||||||||||||||| ||| ||||||| | ||||||||||    
T  39390431 aaagagaagcaacatgaaagccgagtgaaggagcatggatcaaaagagagagaatttgaaggccaaatgaaggaactggaatctaaa 39390345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 277 - 395
Target Start/End: Complemental strand, 39415368 - 39415250
Alignment:
Q  277 gtattgaaacagaagctttttgaaaaccgaatgaaggaccttgagtcgaaagaaaagcaatatgaaggccgggtgaaggagcacgaatcaaaagagagag 376  Q
    |||||||||||||||| ||| |||| || | |||| || ||||||||||||| ||||||| |||||| |||  |||||||||| ||||  || |||||||    
T  39415368 gtattgaaacagaagcatttagaaagccaagtgaaagagcttgagtcgaaagcaaagcaagatgaagtccgattgaaggagcatgaattgaacgagagag 39415269  T
Q  377 aatttgaaggtcaagtgaa 395  Q
    || || |||||||||||||    
T  39415268 aacttaaaggtcaagtgaa 39415250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 45 - 126
Target Start/End: Complemental strand, 39415850 - 39415769
Alignment:
Q  45 gaatgaaggaccttgagttaaaagagaagcagcatgaaggtcgggtgaaggagcatgaatcaaaaacgagagaatttgaagg 126  Q
    |||| ||||| ||||| | ||||||||||||||||||||| |||||||| ||||||| |||||||  |||||||||||||||    
T  39415850 gaatcaaggagcttgaatcaaaagagaagcagcatgaaggccgggtgaatgagcatgcatcaaaagagagagaatttgaagg 39415769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 179 - 243
Target Start/End: Original strand, 39221689 - 39221753
Alignment:
Q  179 ttgagtcaaaagagaagcaacatgaaggccaggtggaggagcatgaatcaaaaaagagagaattt 243  Q
    |||||||||||||||||||||||||||||  |||| ||||||||| ||||||| |||||||||||    
T  39221689 ttgagtcaaaagagaagcaacatgaaggctgggtgaaggagcatggatcaaaagagagagaattt 39221753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 46 - 126
Target Start/End: Complemental strand, 39390660 - 39390580
Alignment:
Q  46 aatgaaggaccttgagttaaaagagaagcagcatgaaggtcgggtgaaggagcatgaatcaaaaacgagagaatttgaagg 126  Q
    |||||||||  |||||| |||||||||||| |||||| | || |||||||||||||||||||||  |||||||||||||||    
T  39390660 aatgaaggagtttgagtcaaaagagaagcaacatgaaagccgagtgaaggagcatgaatcaaaagagagagaatttgaagg 39390580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 179 - 243
Target Start/End: Complemental strand, 39390649 - 39390585
Alignment:
Q  179 ttgagtcaaaagagaagcaacatgaaggccaggtggaggagcatgaatcaaaaaagagagaattt 243  Q
    |||||||||||||||||||||||||| |||  ||| ||||||||||||||||| |||||||||||    
T  39390649 ttgagtcaaaagagaagcaacatgaaagccgagtgaaggagcatgaatcaaaagagagagaattt 39390585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 166 - 246
Target Start/End: Complemental strand, 39415599 - 39415519
Alignment:
Q  166 agaacgaaggaacttgagtcaaaagagaagcaacatgaaggccaggtggaggagcatgaatcaaaaaagagagaatttaaa 246  Q
    |||| |||||| |||||| |||||||||||||||||||||| || ||| |||||  |||||||||| ||||||||||||||    
T  39415599 agaatgaaggagcttgaggcaaaagagaagcaacatgaaggtcaagtgaaggagtgtgaatcaaaagagagagaatttaaa 39415519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 253 - 417
Target Start/End: Complemental strand, 39474062 - 39473898
Alignment:
Q  253 gtgacggagctggtgaatgattttgtattgaaacagaagctttttgaaaaccgaatgaaggaccttgagtcgaaagaaaagcaatatgaaggccgggtga 352  Q
    |||| |||||| ||||||||||| ||||  |||||||||| |||||||| ||| ||| || | ||| |||| ||||| |||||   ||| ||||| |||     
T  39474062 gtgaaggagctagtgaatgatttggtatcaaaacagaagcattttgaaagccgcatggagaagcttaagtcaaaagagaagcagcttgatggccgagtgg 39473963  T
Q  353 aggagcacgaatcaaaagagagagaatttgaaggtcaagtgaaggagcaggaatctaaacagaag 417  Q
    |||||||  |||||||| |||||||||||||| | || ||||||| ||  ||||||||| |||||    
T  39473962 aggagcataaatcaaaacagagagaatttgaaagccaggtgaaggggctagaatctaaaaagaag 39473898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 15 - 134
Target Start/End: Original strand, 38792923 - 38793042
Alignment:
Q  15 tggtgttgagacaaaagcagttcgagagcggaatgaaggaccttgagttaaaagagaagcagcatgaaggtcgggtgaaggagcatgaatcaaaaacgag 114  Q
    |||| |||| ||| ||||| ||||| |||  ||||||||| |||||||| |||||||| ||  ||||||  ||| ||||||||||||| ||||| | | |    
T  38792923 tggtattgaaacagaagcatttcgaaagccaaatgaaggaacttgagttgaaagagaaccaaaatgaagaccggatgaaggagcatgactcaaagaagcg 38793022  T
