View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8418_low_2 (Length: 367)

Name: NF8418_low_2
Description: NF8418
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8418_low_2
NF8418_low_2
[»] chr1 (43 HSPs)
chr1 (185-353)||(2288050-2288218)
chr1 (1-130)||(2288273-2288402)
chr1 (185-276)||(25452108-25452199)
chr1 (25-71)||(2288398-2288444)
chr1 (185-279)||(13436466-13436563)
chr1 (187-234)||(4849181-4849228)
chr1 (185-239)||(39953141-39953197)
chr1 (185-280)||(22881565-22881667)
chr1 (185-222)||(12713341-12713378)
chr1 (185-222)||(12717432-12717469)
chr1 (185-239)||(14332637-14332693)
chr1 (185-239)||(19637776-19637832)
chr1 (235-280)||(22947806-22947851)
chr1 (229-281)||(29144317-29144369)
chr1 (245-280)||(21365990-21366025)
chr1 (245-279)||(37598917-37598951)
chr1 (185-279)||(41877431-41877521)
chr1 (229-279)||(46940747-46940797)
chr1 (185-239)||(1864875-1864931)
chr1 (8-58)||(4877745-4877797)
chr1 (185-222)||(6427358-6427395)
chr1 (185-277)||(9103648-9103741)
chr1 (185-239)||(9709828-9709884)
chr1 (185-222)||(16164329-16164366)
chr1 (245-278)||(22515827-22515860)
chr1 (185-239)||(22515882-22515938)
chr1 (189-239)||(29163376-29163428)
chr1 (185-222)||(34257924-34257961)
chr1 (245-278)||(35702542-35702575)
chr1 (185-239)||(36878469-36878525)
chr1 (185-239)||(38078656-38078712)
chr1 (185-239)||(39130762-39130818)
chr1 (185-239)||(40181879-40181935)
chr1 (185-222)||(41017418-41017455)
chr1 (245-278)||(47989594-47989627)
chr1 (185-239)||(52903257-52903313)
chr1 (245-281)||(9828141-9828177)
chr1 (189-234)||(25272494-25272541)
chr1 (195-240)||(30749858-30749905)
chr1 (195-240)||(30771309-30771356)
chr1 (235-279)||(31694638-31694682)
chr1 (185-221)||(32461478-32461514)
chr1 (245-281)||(40917846-40917882)
[»] chr4 (29 HSPs)
chr4 (185-277)||(17425348-17425440)
chr4 (185-240)||(33950144-33950201)
chr4 (187-234)||(2234260-2234307)
chr4 (185-222)||(7214536-7214573)
chr4 (190-222)||(17344513-17344545)
chr4 (223-279)||(30094077-30094133)
chr4 (245-280)||(3064866-3064901)
chr4 (187-222)||(13134460-13134495)
chr4 (245-279)||(5775303-5775337)
chr4 (185-219)||(17446079-17446113)
chr4 (245-278)||(715545-715578)
chr4 (245-278)||(752871-752904)
chr4 (185-239)||(8423713-8423769)
chr4 (185-239)||(12895269-12895325)
chr4 (185-222)||(18491893-18491930)
chr4 (223-280)||(20633535-20633592)
chr4 (185-222)||(21539881-21539918)
chr4 (245-278)||(23292926-23292959)
chr4 (185-239)||(54580018-54580074)
chr4 (185-234)||(56257941-56257990)
chr4 (245-277)||(4383452-4383484)
chr4 (245-281)||(11596294-11596330)
chr4 (230-278)||(12708213-12708261)
chr4 (187-227)||(26276018-26276058)
chr4 (185-221)||(27706192-27706228)
chr4 (185-237)||(32510773-32510825)
chr4 (245-277)||(40965357-40965389)
chr4 (185-221)||(41989572-41989608)
chr4 (185-221)||(43506176-43506212)
[»] chr6 (29 HSPs)
chr6 (185-279)||(8805523-8805623)
chr6 (185-239)||(31579222-31579276)
chr6 (185-278)||(7938124-7938219)
chr6 (187-277)||(1700362-1700454)
chr6 (185-262)||(21924907-21924986)
chr6 (185-278)||(5732474-5732561)
chr6 (185-279)||(7086803-7086905)
chr6 (185-275)||(9025448-9025545)
chr6 (185-239)||(7265588-7265644)
chr6 (189-239)||(7377991-7378043)
chr6 (185-239)||(33001284-33001340)
chr6 (185-279)||(426477-426565)
chr6 (185-234)||(9617442-9617493)
chr6 (186-235)||(9629392-9629443)
chr6 (245-280)||(4878028-4878063)
chr6 (245-280)||(17327588-17327623)
chr6 (185-239)||(30851610-30851664)
chr6 (185-236)||(32511664-32511717)
chr6 (235-276)||(5569825-5569866)
chr6 (245-278)||(7723199-7723232)
chr6 (185-222)||(9658887-9658924)
chr6 (185-222)||(17302355-17302392)
chr6 (185-239)||(19040360-19040416)
chr6 (185-222)||(30866158-30866195)
chr6 (185-234)||(34290079-34290128)
chr6 (185-234)||(34447360-34447409)
chr6 (245-281)||(10649374-10649410)
chr6 (245-277)||(17841530-17841562)
chr6 (242-278)||(32511606-32511642)
[»] chr2 (18 HSPs)
chr2 (185-278)||(31018598-31018689)
chr2 (185-277)||(18255945-18256031)
chr2 (185-232)||(4332934-4332981)
chr2 (185-240)||(30298443-30298498)
chr2 (187-233)||(36409630-36409676)
chr2 (185-234)||(2331802-2331851)
chr2 (185-234)||(21782820-21782869)
chr2 (209-278)||(26568676-26568744)
chr2 (185-232)||(2665892-2665939)
chr2 (185-237)||(22085012-22085066)
chr2 (185-237)||(31026703-31026757)
chr2 (245-280)||(37419840-37419875)
chr2 (185-231)||(28412358-28412404)
chr2 (185-276)||(42832234-42832327)
chr2 (185-239)||(5367200-5367256)
chr2 (245-278)||(26769608-26769641)
chr2 (185-221)||(12933751-12933787)
chr2 (245-281)||(20539629-20539665)
[»] chr8 (28 HSPs)
chr8 (185-280)||(27213555-27213646)
chr8 (185-236)||(4786336-4786389)
chr8 (185-239)||(37283807-37283861)
chr8 (185-279)||(12606790-12606880)
chr8 (185-239)||(12985400-12985456)
chr8 (185-239)||(13844591-13844647)
chr8 (185-239)||(31236572-31236628)
chr8 (185-239)||(33405379-33405435)
chr8 (185-222)||(38278189-38278226)
chr8 (185-237)||(31580124-31580178)
chr8 (185-281)||(34897093-34897183)
chr8 (185-239)||(3025559-3025615)
chr8 (235-280)||(4673352-4673397)
chr8 (185-222)||(11803267-11803304)
chr8 (245-278)||(11833936-11833969)
chr8 (185-222)||(14731720-14731757)
chr8 (185-222)||(20785479-20785516)
chr8 (185-239)||(20873077-20873133)
chr8 (245-278)||(25566916-25566949)
chr8 (245-278)||(31514940-31514973)
chr8 (245-278)||(36450694-36450727)
chr8 (185-222)||(39954293-39954330)
chr8 (185-221)||(4298901-4298937)
chr8 (185-278)||(4948660-4948754)
chr8 (185-266)||(8798805-8798882)
chr8 (186-234)||(9382981-9383029)
chr8 (185-234)||(15816129-15816180)
chr8 (185-233)||(24017441-24017489)
[»] chr5 (26 HSPs)
chr5 (185-239)||(6770551-6770605)
chr5 (185-240)||(17925166-17925223)
chr5 (188-279)||(6326252-6326345)
chr5 (185-239)||(23012403-23012459)
chr5 (185-239)||(28588669-28588725)
chr5 (185-239)||(33178033-33178089)
chr5 (185-238)||(16203791-16203846)
chr5 (223-279)||(39695950-39696005)
chr5 (245-279)||(10298636-10298670)
chr5 (245-279)||(14873608-14873642)
chr5 (245-278)||(7677802-7677835)
chr5 (245-278)||(17123133-17123166)
chr5 (245-278)||(21576685-21576718)
chr5 (245-278)||(22423764-22423797)
chr5 (185-222)||(30098334-30098371)
chr5 (185-239)||(30502383-30502439)
chr5 (185-239)||(30542726-30542782)
chr5 (185-222)||(35017045-35017082)
chr5 (245-278)||(35017129-35017162)
chr5 (245-278)||(39698638-39698671)
