View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8418_low_1 (Length: 539)

Name: NF8418_low_1
Description: NF8418
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8418_low_1
NF8418_low_1
[»] chr8 (32 HSPs)
chr8 (42-380)||(39984502-39984837)
chr8 (1-58)||(39984429-39984486)
chr8 (322-380)||(19256881-19256939)
chr8 (323-380)||(17469784-17469841)
chr8 (324-380)||(17477032-17477088)
chr8 (324-380)||(19256647-19256703)
chr8 (324-378)||(34843084-34843138)
chr8 (324-380)||(20702763-20702819)
chr8 (324-380)||(24075367-24075423)
chr8 (324-380)||(34842645-34842701)
chr8 (324-380)||(39743496-39743552)
chr8 (323-377)||(42846670-42846724)
chr8 (323-380)||(7267526-7267583)
chr8 (324-377)||(19472314-19472367)
chr8 (324-377)||(19543239-19543292)
chr8 (324-377)||(19589404-19589457)
chr8 (328-380)||(4828264-4828316)
chr8 (324-384)||(12547066-12547126)
chr8 (320-379)||(4828030-4828090)
chr8 (324-376)||(16050228-16050280)
chr8 (324-380)||(24532482-24532538)
chr8 (322-378)||(25325611-25325667)
chr8 (324-380)||(39960158-39960214)
chr8 (324-380)||(39984883-39984939)
chr8 (324-385)||(34653118-34653179)
chr8 (337-373)||(12317266-12317302)
chr8 (324-376)||(16049996-16050048)
chr8 (324-380)||(39052990-39053046)
chr8 (329-380)||(26800573-26800624)
chr8 (324-380)||(11232255-11232311)
chr8 (324-380)||(15042731-15042787)
chr8 (324-380)||(39052598-39052654)
[»] chr4 (37 HSPs)
chr4 (324-379)||(9685365-9685420)
chr4 (324-380)||(20821940-20821996)
chr4 (324-380)||(21498321-21498377)
chr4 (324-380)||(21498762-21498818)
chr4 (324-380)||(53828350-53828406)
chr4 (324-380)||(54055093-54055149)
chr4 (323-380)||(53828584-53828641)
chr4 (324-380)||(5846346-5846402)
chr4 (324-380)||(9685599-9685655)
chr4 (324-380)||(12869090-12869146)
chr4 (324-380)||(25052819-25052875)
chr4 (324-380)||(35819189-35819245)
chr4 (324-380)||(53814990-53815046)
chr4 (324-380)||(54054866-54054922)
chr4 (324-380)||(980111-980167)
chr4 (324-380)||(1518131-1518187)
chr4 (324-380)||(5846113-5846169)
chr4 (324-373)||(11103964-11104013)
chr4 (324-379)||(22231135-22231190)
chr4 (323-373)||(14783255-14783305)
chr4 (319-380)||(50543628-50543689)
chr4 (330-379)||(53814736-53814785)
chr4 (344-380)||(16066052-16066088)
chr4 (324-380)||(27634142-27634198)
chr4 (324-380)||(31254468-31254524)
chr4 (324-380)||(39902624-39902680)
chr4 (324-380)||(40717502-40717558)
chr4 (323-380)||(9279193-9279250)
chr4 (315-380)||(22863432-22863497)
chr4 (323-380)||(27634577-27634634)
chr4 (324-380)||(6218406-6218462)
chr4 (324-380)||(11036807-11036863)
chr4 (328-380)||(22827509-22827561)
chr4 (324-380)||(28245587-28245643)
chr4 (324-380)||(35788626-35788682)
chr4 (324-380)||(35788861-35788917)
chr4 (328-380)||(44118920-44118972)
[»] chr2 (31 HSPs)
chr2 (319-380)||(28407854-28407915)
chr2 (324-380)||(27036473-27036529)
chr2 (324-380)||(32884074-32884130)
chr2 (324-379)||(27897667-27897722)
chr2 (324-380)||(2324207-2324263)
chr2 (324-380)||(2324441-2324497)
chr2 (324-380)||(13486300-13486356)
chr2 (323-380)||(37770004-37770061)
chr2 (324-380)||(5509280-5509336)
chr2 (324-380)||(17854753-17854809)
chr2 (319-379)||(19191672-19191732)
chr2 (324-380)||(21591748-21591804)
chr2 (324-376)||(29718295-29718347)
chr2 (324-380)||(36316112-36316168)
chr2 (324-376)||(40718272-40718324)
chr2 (326-380)||(5509048-5509102)
chr2 (319-376)||(17854994-17855051)
chr2 (324-380)||(8424855-8424911)
chr2 (324-380)||(16533514-16533570)
chr2 (324-380)||(17719367-17719423)
chr2 (324-379)||(37812330-37812385)
chr2 (323-380)||(40379505-40379562)
chr2 (324-380)||(94081-94137)
chr2 (324-380)||(4662198-4662254)
chr2 (324-380)||(5711500-5711556)
chr2 (324-380)||(5711736-5711792)
chr2 (324-380)||(14466236-14466292)
chr2 (322-378)||(14466473-14466529)
chr2 (324-380)||(16419469-16419525)
chr2 (324-380)||(33606115-33606171)
chr2 (324-380)||(40379270-40379326)
[»] chr6 (23 HSPs)
chr6 (322-382)||(27653182-27653242)
chr6 (324-382)||(27656425-27656483)
chr6 (324-380)||(27772913-27772969)
chr6 (322-380)||(27772679-27772737)
chr6 (324-380)||(19712919-19712975)
chr6 (324-380)||(21690689-21690745)
chr6 (324-380)||(8026356-8026412)
chr6 (324-380)||(15600903-15600959)
chr6 (324-380)||(5572676-5572732)
chr6 (324-380)||(28868018-28868074)
chr6 (343-380)||(11721891-11721928)
chr6 (324-380)||(5572445-5572501)
chr6 (324-380)||(7915817-7915873)
chr6 (324-380)||(9705221-9705277)
chr6 (324-385)||(12330346-12330407)
chr6 (323-380)||(13353167-13353224)
chr6 (324-380)||(4868638-4868694)
chr6 (326-378)||(13740885-13740937)
chr6 (326-378)||(13746385-13746437)
chr6 (324-380)||(15081969-15082025)
chr6 (324-380)||(24554084-24554140)
chr6 (324-380)||(33494506-33494562)
chr6 (324-380)||(33796293-33796349)
[»] scaffold1034 (1 HSPs)
scaffold1034 (323-380)||(3202-3259)
[»] chr5 (25 HSPs)
chr5 (324-385)||(8098285-8098346)
chr5 (324-379)||(21209983-21210038)
chr5 (324-374)||(8098518-8098568)
chr5 (324-377)||(29909551-29909604)
chr5 (324-380)||(13296859-13296915)
chr5 (324-376)||(27133058-27133110)
chr5 (324-379)||(19522288-19522343)
chr5 (324-378)||(42295546-42295600)
chr5 (320-377)||(9368558-9368615)
chr5 (324-385)||(24269926-24269987)
chr5 (324-380)||(4481624-4481680)
chr5 (324-380)||(6637570-6637625)
chr5 (324-380)||(8081175-8081231)
chr5 (324-364)||(21209764-21209804)
chr5 (324-380)||(24346562-24346618)
chr5 (324-380)||(24487706-24487762)
chr5 (326-385)||(8287771-8287830)
chr5 (324-378)||(6637804-6637858)
chr5 (326-380)||(9368799-9368853)
chr5 (324-380)||(18333526-18333582)
chr5 (324-380)||(19705870-19705926)
chr5 (324-380)||(20510703-20510759)
chr5 (324-380)||(33337299-33337355)
chr5 (324-380)||(41666818-41666874)
chr5 (324-380)||(41667054-41667110)
[»] chr3 (26 HSPs)
chr3 (324-380)||(20327910-20327966)
chr3 (324-380)||(28087280-28087336)
chr3 (324-377)||(6487397-6487450)
chr3 (324-385)||(17638202-17638263)
chr3 (324-380)||(11589752-11589808)
chr3 (324-380)||(23691253-23691309)
chr3 (324-380)||(23708053-23708109)
chr3 (324-380)||(23726509-23726565)
chr3 (324-380)||(23744965-23745021)
chr3 (324-380)||(24063490-24063546)
chr3 (324-385)||(17638375-17638436)
chr3 (324-380)||(1723137-1723192)
chr3 (324-380)||(9273162-9273218)
chr3 (324-378)||(8018935-8018989)
chr3 (324-380)||(9272928-9272984)
chr3 (324-380)||(23708285-23708341)
chr3 (324-380)||(23726741-23726797)
chr3 (324-380)||(23745197-23745253)
chr3 (324-380)||(27670453-27670509)
chr3 (322-382)||(54567857-54567917)
chr3 (324-382)||(35038253-35038311)
chr3 (324-380)||(35038489-35038545)
chr3 (319-376)||(38791515-38791572)
chr3 (324-380)||(16239558-16239614)
chr3 (324-380)||(16927010-16927066)
chr3 (324-380)||(34992517-34992573)
[»] chr7 (30 HSPs)
chr7 (323-377)||(36206127-36206181)
chr7 (324-382)||(40746465-40746523)
chr7 (324-380)||(2544276-2544332)
chr7 (324-380)||(2544508-2544564)
chr7 (324-380)||(4267821-4267877)
chr7 (324-380)||(4268021-4268077)
chr7 (324-380)||(6634822-6634878)
chr7 (324-380)||(17202146-17202202)
chr7 (324-380)||(26562134-26562190)
chr7 (324-380)||(34027360-34027416)
chr7 (324-380)||(34027594-34027650)
chr7 (325-378)||(26029024-26029077)
chr7 (324-380)||(2404235-2404291)
chr7 (326-380)||(31257092-31257146)
chr7 (324-380)||(3519786-3519842)
chr7 (324-380)||(31257328-31257384)
chr7 (324-380)||(43688220-43688276)
chr7 (337-376)||(40746245-40746284)
chr7 (322-380)||(47710408-47710466)
chr7 (322-380)||(47722064-47722122)
chr7 (323-380)||(29469571-29469628)
chr7 (325-382)||(44874405-44874462)
chr7 (324-380)||(1596795-1596851)
chr7 (324-380)||(6001496-6001552)
chr7 (328-380)||(10882066-10882118)
chr7 (324-356)||(17202350-17202382)
chr7 (324-380)||(18826549-18826605)
chr7 (324-380)||(21055014-21055070)
chr7 (324-380)||(26239977-26240033)
chr7 (324-380)||(29469807-29469863)
[»] chr1 (21 HSPs)
chr1 (324-385)||(52127688-52127749)
chr1 (324-380)||(3169733-3169789)
chr1 (325-375)||(25137369-25137419)
chr1 (324-380)||(12245023-12245079)
chr1 (324-376)||(51588959-51589011)
chr1 (324-376)||(51589193-51589245)
chr1 (324-379)||(28408104-28408159)
chr1 (324-380)||(15986394-15986450)
chr1 (324-380)||(35772231-35772287)
chr1 (324-380)||(51459891-51459947)
chr1 (324-369)||(3169967-3170012)
chr1 (324-376)||(51460147-51460199)
chr1 (324-376)||(51590007-51590059)
chr1 (329-380)||(40079124-40079175)
chr1 (323-385)||(38080571-38080633)
chr1 (327-380)||(2859453-2859506)
chr1 (323-380)||(20208587-20208644)
chr1 (324-380)||(4112832-4112888)
chr1 (324-380)||(25713360-25713416)
chr1 (324-380)||(51459766-51459822)
chr1 (324-380)||(52650832-52650888)
[»] scaffold0334 (1 HSPs)
scaffold0334 (324-380)||(4490-4546)
[»] scaffold0481 (2 HSPs)
scaffold0481 (324-379)||(3533-3588)
scaffold0481 (324-377)||(3301-3354)
[»] scaffold0005 (1 HSPs)
scaffold0005 (323-373)||(56425-56475)
[»] scaffold0001 (1 HSPs)
scaffold0001 (325-380)||(429841-429896)
[»] scaffold0519 (1 HSPs)
scaffold0519 (324-380)||(2118-2174)