Q  115 agaatttgaaggtcaagtga 134  Q
    ||||||||||||||||||||    
T  38793023 agaatttgaaggtcaagtga 38793042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 47 - 126
Target Start/End: Original strand, 39221679 - 39221758
Alignment:
Q  47 atgaaggaccttgagttaaaagagaagcagcatgaaggtcgggtgaaggagcatgaatcaaaaacgagagaatttgaagg 126  Q
    ||||||||  |||||| |||||||||||| ||||||||  ||||||||||||||| |||||||  |||||||||||||||    
T  39221679 atgaaggagtttgagtcaaaagagaagcaacatgaaggctgggtgaaggagcatggatcaaaagagagagaatttgaagg 39221758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 253 - 411
Target Start/End: Original strand, 39136568 - 39136726
Alignment:
Q  253 gtgacggagctggtgaatgattttgtattgaaacagaagctttttgaaaaccgaatgaaggaccttgagtcgaaagaaaagcaatatgaaggccgggtga 352  Q
    |||| |||||||||||||||||| ||||  |||||||||| ||| |||| ||  || ||||| |||||||||||||| | ||||  |||||||||  |||    
T  39136568 gtgaaggagctggtgaatgatttggtatcaaaacagaagcatttcgaaagccatattaaggagcttgagtcgaaagagaggcaacttgaaggccgattga 39136667  T
Q  353 aggagcacgaatcaaaagagagagaatttgaaggtcaagtgaaggagcaggaatctaaa 411  Q
    ||||||| ||||   |||| | |||||||||||| |   |||| |||| ||||||||||    
T  39136668 aggagcatgaattggaagaaaaagaatttgaaggccggatgaatgagctggaatctaaa 39136726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 259 - 349
Target Start/End: Complemental strand, 39422268 - 39422178
Alignment:
Q  259 gagctggtgaatgattttgtattgaaacagaagctttttgaaaaccgaatgaaggaccttgagtcgaaagaaaagcaatatgaaggccggg 349  Q
    ||||||| ||||||||| ||||  ||||||||||  ||||||| ||||||||||||||||||||| ||||| ||||||  ||| |||||||    
T  39422268 gagctggagaatgatttggtatcaaaacagaagcaatttgaaagccgaatgaaggaccttgagtctaaagagaagcaacttgatggccggg 39422178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 258 - 407
Target Start/End: Original strand, 39152190 - 39152339
Alignment:
Q  258 ggagctggtgaatgattttgtattgaaacagaagctttttgaaaaccgaatgaaggaccttgagtcgaaagaaaagcaatatgaaggccgggtgaaggag 357  Q
    |||||||||||||||||| ||||  |||||||||| |||||||| ||| || ||||| |||||||| ||||| || |||  ||| || || ||||||| |    
T  39152190 ggagctggtgaatgatttggtatccaaacagaagcattttgaaagccggattaaggaacttgagtctaaagagaaacaacttgatggacgagtgaagggg 39152289  T
Q  358 cacgaatcaaaagagagagaatttgaaggtcaagtgaaggagcaggaatc 407  Q
       ||||||||||||   ||||||||||| || |||||| ||| ||||||    
T  39152290 tttgaatcaaaagaggatgaatttgaaggccaggtgaagaagctggaatc 39152339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 288 - 417
Target Start/End: Original strand, 39222290 - 39222419
Alignment:
Q  288 gaagctttttgaaaaccgaatgaaggaccttgagtcgaaagaaaagcaatatgaaggccgggtgaaggagcacgaatcaaaagagagagaatttgaaggt 387  Q
    ||||| ||| |||| || |||||||||  ||||||| ||||| ||||||  ||||||||  |||||||||||  ||||||||||||||| ||| |||||     
T  39222290 gaagcatttcgaaagccaaatgaaggagtttgagtctaaagagaagcaacttgaaggccaagtgaaggagcataaatcaaaagagagaggattcgaaggc 39222389  T
Q  388 caagtgaaggagcaggaatctaaacagaag 417  Q
    ||| ||||||| | |||||| ||| |||||    
T  39222390 caactgaaggaactggaatccaaaaagaag 39222419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 420 - 493
Target Start/End: Complemental strand, 39389958 - 39389885
Alignment:
Q  420 gtttgaaaggcaagttaaggagttggagtcaaaagataaccaacttgtacgcgaaatgaaggagtttgagtcaa 493  Q
    ||||||| | ||||| |||||||| |||||||||||||||||||||||| || |||||| ||||||||| ||||    
T  39389958 gtttgaaggccaagtgaaggagttagagtcaaaagataaccaacttgtaggcaaaatgatggagtttgaatcaa 39389885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 265 - 358
Target Start/End: Complemental strand, 39415254 - 39415161
Alignment:
Q  265 gtgaatgattttgtattgaaacagaagctttttgaaaaccgaatgaaggaccttgagtcgaaagaaaagcaatatgaaggccgggtgaaggagc 358  Q
    ||||||||||| ||||  |||| ||| | |||||||| |||||||||||| |||||||| ||||| |||||| ||||||| || ||||||||||    
T  39415254 gtgaatgatttggtatcaaaactgaatcattttgaaagccgaatgaaggagcttgagtcaaaagagaagcaacatgaaggtcgagtgaaggagc 39415161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 172 - 264
Target Start/End: Complemental strand, 39415845 - 39415753