chr5 (197-239)||(43564901-43564945)
chr5 (185-221)||(12159960-12159996)
chr5 (190-239)||(17482473-17482524)
chr5 (230-278)||(21194063-21194111)
chr5 (236-276)||(43001882-43001922)
chr5 (245-281)||(43564967-43565003)
[»] chr3 (28 HSPs)
chr3 (185-239)||(11251986-11252040)
chr3 (185-230)||(27277844-27277889)
chr3 (185-239)||(49505149-49505205)
chr3 (189-232)||(5441035-5441078)
chr3 (195-266)||(13414487-13414560)
chr3 (195-238)||(35222956-35223001)
chr3 (245-278)||(4990912-4990945)
chr3 (185-218)||(5339116-5339149)
chr3 (185-239)||(7928458-7928514)
chr3 (185-239)||(8383265-8383321)
chr3 (245-278)||(8842415-8842448)
chr3 (185-222)||(9624649-9624686)
chr3 (185-263)||(10268457-10268537)
chr3 (245-278)||(11252062-11252095)
chr3 (185-222)||(11313814-11313851)
chr3 (245-278)||(20503551-20503584)
chr3 (222-275)||(21367329-21367382)
chr3 (185-229)||(30582306-30582351)
chr3 (185-222)||(32804554-32804591)
chr3 (245-278)||(34185052-34185085)
chr3 (185-222)||(47362570-47362607)
chr3 (185-222)||(48202283-48202320)
chr3 (185-239)||(55401083-55401139)
chr3 (245-278)||(55401161-55401194)
chr3 (245-277)||(8789489-8789521)
chr3 (185-221)||(17568698-17568734)
chr3 (185-234)||(28678311-28678362)
chr3 (185-221)||(39756244-39756280)
[»] chr7 (26 HSPs)
chr7 (185-278)||(28155578-28155673)
chr7 (185-281)||(35861972-35862073)
chr7 (187-239)||(3554501-3554555)
chr7 (185-239)||(3721101-3721157)
chr7 (185-239)||(15680817-15680873)
chr7 (185-222)||(27093427-27093464)
chr7 (185-222)||(27184837-27184874)
chr7 (185-278)||(30813820-30813916)
chr7 (185-238)||(40656996-40657049)
chr7 (222-278)||(6490779-6490835)
chr7 (244-280)||(23128601-23128637)
chr7 (186-234)||(30731046-30731094)
chr7 (245-280)||(5409769-5409804)
chr7 (185-232)||(11700811-11700858)
chr7 (195-239)||(18213028-18213074)
chr7 (185-232)||(29787373-29787420)
chr7 (185-239)||(598216-598272)
chr7 (185-222)||(5956281-5956318)
chr7 (185-222)||(8160424-8160461)
chr7 (185-239)||(20549799-20549855)
chr7 (203-240)||(22200453-22200490)
chr7 (203-240)||(22237331-22237368)
chr7 (245-278)||(29763129-29763162)
chr7 (185-222)||(38143231-38143268)
chr7 (186-222)||(3938152-3938188)
chr7 (185-238)||(24146824-24146879)
[»] scaffold0004 (1 HSPs)
scaffold0004 (230-277)||(92893-92940)
[»] scaffold0019 (1 HSPs)
scaffold0019 (245-280)||(71822-71857)
[»] scaffold0475 (1 HSPs)
scaffold0475 (245-279)||(3394-3428)
[»] scaffold0110 (1 HSPs)
scaffold0110 (185-232)||(28858-28907)
[»] scaffold0793 (1 HSPs)
scaffold0793 (245-278)||(4821-4854)
[»] scaffold0316 (1 HSPs)
scaffold0316 (185-234)||(16144-16193)
[»] scaffold0027 (1 HSPs)
scaffold0027 (245-278)||(46743-46776)
[»] scaffold0236 (1 HSPs)
scaffold0236 (185-234)||(25768-25819)


Alignment Details
Target: chr1 (Bit Score: 157; Significance: 2e-83; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 185 - 353
Target Start/End: Complemental strand, 2288218 - 2288050
Alignment:
Q  185 taataatttaagaaaatcacataatttaatgtaattatgtgtcggtgtcggacacctgagcacgcctaatccgaggagtgtcggtgcttcataggtcgat 284  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||    
T  2288218 taataatttaagaaaatcacataattcaatgtaattatgtgtcggtgtcggacacctgagcacgcctaatccgaggaatgtcagtgcttcataggtcgat 2288119  T
Q  285 tattagtgcaaaatgtaagaaggatttatagaaatacgctgctgtatactagtttatatatgttcaaat 353  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2288118 tattagtgcaaaatgtaagaaggatttatagaaatacgctgctgtatactagtttatatatgttcaaat 2288050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 2288402 - 2288273
Alignment:
Q  1 tttggatatacctatgtttattgatttatgctttttgattaagcttgattatgcctatatgattgtattggcttgttgcattttttggagccactaatta 100  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2288402 tttggatatacctatgtttcttgatttatgctttttgattaagcttgattatgcctatatgattgtattggcttgttgcattttttggagccactaatta 2288303  T
Q  101 atcagtctcagtaagtcgttaccaatgaag 130  Q
    ||||||||||||||||||||||||||||||    
T  2288302 atcagtctcagtaagtcgttaccaatgaag 2288273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 185 - 276
Target Start/End: Complemental strand, 25452199 - 25452108
Alignment:
Q  185 taataatttaagaaaatcacataatttaatgtaattatgtgtcggtgtcggacacctgagcacgcctaatccgaggagtgtcggtgcttcat 276  Q
    ||||||||| |||||||| ||||||| | |||||||||||||||||||| |||||| || |||||||||| |||| |||||| |||||||||    
T  25452199 taataatttgagaaaatctcataattcagtgtaattatgtgtcggtgtcagacaccggaacacgcctaattcgagcagtgtccgtgcttcat 25452108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 25 - 71
Target Start/End: Complemental strand, 2288444 - 2288398
Alignment:
Q  25 tttatgctttttgattaagcttgattatgcctatatgattgtattgg 71  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||    
T  2288444 tttatgctttttgattaagcttgattatgcctatatgattgttttgg 2288398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 185 - 279
Target Start/End: Original strand, 13436466 - 13436563
Alignment:
Q  185 taataatttaagaaaatcacataatttaatgtaat--tatgtgtcggtgtcggacacct-gagcacgcctaatccgaggagtgtcggtgcttcatagg 279  Q
    |||||||||||| ||||||||||||| | ||||||  ||||||| |||||||||||| | || |||| |||||||||| |||||| ||||||||||||    
T  13436466 taataatttaaggaaatcacataattcagtgtaattatatgtgttggtgtcggacacgtagaacacgactaatccgagaagtgtccgtgcttcatagg 13436563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 187 - 234
Target Start/End: Complemental strand, 4849228 - 4849181
Alignment:
Q  187 ataatttaagaaaatcacataatttaatgtaattatgtgtcggtgtcg 234  Q
    ||||||||||||||| |||||||||||| |||||||||||||||||||    
T  4849228 ataatttaagaaaataacataatttaatataattatgtgtcggtgtcg 4849181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 185 - 239
Target Start/End: Complemental strand, 39953197 - 39953141
Alignment:
Q  185 taataatttaagaaaatcacataatttaatgtaat--tatgtgtcggtgtcggacac 239  Q
    ||||||||| |||||||||||||||||| ||||||  ||||||||||||||||||||    
T  39953197 taataattttagaaaatcacataatttagtgtaattgtatgtgtcggtgtcggacac 39953141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 185 - 280
Target Start/End: Complemental strand, 22881667 - 22881565
Alignment:
Q  185 taataatttaagaaaatcacataatttaatgtaatt--atgtgtcggtgtcg-----gacacctgagcacgcctaatccgaggagtgtcggtgcttcata 277  Q
    ||||||||| | |||||||||||||||| |||||||  | ||||||||||||     |||||| |  |||| ||||||||||||||||| ||||||||||    
T  22881667 taataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcggacacgacaccgggacacgtctaatccgaggagtgtccgtgcttcata 22881568  T