Alignment Details
Target: chr8 (Bit Score: 193; Significance: 1e-104; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 193; E-Value: 1e-104
Query Start/End: Original strand, 42 - 380
Target Start/End: Original strand, 39984502 - 39984837
Alignment:
Q  42 aattgaagaacgtgtttaaagtgaattaacctgttttttgttttgtccaatttggtttggacgtcaatttatattcccatagcaacttgacacatgcctt 141  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39984502 aattgaagaacgtgtttaaagtgaattaacctgttttttgttttatccaatttggtttggacgtcaatttatattcccatagcaacttgacacatgcctt 39984601  T
Q  142 gattataatcaaatgattatgttcctnnnnnnntcaaatgattatgttaagcggggccaaaaagacttactattattgtcttgnnnnnnnctggacgaaa 241  Q
    ||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||   ||||||||||       ||||||||||    
T  39984602 gattataatcaaatgattatgttcctaaaaaaatcaaatgattatgttaagcggggccaaaaagacttac---tattgtcttg-ttttttctggacgaaa 39984697  T
Q  242 gtcatctgaactttgagtgg-nnnnnnnnnnnnnnttagggtgataaggccgctttttgaaaatatatgtattcaatgtaaactgttaagagtcctacat 340  Q
    ||||||||||||||||||||               ||||||||||||| |||||||||||||||||||||||| ||||||||| ||||||||||  ||||    
T  39984698 gtcatctgaactttgagtggaaaaaaataaataaattagggtgataagtccgctttttgaaaatatatgtatttaatgtaaaccgttaagagtctcacat 39984797  T
Q  341 cggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    || ||||||||||| || ||||||||||||||||||||||    
T  39984798 cgattaggagttggtctgacaatttgtttataagtggggg 39984837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 39984429 - 39984486
Alignment:
Q  1 ctagagaaccaacttaattactggatatcattggatccaataattgaagaacgtgttt 58  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39984429 ctagagaaccaacttaattactggatatcattggatccaataattgaagaacgtgttt 39984486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 322 - 380
Target Start/End: Complemental strand, 19256939 - 19256881
Alignment:
Q  322 actgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||    
T  19256939 actgttaagagtcccacatcggttaggagttggcctgacaatttgtttataagtggggg 19256881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 323 - 380
Target Start/End: Original strand, 17469784 - 17469841
Alignment:
Q  323 ctgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||    
T  17469784 ctgttaagagtcccacatcggttaggagttggcctgacaatttgtttataagtggggg 17469841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 324 - 380
Target Start/End: Original strand, 17477032 - 17477088
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||    
T  17477032 tgttaagagtcccacatcggttaggagttggcctgacaatttgtttataagtggggg 17477088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 324 - 380
Target Start/End: Complemental strand, 19256703 - 19256647
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||    
T  19256703 tgttaagagtcccacatcggttaggagttggcctgacaatttgtttataagtggggg 19256647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 324 - 378
Target Start/End: Original strand, 34843084 - 34843138
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggg 378  Q
    |||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  34843084 tgttaagagtcccacatcggttaggagttggtctaacaatttgtttataagtggg 34843138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 324 - 380
Target Start/End: Original strand, 20702763 - 20702819
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||||||||||| ||||||||||||||||||||| ||| ||||||||||||||||||    
T  20702763 tgttaagagtcccacatcggttaggagttggcctgacagtttgtttataagtggggg 20702819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 324 - 380
Target Start/End: Complemental strand, 24075423 - 24075367
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||||||||||| ||||||||||||||||||||| ||| ||||||||||||||||||    
T  24075423 tgttaagagtcccacatcggttaggagttggcctgacactttgtttataagtggggg 24075367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 324 - 380
Target Start/End: Original strand, 34842645 - 34842701
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||||||||||| ||||| ||||||||||||||| ||||||||||||||||||||||    
T  34842645 tgttaagagtcccacatcagttaggagttggcctgacaatttgtttataagtggggg 34842701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 324 - 380
Target Start/End: Original strand, 39743496 - 39743552
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||||||||||| ||||||||||||||||||||| ||||||||||||||||| ||||    
T  39743496 tgttaagagtcccacatcggttaggagttggcctgacaatttgtttataagttgggg 39743552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 323 - 377
Target Start/End: Complemental strand, 42846724 - 42846670
Alignment:
Q  323 ctgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtgg 377  Q
    ||||||||||||  ||||||||||||||||||||| |||||||||||||||||||    
T  42846724 ctgttaagagtctcacatcggttaggagttggcctgacaatttgtttataagtgg 42846670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 323 - 380
Target Start/End: Complemental strand, 7267583 - 7267526
Alignment:
Q  323 ctgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    ||||||||||||  ||||||||||||||||||| | ||||||||||||||||||||||    
T  7267583 ctgttaagagtcacacatcggttaggagttggcttgacaatttgtttataagtggggg 7267526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 324 - 377
Target Start/End: Complemental strand, 19472367 - 19472314
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtgg 377  Q
    |||||||||||| ||||||||||||| ||||||| |||||||||||||||||||    
T  19472367 tgttaagagtcccacatcggttaggaattggcctgacaatttgtttataagtgg 19472314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 324 - 377
Target Start/End: Complemental strand, 19543292 - 19543239
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtgg 377  Q
    |||||||||||| ||||||||||||| ||||||| |||||||||||||||||||    
T  19543292 tgttaagagtcccacatcggttaggaattggcctgacaatttgtttataagtgg 19543239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 324 - 377
Target Start/End: Original strand, 19589404 - 19589457
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtgg 377  Q
    |||||||||||| ||||||||||||| ||||||| |||||||||||||||||||    
T  19589404 tgttaagagtcccacatcggttaggaattggcctgacaatttgtttataagtgg 19589457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 328 - 380
Target Start/End: Original strand, 4828264 - 4828316
Alignment:
Q  328 aagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||||||| ||||||||||||||||||| | ||||||||||||||||||||||    
T  4828264 aagagtcccacatcggttaggagttggcatgacaatttgtttataagtggggg 4828316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 324 - 384
Target Start/End: Original strand, 12547066 - 12547126
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtgggggaatc 384  Q
    |||||||||||| |||||||||||||||||| || ||||||| ||||||||||||| ||||    
T  12547066 tgttaagagtcccacatcggttaggagttggtctgacaatttatttataagtggggcaatc 12547126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 320 - 379
Target Start/End: Original strand, 4828030 - 4828090
Alignment:
Q  320 aaactgttaa-gagtcctacatcggttaggagttggcctaacaatttgtttataagtgggg 379  Q
    |||||||||| |||||| ||||||||||||||||| | | |||||||||||||||||||||    
T  4828030 aaactgttaaagagtcccacatcggttaggagttgacatgacaatttgtttataagtgggg 4828090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 324 - 376
Target Start/End: Original strand, 16050228 - 16050280
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtg 376  Q
    |||||||||||  ||||||||||||||||||||| ||||||| ||||||||||    
T  16050228 tgttaagagtctcacatcggttaggagttggcctgacaatttatttataagtg 16050280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 324 - 380
Target Start/End: Complemental strand, 24532538 - 24532482
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||||||||||| ||||||| |||||| |||||| ||||| ||||||||||||||||    
T  24532538 tgttaagagtcccacatcggataggagatggcctgacaatgtgtttataagtggggg 24532482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 322 - 378
Target Start/End: Original strand, 25325611 - 25325667
Alignment:
Q  322 actgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggg 378  Q
    |||||||||||||| ||||||| |||||  |||||||||||| ||||||||||||||    
T  25325611 actgttaagagtcccacatcggataggacatggcctaacaatgtgtttataagtggg 25325667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 324 - 380
Target Start/End: Original strand, 39960158 - 39960214
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||||||||||| ||||||| |||||| |||||| | ||||||||||||||||||||    
T  39960158 tgttaagagtcccacatcggataggagatggcctgaaaatttgtttataagtggggg 39960214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 324 - 380
Target Start/End: Original strand, 39984883 - 39984939
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||||||||||  ||||| ||||||||||| | ||||||||||||||||||||||||    
T  39984883 tgttaagagtctcacatcagttaggagttgacataacaatttgtttataagtggggg 39984939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 324 - 385
Target Start/End: Original strand, 34653118 - 34653179
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtgggggaatcc 385  Q
    |||||||||||  |||||||||||||||||  || |||||||||||||||||| || |||||    
T  34653118 tgttaagagtctcacatcggttaggagttgatctgacaatttgtttataagtgaggtaatcc 34653179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 337 - 373
Target Start/End: Original strand, 12317266 - 12317302
Alignment:
Q  337 acatcggttaggagttggcctaacaatttgtttataa 373  Q
    |||||||||| ||||||||||||||||||||||||||    
T  12317266 acatcggttaagagttggcctaacaatttgtttataa 12317302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 324 - 376
Target Start/End: Original strand, 16049996 - 16050048
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtg 376  Q
    |||||| ||||  ||||||||||||||||||||| | ||||||||||||||||    
T  16049996 tgttaaaagtctcacatcggttaggagttggcctgataatttgtttataagtg 16050048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 324 - 380
Target Start/End: Complemental strand, 39053046 - 39052990
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||||||||||| ||||||| |||| | |||||| ||||| ||||||||||||||||    
T  39053046 tgttaagagtcccacatcggataggtgatggcctgacaatgtgtttataagtggggg 39052990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 329 - 380
Target Start/End: Complemental strand, 26800624 - 26800573
Alignment:
Q  329 agagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    ||||||| ||||||||||| ||||||||| | ||||||| ||||||||||||    
T  26800624 agagtcccacatcggttagaagttggcctgataatttgtctataagtggggg 26800573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 324 - 380
Target Start/End: Complemental strand, 11232311 - 11232255
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||||||||||| |||||||  ||||  |||||| ||||| ||||||||||||||||    
T  11232311 tgttaagagtcccacatcggacaggacatggcctgacaatgtgtttataagtggggg 11232255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 324 - 380
Target Start/End: Complemental strand, 15042787 - 15042731
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||||||||||| ||||||| || ||  |||||| ||||| ||||||||||||||||    
T  15042787 tgttaagagtcccacatcggatacgacatggcctgacaatgtgtttataagtggggg 15042731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 324 - 380
Target Start/End: Complemental strand, 39052654 - 39052598
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||||||||||| ||||| | |||| | |||||| ||||| ||||||||||||||||    
T  39052654 tgttaagagtcccacatcagataggtgatggcctgacaatgtgtttataagtggggg 39052598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 56; Significance: 6e-23; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 324 - 379
Target Start/End: Original strand, 9685365 - 9685420
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtgggg 379  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9685365 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtgggg 9685420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 324 - 380
Target Start/End: Original strand, 20821940 - 20821996
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||    
T  20821940 tgttaagagtcccacatcggttaggagttggcctgacaatttgtttataagtggggg 20821996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 324 - 380
Target Start/End: Original strand, 21498321 - 21498377
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||    
T  21498321 tgttaagagtcccacatcggttaggagttggcctgacaatttgtttataagtggggg 21498377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 324 - 380
Target Start/End: Original strand, 21498762 - 21498818
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||    
T  21498762 tgttaagagtcccacatcggttaggagttggcctgacaatttgtttataagtggggg 21498818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 324 - 380
Target Start/End: Complemental strand, 53828406 - 53828350
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||    
T  53828406 tgttaagagtcccacatcggttaggagttggcctgacaatttgtttataagtggggg 53828350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 324 - 380
Target Start/End: Complemental strand, 54055149 - 54055093
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||    
T  54055149 tgttaagagtcccacatcggttagaagttggcctaacaatttgtttataagtggggg 54055093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 323 - 380
Target Start/End: Complemental strand, 53828641 - 53828584
Alignment:
Q  323 ctgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    ||||||||||| | ||||||||||||||||||||| ||||||||||||||||||||||    
T  53828641 ctgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtggggg 53828584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 324 - 380
Target Start/End: Original strand, 5846346 - 5846402