Alignment:
Q  172 aaggaacttgagtcaaaagagaagcaacatgaaggccaggtggaggagcatgaatcaaaaaagagagaatttaaagatcatgtgacggagctg 264  Q
    ||||| ||||| |||||||||||||| |||||||||| |||| | ||||||| ||||||| ||||||||||| |||  || |||| |||||||    
T  39415845 aaggagcttgaatcaaaagagaagcagcatgaaggccgggtgaatgagcatgcatcaaaagagagagaatttgaaggccaggtgaaggagctg 39415753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 287 - 398
Target Start/End: Complemental strand, 39192722 - 39192611
Alignment:
Q  287 agaagctttttgaaaaccgaatgaaggaccttgagtcgaaagaaaagcaatatgaaggccgggtgaaggagcacgaatcaaaagagagagaatttgaagg 386  Q
    ||||||| ||||||  || | |||||||  ||||||| ||||| |||||  |||||| ||  ||||||||||  |||||||||||||||||||| |||||    
T  39192722 agaagctatttgaatgccaagtgaaggagtttgagtcaaaagagaagcatcatgaagtccaagtgaaggagcgtgaatcaaaagagagagaattcgaagg 39192623  T
Q  387 tcaagtgaagga 398  Q
     |||||||||||    
T  39192622 ccaagtgaagga 39192611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 179 - 242
Target Start/End: Complemental strand, 39192692 - 39192629
Alignment:
Q  179 ttgagtcaaaagagaagcaacatgaaggccaggtggaggagcatgaatcaaaaaagagagaatt 242  Q
    ||||||||||||||||||| ||||||| ||| ||| |||||| |||||||||| ||||||||||    
T  39192692 ttgagtcaaaagagaagcatcatgaagtccaagtgaaggagcgtgaatcaaaagagagagaatt 39192629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 287 - 398
Target Start/End: Complemental strand, 39198402 - 39198291
Alignment:
Q  287 agaagctttttgaaaaccgaatgaaggaccttgagtcgaaagaaaagcaatatgaaggccgggtgaaggagcacgaatcaaaagagagagaatttgaagg 386  Q
    ||||||| ||||||  || | |||||||  ||||||| ||||| |||||  |||||| ||  ||||||||||  |||||||||||||||||||| |||||    
T  39198402 agaagctatttgaatgccaagtgaaggagtttgagtcaaaagagaagcatcatgaagtccaagtgaaggagcgtgaatcaaaagagagagaattcgaagg 39198303  T
Q  387 tcaagtgaagga 398  Q
     |||||||||||    
T  39198302 ccaagtgaagga 39198291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 179 - 242
Target Start/End: Complemental strand, 39198372 - 39198309
Alignment:
Q  179 ttgagtcaaaagagaagcaacatgaaggccaggtggaggagcatgaatcaaaaaagagagaatt 242  Q
    ||||||||||||||||||| ||||||| ||| ||| |||||| |||||||||| ||||||||||    
T  39198372 ttgagtcaaaagagaagcatcatgaagtccaagtgaaggagcgtgaatcaaaagagagagaatt 39198309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 51 - 126
Target Start/End: Original strand, 39451714 - 39451789
Alignment:
Q  51 aggaccttgagttaaaagagaagcagcatgaaggtcgggtgaaggagcatgaatcaaaaacgagagaatttgaagg 126  Q
    |||||||||| ||||| |||| ||| ||||| || ||||||| ||||||||||||||||  |||||||||||||||    
T  39451714 aggaccttgacttaaatgagaggcaacatgagggccgggtgatggagcatgaatcaaaagtgagagaatttgaagg 39451789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 350 - 417
Target Start/End: Original strand, 39602993 - 39603060
Alignment:
Q  350 tgaaggagcacgaatcaaaagagagagaatttgaaggtcaagtgaaggagcaggaatctaaacagaag 417  Q
    |||||||||| ||||||||||| ||||| |||||||| ||||||| ||||| |||||||||| |||||    
T  39602993 tgaaggagcatgaatcaaaagaaagagagtttgaaggccaagtgacggagctggaatctaaaaagaag 39603060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 45 - 143
Target Start/End: Complemental strand, 39415598 - 39415500
Alignment:
Q  45 gaatgaaggaccttgagttaaaagagaagcagcatgaaggtcgggtgaaggagcatgaatcaaaaacgagagaatttgaaggtcaagtgatagagctgg 143  Q
    |||||||||| ||||||  |||||||||||| ||||||||||  |||||||||  ||||||||||  |||||||||| || | |||||||  |||||||    
T  39415598 gaatgaaggagcttgaggcaaaagagaagcaacatgaaggtcaagtgaaggagtgtgaatcaaaagagagagaatttaaaagccaagtgagggagctgg 39415500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 64 - 125
Target Start/End: Original strand, 39137302 - 39137363
Alignment:
Q  64 aaaagagaagcagcatgaaggtcgggtgaaggagcatgaatcaaaaacgagagaatttgaag 125  Q
    ||||||||| || |||||||| ||||||| ||||||||||||||||  ||||||||||||||    
T  39137302 aaaagagaaacaacatgaaggccgggtgatggagcatgaatcaaaagtgagagaatttgaag 39137363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 325 - 434
Target Start/End: Original strand, 39137303 - 39137412