Q  278 ggt 280  Q
    |||    
T  22881567 ggt 22881565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 185 - 222
Target Start/End: Complemental strand, 12713378 - 12713341
Alignment:
Q  185 taataatttaagaaaatcacataatttaatgtaattat 222  Q
    |||||||||||||||||||||||||||| |||||||||    
T  12713378 taataatttaagaaaatcacataatttagtgtaattat 12713341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 185 - 222
Target Start/End: Complemental strand, 12717469 - 12717432
Alignment:
Q  185 taataatttaagaaaatcacataatttaatgtaattat 222  Q
    |||||||||||||||||||||||||||| |||||||||    
T  12717469 taataatttaagaaaatcacataatttagtgtaattat 12717432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 185 - 239
Target Start/End: Complemental strand, 14332693 - 14332637
Alignment:
Q  185 taataatttaagaaaatcacataatttaatgtaat--tatgtgtcggtgtcggacac 239  Q
    ||||||||| |||||||||||||||||| ||||||  ||||| ||||||||||||||    
T  14332693 taataatttgagaaaatcacataatttagtgtaattatatgtctcggtgtcggacac 14332637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 185 - 239
Target Start/End: Original strand, 19637776 - 19637832
Alignment:
Q  185 taataatttaagaaaatcacataatttaatgtaat--tatgtgtcggtgtcggacac 239  Q
    ||||||||||||||||| |||| ||| ||||||||  ||||||||||||||||||||    
T  19637776 taataatttaagaaaatgacattattcaatgtaatcatatgtgtcggtgtcggacac 19637832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 235 - 280
Target Start/End: Original strand, 22947806 - 22947851
Alignment:
Q  235 gacacctgagcacgcctaatccgaggagtgtcggtgcttcataggt 280  Q
    ||||||||  |||||||||||||||||||||| |||||||||||||    
T  22947806 gacacctggacacgcctaatccgaggagtgtccgtgcttcataggt 22947851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 281
Target Start/End: Complemental strand, 29144369 - 29144317
Alignment:
Q  229 gtgtcggacacctgagcacgcctaatccgaggagtgtcggtgcttcataggtc 281  Q
    ||||| |||||| || |||||||||||||| ||||||| ||||||||||||||    
T  29144369 gtgtccgacaccggaacacgcctaatccgaagagtgtccgtgcttcataggtc 29144317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 245 - 280
Target Start/End: Complemental strand, 21366025 - 21365990
Alignment:
Q  245 cacgcctaatccgaggagtgtcggtgcttcataggt 280  Q
    |||||||||||||||||||||| |||||||||||||    
T  21366025 cacgcctaatccgaggagtgtccgtgcttcataggt 21365990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 279
Target Start/End: Original strand, 37598917 - 37598951
Alignment:
Q  245 cacgcctaatccgaggagtgtcggtgcttcatagg 279  Q
    |||||||||||||||||||||| ||||||||||||    
T  37598917 cacgcctaatccgaggagtgtccgtgcttcatagg 37598951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 279
Target Start/End: Complemental strand, 41877521 - 41877431
Alignment:
Q  185 taataatttaagaaaatcacataatttaatgtaattat--gtgtcggtgtcggacacctgagcacgcctaatccgaggagtgtcggtgcttcatagg 279  Q
    ||||||||| ||||||| |||||||||| ||||||||   ||||||||||||||||| |      |||||| |||||||||| | ||||||||||||    
T  41877521 taataatttgagaaaattacataatttagtgtaattacaagtgtcggtgtcggacacgt------gcctaacccgaggagtggccgtgcttcatagg 41877431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 279
Target Start/End: Complemental strand, 46940797 - 46940747
Alignment:
Q  229 gtgtcggacacctgagcacgcctaatccgaggagtgtcggtgcttcatagg 279  Q
    ||||| |||||| || |||||||||||||||||||||  ||||||||||||    
T  46940797 gtgtccgacaccggaacacgcctaatccgaggagtgttcgtgcttcatagg 46940747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 239
Target Start/End: Complemental strand, 1864931 - 1864875
Alignment:
Q  185 taataatttaagaaaatcacataatttaatgtaat--tatgtgtcggtgtcggacac 239  Q
    ||||||||| |||||||||||||||| | ||||||  ||||||||||||| ||||||    
T  1864931 taataatttgagaaaatcacataattcagtgtaattatatgtgtcggtgttggacac 1864875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 4877745 - 4877797
Alignment:
Q  8 atacctatgtttattgatttatgctttttgattaagc--ttgattatgcctat 58  Q
    |||||||||||| ||  ||||||||||||||||||||  ||||||||||||||    
T  4877745 atacctatgtttcttcttttatgctttttgattaagcttttgattatgcctat 4877797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 222
Target Start/End: Original strand, 6427358 - 6427395
Alignment:
Q  185 taataatttaagaaaatcacataatttaatgtaattat 222  Q
    ||||||||| |||||||||||||||| |||||||||||    
T  6427358 taataatttgagaaaatcacataattcaatgtaattat 6427395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 277
Target Start/End: Original strand, 9103648 - 9103741
Alignment:
Q  185 taataatttaagaaaatcacataatttaatgtaatt-atgtgtcggtgtcggacacctgagcacgcctaatccgaggagtgtcggtgcttcata 277  Q
    ||||||||| | |||||||||||||||| | ||||  | ||||||||||||||||||  |  ||||||||||  | ||||||| ||||||||||    
T  9103648 taataatttgaaaaaatcacataatttagtttaatacaagtgtcggtgtcggacaccgaaaaacgcctaatcttaagagtgtccgtgcttcata 9103741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 239
Target Start/End: Original strand, 9709828 - 9709884
Alignment:
Q  185 taataatttaagaaaatcacataatttaatgtaat--tatgtgtcggtgtcggacac 239  Q
    ||||||||| ||||||||||||||||   ||||||  ||||||||||||||||||||    
T  9709828 taataatttgagaaaatcacataattcgttgtaattatatgtgtcggtgtcggacac 9709884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 222
Target Start/End: Complemental strand, 16164366 - 16164329
Alignment:
Q  185 taataatttaagaaaatcacataatttaatgtaattat 222  Q
    ||||||||| | ||||||||||||||||||||||||||    
T  16164366 taataatttgaaaaaatcacataatttaatgtaattat 16164329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 278
Target Start/End: Complemental strand, 22515860 - 22515827
Alignment:
Q  245 cacgcctaatccgaggagtgtcggtgcttcatag 278  Q
    |||||||||||||||||||||| |||||||||||    
T  22515860 cacgcctaatccgaggagtgtccgtgcttcatag 22515827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 239
Target Start/End: Complemental strand, 22515938 - 22515882
Alignment:
Q  185 taataatttaagaaaatcacataatttaatgtaatt--atgtgtcggtgtcggacac 239  Q
    ||||||||| | |||||||||||||||| |||||||  | |||||||||||||||||    
T  22515938 taataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcggacac 22515882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 239
Target Start/End: Complemental strand, 29163428 - 29163376
Alignment:
Q  189 aatttaagaaaatcacataatttaatgtaat--tatgtgtcggtgtcggacac 239  Q
    |||||| ||||||||||||||| ||| ||||  ||||||||||||||||||||    
