View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8417_low_13 (Length: 334)
Name: NF8417_low_13
Description: NF8417
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8417_low_13 |
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Alignment Details
Target: chr1 (Bit Score: 285; Significance: 1e-160; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 285; E-Value: 1e-160
Query Start/End: Original strand, 19 - 303
Target Start/End: Complemental strand, 32069317 - 32069033
Alignment:
| Q |
19 |
atgagaaaagtccacaataaataacacctactatttgttaactagttttaactaaacgaagtaacataatattttctttttgaaattagagctaatacca |
118 |
Q |
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| T |
32069317 |
atgagaaaagtccacaataaataacacctactatttgttaactagttttaactaaacgaagtaacataatattttctttttgaaattagagctaatacca |
32069218 |
T |
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| Q |
119 |
atgtctatcccaggaaccagaatttgttgagattcagcacacaattaccactataaccaataagaacggctcatcaatctgagaaactgcatcatcaaga |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32069217 |
atgtctatcccaggaaccagaatttgttgagattcagcacacaattaccactataaccaataagaacggctcatcaatctgagaaactgcatcatcaaga |
32069118 |
T |
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| Q |
219 |
agcgaaacttcctccatctgtcatttgaaaccaatcccaattcaacaaaaagtaaacaatatactggtcaaaatacataataatg |
303 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32069117 |
agcgaaacttcctccatctgtcatttgaaaccaatcccaattcaacaaaaagtaaacaatatactggtcaaaatacataataatg |
32069033 |
T |
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