Alignment:
Q  325 aaagaaaagcaatatgaaggccgggtgaaggagcacgaatcaaaagagagagaatttgaaggtcaagtgaaggagcaggaatctaaacagaagttgtttg 424  Q
    ||||| || ||| ||||||||||||||| |||||| |||||||||| |||||||||||||| | || ||| ||| |  |||||||||  ||||  |||||    
T  39137303 aaagagaaacaacatgaaggccgggtgatggagcatgaatcaaaagtgagagaatttgaagttaaaatgatggatctagaatctaaaatgaagcagtttg 39137402  T
Q  425 aaaggcaagt 434  Q
    |||| |||||    
T  39137403 aaagccaagt 39137412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 45 - 98
Target Start/End: Complemental strand, 39415214 - 39415161
Alignment:
Q  45 gaatgaaggaccttgagttaaaagagaagcagcatgaaggtcgggtgaaggagc 98  Q
    |||||||||| ||||||| |||||||||||| ||||||||||| ||||||||||    
T  39415214 gaatgaaggagcttgagtcaaaagagaagcaacatgaaggtcgagtgaaggagc 39415161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 179 - 239
Target Start/End: Complemental strand, 39390229 - 39390169
Alignment:
Q  179 ttgagtcaaaagagaagcaacatgaaggccaggtggaggagcatgaatcaaaaaagagaga 239  Q
    |||||||||||||||||||||||||| |||  ||| ||||||||||||| ||| |||||||    
T  39390229 ttgagtcaaaagagaagcaacatgaaagccgagtgaaggagcatgaatccaaagagagaga 39390169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 183 - 243
Target Start/End: Complemental strand, 39390435 - 39390375
Alignment:
Q  183 gtcaaaagagaagcaacatgaaggccaggtggaggagcatgaatcaaaaaagagagaattt 243  Q
    |||||||||||||||||||||| |||  ||| ||||||||| ||||||| |||||||||||    
T  39390435 gtcaaaagagaagcaacatgaaagccgagtgaaggagcatggatcaaaagagagagaattt 39390375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 283 - 391
Target Start/End: Original strand, 39451434 - 39451542
Alignment:
Q  283 aaacagaagctttttgaaaaccgaatgaaggaccttgagtcgaaagaaaagcaatatgaaggccgggtgaaggagcacgaatcaaaagagagagaatttg 382  Q
    |||||||| | || ||||| ||| ||| |||||||||| || || || ||||||  |||| ||||| |||||||||| ||||||||||| ||||| ||||    
T  39451434 aaacagaaacattatgaaagccggatggaggaccttgactcaaatgagaagcaacttgaaagccggttgaaggagcatgaatcaaaagaaagagagtttg 39451533  T
Q  383 aaggtcaag 391  Q
    |||| ||||    
T  39451534 aaggccaag 39451542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 184 - 243
Target Start/End: Original strand, 39137300 - 39137359
Alignment:
Q  184 tcaaaagagaagcaacatgaaggccaggtggaggagcatgaatcaaaaaagagagaattt 243  Q
    ||||||||||| ||||||||||||| ||||  ||||||||||||||||  ||||||||||    
T  39137300 tcaaaagagaaacaacatgaaggccgggtgatggagcatgaatcaaaagtgagagaattt 39137359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 296 - 411
Target Start/End: Complemental strand, 39192965 - 39192850
Alignment:
Q  296 ttgaaaaccgaatgaaggaccttgagtcgaaagaaaagcaatatgaaggccgggtgaaggagcacgaatcaaaagagagagaatttgaaggtcaagtgaa 395  Q
    |||||| || ||||||||| |||||||| || || | |||| ||||||| ||||||||| ||   |||||||||||||  ||||| ||||| | |||| |    
T  39192965 ttgaaagccaaatgaaggagcttgagtcaaacgagatgcaacatgaaggtcgggtgaagaagtttgaatcaaaagagacggaattggaaggccgagtgca 39192866  T
Q  396 ggagcaggaatctaaa 411  Q
    ||||| ||||||||||    
T  39192865 ggagctggaatctaaa 39192850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 296 - 411
Target Start/End: Complemental strand, 39198645 - 39198530
Alignment:
Q  296 ttgaaaaccgaatgaaggaccttgagtcgaaagaaaagcaatatgaaggccgggtgaaggagcacgaatcaaaagagagagaatttgaaggtcaagtgaa 395  Q
    |||||| || ||||||||| |||||||| || || | |||| ||||||| ||||||||| ||   |||||||||||||  ||||| ||||| | |||| |    
T  39198645 ttgaaagccaaatgaaggagcttgagtcaaacgagatgcaacatgaaggtcgggtgaagaagtttgaatcaaaagagacggaattggaaggccgagtgca 39198546  T
Q  396 ggagcaggaatctaaa 411  Q
    ||||| ||||||||||    
T  39198545 ggagctggaatctaaa 39198530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 179 - 238
Target Start/End: Original strand, 39222319 - 39222378
Alignment:
Q  179 ttgagtcaaaagagaagcaacatgaaggccaggtggaggagcatgaatcaaaaaagagag 238  Q
    ||||||| ||||||||||||| ||||||||| ||| |||||||| |||||||| ||||||    
T  39222319 ttgagtctaaagagaagcaacttgaaggccaagtgaaggagcataaatcaaaagagagag 39222378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 172 - 263