T  29163428 aatttaggaaaatcacataattcaatttaattatatgtgtcggtgtcggacac 29163376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 222
Target Start/End: Complemental strand, 34257961 - 34257924
Alignment:
Q  185 taataatttaagaaaatcacataatttaatgtaattat 222  Q
    ||||||||||| |||||||||||||||| |||||||||    
T  34257961 taataatttaataaaatcacataatttagtgtaattat 34257924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 278
Target Start/End: Complemental strand, 35702575 - 35702542
Alignment:
Q  245 cacgcctaatccgaggagtgtcggtgcttcatag 278  Q
    |||||||||||||||||||||| |||||||||||    
T  35702575 cacgcctaatccgaggagtgtccgtgcttcatag 35702542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 239
Target Start/End: Original strand, 36878469 - 36878525
Alignment:
Q  185 taataatttaagaaaatcacataatttaatgtaattat--gtgtcggtgtcggacac 239  Q
    ||||||||| |||||||||||||||| | |||||||||  ||||||||||| |||||    
T  36878469 taataatttgagaaaatcacataattcagtgtaattataggtgtcggtgtctgacac 36878525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 239
Target Start/End: Complemental strand, 38078712 - 38078656
Alignment:
Q  185 taataatttaagaaaatcacataatttaatgtaatt--atgtgtcggtgtcggacac 239  Q
    ||||||||| | |||||||||||||| |||||||||  | |||||||||||||||||    
T  38078712 taataatttgaaaaaatcacataattcaatgtaattacaagtgtcggtgtcggacac 38078656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 239
Target Start/End: Complemental strand, 39130818 - 39130762
Alignment:
Q  185 taataatttaagaaaatcacataatttaatgtaattat--gtgtcggtgtcggacac 239  Q
    ||||||||| ||||||| | |||||||| |||||||||  |||||||||||||||||    
T  39130818 taataattttagaaaattatataatttagtgtaattatatgtgtcggtgtcggacac 39130762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 239
Target Start/End: Original strand, 40181879 - 40181935
Alignment:
Q  185 taataatttaagaaaatcacataatttaatgtaat--tatgtgtcggtgtcggacac 239  Q
    ||||||||| |||||||||||||||| | ||||||  ||||| ||||||||||||||    
T  40181879 taataatttgagaaaatcacataattcagtgtaattatatgtatcggtgtcggacac 40181935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 222
Target Start/End: Complemental strand, 41017455 - 41017418
Alignment:
Q  185 taataatttaagaaaatcacataatttaatgtaattat 222  Q
    ||||||||| ||||||| ||||||||||||||||||||    
T  41017455 taataatttgagaaaatgacataatttaatgtaattat 41017418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 278
Target Start/End: Original strand, 47989594 - 47989627
Alignment:
Q  245 cacgcctaatccgaggagtgtcggtgcttcatag 278  Q
    |||||||||||||||||||||| |||||||||||    
T  47989594 cacgcctaatccgaggagtgtccgtgcttcatag 47989627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 239
Target Start/End: Original strand, 52903257 - 52903313
Alignment:
Q  185 taataatttaagaaaatcacataatttaatgtaat--tatgtgtcggtgtcggacac 239  Q
    ||||||||||| ||||||| |||||| | ||||||  ||||||||||||||||||||    
T  52903257 taataatttaataaaatcatataattcagtgtaattatatgtgtcggtgtcggacac 52903313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 245 - 281
Target Start/End: Original strand, 9828141 - 9828177
Alignment:
Q  245 cacgcctaatccgaggagtgtcggtgcttcataggtc 281  Q
    |||| ||||||||||||||||| ||||||||||||||    
T  9828141 cacgtctaatccgaggagtgtccgtgcttcataggtc 9828177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 189 - 234
Target Start/End: Original strand, 25272494 - 25272541
Alignment:
Q  189 aatttaagaaaatcacataatttaatgtaattat--gtgtcggtgtcg 234  Q
    ||||| |||||||||||||||||| |||||||||  ||||||||||||    
T  25272494 aatttgagaaaatcacataatttagtgtaattataagtgtcggtgtcg 25272541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 240
Target Start/End: Original strand, 30749858 - 30749905
Alignment:
Q  195 agaaaatcacataatttaatgtaattat--gtgtcggtgtcggacacc 240  Q
    |||||||||||||||| | |||||||||  ||||||||||||||||||    
T  30749858 agaaaatcacataattcagtgtaattatatgtgtcggtgtcggacacc 30749905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 240
Target Start/End: Original strand, 30771309 - 30771356
Alignment:
Q  195 agaaaatcacataatttaatgtaattat--gtgtcggtgtcggacacc 240  Q
    |||||||||||||||| | |||||||||  ||||||||||||||||||    
T  30771309 agaaaatcacataattcagtgtaattatatgtgtcggtgtcggacacc 30771356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 235 - 279
Target Start/End: Complemental strand, 31694682 - 31694638
Alignment:
Q  235 gacacctgagcacgcctaatccgaggagtgtcggtgcttcatagg 279  Q
    |||||| || ||||||||||| |||||||||| ||||||||||||    
T  31694682 gacaccggaacacgcctaatctgaggagtgtccgtgcttcatagg 31694638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 185 - 221
Target Start/End: Complemental strand, 32461514 - 32461478
Alignment:
Q  185 taataatttaagaaaatcacataatttaatgtaatta 221  Q
    ||||||||| | |||||||||||||||||||||||||    
T  32461514 taataatttgaaaaaatcacataatttaatgtaatta 32461478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 245 - 281
Target Start/End: Original strand, 40917846 - 40917882
Alignment:
Q  245 cacgcctaatccgaggagtgtcggtgcttcataggtc 281  Q
    ||||||||||||||||| |||| ||||||||||||||    
T  40917846 cacgcctaatccgaggactgtccgtgcttcataggtc 40917882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 49; Significance: 6e-19; HSPs: 29)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 185 - 277
Target Start/End: Complemental strand, 17425440 - 17425348
Alignment:
Q  185 taataatttaagaaaatcacataatttaatgtaattatgtgtcggtgtcggacacctgagcacgcctaatccgaggagtgtcggtgcttcata 277  Q
    ||||||||| |||||||| ||||||| | |||||||||||||| ||||| |||||  |  |||||||||||||||||||||| ||||||||||    
T  17425440 taataatttgagaaaatcgcataattcagtgtaattatgtgtctgtgtcagacacaaggacacgcctaatccgaggagtgtctgtgcttcata 17425348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 33950144 - 33950201
Alignment:
Q  185 taataatttaagaaaatcacataatttaatgtaat--tatgtgtcggtgtcggacacc 240  Q
    ||||||||| |||||||||||||||||||||||||  |||||||||||||| ||||||    
T  33950144 taataatttgagaaaatcacataatttaatgtaatcatatgtgtcggtgtcagacacc 33950201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 187 - 234
Target Start/End: Original strand, 2234260 - 2234307
Alignment:
Q  187 ataatttaagaaaatcacataatttaatgtaattatgtgtcggtgtcg 234  Q
    ||||||| |||||||||||||||| |||||||||||||||| ||||||    
T  2234260 ataatttgagaaaatcacataattcaatgtaattatgtgtcagtgtcg 2234307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 185 - 222