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||||||||||| ||||||||||||||||||| | ||||||||||||||||||||||    
T  5846346 tgttaagagtcccacatcggttaggagttggcatgacaatttgtttataagtggggg 5846402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 324 - 380
Target Start/End: Original strand, 9685599 - 9685655
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    ||||||||||||  ||||||||||||||||| |||||||||||||||||||||||||    
T  9685599 tgttaagagtcccgcatcggttaggagttggtctaacaatttgtttataagtggggg 9685655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 324 - 380
Target Start/End: Complemental strand, 12869146 - 12869090
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||||||||||||||||| ||||| ||||||||| ||||||||||||||||||||||    
T  12869146 tgttaagagtcctacatcagttagcagttggcctgacaatttgtttataagtggggg 12869090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 324 - 380
Target Start/End: Original strand, 25052819 - 25052875
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||||||||||| ||||||||||||| ||||||| ||||||||||||||||||||||    
T  25052819 tgttaagagtcccacatcggttaggaattggcctgacaatttgtttataagtggggg 25052875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 324 - 380
Target Start/End: Complemental strand, 35819245 - 35819189
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||||||||||| ||||||||||||||||||||| |||||||||||||| |||||||    
T  35819245 tgttaagagtcccacatcggttaggagttggcctgacaatttgtttatatgtggggg 35819189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 324 - 380
Target Start/End: Complemental strand, 53815046 - 53814990
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||||||||| | ||||||||||||||||||||| ||||||||||||||||||||||    
T  53815046 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtggggg 53814990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 324 - 380
Target Start/End: Complemental strand, 54054922 - 54054866
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||||||||||| |||||| |||||||||| ||||||||||||||||||||||||||    
T  54054922 tgttaagagtcccacatcgattaggagttgacctaacaatttgtttataagtggggg 54054866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 324 - 380
Target Start/End: Complemental strand, 980167 - 980111
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||||||||||| ||||||||||||||||| ||| | ||||||||||||||||||||    
T  980167 tgttaagagtcccacatcggttaggagttgacctgagaatttgtttataagtggggg 980111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 324 - 380
Target Start/End: Original strand, 1518131 - 1518187
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    ||||| |||||| ||||||||||||||||| ||| ||||||||||||||||||||||    
T  1518131 tgttatgagtcccacatcggttaggagttgacctgacaatttgtttataagtggggg 1518187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 324 - 380
Target Start/End: Original strand, 5846113 - 5846169
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||||||||||  |||||||||||||||||| || ||||||||||||||||||||||    
T  5846113 tgttaagagtctcacatcggttaggagttggtctgacaatttgtttataagtggggg 5846169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 324 - 373
Target Start/End: Complemental strand, 11104013 - 11103964
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataa 373  Q
    |||||||||||| ||||||||||||||||||||| ||||||| |||||||    
T  11104013 tgttaagagtcccacatcggttaggagttggcctgacaatttatttataa 11103964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 324 - 379
Target Start/End: Complemental strand, 22231190 - 22231135
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtgggg 379  Q
    |||||||||||||||||||| |||||  |||||| ||||| |||||||||||||||    
T  22231190 tgttaagagtcctacatcggataggatatggcctgacaatgtgtttataagtgggg 22231135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 323 - 373
Target Start/End: Complemental strand, 14783305 - 14783255
Alignment:
Q  323 ctgttaagagtcctacatcggttaggagttggcctaacaatttgtttataa 373  Q
    ||||||||||||| |||||||||||||||||  || |||||||||||||||    
T  14783305 ctgttaagagtcccacatcggttaggagttgatctgacaatttgtttataa 14783255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 319 - 380
Target Start/End: Complemental strand, 50543689 - 50543628
Alignment:
Q  319 taaactgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    ||||||||||||||||| ||||||| |||| | |||||| ||||| ||| ||||||||||||    
T  50543689 taaactgttaagagtcccacatcggataggtgatggcctgacaatgtgtgtataagtggggg 50543628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 330 - 379
Target Start/End: Complemental strand, 53814785 - 53814736
Alignment:
Q  330 gagtcctacatcggttaggagttggcctaacaatttgtttataagtgggg 379  Q
    |||||| || |||| ||||||||||||| |||||||||||||||||||||    
T  53814785 gagtccaacgtcggctaggagttggcctgacaatttgtttataagtgggg 53814736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 344 - 380
Target Start/End: Original strand, 16066052 - 16066088
Alignment:
Q  344 ttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||||||||||||| ||||||||||||||||||||||    
T  16066052 ttaggagttggcctgacaatttgtttataagtggggg 16066088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 324 - 380
Target Start/End: Complemental strand, 27634198 - 27634142
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||||||||||| ||||||| |||||  |||||| ||||| ||||||||||||||||    
T  27634198 tgttaagagtcccacatcggataggacatggcctgacaatgtgtttataagtggggg 27634142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 324 - 380
Target Start/End: Complemental strand, 31254524 - 31254468
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||||||||||| ||||||| |||| | |||||| ||||| ||||||||||||||||    
T  31254524 tgttaagagtcccacatcggataggtgatggcctgacaatgtgtttataagtggggg 31254468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 324 - 380
Target Start/End: Complemental strand, 39902680 - 39902624
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||||||||||| ||||||| |||||  |||||| ||||| ||||||||||||||||    
T  39902680 tgttaagagtcccacatcggataggacatggcctgacaatgtgtttataagtggggg 39902624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 324 - 380
Target Start/End: Complemental strand, 40717558 - 40717502
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||||||||| | ||||| ||| ||||||||||| | ||||||||||||||||||||    
T  40717558 tgttaagagttccacatcagttgggagttggcctgataatttgtttataagtggggg 40717502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 323 - 380
Target Start/End: Original strand, 9279193 - 9279250
Alignment:
Q  323 ctgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    ||||||||||||  ||||||| |||| | |||||| ||||| ||||||||||||||||    
T  9279193 ctgttaagagtcgcacatcggataggtgatggcctgacaatgtgtttataagtggggg 9279250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 315 - 380
Target Start/End: Original strand, 22863432 - 22863497
Alignment:
Q  315 aatgtaaactgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||| |||||||||||||||  |||||||  || || |||||| ||||| ||||||||||||||||    
T  22863432 aatggaaactgttaagagtctcacatcggacagaagatggcctgacaatgtgtttataagtggggg 22863497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 323 - 380
Target Start/End: Complemental strand, 27634634 - 27634577
Alignment:
Q  323 ctgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    ||||||||||||| ||||||| |||||  |||||| ||||| ||||||| ||||||||    
T  27634634 ctgttaagagtcccacatcggataggacatggcctgacaatgtgtttatgagtggggg 27634577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 324 - 380
Target Start/End: Original strand, 6218406 - 6218462
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||||||||||  ||||| | |||||| || ||||||||| ||||||||||||||||    
T  6218406 tgttaagagtctcacatcagataggagatgacctaacaatgtgtttataagtggggg 6218462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 324 - 380
Target Start/End: Complemental strand, 11036863 - 11036807
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||||||||| | ||||||| |||| | |||||| ||||| ||||||||||||||||    
T  11036863 tgttaagagtacaacatcggataggtgatggcctgacaatgtgtttataagtggggg 11036807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 328 - 380
Target Start/End: Original strand, 22827509 - 22827561
Alignment:
Q  328 aagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||||||| ||||||| |||||| |||||| ||||  ||||||||||||||||    
T  22827509 aagagtcccacatcggataggagatggcctgacaacgtgtttataagtggggg 22827561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 324 - 380
Target Start/End: Complemental strand, 28245643 - 28245587
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||||||||||  ||||||| |||| | |||||| ||||| ||||||||||||||||    
T  28245643 tgttaagagtctcacatcggataggtgatggcctgacaatgtgtttataagtggggg 28245587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 324 - 380
Target Start/End: Original strand, 35788626 - 35788682
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||||||||||| ||||| | |||||  |||||| ||||| ||||||||||||||||    
T  35788626 tgttaagagtcccacatcagataggacatggcctgacaatgtgtttataagtggggg 35788682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 324 - 380
Target Start/End: Original strand, 35788861 - 35788917
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||||||||||| ||||||| ||| |  |||||| ||||| ||||||||||||||||    
T  35788861 tgttaagagtcccacatcggatagaacatggcctgacaatgtgtttataagtggggg 35788917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 328 - 380
Target Start/End: Complemental strand, 44118972 - 44118920
Alignment:
Q  328 aagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||||||| ||||||| || ||| |||||| ||||| ||||||||||||||||    
T  44118972 aagagtcccacatcggataagagatggcctgacaatgtgtttataagtggggg 44118920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 54; Significance: 9e-22; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 319 - 380
Target Start/End: Complemental strand, 28407915 - 28407854
Alignment:
Q  319 taaactgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||    
T  28407915 taaactgttaagagtcccacatcggttaggaattggcctaacaatttgtttataagtggggg 28407854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 324 - 380
Target Start/End: Complemental strand, 27036529 - 27036473
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||    
T  27036529 tgttaagagtcccacatcggttaggagttggcctgacaatttgtttataagtggggg 27036473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 324 - 380
Target Start/End: Original strand, 32884074 - 32884130
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||    
T  32884074 tgttaagagtcccacatcggttaggagttggcctgacaatttgtttataagtggggg 32884130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 324 - 379
Target Start/End: Complemental strand, 27897722 - 27897667
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtgggg 379  Q
    |||||||||||| ||||||||||||||||||||| |||||||||||||||||||||    
T  27897722 tgttaagagtcccacatcggttaggagttggcctgacaatttgtttataagtgggg 27897667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 324 - 380
Target Start/End: Original strand, 2324207 - 2324263
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||||||||||| |||||||||||||||||| || ||||||||||||||||||||||    
T  2324207 tgttaagagtcccacatcggttaggagttggtctgacaatttgtttataagtggggg 2324263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 324 - 380
Target Start/End: Original strand, 2324441 - 2324497
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||||    
T  2324441 tgttaagagtcccacatcggttagaagttggcctgacaatttgtttataagtggggg 2324497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 324 - 380
Target Start/End: Original strand, 13486300 - 13486356
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||    
T  13486300 tgttaagagtcccacatcggttaggagttggcctgacaatttatttataagtggggg 13486356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 323 - 380
Target Start/End: Complemental strand, 37770061 - 37770004
Alignment:
Q  323 ctgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    ||||||||||||| ||||||||||||||||||  | ||||||||||||||||||||||    
T  37770061 ctgttaagagtcccacatcggttaggagttggtttgacaatttgtttataagtggggg 37770004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 324 - 380
Target Start/End: Original strand, 5509280 - 5509336
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||||||||||| ||||| ||||||||||||||  ||||||||||||||||||||||    
T  5509280 tgttaagagtcccacatcagttaggagttggcccgacaatttgtttataagtggggg 5509336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 324 - 380
Target Start/End: Complemental strand, 17854809 - 17854753
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||||||||||| |||||||||||||||| |||| ||||| ||||||||||||||||    
T  17854809 tgttaagagtcccacatcggttaggagttagcctgacaatctgtttataagtggggg 17854753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 319 - 379
Target Start/End: Complemental strand, 19191732 - 19191672
Alignment:
Q  319 taaactgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtgggg 379  Q
    |||| ||||||||||||  |||||||||||||||||||| ||| |||||||||||||||||    
T  19191732 taaaatgttaagagtcccccatcggttaggagttggcctgacagtttgtttataagtgggg 19191672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 324 - 380
Target Start/End: Original strand, 21591748 - 21591804
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||||||||||| |||||| ||||||||||| || ||||||||||||||||||||||    
T  21591748 tgttaagagtcccacatcgattaggagttggtctgacaatttgtttataagtggggg 21591804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 324 - 376
Target Start/End: Original strand, 29718295 - 29718347
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtg 376  Q
    |||||||||||| ||||||||||||||||||| | ||||||||||||||||||    