Target Start/End: Original strand, 39458721 - 39458812
Alignment:
Q  172 aaggaacttgagtcaaaagagaagcaacatgaaggccaggtggaggagcatgaatcaaaaaagagagaatttaaagatcatgtgacggagct 263  Q
    |||||||||||||| ||||||||||||| ||| ||||  | ||| |  |||||||||||||||||||||||  |||  ||||||| ||||||    
T  39458721 aaggaacttgagtctaaagagaagcaacttgatggccgaggggaagtacatgaatcaaaaaagagagaattcgaaggccatgtgaaggagct 39458812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 48 - 134
Target Start/End: Complemental strand, 39192701 - 39192615
Alignment:
Q  48 tgaaggaccttgagttaaaagagaagcagcatgaaggtcgggtgaaggagcatgaatcaaaaacgagagaatttgaaggtcaagtga 134  Q
    |||||||  |||||| |||||||||||| |||||||  |  |||||||||| ||||||||||  ||||||||| ||||| |||||||    
T  39192701 tgaaggagtttgagtcaaaagagaagcatcatgaagtccaagtgaaggagcgtgaatcaaaagagagagaattcgaaggccaagtga 39192615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 48 - 134
Target Start/End: Complemental strand, 39198381 - 39198295
Alignment:
Q  48 tgaaggaccttgagttaaaagagaagcagcatgaaggtcgggtgaaggagcatgaatcaaaaacgagagaatttgaaggtcaagtga 134  Q
    |||||||  |||||| |||||||||||| |||||||  |  |||||||||| ||||||||||  ||||||||| ||||| |||||||    
T  39198381 tgaaggagtttgagtcaaaagagaagcatcatgaagtccaagtgaaggagcgtgaatcaaaagagagagaattcgaaggccaagtga 39198295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 48 - 126
Target Start/End: Complemental strand, 39390238 - 39390160
Alignment:
Q  48 tgaaggaccttgagttaaaagagaagcagcatgaaggtcgggtgaaggagcatgaatcaaaaacgagagaatttgaagg 126  Q
    |||||||  |||||| |||||||||||| |||||| | || ||||||||||||||||| |||  |||||| ||||||||    
T  39390238 tgaaggattttgagtcaaaagagaagcaacatgaaagccgagtgaaggagcatgaatccaaagagagagattttgaagg 39390160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 64 - 126
Target Start/End: Complemental strand, 39390432 - 39390370
Alignment:
Q  64 aaaagagaagcagcatgaaggtcgggtgaaggagcatgaatcaaaaacgagagaatttgaagg 126  Q
    |||||||||||| |||||| | || ||||||||||||| |||||||  |||||||||||||||    
T  39390432 aaaagagaagcaacatgaaagccgagtgaaggagcatggatcaaaagagagagaatttgaagg 39390370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 178 - 231
Target Start/End: Original strand, 38793217 - 38793270
Alignment:
Q  178 cttgagtcaaaagagaagcaacatgaaggccaggtggaggagcatgaatcaaaa 231  Q
    ||||||| ||||||||||||||||||||| | |||| |||||||||||| ||||    
T  38793217 cttgagttaaaagagaagcaacatgaaggtcgggtgaaggagcatgaattaaaa 38793270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 277 - 386
Target Start/End: Complemental strand, 39391142 - 39391033
Alignment:
Q  277 gtattgaaacagaagctttttgaaaaccgaatgaaggaccttgagtcgaaagaaaagcaatatgaaggccgggtgaaggagcacgaatcaaaagagagag 376  Q
    |||||||| ||||||| || ||||| || ||||||||| |||||||| ||||| || |||  ||||||||   |||||||||| |||| ||| ||||  |    
T  39391142 gtattgaagcagaagcattgtgaaagccaaatgaaggagcttgagtccaaagagaaacaacttgaaggccaattgaaggagcatgaattaaaggagaagg 39391043  T
Q  377 aatttgaagg 386  Q
    ||||||||||    
T  39391042 aatttgaagg 39391033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 182 - 243
Target Start/End: Complemental strand, 39473995 - 39473934
Alignment:
Q  182 agtcaaaagagaagcaacatgaaggccaggtggaggagcatgaatcaaaaaagagagaattt 243  Q
    |||||||||||||||| | ||| ||||  |||||||||||| |||||||| |||||||||||    
T  39473995 agtcaaaagagaagcagcttgatggccgagtggaggagcataaatcaaaacagagagaattt 39473934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 66 - 143
Target Start/End: Original strand, 39602969 - 39603046
Alignment:
Q  66 aagagaagcagcatgaaggtcgggtgaaggagcatgaatcaaaaacgagagaatttgaaggtcaagtgatagagctgg 143  Q
    |||||||| | |||||| ||||| ||||||||||||||||||||   ||||| |||||||| |||||||  |||||||    
T  39602969 aagagaagaaacatgaaagtcggttgaaggagcatgaatcaaaagaaagagagtttgaaggccaagtgacggagctgg 39603046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 171 - 263
Target Start/End: Original strand, 38792957 - 38793049
Alignment:
Q  171 gaaggaacttgagtcaaaagagaagcaacatgaaggccaggtggaggagcatgaatcaaaaaagagagaatttaaagatcatgtgacggagct 263  Q