Target Start/End: Complemental strand, 7214573 - 7214536
Alignment:
Q  185 taataatttaagaaaatcacataatttaatgtaattat 222  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  7214573 taataatttgagaaaatcacataatttaatgtaattat 7214536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 190 - 222
Target Start/End: Original strand, 17344513 - 17344545
Alignment:
Q  190 atttaagaaaatcacataatttaatgtaattat 222  Q
    |||||||||||||||||||||||||||||||||    
T  17344513 atttaagaaaatcacataatttaatgtaattat 17344545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 223 - 279
Target Start/End: Original strand, 30094077 - 30094133
Alignment:
Q  223 gtgtcggtgtcggacacctgagcacgcctaatccgaggagtgtcggtgcttcatagg 279  Q
    |||||||||||||||||| |  |||||||||||||| ||||||| ||||| ||||||    
T  30094077 gtgtcggtgtcggacaccgggacacgcctaatccgaagagtgtccgtgctacatagg 30094133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 245 - 280
Target Start/End: Complemental strand, 3064901 - 3064866
Alignment:
Q  245 cacgcctaatccgaggagtgtcggtgcttcataggt 280  Q
    |||||||||||||||||||||| |||||||||||||    
T  3064901 cacgcctaatccgaggagtgtccgtgcttcataggt 3064866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 187 - 222
Target Start/End: Original strand, 13134460 - 13134495
Alignment:
Q  187 ataatttaagaaaatcacataatttaatgtaattat 222  Q
    |||||||||||||||||||||||||| |||||||||    
T  13134460 ataatttaagaaaatcacataatttagtgtaattat 13134495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 279
Target Start/End: Complemental strand, 5775337 - 5775303
Alignment:
Q  245 cacgcctaatccgaggagtgtcggtgcttcatagg 279  Q
    |||||||||||||||||||||| ||||||||||||    
T  5775337 cacgcctaatccgaggagtgtccgtgcttcatagg 5775303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 219
Target Start/End: Original strand, 17446079 - 17446113
Alignment:
Q  185 taataatttaagaaaatcacataatttaatgtaat 219  Q
    |||||||||||||||||||||||||||| ||||||    
T  17446079 taataatttaagaaaatcacataatttagtgtaat 17446113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 278
Target Start/End: Complemental strand, 715578 - 715545
Alignment:
Q  245 cacgcctaatccgaggagtgtcggtgcttcatag 278  Q
    |||||||||||||||||||||| |||||||||||    
T  715578 cacgcctaatccgaggagtgtccgtgcttcatag 715545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 278
Target Start/End: Complemental strand, 752904 - 752871
Alignment:
Q  245 cacgcctaatccgaggagtgtcggtgcttcatag 278  Q
    |||||||||||||||||||||| |||||||||||    
T  752904 cacgcctaatccgaggagtgtccgtgcttcatag 752871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 239
Target Start/End: Complemental strand, 8423769 - 8423713
Alignment:
Q  185 taataatttaagaaaatcacataatttaatgtaattat--gtgtcggtgtcggacac 239  Q
    ||||||||| |||||||||||||||| | |||||||||   ||||||||||||||||    
T  8423769 taataatttgagaaaatcacataattcagtgtaattataaatgtcggtgtcggacac 8423713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 239
Target Start/End: Complemental strand, 12895325 - 12895269
Alignment:
Q  185 taataatttaagaaaatcacataatttaatgtaattat--gtgtcggtgtcggacac 239  Q
    ||||||||| | |||||||||||||||  |||||||||  |||||||||||||||||    
T  12895325 taataatttgaaaaaatcacataattttgtgtaattataagtgtcggtgtcggacac 12895269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 222
Target Start/End: Complemental strand, 18491930 - 18491893
Alignment:
Q  185 taataatttaagaaaatcacataatttaatgtaattat 222  Q
    ||||||||||| ||||||| ||||||||||||||||||    
T  18491930 taataatttaaaaaaatcatataatttaatgtaattat 18491893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 280
Target Start/End: Original strand, 20633535 - 20633592
Alignment:
Q  223 gtgtcggtgtcggacacctgagcacgcctaatccgaggagtgtcggtgcttcataggt 280  Q
    ||||||||||||||||||    |||||||||||| ||||||||  |||||||||||||    
T  20633535 gtgtcggtgtcggacaccaagacacgcctaatccaaggagtgttcgtgcttcataggt 20633592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 222
Target Start/End: Complemental strand, 21539918 - 21539881
Alignment:
Q  185 taataatttaagaaaatcacataatttaatgtaattat 222  Q
    ||||||||||||||||||| |||||||| |||||||||    
T  21539918 taataatttaagaaaatcatataatttagtgtaattat 21539881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 278
Target Start/End: Complemental strand, 23292959 - 23292926
Alignment:
Q  245 cacgcctaatccgaggagtgtcggtgcttcatag 278  Q
    |||||||||||||||||||||| |||||||||||    
T  23292959 cacgcctaatccgaggagtgtccgtgcttcatag 23292926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 239
Target Start/End: Complemental strand, 54580074 - 54580018
Alignment:
Q  185 taataatttaagaaaatcacataatttaatgtaattat--gtgtcggtgtcggacac 239  Q
    ||||||||| | |||||||||||||| | |||||||||  |||||||||||||||||    
T  54580074 taataatttgaaaaaatcacataattcagtgtaattataagtgtcggtgtcggacac 54580018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 234
Target Start/End: Original strand, 56257941 - 56257990
Alignment:
Q  185 taataatttaagaaaatcacataatttaatgtaattatgtgtcggtgtcg 234  Q
    ||||||||| ||||||||| |||||| | |||||||||||||| ||||||    
T  56257941 taataatttgagaaaatcatataattcagtgtaattatgtgtctgtgtcg 56257990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 245 - 277
Target Start/End: Original strand, 4383452 - 4383484
Alignment:
Q  245 cacgcctaatccgaggagtgtcggtgcttcata 277  Q
    |||||||||||||||||||||| ||||||||||    
T  4383452 cacgcctaatccgaggagtgtccgtgcttcata 4383484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 245 - 281
Target Start/End: Complemental strand, 11596330 - 11596294
Alignment:
Q  245 cacgcctaatccgaggagtgtcggtgcttcataggtc 281  Q
    ||||||||||| |||||||||| ||||||||||||||    
T  11596330 cacgcctaatctgaggagtgtccgtgcttcataggtc 11596294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 230 - 278
Target Start/End: Original strand, 12708213 - 12708261
Alignment:
Q  230 tgtcggacacctgagcacgcctaatccgaggagtgtcggtgcttcatag 278  Q
    ||||||||| | || |||||||||||||||||| ||| |||||||||||    
T  12708213 tgtcggacatcggaacacgcctaatccgaggagcgtccgtgcttcatag 12708261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 187 - 227
Target Start/End: Complemental strand, 26276058 - 26276018
Alignment:
Q  187 ataatttaagaaaatcacataatttaatgtaattatgtgtc 227  Q
    ||||||| ||||||| |||||||| ||||||||||||||||    