T  29718295 tgttaagagtcccacatcggttaggagttggcttgacaatttgtttataagtg 29718347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 324 - 380
Target Start/End: Complemental strand, 36316168 - 36316112
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||||||||||| ||||| ||||| ||||||||| ||||||||||||||||||||||    
T  36316168 tgttaagagtcccacatcagttagaagttggcctgacaatttgtttataagtggggg 36316112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 324 - 376
Target Start/End: Complemental strand, 40718324 - 40718272
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtg 376  Q
    |||||||||||  ||||||||||||||||| ||||||||||||||||||||||    
T  40718324 tgttaagagtctcacatcggttaggagttgacctaacaatttgtttataagtg 40718272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 326 - 380
Target Start/End: Original strand, 5509048 - 5509102
Alignment:
Q  326 ttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||||||||  |||||||||||||||||| || ||||||||||||||||||||||    
T  5509048 ttaagagtcacacatcggttaggagttggtctgacaatttgtttataagtggggg 5509102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 319 - 376
Target Start/End: Complemental strand, 17855051 - 17854994
Alignment:
Q  319 taaactgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtg 376  Q
    |||| |||||||||||  ||||||||||||||||| ||| ||||||||||||||||||    
T  17855051 taaagtgttaagagtctcacatcggttaggagttgacctgacaatttgtttataagtg 17854994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 324 - 380
Target Start/End: Original strand, 8424855 - 8424911
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||||| ||||| ||||| |||||||||||| || ||||||| ||||||||||||||    
T  8424855 tgttaaaagtcccacatcagttaggagttggtctgacaatttatttataagtggggg 8424911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 324 - 380
Target Start/End: Original strand, 16533514 - 16533570
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||||||||||||||| ||| |||| | |||||| ||||| ||||||||||||||||    
T  16533514 tgttaagagtcctacaccggataggtgatggcctgacaatgtgtttataagtggggg 16533570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 324 - 380
Target Start/End: Original strand, 17719367 - 17719423
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||||||||||| ||||||| |||| | |||||| ||||| ||||||||||||||||    
T  17719367 tgttaagagtcccacatcggataggtgatggcctgacaatgtgtttataagtggggg 17719423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 324 - 379
Target Start/End: Complemental strand, 37812385 - 37812330
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtgggg 379  Q
    |||||||||||| ||||||| |||||  |||||| ||||| |||||||||||||||    
T  37812385 tgttaagagtcccacatcggataggacatggcctgacaatgtgtttataagtgggg 37812330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 323 - 380
Target Start/End: Complemental strand, 40379562 - 40379505
Alignment:
Q  323 ctgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    ||||||||||||| ||||||| |||| | |||||| ||| | ||||||||||||||||    
T  40379562 ctgttaagagtcccacatcggataggtgatggcctgacagtgtgtttataagtggggg 40379505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 324 - 380
Target Start/End: Complemental strand, 94137 - 94081
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||||||||||| ||||||| |||| | |||||| ||| | ||||||||||||||||    
T  94137 tgttaagagtcccacatcggataggtgatggcctgacagtgtgtttataagtggggg 94081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 324 - 380
Target Start/End: Original strand, 4662198 - 4662254
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||||||||||| ||||||| |||||  || ||| ||||| ||||||||||||||||    
T  4662198 tgttaagagtcccacatcggataggacatgacctgacaatatgtttataagtggggg 4662254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 324 - 380
Target Start/End: Complemental strand, 5711556 - 5711500
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||||||||||| |||||||  ||||  |||||| ||||| ||||||||||||||||    
T  5711556 tgttaagagtcccacatcggaaaggaaatggcctgacaatgtgtttataagtggggg 5711500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 324 - 380
Target Start/End: Complemental strand, 5711792 - 5711736
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||||||||||| |||||||  ||||  |||||| ||||| ||||||||||||||||    
T  5711792 tgttaagagtcccacatcggacaggacatggcctgacaatgtgtttataagtggggg 5711736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 324 - 380
Target Start/End: Complemental strand, 14466292 - 14466236
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||||||||| | |||||||  ||||  |||||||||||| ||||||||||||||||    
T  14466292 tgttaagagttccacatcggacaggacatggcctaacaatgtgtttataagtggggg 14466236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 322 - 378
Target Start/End: Complemental strand, 14466529 - 14466473
Alignment:
Q  322 actgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggg 378  Q
    |||||||||||||| |||||||  ||||  |||||| ||||| ||||||||||||||    
T  14466529 actgttaagagtcccacatcggacaggacatggcctgacaatgtgtttataagtggg 14466473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 324 - 380
Target Start/End: Original strand, 16419469 - 16419525
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||||||||||| ||||||| |||||  ||| || ||||| ||||||||||||||||    
T  16419469 tgttaagagtcccacatcggataggacatggtctgacaatgtgtttataagtggggg 16419525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 324 - 380
Target Start/End: Complemental strand, 33606171 - 33606115
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||||||||||| ||||||| |||||| |||||| | ||| ||||||||||| ||||    
T  33606171 tgttaagagtcccacatcggataggagatggcctgaaaatgtgtttataagtagggg 33606115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 324 - 380
Target Start/End: Complemental strand, 40379326 - 40379270
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||||||||||| ||||||| |||| | |||||| ||| | ||||||||||||||||    
T  40379326 tgttaagagtcccacatcggataggtgatggcctgacagtgtgtttataagtggggg 40379270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 53; Significance: 4e-21; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 322 - 382
Target Start/End: Original strand, 27653182 - 27653242
Alignment:
Q  322 actgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtgggggaa 382  Q
    |||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  27653182 actgttaagagtcccacatcggttaggagttggcctgacaatttgtttataagtgggggaa 27653242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 324 - 382
Target Start/End: Original strand, 27656425 - 27656483
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtgggggaa 382  Q
    |||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  27656425 tgttaagagtcccacatcggttaggagttggcctgacaatttgtttataagtgggggaa 27656483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 324 - 380
Target Start/End: Original strand, 27772913 - 27772969
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||    
T  27772913 tgttaagagtcccacatcggttaggagttggcctgacaatttgtttataagtggggg 27772969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 322 - 380
Target Start/End: Original strand, 27772679 - 27772737
Alignment:
Q  322 actgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||||||||| ||| ||||||||||||||||||||| ||||||||||||||||||||||    
T  27772679 actgttaagattcccacatcggttaggagttggcctgacaatttgtttataagtggggg 27772737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 324 - 380
Target Start/End: Original strand, 19712919 - 19712975
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||||||||| | ||||||||||||||||||||| ||||||||||||||||||||||    
T  19712919 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtggggg 19712975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 324 - 380
Target Start/End: Original strand, 21690689 - 21690745
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||||||||||| ||||||||||||| ||||||| ||||||||||||||||||||||    
T  21690689 tgttaagagtcccacatcggttaggatttggcctgacaatttgtttataagtggggg 21690745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 324 - 380
Target Start/End: Original strand, 8026356 - 8026412
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||||||||||| || ||||||| |||||||||| ||||||||||||||||||||||    
T  8026356 tgttaagagtcccacgtcggttatgagttggcctgacaatttgtttataagtggggg 8026412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 324 - 380
Target Start/End: Original strand, 15600903 - 15600959
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||||||||||| |||||||||||||||||| || | ||||||||||||||||||||    
T  15600903 tgttaagagtcccacatcggttaggagttggtctgataatttgtttataagtggggg 15600959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 324 - 380
Target Start/End: Complemental strand, 5572732 - 5572676
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||||||| ||| |||||| |||||||||||| | ||||||||||||||||||||||    
T  5572732 tgttaagaatcccacatcgtttaggagttggcatgacaatttgtttataagtggggg 5572676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 324 - 380
Target Start/End: Complemental strand, 28868074 - 28868018
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||||||||||| |||||||||| |||||| ||| ||||||| ||||||||||||||    
T  28868074 tgttaagagtcccacatcggttacgagttgacctgacaatttatttataagtggggg 28868018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 343 - 380
Target Start/End: Original strand, 11721891 - 11721928
Alignment:
Q  343 gttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||||||||||| |||||||||||||||||||||||||    
T  11721891 gttaggagttggtctaacaatttgtttataagtggggg 11721928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 324 - 380
Target Start/End: Complemental strand, 5572501 - 5572445
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||||| ||||  |||||||||||||||| |||| ||||||||||||||||| ||||    
T  5572501 tgttaaaagtctcacatcggttaggagtttgcctgacaatttgtttataagttgggg 5572445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 324 - 380
Target Start/End: Original strand, 7915817 - 7915873
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||||||||||| |||| || ||| ||||||||| ||||| ||||||||||||||||    
T  7915817 tgttaagagtccaacattggatagaagttggcctgacaatgtgtttataagtggggg 7915873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 324 - 380
Target Start/End: Original strand, 9705221 - 9705277
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||||||||||| ||||||| |||||  |||| ||||||| ||||||||||||||||    
T  9705221 tgttaagagtcccacatcggataggacatggcttaacaatgtgtttataagtggggg 9705277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 385
Target Start/End: Complemental strand, 12330407 - 12330346
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtgggggaatcc 385  Q
    |||||||||||| ||||||| |||||  ||| || ||||| ||||||||||||||| |||||    
T  12330407 tgttaagagtcccacatcggataggacatggtctgacaatgtgtttataagtggggcaatcc 12330346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 323 - 380
Target Start/End: Original strand, 13353167 - 13353224
Alignment:
Q  323 ctgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    ||||||||||||| |||||||  ||||  |||||| ||||| ||||||||||||||||    
T  13353167 ctgttaagagtcccacatcggacaggacatggcctgacaatgtgtttataagtggggg 13353224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 324 - 380
Target Start/End: Complemental strand, 4868694 - 4868638
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||||||||||| |||||||  ||||  |||||| ||||| ||||||||||||||||    
T  4868694 tgttaagagtcccacatcggacaggacatggcctgacaatgtgtttataagtggggg 4868638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 326 - 378
Target Start/End: Original strand, 13740885 - 13740937
Alignment:
Q  326 ttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggg 378  Q
    |||||||| | ||||||| || | |||||||| ||||||||||||||||||||    
T  13740885 ttaagagttccacatcggatatgtgttggcctgacaatttgtttataagtggg 13740937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 326 - 378
Target Start/End: Original strand, 13746385 - 13746437
Alignment:
Q  326 ttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggg 378  Q
    |||||||| | ||||||| || | |||||||| ||||||||||||||||||||    
T  13746385 ttaagagttccacatcggatatgtgttggcctgacaatttgtttataagtggg 13746437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 324 - 380
Target Start/End: Complemental strand, 15082025 - 15081969
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||||||||||| ||| |||||||||| ||| || ||||| |||||| |||||||||    
T  15082025 tgttaagagtcccacaacggttaggagatggactgacaatatgtttacaagtggggg 15081969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 324 - 380
Target Start/End: Original strand, 24554084 - 24554140
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||||||||||| ||||||| |||||| ||| || ||||| | ||||||||||||||    
T  24554084 tgttaagagtcccacatcggataggagatggtctgacaatatatttataagtggggg 24554140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 324 - 380
Target Start/End: Original strand, 33494506 - 33494562
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||||||||||| ||||||| |||||| |||| | | ||| ||||||||||||||||    
T  33494506 tgttaagagtcccacatcggataggagatggcttgaaaatatgtttataagtggggg 33494562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 324 - 380
Target Start/End: Original strand, 33796293 - 33796349
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||||||||||| |||||||  ||||  |||||| ||||| ||||||||||||||||    
T  33796293 tgttaagagtcccacatcggacaggacatggcctgacaatgtgtttataagtggggg 33796349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1034 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold1034
Description:

Target: scaffold1034; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 323 - 380
Target Start/End: Original strand, 3202 - 3259
Alignment:
Q  323 ctgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    ||||||||||||||||||||||||||||||||||| || |||||||||||||||||||    
T  3202 ctgttaagagtcctacatcggttaggagttggccttactatttgtttataagtggggg 3259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 50; Significance: 2e-19; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 324 - 385
Target Start/End: Original strand, 8098285 - 8098346
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtgggggaatcc 385  Q
    |||||||||||| ||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  8098285 tgttaagagtcccacatcggttaggagttggcctgacaatttgtttataagtggggcaatcc 8098346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 324 - 379
Target Start/End: Complemental strand, 21210038 - 21209983
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtgggg 379  Q
    |||||||||||| ||||||||||||||||||||| |||||||||||||||||||||    
T  21210038 tgttaagagtcccacatcggttaggagttggcctgacaatttgtttataagtgggg 21209983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 324 - 374
Target Start/End: Original strand, 8098518 - 8098568
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataag 374  Q
    |||||||||||| ||||||||||||||||||||| ||||||||||||||||    
T  8098518 tgttaagagtcccacatcggttaggagttggcctgacaatttgtttataag 8098568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 324 - 377
Target Start/End: Complemental strand, 29909604 - 29909551
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtgg 377  Q
    |||||||||||| ||||||||||||||||||||| ||||||| |||||||||||    
T  29909604 tgttaagagtccgacatcggttaggagttggcctgacaatttatttataagtgg 29909551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 324 - 380
Target Start/End: Original strand, 13296859 - 13296915
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    ||||||||||||  ||||||||||||||||| || ||||||||||||||||||||||    
T  13296859 tgttaagagtcccgcatcggttaggagttggtctgacaatttgtttataagtggggg 13296915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 324 - 376
Target Start/End: Complemental strand, 27133110 - 27133058
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtg 376  Q
    |||||||||||  ||||||||||||||||||||| ||||||||||||||||||    
T  27133110 tgttaagagtctcacatcggttaggagttggcctgacaatttgtttataagtg 27133058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 324 - 379
Target Start/End: Original strand, 19522288 - 19522343
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtgggg 379  Q
    |||||||||||| |||||||||||||||||| || ||||||| |||||||||||||    
T  19522288 tgttaagagtcccacatcggttaggagttggactgacaatttatttataagtgggg 19522343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 324 - 378
Target Start/End: Original strand, 42295546 - 42295600
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggg 378  Q
    |||||||||||| ||||| ||||||||||||||| | ||||||||||||||||||    
T  42295546 tgttaagagtcccacatcagttaggagttggcctgataatttgtttataagtggg 42295600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 320 - 377
Target Start/End: Original strand, 9368558 - 9368615
Alignment:
Q  320 aaactgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtgg 377  Q
    ||||||||||||||| |||||||| |||||| |||| | ||||| |||||||||||||    
T  9368558 aaactgttaagagtcatacatcggataggagatggcgtgacaatgtgtttataagtgg 9368615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 324 - 385
Target Start/End: Complemental strand, 24269987 - 24269926
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtgggggaatcc 385  Q
    |||||||||||| ||||||| |||||  |||||| ||||| ||||||||||||||| |||||    
T  24269987 tgttaagagtcccacatcggataggacatggcctgacaatgtgtttataagtggggtaatcc 24269926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 324 - 380
Target Start/End: Complemental strand, 4481680 - 4481624
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||||||||||| ||||||| ||| ||||||||| ||||| ||||||||| ||||||    
T  4481680 tgttaagagtcccacatcggatagaagttggcctgacaatgtgtttataaatggggg 4481624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 324 - 380
Target Start/End: Original strand, 6637570 - 6637625
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||||||||||| |||||||||||||  |||||| ||||| ||||||||||||||||    
T  6637570 tgttaagagtcc-acatcggttaggaaatggcctgacaatgtgtttataagtggggg 6637625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 324 - 380
Target Start/End: Complemental strand, 8081231 - 8081175
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||||||||||| ||||||| |||||  |||||| ||||| ||||||||||||||||    
T  8081231 tgttaagagtcccacatcggataggacatggcctgacaatgtgtttataagtggggg 8081175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 324 - 364
Target Start/End: Complemental strand, 21209804 - 21209764
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatt 364  Q
    |||||||||||| ||||||||||||||||||||| ||||||    
T  21209804 tgttaagagtcccacatcggttaggagttggcctgacaatt 21209764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 324 - 380
Target Start/End: Complemental strand, 24346618 - 24346562
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||||||||||| ||||||| |||||  |||||| ||||| ||||||||||||||||    
T  24346618 tgttaagagtcccacatcggataggacatggcctgacaatgtgtttataagtggggg 24346562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 324 - 380
Target Start/End: Complemental strand, 24487762 - 24487706
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||||||||||  |||||||||||||||||| || | ||| ||||||||||||||||    
T  24487762 tgttaagagtctcacatcggttaggagttggtctgaaaatatgtttataagtggggg 24487706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 326 - 385
Target Start/End: Original strand, 8287771 - 8287830
Alignment:
Q  326 ttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtgggggaatcc 385  Q
    |||||||||  ||||||| |||||||||| ||  |||||||||||||||||||| |||||    
T  8287771 ttaagagtcacacatcggctaggagttggtctggcaatttgtttataagtggggcaatcc 8287830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 324 - 378
Target Start/End: Original strand, 6637804 - 6637858
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggg 378  Q
    |||||||||||| |||||||||||||| || ||| ||||| ||| ||||||||||    
T  6637804 tgttaagagtcccacatcggttaggagatgacctgacaatgtgtctataagtggg 6637858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 326 - 380
Target Start/End: Original strand, 9368799 - 9368853
Alignment:
Q  326 ttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||||||||| ||||||| |||||| |||| | ||||| ||||||||||||||||    
T  9368799 ttaagagtcccacatcggataggagatggcatgacaatgtgtttataagtggggg 9368853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 324 - 380
Target Start/End: Complemental strand, 18333582 - 18333526
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||||||| ||| ||||||| |||||| ||| || ||||| ||||||||||||||||    
T  18333582 tgttaagaatcccacatcggataggagatggtctgacaatgtgtttataagtggggg 18333526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 324 - 380
Target Start/End: Original strand, 19705870 - 19705926
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||||||||||| ||||||| |||||  | |||| ||||| ||||||||||||||||    
T  19705870 tgttaagagtcccacatcgggtaggacatagcctgacaatgtgtttataagtggggg 19705926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 324 - 380
Target Start/End: Complemental strand, 20510759 - 20510703
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    ||||||||| || ||||||| |||| | |||||| ||||| ||||||||||||||||    
T  20510759 tgttaagagccccacatcggataggtgatggcctgacaatatgtttataagtggggg 20510703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 324 - 380
Target Start/End: Complemental strand, 33337355 - 33337299
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||||||||||| |||| || |||| | |||||| ||||| ||||||||||||||||    
T  33337355 tgttaagagtcccacattggataggtgatggcctgacaatatgtttataagtggggg 33337299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 324 - 380
Target Start/End: Complemental strand, 41666874 - 41666818
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||||||||||| |||||||  ||||  |||||| ||||| ||||||||||||||||    
T  41666874 tgttaagagtcccacatcggacaggacatggcctgacaatgtgtttataagtggggg 41666818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 324 - 380
Target Start/End: Complemental strand, 41667110 - 41667054
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||||||||||| |||||||  ||||  |||||| ||||| ||||||||||||||||    
T  41667110 tgttaagagtcccacatcggacaggacatggcctgacaatgtgtttataagtggggg 41667054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 49; Significance: 9e-19; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 324 - 380
Target Start/End: Complemental strand, 20327966 - 20327910
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||    
T  20327966 tgttaagagtcccacatcggttaggagttggcctgacaatttgtttataagtggggg 20327910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 324 - 380
Target Start/End: Complemental strand, 28087336 - 28087280
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||||||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  28087336 tgttaagagtctcacatcggttaggagttggcctaacaatttgtttataagtggggg 28087280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 324 - 377
Target Start/End: Complemental strand, 6487450 - 6487397
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtgg 377  Q
    |||||||||||| ||||||||||||||||||||| |||||||||||||||||||    
T  6487450 tgttaagagtcccacatcggttaggagttggcctgacaatttgtttataagtgg 6487397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 324 - 385
Target Start/End: Original strand, 17638202 - 17638263
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtgggggaatcc 385  Q
    |||||||||| | ||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  17638202 tgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtggggcaatcc 17638263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 324 - 380
Target Start/End: Original strand, 11589752 - 11589808
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||||||||||  ||||||||||||||||||||| ||||||||||||||||||||||    
T  11589752 tgttaagagtctcacatcggttaggagttggcctgacaatttgtttataagtggggg 11589808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 324 - 380
Target Start/End: Complemental strand, 23691309 - 23691253
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||||||||||| |||||||||||||||| |||| ||||||||||||||||||||||    
T  23691309 tgttaagagtcccacatcggttaggagttagcctgacaatttgtttataagtggggg 23691253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 324 - 380
Target Start/End: Complemental strand, 23708109 - 23708053
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||||||||||| |||||||||||||||| |||| ||||||||||||||||||||||    
T  23708109 tgttaagagtcccacatcggttaggagttagcctgacaatttgtttataagtggggg 23708053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 324 - 380
Target Start/End: Complemental strand, 23726565 - 23726509
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||||||||||| |||||||||||||||| |||| ||||||||||||||||||||||    
T  23726565 tgttaagagtcccacatcggttaggagttagcctgacaatttgtttataagtggggg 23726509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 324 - 380
Target Start/End: Complemental strand, 23745021 - 23744965
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||||||||||| |||||||||||||||| |||| ||||||||||||||||||||||    
T  23745021 tgttaagagtcccacatcggttaggagttagcctgacaatttgtttataagtggggg 23744965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 324 - 380
Target Start/End: Complemental strand, 24063546 - 24063490
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||||||||||| |||||||||||||||| |||| ||||||||||||||||||||||    
T  24063546 tgttaagagtcccacatcggttaggagttagcctgacaatttgtttataagtggggg 24063490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 324 - 385
Target Start/End: Original strand, 17638375 - 17638436
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtgggggaatcc 385  Q
    |||||||||||| ||||||||||| || |||||| ||||||||||||||||||||| |||||    
T  17638375 tgttaagagtcccacatcggttagaagctggcctgacaatttgtttataagtggggcaatcc 17638436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 324 - 380
Target Start/End: Complemental strand, 1723192 - 1723137
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||||    
T  1723192 tgttaagagtcccacatcggttag-agttggcctgacaatttgtttataagtggggg 1723137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 324 - 380
Target Start/End: Original strand, 9273162 - 9273218
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||||||||||| ||||||||||||| |||| || ||||||||||||||||||||||    
T  9273162 tgttaagagtcccacatcggttaggaattggtctgacaatttgtttataagtggggg 9273218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 324 - 378
Target Start/End: Original strand, 8018935 - 8018989
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggg 378  Q
    |||||||||||| ||||||||||| ||||||||| | ||||||||||||||||||    
T  8018935 tgttaagagtcccacatcggttagaagttggcctgaaaatttgtttataagtggg 8018989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 324 - 380
Target Start/End: Original strand, 9272928 - 9272984
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||||||||||  ||||||||||||| ||||||| | ||||||||||||||||||||    
T  9272928 tgttaagagtctcacatcggttaggaattggcctgataatttgtttataagtggggg 9272984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 324 - 380
Target Start/End: Complemental strand, 23708341 - 23708285
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||||||||||| ||||| |||||||||| | || ||||||||||||||||||||||    
T  23708341 tgttaagagtcccacatcagttaggagttagtctgacaatttgtttataagtggggg 23708285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 324 - 380
Target Start/End: Complemental strand, 23726797 - 23726741
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||||||||||| ||||| |||||||||| | || ||||||||||||||||||||||    
T  23726797 tgttaagagtcccacatcagttaggagttagtctgacaatttgtttataagtggggg 23726741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 324 - 380
Target Start/End: Complemental strand, 23745253 - 23745197
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||||||||||| ||||| |||||||||| | || ||||||||||||||||||||||    
T  23745253 tgttaagagtcccacatcagttaggagttagtctgacaatttgtttataagtggggg 23745197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 324 - 380
Target Start/End: Complemental strand, 27670509 - 27670453
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||||||||||| |||||||| |||| ||||||| |||| |||||||||||||||||    
T  27670509 tgttaagagtcccacatcggtcaggaattggcctgacaaattgtttataagtggggg 27670453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 322 - 382
Target Start/End: Original strand, 54567857 - 54567917
Alignment:
Q  322 actgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtgggggaa 382  Q
    |||||||||||||||| ||||| |||||  |||||| ||||| ||||||||||||||||||    
T  54567857 actgttaagagtcctatatcggataggacatggcctgacaatgtgtttataagtgggggaa 54567917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 382
Target Start/End: Complemental strand, 35038311 - 35038253
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtgggggaa 382  Q
    |||||||||||| ||||||| |||| | |||||| ||||| ||||||||||||||||||    
T  35038311 tgttaagagtcccacatcggataggtgatggcctgacaatgtgtttataagtgggggaa 35038253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 324 - 380
Target Start/End: Complemental strand, 35038545 - 35038489
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||||||||||| ||||||| |||| | |||||| ||||| ||||||||||||||||    
T  35038545 tgttaagagtcccacatcggataggtgatggcctgacaatgtgtttataagtggggg 35038489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 319 - 376