    ||||||||||||||  |||||||| ||| |||||| || | || |||||||||| ||||| ||| |||||||| ||| ||| |||| ||||||    
T  38792957 gaaggaacttgagttgaaagagaaccaaaatgaagaccggatgaaggagcatgactcaaagaagcgagaatttgaaggtcaagtgaaggagct 38793049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 171 - 235
Target Start/End: Complemental strand, 39415210 - 39415146
Alignment:
Q  171 gaaggaacttgagtcaaaagagaagcaacatgaaggccaggtggaggagcatgaatcaaaaaaga 235  Q
    |||||| ||||||||||||||||||||||||||||| |  ||| ||||||  |||||| ||||||    
T  39415210 gaaggagcttgagtcaaaagagaagcaacatgaaggtcgagtgaaggagctggaatcagaaaaga 39415146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 392 - 455
Target Start/End: Complemental strand, 39192743 - 39192680
Alignment:
Q  392 tgaaggagcaggaatctaaacagaagttgtttgaaaggcaagttaaggagttggagtcaaaaga 455  Q
    ||||||||| |||||||||| ||||| | |||||| | ||||| |||||||| |||||||||||    
T  39192743 tgaaggagctggaatctaaaaagaagctatttgaatgccaagtgaaggagtttgagtcaaaaga 39192680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 46 - 109
Target Start/End: Complemental strand, 39192955 - 39192892
Alignment:
Q  46 aatgaaggaccttgagttaaaagagaagcagcatgaaggtcgggtgaaggagcatgaatcaaaa 109  Q
    ||||||||| ||||||| ||| |||| ||| |||||||||||||||||| ||  ||||||||||    
T  39192955 aatgaaggagcttgagtcaaacgagatgcaacatgaaggtcgggtgaagaagtttgaatcaaaa 39192892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 392 - 455
Target Start/End: Complemental strand, 39198423 - 39198360
Alignment:
Q  392 tgaaggagcaggaatctaaacagaagttgtttgaaaggcaagttaaggagttggagtcaaaaga 455  Q
    ||||||||| |||||||||| ||||| | |||||| | ||||| |||||||| |||||||||||    
T  39198423 tgaaggagctggaatctaaaaagaagctatttgaatgccaagtgaaggagtttgagtcaaaaga 39198360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 46 - 109
Target Start/End: Complemental strand, 39198635 - 39198572
Alignment:
Q  46 aatgaaggaccttgagttaaaagagaagcagcatgaaggtcgggtgaaggagcatgaatcaaaa 109  Q
    ||||||||| ||||||| ||| |||| ||| |||||||||||||||||| ||  ||||||||||    
T  39198635 aatgaaggagcttgagtcaaacgagatgcaacatgaaggtcgggtgaagaagtttgaatcaaaa 39198572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 171 - 230
Target Start/End: Complemental strand, 39389817 - 39389758
Alignment:
Q  171 gaaggaacttgagtcaaaagagaagcaacatgaaggccaggtggaggagcatgaatcaaa 230  Q
    |||||| ||||||||||||| |||||||| ||||| |||  || ||||||||||||||||    
T  39389817 gaaggagcttgagtcaaaagggaagcaacttgaagaccaattgcaggagcatgaatcaaa 39389758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 59 - 109
Target Start/End: Complemental strand, 39193152 - 39193102
Alignment:
Q  59 gagttaaaagagaagcagcatgaaggtcgggtgaaggagcatgaatcaaaa 109  Q
    ||||||||||||| ||| |||||||||||||||||| ||  ||||||||||    
T  39193152 gagttaaaagagatgcaacatgaaggtcgggtgaagaagtttgaatcaaaa 39193102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 59 - 109
Target Start/End: Complemental strand, 39198832 - 39198782
Alignment:
Q  59 gagttaaaagagaagcagcatgaaggtcgggtgaaggagcatgaatcaaaa 109  Q
    ||||||||||||| ||| |||||||||||||||||| ||  ||||||||||    
T  39198832 gagttaaaagagatgcaacatgaaggtcgggtgaagaagtttgaatcaaaa 39198782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 339 - 488
Target Start/End: Original strand, 39451238 - 39451387
Alignment:
Q  339 tgaaggccgggtgaaggagcacgaatcaaaagagagagaat-ttgaaggtcaagtgaaggagcaggaatctaaacagaagttgtttgaaaggcaagttaa 437  Q
    ||||||||||  |||||||   |||||||||||| |||||  ||||||| ||| | ||||||| ||||| |||| || ||   |||||||| ||| | ||    
T  39451238 tgaaggccggaagaaggagtttgaatcaaaagag-gagaaagttgaaggccaaatcaaggagctggaatttaaaaaggagcactttgaaagccaattgaa 39451336  T
Q  438 ggagttggagtcaaaagataaccaacttgtacgcgaaatgaaggagtttga 488  Q
    || |||| |||||| ||| |||||||||||| || || |||||||||||||    
T  39451337 ggtgttgcagtcaatagaaaaccaacttgtaggccaagtgaaggagtttga 39451387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 362 - 483
Target Start/End: Original strand, 39222238 - 39222359