T  26276058 ataatttgagaaaatgacataattcaatgtaattatgtgtc 26276018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 185 - 221
Target Start/End: Complemental strand, 27706228 - 27706192
Alignment:
Q  185 taataatttaagaaaatcacataatttaatgtaatta 221  Q
    ||||||||||| |||||||||||||||| ||||||||    
T  27706228 taataatttaaaaaaatcacataatttagtgtaatta 27706192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 185 - 237
Target Start/End: Complemental strand, 32510825 - 32510773
Alignment:
Q  185 taataatttaagaaaatcacataatttaatgtaattatgtgtcggtgtcggac 237  Q
    |||||||||||||||||  ||||  | ||||||||||||||||||| ||||||    
T  32510825 taataatttaagaaaattgcatatatcaatgtaattatgtgtcggtctcggac 32510773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 245 - 277
Target Start/End: Original strand, 40965357 - 40965389
Alignment:
Q  245 cacgcctaatccgaggagtgtcggtgcttcata 277  Q
    ||||||||||| |||||||||||||||||||||    
T  40965357 cacgcctaatctgaggagtgtcggtgcttcata 40965389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 185 - 221
Target Start/End: Original strand, 41989572 - 41989608
Alignment:
Q  185 taataatttaagaaaatcacataatttaatgtaatta 221  Q
    ||||||||||||||||| |||||||| ||||||||||    
T  41989572 taataatttaagaaaatgacataattgaatgtaatta 41989608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 185 - 221
Target Start/End: Original strand, 43506176 - 43506212
Alignment:
Q  185 taataatttaagaaaatcacataatttaatgtaatta 221  Q
    ||||||||||||||||| ||||||||||| |||||||    
T  43506176 taataatttaagaaaattacataatttaaagtaatta 43506212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 45; Significance: 1e-16; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 185 - 279
Target Start/End: Complemental strand, 8805623 - 8805523
Alignment:
Q  185 taataatttaagaaaatcacataatttaatgtaattatgtgtcg-----gtgtcggacacctgag-cacgcctaatccgaggagtgtcggtgcttcatag 278  Q
    ||||||||| |||||||||||||||||| |||||||||||||||     ||||| ||||| || | || ||||||||||||||||||| |||||||||||    
T  8805623 taataatttgagaaaatcacataatttagtgtaattatgtgtcggtgtagtgtcagacacgtgggacatgcctaatccgaggagtgtccgtgcttcatag 8805524  T
Q  279 g 279  Q
    |    
T  8805523 g 8805523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 185 - 239
Target Start/End: Complemental strand, 31579276 - 31579222
Alignment:
Q  185 taataatttaagaaaatcacataatttaatgtaattatgtgtcggtgtcggacac 239  Q
    ||||||||| |||||||||||||||| | ||||||||||||||||||||||||||    
T  31579276 taataatttgagaaaatcacataattcagtgtaattatgtgtcggtgtcggacac 31579222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 185 - 278
Target Start/End: Original strand, 7938124 - 7938219
Alignment:
Q  185 taataatttaagaaaatcacataatttaatgtaattat--gtgtcggtgtcggacacctgag-cacgcctaatccgaggagtgtcggtgcttcatag 278  Q
    ||||||||| | ||||||| |||||||| |||||||||  ||||||||||| |||||| ||| ||||||| |||||||||||||| |||||||||||    
T  7938124 taataatttgaaaaaatcatataatttagtgtaattataagtgtcggtgtccgacacc-gagacacgcctgatccgaggagtgtccgtgcttcatag 7938219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 187 - 277
Target Start/End: Original strand, 1700362 - 1700454
Alignment:
Q  187 ataatttaagaaaatcacataatttaatgtaattat--gtgtcggtgtcggacacctgagcacgcctaatccgaggagtgtcggtgcttcata 277  Q
    ||||||||| ||||||||||| || | |||||||||  |||||||||||||||||| ||  ||||||||| | ||||||||| ||| ||||||    
T  1700362 ataatttaaaaaaatcacatatttcagtgtaattataagtgtcggtgtcggacaccagaatacgcctaattcaaggagtgtccgtgtttcata 1700454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 185 - 262
Target Start/End: Complemental strand, 21924986 - 21924907
Alignment:
Q  185 taataatttaagaaaatcacataatttaatgtaattat--gtgtcggtgtcggacacctgagcacgcctaatccgaggag 262  Q
    ||||||||| |||| |||| |||||| | |||||||||  |||||||||||||||||| |  ||||||||||||||||||    
T  21924986 taataatttgagaatatcaaataattcagtgtaattatatgtgtcggtgtcggacaccgggacacgcctaatccgaggag 21924907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 185 - 278
Target Start/End: Complemental strand, 5732561 - 5732474
Alignment:
Q  185 taataatttaagaaaatcacataatttaatgtaat--tatgtgtcggtgtcggacacctgagcacgcctaatccgaggagtgtcggtgcttcatag 278  Q
    ||||||||| ||||||||||||| |||| ||||||  |||||||||||||||||        ||||||||||||||||||||||  ||||||||||    
T  5732561 taataatttgagaaaatcacatattttagtgtaattatatgtgtcggtgtcgga--------cacgcctaatccgaggagtgtccatgcttcatag 5732474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 185 - 279
Target Start/End: Original strand, 7086803 - 7086905
Alignment:
Q  185 taataatttaagaaaatcacataatttaatgtaattat--gtgtcggtgtcg-----gacacctgag-cacgcctaatccgaggagtgtcggtgcttcat 276  Q
    ||||||||| |||||||||||||||||| |||||||||  |||||||||| |     ||||| |||| || |||||||||||||||| || |||||||||    
T  7086803 taataatttgagaaaatcacataatttagtgtaattatatgtgtcggtgtagtgtcagacacgtgagacatgcctaatccgaggagtttccgtgcttcat 7086902  T
Q  277 agg 279  Q
    |||    
T  7086903 agg 7086905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 275
Target Start/End: Complemental strand, 9025545 - 9025448
Alignment:
Q  185 taataatttaagaaaatcacataatttaatgtaattat--gtgtcggtgtcg-----gacacctgagcacgcctaatccgaggagtgtcggtgcttca 275  Q
    ||||||||| |||||||||||||||| | |||||||||  ||||||||||||     |||||| |  ||||||||||||||| |||||| ||||||||    
T  9025545 taataatttgagaaaatcacataattcagtgtaattatatgtgtcggtgtcgtgtccgacaccgggacacgcctaatccgagaagtgtccgtgcttca 9025448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 185 - 239
Target Start/End: Complemental strand, 7265644 - 7265588
Alignment:
Q  185 taataatttaagaaaatcacataatttaatgtaat--tatgtgtcggtgtcggacac 239  Q
    ||||||||| |||||||||||||||| | ||||||  ||||||||||||||||||||    
T  7265644 taataatttgagaaaatcacataattcagtgtaattatatgtgtcggtgtcggacac 7265588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 189 - 239
Target Start/End: Original strand, 7377991 - 7378043
Alignment:
Q  189 aatttaagaaaatcacataatttaatgtaat--tatgtgtcggtgtcggacac 239  Q
    ||||| |||||||||||||||| ||||||||  ||||||||||||||||||||    
T  7377991 aatttgagaaaatcacataattcaatgtaattatatgtgtcggtgtcggacac 7378043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 185 - 239
Target Start/End: Complemental strand, 33001340 - 33001284
Alignment:
Q  185 taataatttaagaaaatcacataatttaatgtaat--tatgtgtcggtgtcggacac 239  Q
    ||||||||| | |||||||||||||| ||||||||  ||||||||||||||||||||    