Target Start/End: Complemental strand, 38791572 - 38791515
Alignment:
Q  319 taaactgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtg 376  Q
    ||||||||||||||||| ||||||| |||||| ||| || ||||| | ||||||||||    
T  38791572 taaactgttaagagtcccacatcggataggagatggtctgacaatgtatttataagtg 38791515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 324 - 380
Target Start/End: Original strand, 16239558 - 16239614
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||||||||||  ||||||| |||||  |||||| ||||| ||||||||||||||||    
T  16239558 tgttaagagtctcacatcggataggacatggcctgacaatgtgtttataagtggggg 16239614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 324 - 380
Target Start/End: Complemental strand, 16927066 - 16927010
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||||||||||| ||||||| ||| |  |||||| ||||| ||||||||||||||||    
T  16927066 tgttaagagtcccacatcggatagaacatggcctgacaatgtgtttataagtggggg 16927010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 324 - 380
Target Start/End: Original strand, 34992517 - 34992573
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||||||||||| ||||||| |||| | ||| || ||||| ||||||||||||||||    
T  34992517 tgttaagagtcccacatcggataggtgatggtctgacaatgtgtttataagtggggg 34992573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 47; Significance: 1e-17; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 323 - 377
Target Start/End: Complemental strand, 36206181 - 36206127
Alignment:
Q  323 ctgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtgg 377  Q
    ||||||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  36206181 ctgttaagagttccacatcggttaggagttggcctaacaatttgtttataagtgg 36206127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 324 - 382
Target Start/End: Original strand, 40746465 - 40746523
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtgggggaa 382  Q
    |||||||||||| |||| |||||||||||||||| ||||||||||||||||||||||||    
T  40746465 tgttaagagtcccacattggttaggagttggcctgacaatttgtttataagtgggggaa 40746523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 324 - 380
Target Start/End: Complemental strand, 2544332 - 2544276
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||||||||||| |||||||||||||||||| || ||||||||||||||||||||||    
T  2544332 tgttaagagtcccacatcggttaggagttggtctgacaatttgtttataagtggggg 2544276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 324 - 380
Target Start/End: Complemental strand, 2544564 - 2544508
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||||||||||| || |||||||||||||||||| ||||||||||||||||||||||    
T  2544564 tgttaagagtcccacgtcggttaggagttggcctgacaatttgtttataagtggggg 2544508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 324 - 380
Target Start/End: Original strand, 4267821 - 4267877
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||||||||||| |||||||||||||||||| || ||||||||||||||||||||||    
T  4267821 tgttaagagtcccacatcggttaggagttggtctgacaatttgtttataagtggggg 4267877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 324 - 380
Target Start/End: Original strand, 4268021 - 4268077
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||||||||||| ||||| ||||||||||||||| ||||||||||||||||||||||    
T  4268021 tgttaagagtcccacatcagttaggagttggcctgacaatttgtttataagtggggg 4268077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 324 - 380
Target Start/End: Original strand, 6634822 - 6634878
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||||||||||  ||||||||||||||||||||| ||||||||||||||||||||||    
T  6634822 tgttaagagtctcacatcggttaggagttggcctgacaatttgtttataagtggggg 6634878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 324 - 380
Target Start/End: Original strand, 17202146 - 17202202
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||||||||||| |||||||||| |||||||||| ||||||||||||||||||||||    
T  17202146 tgttaagagtcccacatcggttaagagttggcctgacaatttgtttataagtggggg 17202202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 324 - 380
Target Start/End: Complemental strand, 26562190 - 26562134
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||||||||||  ||||||||||||||||||||| ||||||||||||||||||||||    
T  26562190 tgttaagagtctcacatcggttaggagttggcctgacaatttgtttataagtggggg 26562134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 324 - 380
Target Start/End: Original strand, 34027360 - 34027416
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||||||| ||| ||||||||||||||||||||| ||||||||||||||||||||||    
T  34027360 tgttaagaatcccacatcggttaggagttggcctgacaatttgtttataagtggggg 34027416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 324 - 380
Target Start/End: Original strand, 34027594 - 34027650
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||||||||||| ||||| ||||| ||||||||| ||||||||||||||||||||||    
T  34027594 tgttaagagtcccacatcagttagaagttggcctgacaatttgtttataagtggggg 34027650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 325 - 378
Target Start/End: Complemental strand, 26029077 - 26029024
Alignment:
Q  325 gttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggg 378  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||| ||| ||||    
T  26029077 gttaagagtcctacatcggttaggagttggcctgacaatttatttttaaatggg 26029024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 324 - 380
Target Start/End: Complemental strand, 2404291 - 2404235
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||||||||||| |||||||||||||| ||| || ||||| ||||||||||||||||    
T  2404291 tgttaagagtcccacatcggttaggagatggactgacaatgtgtttataagtggggg 2404235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 326 - 380
Target Start/End: Complemental strand, 31257146 - 31257092
Alignment:
Q  326 ttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||||||||  ||||||||||| |||||| || ||||||||||||||||||||||    
T  31257146 ttaagagtctcacatcggttagaagttggtctgacaatttgtttataagtggggg 31257092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 324 - 380
Target Start/End: Complemental strand, 3519842 - 3519786
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||||||||||| ||||||| |||| | |||||| ||||| ||||||||||||||||    
T  3519842 tgttaagagtcccacatcggataggtgatggcctgacaatgtgtttataagtggggg 3519786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 324 - 380
Target Start/End: Complemental strand, 31257384 - 31257328
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    ||||||| |||  |||||||||||||||||| || ||||||| ||||||||||||||    
T  31257384 tgttaagcgtctcacatcggttaggagttggtctgacaatttatttataagtggggg 31257328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 324 - 380
Target Start/End: Complemental strand, 43688276 - 43688220
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||||||||||| ||||||| |||||  |||||| ||||| ||||||||||||||||    
T  43688276 tgttaagagtcccacatcggataggacatggcctgacaatgtgtttataagtggggg 43688220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 337 - 376
Target Start/End: Original strand, 40746245 - 40746284
Alignment:
Q  337 acatcggttaggagttggcctaacaatttgtttataagtg 376  Q
    |||| |||||||||||||||| ||||||||||||||||||    
T  40746245 acattggttaggagttggcctgacaatttgtttataagtg 40746284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 322 - 380
Target Start/End: Original strand, 47710408 - 47710466
Alignment:
Q  322 actgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||||||||||||  ||||||| |||| | |||||| ||||| ||||||||||||||||    
T  47710408 actgttaagagtctcacatcggataggtgatggccttacaatgtgtttataagtggggg 47710466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 322 - 380
Target Start/End: Original strand, 47722064 - 47722122
Alignment:
Q  322 actgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||||||||||||  ||||||| |||| | |||||| ||||| ||||||||||||||||    
T  47722064 actgttaagagtctcacatcggataggtgatggccttacaatgtgtttataagtggggg 47722122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 323 - 380
Target Start/End: Original strand, 29469571 - 29469628
Alignment:
Q  323 ctgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    ||||||||||||| |||||||  ||||  |||||| ||||| ||||||||||||||||    
T  29469571 ctgttaagagtcccacatcggacaggacatggcctgacaatgtgtttataagtggggg 29469628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 325 - 382
Target Start/End: Complemental strand, 44874462 - 44874405
Alignment:
Q  325 gttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtgggggaa 382  Q
    ||||||||||| ||||||| |||||| |  ||| ||||| ||||||||||||||||||    
T  44874462 gttaagagtcccacatcggataggagataacctgacaatgtgtttataagtgggggaa 44874405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 324 - 380
Target Start/End: Original strand, 1596795 - 1596851
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||||||||||| |||||||  ||||  |||||||||||| | ||||||||||||||    
T  1596795 tgttaagagtcccacatcggacaggacatggcctaacaatgtttttataagtggggg 1596851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 324 - 380
Target Start/End: Complemental strand, 6001552 - 6001496
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||||||||||| ||||||| ||| || || ||| ||||| ||||||||||||||||    
T  6001552 tgttaagagtcccacatcggatagaagatgacctgacaatatgtttataagtggggg 6001496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 328 - 380
Target Start/End: Complemental strand, 10882118 - 10882066
Alignment:
Q  328 aagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||||||| |||| | | |||||||||| | ||||||||||||||||||||||    
T  10882118 aagagtcccacattgataaggagttggcatgacaatttgtttataagtggggg 10882066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 324 - 356
Target Start/End: Original strand, 17202350 - 17202382
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcc 356  Q
    |||||||||||| ||||||||||||||||||||    
T  17202350 tgttaagagtcccacatcggttaggagttggcc 17202382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 324 - 380
Target Start/End: Complemental strand, 18826605 - 18826549
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||||||||||| |||| || |||||| || ||| ||||| ||||||||||||||||    
T  18826605 tgttaagagtcccacattggataggagatgacctgacaatgtgtttataagtggggg 18826549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 324 - 380
Target Start/End: Complemental strand, 21055070 - 21055014
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||||||||||| | ||||| |||| | |||||| ||||| ||||||||||||||||    
T  21055070 tgttaagagtcccatatcggataggtgatggcctgacaatatgtttataagtggggg 21055014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 324 - 380
Target Start/End: Complemental strand, 26240033 - 26239977
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||||||||||| ||||||| |||||  ||| || ||||| ||||||||||||||||    
T  26240033 tgttaagagtccgacatcggataggacatggtctgacaatgtgtttataagtggggg 26239977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 324 - 380
Target Start/End: Original strand, 29469807 - 29469863
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||||||||||| |||||||  ||||  |||||| ||||| ||||||||||||||||    
T  29469807 tgttaagagtcccacatcggacaggacatggcctgacaatgtgtttataagtggggg 29469863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 46; Significance: 5e-17; HSPs: 21)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 324 - 385
Target Start/End: Original strand, 52127688 - 52127749
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtgggggaatcc 385  Q
    |||||||||||| ||||||||||||||||| ||||| ||||||||||||||||||| |||||    
T  52127688 tgttaagagtcccacatcggttaggagttgacctaagaatttgtttataagtggggcaatcc 52127749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 324 - 380
Target Start/End: Original strand, 3169733 - 3169789
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||||||||||| |||||||||||||||||| || ||||||||||||||||||||||    
T  3169733 tgttaagagtcccacatcggttaggagttggtctgacaatttgtttataagtggggg 3169789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 325 - 375
Target Start/End: Complemental strand, 25137419 - 25137369
Alignment:
Q  325 gttaagagtcctacatcggttaggagttggcctaacaatttgtttataagt 375  Q
    ||||||||||| ||||||||||||||||||||| |||||||||||||||||    
T  25137419 gttaagagtcccacatcggttaggagttggcctgacaatttgtttataagt 25137369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 324 - 380
Target Start/End: Complemental strand, 12245079 - 12245023
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    ||||||||||||||||||| ||||||||||| ||  |||||||||||||||||||||    
T  12245079 tgttaagagtcctacatcgattaggagttggtctggcaatttgtttataagtggggg 12245023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 324 - 376
Target Start/End: Original strand, 51588959 - 51589011
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtg 376  Q
    |||||||||||| |||||||||||||||||| || ||||||||||||||||||    
T  51588959 tgttaagagtcccacatcggttaggagttggtctgacaatttgtttataagtg 51589011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 324 - 376
Target Start/End: Original strand, 51589193 - 51589245
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtg 376  Q
    |||||||||||| |||||||||||||||||| || ||||||||||||||||||    
T  51589193 tgttaagagtcccacatcggttaggagttggtctgacaatttgtttataagtg 51589245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 324 - 379
Target Start/End: Complemental strand, 28408159 - 28408104
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtgggg 379  Q
    |||||||||||| ||||||||||| |||||| || |||||||||||||||||||||    
T  28408159 tgttaagagtcccacatcggttagaagttggtctgacaatttgtttataagtgggg 28408104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 324 - 380
Target Start/End: Complemental strand, 15986450 - 15986394
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||||||||||||||||||| |||||| | |||| ||||| ||||||||||||||||    
T  15986450 tgttaagagtcctacatcggataggagatagcctgacaatgtgtttataagtggggg 15986394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 324 - 380
Target Start/End: Original strand, 35772231 - 35772287
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||||||||||| ||||||| |||||| |||||| ||||| ||||||||||||||||    
T  35772231 tgttaagagtcccacatcggataggagatggcctgacaatgtgtttataagtggggg 35772287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 324 - 380
Target Start/End: Complemental strand, 51459947 - 51459891
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||||||||||| ||||||| |||| | |||||||||||| ||||||||||||||||    
T  51459947 tgttaagagtcccacatcggataggtgatggcctaacaatgtgtttataagtggggg 51459891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 324 - 369
Target Start/End: Original strand, 3169967 - 3170012
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgttt 369  Q
    |||||||||||| |||||||||||||||||| || |||||||||||    
T  3169967 tgttaagagtcccacatcggttaggagttggtctgacaatttgttt 3170012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 324 - 376
Target Start/End: Complemental strand, 51460199 - 51460147
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtg 376  Q
    |||||||||||| ||||||| |||| | |||||||||||| ||||||||||||    
T  51460199 tgttaagagtcccacatcggataggtgatggcctaacaatgtgtttataagtg 51460147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 324 - 376
Target Start/End: Original strand, 51590007 - 51590059
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtg 376  Q
    |||||||||||| ||||| |||||||||| | || ||||||||||||||||||    
T  51590007 tgttaagagtcccacatcagttaggagtttgtctgacaatttgtttataagtg 51590059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 329 - 380
Target Start/End: Original strand, 40079124 - 40079175
Alignment:
Q  329 agagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    ||||||||||||||| |||||| || ||| ||||| ||||||||||||||||    
T  40079124 agagtcctacatcggataggagatgacctgacaatgtgtttataagtggggg 40079175  T