Alignment:
Q  362 aatcaaaagagagagaatttgaaggtcaagtgaaggagcaggaatctaaacagaagttgtttgaaaggcaagttaaggagttggagtcaaaagataacca 461  Q
    ||||||||||||| ||||||||||| || | |||| ||| ||||||||||  ||||   || ||||| ||| | |||||||| ||||| ||||| || ||    
T  39222238 aatcaaaagagagggaatttgaaggccaggcgaagcagctggaatctaaaaggaagcatttcgaaagccaaatgaaggagtttgagtctaaagagaagca 39222337  T
Q  462 acttgtacgcgaaatgaaggag 483  Q
    ||||| | || || ||||||||    
T  39222338 acttgaaggccaagtgaaggag 39222359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 258 - 323
Target Start/End: Original strand, 39458543 - 39458608
Alignment:
Q  258 ggagctggtgaatgattttgtattgaaacagaagctttttgaaaaccgaatgaaggaccttgagtc 323  Q
    |||||| |||||||||||  |||  |||||||||| ||| |||| |||||||||||| ||||||||    
T  39458543 ggagctagtgaatgatttgatatcaaaacagaagcatttcgaaagccgaatgaaggagcttgagtc 39458608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 172 - 220
Target Start/End: Original strand, 39161446 - 39161494
Alignment:
Q  172 aaggaacttgagtcaaaagagaagcaacatgaaggccaggtggaggagc 220  Q
    ||||||||||||||||||||||||||  ||||||| |  ||||||||||    
T  39161446 aaggaacttgagtcaaaagagaagcagtatgaaggacgagtggaggagc 39161494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 172 - 220
Target Start/End: Complemental strand, 39207748 - 39207700
Alignment:
Q  172 aaggaacttgagtcaaaagagaagcaacatgaaggccaggtggaggagc 220  Q
    ||||||||||||||||||||||||||  ||||||| |  ||||||||||    
T  39207748 aaggaacttgagtcaaaagagaagcagtatgaaggacgagtggaggagc 39207700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 90 - 134
Target Start/End: Original strand, 39222562 - 39222606
Alignment:
Q  90 tgaaggagcatgaatcaaaaacgagagaatttgaaggtcaagtga 134  Q
    ||||||||||||||||||||  |||||||||||||  ||||||||    
T  39222562 tgaaggagcatgaatcaaaagagagagaatttgaaattcaagtga 39222606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #78
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 51 - 131
Target Start/End: Original strand, 39451462 - 39451542
Alignment:
Q  51 aggaccttgagttaaaagagaagcagcatgaaggtcgggtgaaggagcatgaatcaaaaacgagagaatttgaaggtcaag 131  Q
    |||||||||| | ||| |||||||| | |||| | ||| ||||||||||||||||||||   ||||| |||||||| ||||    
T  39451462 aggaccttgactcaaatgagaagcaacttgaaagccggttgaaggagcatgaatcaaaagaaagagagtttgaaggccaag 39451542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #79
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 64 - 124
Target Start/End: Complemental strand, 39473991 - 39473931
Alignment:
Q  64 aaaagagaagcagcatgaaggtcgggtgaaggagcatgaatcaaaaacgagagaatttgaa 124  Q
    |||||||||||||| ||| || || ||| |||||||| ||||||||  |||||||||||||    
T  39473991 aaaagagaagcagcttgatggccgagtggaggagcataaatcaaaacagagagaatttgaa 39473931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #80
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 181 - 265
Target Start/End: Original strand, 39602962 - 39603046
Alignment:
Q  181 gagtcaaaagagaagcaacatgaaggccaggtggaggagcatgaatcaaaaaagagagaatttaaagatcatgtgacggagctgg 265  Q
    |||||| |||||||| |||||||| | | | || ||||||||||||||||| | ||||| ||| |||  || |||||||||||||    
T  39602962 gagtcagaagagaagaaacatgaaagtcggttgaaggagcatgaatcaaaagaaagagagtttgaaggccaagtgacggagctgg 39603046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 72; Significance: 2e-32; HSPs: 4)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 295 - 434
Target Start/End: Original strand, 19807223 - 19807362
Alignment:
Q  295 tttgaaaaccgaatgaaggaccttgagtcgaaagaaaagcaatatgaaggccgggtgaaggagcacgaatcaaaagagagagaatttgaaggtcaagtga 394  Q
    |||||||||||||| ||||| |||||||| ||||| |||||  ||||||||||| |||||||||| | |||||||||||||||||||||| | ||| |||    
T  19807223 tttgaaaaccgaatcaaggagcttgagtcaaaagagaagcagcatgaaggccggatgaaggagcatgcatcaaaagagagagaatttgaaagccaaatga 19807322  T
Q  395 aggagcaggaatctaaacagaagttgtttgaaaggcaagt 434  Q
     ||||||| |||||||| ||||| |||||||||| |||||    
T  19807323 tggagcagcaatctaaaaagaagctgtttgaaagccaagt 19807362  T