T  33001340 taataatttgaaaaaatcacataattaaatgtaattatatgtgtcggtgtcggacac 33001284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 279
Target Start/End: Complemental strand, 426565 - 426477
Alignment:
Q  185 taataatttaagaaaatcacataatttaatgtaatt--atgtgtcggtgtcggacacctgagcacgcctaatccgaggagtgtcggtgcttcatagg 279  Q
    ||||||||| | |||||||||||||| |||||||||  | ||||||||||||||        ||||||||||| |||||||||| ||||||||||||    
T  426565 taataatttgaaaaaatcacataattaaatgtaattacaagtgtcggtgtcgga--------cacgcctaatctgaggagtgtccgtgcttcatagg 426477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 234
Target Start/End: Original strand, 9617442 - 9617493
Alignment:
Q  185 taataatttaagaaaatcacataatttaatgtaat--tatgtgtcggtgtcg 234  Q
    ||||||||| |||||||||||||||| ||||||||  |||||||||||||||    
T  9617442 taataatttgagaaaatcacataattcaatgtaattatatgtgtcggtgtcg 9617493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 9629392 - 9629443
Alignment:
Q  186 aataatttaagaaaatcacataatttaatgtaat--tatgtgtcggtgtcgg 235  Q
    |||||||| |||||||||||||||| ||||||||  ||||||||||||||||    
T  9629392 aataatttgagaaaatcacataattcaatgtaattatatgtgtcggtgtcgg 9629443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 245 - 280
Target Start/End: Original strand, 4878028 - 4878063
Alignment:
Q  245 cacgcctaatccgaggagtgtcggtgcttcataggt 280  Q
    |||||||||||||||||||||| |||||||||||||    
T  4878028 cacgcctaatccgaggagtgtccgtgcttcataggt 4878063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 245 - 280
Target Start/End: Complemental strand, 17327623 - 17327588
Alignment:
Q  245 cacgcctaatccgaggagtgtcggtgcttcataggt 280  Q
    |||||||||||||||||||||| |||||||||||||    
T  17327623 cacgcctaatccgaggagtgtccgtgcttcataggt 17327588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 239
Target Start/End: Original strand, 30851610 - 30851664
Alignment:
Q  185 taataatttaagaaaatcacataatttaatgtaat--tatgtgtcggtgtcggacac 239  Q
    ||||||||||||||||||||  |||| ||||||||  ||||||||||||||||||||    
T  30851610 taataatttaagaaaatcac--aattcaatgtaattatatgtgtcggtgtcggacac 30851664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 236
Target Start/End: Complemental strand, 32511717 - 32511664
Alignment:
Q  185 taataatttaagaaaatcacataatttaatgtaattat--gtgtcggtgtcgga 236  Q
    |||||||||||||||||||||||||| | |||||||||  |||| |||||||||    
T  32511717 taataatttaagaaaatcacataattcagtgtaattataagtgttggtgtcgga 32511664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 276
Target Start/End: Original strand, 5569825 - 5569866
Alignment:
Q  235 gacacctgagcacgcctaatccgaggagtgtcggtgcttcat 276  Q
    ||||||||| ||||||||||| |||||||||| |||||||||    
T  5569825 gacacctgaacacgcctaatctgaggagtgtccgtgcttcat 5569866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 278
Target Start/End: Complemental strand, 7723232 - 7723199
Alignment:
Q  245 cacgcctaatccgaggagtgtcggtgcttcatag 278  Q
    |||||||||||||||||||||| |||||||||||    
T  7723232 cacgcctaatccgaggagtgtccgtgcttcatag 7723199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 222
Target Start/End: Original strand, 9658887 - 9658924
Alignment:
Q  185 taataatttaagaaaatcacataatttaatgtaattat 222  Q
    |||||||||||||||||||||||||| | |||||||||    
T  9658887 taataatttaagaaaatcacataattcagtgtaattat 9658924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 222
Target Start/End: Original strand, 17302355 - 17302392
Alignment:
Q  185 taataatttaagaaaatcacataatttaatgtaattat 222  Q
    |||||||||||||||||||||||||||  |||||||||    
T  17302355 taataatttaagaaaatcacataattttgtgtaattat 17302392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 239
Target Start/End: Original strand, 19040360 - 19040416
Alignment:
Q  185 taataatttaagaaaatcacataatttaatgtaat--tatgtgtcggtgtcggacac 239  Q
    ||||||||| |||||||||||||||| | ||||||  |||||||| |||||||||||    
T  19040360 taataatttgagaaaatcacataattcagtgtaattatatgtgtctgtgtcggacac 19040416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 222
Target Start/End: Complemental strand, 30866195 - 30866158
Alignment:
Q  185 taataatttaagaaaatcacataatttaatgtaattat 222  Q
    ||||||||| |||||||||||||||| |||||||||||    
T  30866195 taataatttgagaaaatcacataattcaatgtaattat 30866158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 234
Target Start/End: Complemental strand, 34290128 - 34290079
Alignment:
Q  185 taataatttaagaaaatcacataatttaatgtaattatgtgtcggtgtcg 234  Q
    |||||||||  || |||||||||||| | |||||||||||||||||||||    
T  34290128 taataatttgcgagaatcacataattcagtgtaattatgtgtcggtgtcg 34290079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 234
Target Start/End: Complemental strand, 34447409 - 34447360
Alignment:
Q  185 taataatttaagaaaatcacataatttaatgtaattatgtgtcggtgtcg 234  Q
    ||||||||| | ||||||| |||||||| ||||||| |||||||||||||    
T  34447409 taataatttgataaaatcatataatttagtgtaattttgtgtcggtgtcg 34447360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 245 - 281
Target Start/End: Original strand, 10649374 - 10649410
Alignment:
Q  245 cacgcctaatccgaggagtgtcggtgcttcataggtc 281  Q
    |||||||||||| ||||||||| ||||||||||||||    
T  10649374 cacgcctaatccaaggagtgtccgtgcttcataggtc 10649410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 245 - 277
Target Start/End: Complemental strand, 17841562 - 17841530
Alignment:
Q  245 cacgcctaatccgaggagtgtcggtgcttcata 277  Q
    |||||||||||||||||||||| ||||||||||    
T  17841562 cacgcctaatccgaggagtgtccgtgcttcata 17841530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 242 - 278
Target Start/End: Complemental strand, 32511642 - 32511606
Alignment:
Q  242 gagcacgcctaatccgaggagtgtcggtgcttcatag 278  Q
    |||||||||||||| |||||||||| |||||||||||    
T  32511642 gagcacgcctaatcggaggagtgtccgtgcttcatag 32511606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 44; Significance: 6e-16; HSPs: 18)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 185 - 278
Target Start/End: Original strand, 31018598 - 31018689
Alignment:
Q  185 taataatttaagaaaatcacataatttaatgtaattat--gtgtcggtgtcggacacctgagcacgcctaatccgaggagtgtcggtgcttcatag 278  Q
    ||||||||| |||||||||||| ||||| |||||||||  ||||||||||||||||| ||    || ||||||||||||||||| |||||||||||    
T  31018598 taataatttcagaaaatcacatgatttagtgtaattataggtgtcggtgtcggacacgtg----cgtctaatccgaggagtgtcagtgcttcatag 31018689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 185 - 277