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Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 323 - 385
Target Start/End: Original strand, 38080571 - 38080633
Alignment:
Q  323 ctgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtgggggaatcc 385  Q
    ||||||||||||| ||||||| | |||| |||||| ||||| ||||||||| ||||| |||||    
T  38080571 ctgttaagagtcccacatcggatgggagatggcctgacaatgtgtttataattggggcaatcc 38080633  T

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Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 327 - 380
Target Start/End: Complemental strand, 2859506 - 2859453
Alignment:
Q  327 taagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    ||||||||| ||||||| |||| | |||||| ||||| ||||||||||||||||    
T  2859506 taagagtcccacatcggataggtgatggcctgacaatgtgtttataagtggggg 2859453  T

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Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 323 - 380
Target Start/End: Complemental strand, 20208644 - 20208587
Alignment:
Q  323 ctgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    ||||||||||||| ||||||| |||||  ||| || ||||| ||||||||||||||||    
T  20208644 ctgttaagagtcccacatcggataggacatggtctgacaatgtgtttataagtggggg 20208587  T

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Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 324 - 380
Target Start/End: Complemental strand, 4112888 - 4112832
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||||||||||| ||||||| | |||  |||||| ||||| ||||||||||||||||    
T  4112888 tgttaagagtcccacatcggatgggacatggcctgacaatgtgtttataagtggggg 4112832  T