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Target: chr7; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 253 - 411
Target Start/End: Original strand, 19806929 - 19807087
Alignment:
Q  253 gtgacggagctggtgaatgattttgtattgaaacagaagctttttgaaaaccgaatgaaggaccttgagtcgaaagaaaagcaatatgaaggccgggtga 352  Q
    |||| ||||||| |||||||||| ||||  |||||||||| ||| |||| ||  || ||||| |||||||||||||| | ||||  |||||||||  |||    
T  19806929 gtgaaggagctgatgaatgatttggtatcaaaacagaagcatttcgaaagccatattaaggagcttgagtcgaaagagaggcaacttgaaggccgattga 19807028  T
Q  353 aggagcacgaatcaaaagagagagaatttgaaggtcaagtgaaggagcaggaatctaaa 411  Q
    ||||||| |||||| ||||   |||||||||||| | |||||| |||| ||||||||||    
T  19807029 aggagcatgaatcagaagaacaagaatttgaaggccgagtgaatgagctggaatctaaa 19807087  T

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Target: chr7; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 45 - 124
Target Start/End: Original strand, 19807233 - 19807312
Alignment:
Q  45 gaatgaaggaccttgagttaaaagagaagcagcatgaaggtcgggtgaaggagcatgaatcaaaaacgagagaatttgaa 124  Q
    |||| ||||| ||||||| ||||||||||||||||||||| ||| |||||||||||| |||||||  |||||||||||||    
T  19807233 gaatcaaggagcttgagtcaaaagagaagcagcatgaaggccggatgaaggagcatgcatcaaaagagagagaatttgaa 19807312  T

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Target: chr7; HSP #4
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 172 - 243
Target Start/End: Original strand, 19807238 - 19807309
Alignment:
Q  172 aaggaacttgagtcaaaagagaagcaacatgaaggccaggtggaggagcatgaatcaaaaaagagagaattt 243  Q
    ||||| |||||||||||||||||||| |||||||||| | || ||||||||| ||||||| |||||||||||    
T  19807238 aaggagcttgagtcaaaagagaagcagcatgaaggccggatgaaggagcatgcatcaaaagagagagaattt 19807309  T

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Target: chr5 (Bit Score: 47; Significance: 1e-17; HSPs: 4)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 289 - 411
Target Start/End: Original strand, 17059194 - 17059316
Alignment:
Q  289 aagctttttgaaaaccgaatgaaggaccttgagtcgaaagaaaagcaatatgaaggccgggtgaaggagcacgaatcaaaagagagagaatttgaaggtc 388  Q
    |||| ||| |||| |||||||||||| ||||  || ||||| || ||| ||||||  | ||||| ||||||| ||||||||||||| ||||||||||| |    
T  17059194 aagcatttcgaaagccgaatgaaggagcttgcatcaaaagagaaacaacatgaagcactggtgatggagcacaaatcaaaagagagtgaatttgaaggcc 17059293  T
Q  389 aagtgaaggagcaggaatctaaa 411  Q
     ||||||||||| ||||||||||    
T  17059294 tagtgaaggagctggaatctaaa 17059316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 380 - 486
Target Start/End: Original strand, 33560511 - 33560617
Alignment:
Q  380 ttgaaggtcaagtgaaggagcaggaatctaaacagaagttgtttgaaaggcaagttaaggagttggagtcaaaagataaccaacttgtacgcgaaatgaa 479  Q
    |||| ||||| |||||||||| |||||||||| ||||    |||||||| |||||||||||||| ||||||||||| |  ||||||||| || || ||||    
T  33560511 ttgatggtcaggtgaaggagctggaatctaaaaagaaccactttgaaagacaagttaaggagtttgagtcaaaagagagtcaacttgtaggccaactgaa 33560610  T
Q  480 ggagttt 486  Q
    |||||||    
T  33560611 ggagttt 33560617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 181 - 231
Target Start/End: Original strand, 33560198 - 33560248
Alignment:
Q  181 gagtcaaaagagaagcaacatgaaggccaggtggaggagcatgaatcaaaa 231  Q
    ||||||||||||| |||||||||||||| |||| |||||  ||||||||||    
T  33560198 gagtcaaaagagatgcaacatgaaggccgggtgaaggagtttgaatcaaaa 33560248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 276 - 386
Target Start/End: Original strand, 33560281 - 33560391
Alignment:
Q  276 tgtattgaaacagaagctttttgaaaaccgaatgaaggaccttgagtcgaaagaaaagcaatatgaaggccgggtgaaggagcacgaatcaaaagagaga 375  Q
    ||||||||||||| ||| ||  |||| || ||||||||| ||| |||| ||||| ||||||  |||||||||  |||| ||||| || ||||| ||||      
T  33560281 tgtattgaaacaggagcattgagaaagccaaatgaaggagcttcagtcaaaagagaagcaacttgaaggccgattgaatgagcatgagtcaaaggagaag 33560380  T
Q  376 gaatttgaagg 386  Q
    |||||||||||    
T  33560381 gaatttgaagg 33560391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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