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Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 324 - 380
Target Start/End: Original strand, 25713360 - 25713416
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||||||||||| ||||||| |||| | ||| || ||||| ||||||||||||||||    
T  25713360 tgttaagagtcccacatcggataggtgatggtctgacaatgtgtttataagtggggg 25713416  T

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Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 324 - 380
Target Start/End: Complemental strand, 51459822 - 51459766
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||||||||||| | ||||| |||| | | |||||||||| ||||||||||||||||    
T  51459822 tgttaagagtcccatatcggataggtgatagcctaacaatgtgtttataagtggggg 51459766  T

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Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 324 - 380
Target Start/End: Complemental strand, 52650888 - 52650832
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    ||||| |||||| ||||||| |||||| |||||  ||||| ||||||||||||||||    
T  52650888 tgttaggagtcccacatcggataggagatggccggacaatgtgtttataagtggggg 52650832  T

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Target: scaffold0334 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 324 - 380
Target Start/End: Complemental strand, 4546 - 4490
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||||||||| | ||||| ||||||||||||||| ||||||||||||||||||||||    
T  4546 tgttaagagtgccacatcagttaggagttggcctgacaatttgtttataagtggggg 4490  T

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Target: scaffold0481 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: scaffold0481
Description:

Target: scaffold0481; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 324 - 379
Target Start/End: Complemental strand, 3588 - 3533
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtgggg 379  Q
    |||||||||||| ||||||||||||||||| | | |||||||||||||||||||||    
T  3588 tgttaagagtcccacatcggttaggagttgacatgacaatttgtttataagtgggg 3533  T

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Target: scaffold0481; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 377
Target Start/End: Complemental strand, 3354 - 3301
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtgg 377  Q
    |||||||||||  |||||| |||||||||||||  | |||||||||||||||||    
T  3354 tgttaagagtctcacatcgattaggagttggccagataatttgtttataagtgg 3301  T

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Target: scaffold0005 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 323 - 373
Target Start/End: Original strand, 56425 - 56475
Alignment:
Q  323 ctgttaagagtcctacatcggttaggagttggcctaacaatttgtttataa 373  Q
    ||||||||||||| |||||||||||||||||  || |||||||||||||||    
T  56425 ctgttaagagtcccacatcggttaggagttgatctgacaatttgtttataa 56475  T

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Target: scaffold0001 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 325 - 380
Target Start/End: Original strand, 429841 - 429896
Alignment:
Q  325 gttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    ||||||||||| ||||||| |||| | |||||| ||||| ||||||||||||||||    
T  429841 gttaagagtcccacatcggataggtgatggcctgacaatgtgtttataagtggggg 429896  T

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Target: scaffold0519 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 324 - 380
Target Start/End: Original strand, 2118 - 2174
Alignment:
Q  324 tgttaagagtcctacatcggttaggagttggcctaacaatttgtttataagtggggg 380  Q
    |||||||||||| |||||||  ||||  |||||| ||||| ||||||||||||||||    
T  2118 tgttaagagtcccacatcggacaggacatggcctgacaatgtgtttataagtggggg 2174  T

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