Target Start/End: Complemental strand, 18256031 - 18255945
Alignment:
Q  185 taataatttaagaaaatcacataatttaatgtaatt--atgtgtcggtgtcggacacctgagcacgcctaatccgaggagtgtcggtgcttcata 277  Q
    ||||||||||| ||||||||||||||||||||||||  | ||||||||||||||        |||||||||||| ||||||||| ||||||||||    
T  18256031 taataatttaaaaaaatcacataatttaatgtaattagaagtgtcggtgtcgga--------cacgcctaatccaaggagtgtccgtgcttcata 18255945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 185 - 232
Target Start/End: Original strand, 4332934 - 4332981
Alignment:
Q  185 taataatttaagaaaatcacataatttaatgtaattatgtgtcggtgt 232  Q
    |||||||||  ||||||||||||||| |||||||||||||||||||||    
T  4332934 taataatttgggaaaatcacataattcaatgtaattatgtgtcggtgt 4332981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 30298498 - 30298443
Alignment:
Q  185 taataatttaagaaaatcacataatttaatgtaattatgtgtcggtgtcggacacc 240  Q
    ||||||||||| ||||| |||||||| | |||||| ||||||||||||||||||||    
T  30298498 taataatttaataaaatgacataattcagtgtaatcatgtgtcggtgtcggacacc 30298443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 187 - 233
Target Start/End: Complemental strand, 36409676 - 36409630
Alignment:
Q  187 ataatttaagaaaatcacataatttaatgtaattatgtgtcggtgtc 233  Q
    ||||||| | |||||||||||||||| ||||||||||||||||||||    
T  36409676 ataatttgaaaaaatcacataatttagtgtaattatgtgtcggtgtc 36409630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 185 - 234
Target Start/End: Original strand, 2331802 - 2331851
Alignment:
Q  185 taataatttaagaaaatcacataatttaatgtaattatgtgtcggtgtcg 234  Q
    ||||||||| |||||||||||||||| | |||| ||||||||||||||||    
T  2331802 taataatttgagaaaatcacataattcagtgtatttatgtgtcggtgtcg 2331851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 185 - 234
Target Start/End: Complemental strand, 21782869 - 21782820
Alignment:
Q  185 taataatttaagaaaatcacataatttaatgtaattatgtgtcggtgtcg 234  Q
    ||||||||| |||||||||||||||| | |||||||||||| ||||||||    
T  21782869 taataatttgagaaaatcacataattcagtgtaattatgtgccggtgtcg 21782820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 209 - 278
Target Start/End: Complemental strand, 26568744 - 26568676
Alignment:
Q  209 tttaatgtaattatgtgtcggtgtcggacacctgagcacgcctaatccgaggagtgtcggtgcttcatag 278  Q
    |||||||||||||||||||||||||||| || | | ||||||||||| ||| |||||| ||||| |||||    
T  26568744 tttaatgtaattatgtgtcggtgtcggatacgt-atcacgcctaatctgagaagtgtccgtgctacatag 26568676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 185 - 232
Target Start/End: Complemental strand, 2665939 - 2665892
Alignment:
Q  185 taataatttaagaaaatcacataatttaatgtaattatgtgtcggtgt 232  Q
    ||||||||| |||||||||||||||||| ||||||||| ||| |||||    
T  2665939 taataattttagaaaatcacataatttagtgtaattatatgtgggtgt 2665892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 185 - 237
Target Start/End: Original strand, 22085012 - 22085066
Alignment:
Q  185 taataatttaagaaaatcacataatttaatgtaat--tatgtgtcggtgtcggac 237  Q
    ||||||||||||||||| |||||||||| ||||||  | ||||||||||||||||    
T  22085012 taataatttaagaaaatgacataatttagtgtaatcatttgtgtcggtgtcggac 22085066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 185 - 237
Target Start/End: Original strand, 31026703 - 31026757
Alignment:
Q  185 taataatttaagaaaatcacataatttaatgtaat--tatgtgtcggtgtcggac 237  Q
    ||||||||||||||||| |||||||| ||||||||  ||| ||||||||||||||    
T  31026703 taataatttaagaaaatgacataattcaatgtaatcatatatgtcggtgtcggac 31026757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 245 - 280
Target Start/End: Original strand, 37419840 - 37419875
Alignment:
Q  245 cacgcctaatccgaggagtgtcggtgcttcataggt 280  Q
    |||||||||||||||||||||| |||||||||||||    
T  37419840 cacgcctaatccgaggagtgtccgtgcttcataggt 37419875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 231
Target Start/End: Original strand, 28412358 - 28412404
Alignment:
Q  185 taataatttaagaaaatcacataatttaatgtaattatgtgtcggtg 231  Q
    ||||||||| | |||||||||||||| | ||||||||||||||||||    
T  28412358 taataatttgataaaatcacataattcagtgtaattatgtgtcggtg 28412404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 276
Target Start/End: Complemental strand, 42832327 - 42832234
Alignment:
Q  185 taataatttaagaaaatcacataatttaatgtaattat--gtgtcggtgtcggacacctgagcacgcctaatccgaggagtgtcggtgcttcat 276  Q
    ||||||||| ||||||| ||||| || | |||||||||  ||||||||||| ||| || |  |||||||||||| |||||||||  ||||||||    
T  42832327 taataatttgagaaaattacatatttcagtgtaattataagtgtcggtgtccgactccgggacacgcctaatccaaggagtgtccttgcttcat 42832234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 239
Target Start/End: Original strand, 5367200 - 5367256
Alignment:
Q  185 taataatttaagaaaatcacataatttaatgtaat--tatgtgtcggtgtcggacac 239  Q
    ||||||||| || ||||||||||||| | ||||||  ||||||||||||||||||||    
T  5367200 taataatttgaggaaatcacataattcagtgtaattatatgtgtcggtgtcggacac 5367256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 278
Target Start/End: Original strand, 26769608 - 26769641
Alignment:
Q  245 cacgcctaatccgaggagtgtcggtgcttcatag 278  Q
    |||||||||||||||||||||| |||||||||||    
T  26769608 cacgcctaatccgaggagtgtccgtgcttcatag 26769641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 185 - 221
Target Start/End: Complemental strand, 12933787 - 12933751
Alignment:
Q  185 taataatttaagaaaatcacataatttaatgtaatta 221  Q
    ||||||||||||||||| |||||||| ||||||||||    
T  12933787 taataatttaagaaaatgacataattcaatgtaatta 12933751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 245 - 281
Target Start/End: Complemental strand, 20539665 - 20539629
Alignment:
Q  245 cacgcctaatccgaggagtgtcggtgcttcataggtc 281  Q
    ||||||| |||||||||||||| ||||||||||||||    
T  20539665 cacgcctgatccgaggagtgtccgtgcttcataggtc 20539629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 185 - 280
Target Start/End: Original strand, 27213555 - 27213646
Alignment:
Q  185 taataatttaagaaaatcacataatttaatgtaattatgtgtcggtgtcggacacctgagcacgcctaatccgaggagtgtcggtgcttcataggt 280  Q
    ||||||||| |||||||||||||||| | ||||||||| |||    |||||||||| |  |||| |||||||||| |||||| |||||||||||||    
T  27213555 taataatttcagaaaatcacataattcactgtaattatatgt----gtcggacaccgggacacggctaatccgagaagtgtccgtgcttcataggt 27213646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 236
Target Start/End: Complemental strand, 4786389 - 4786336
Alignment:
Q  185 taataatttaagaaaatcacataatttaatgtaat--tatgtgtcggtgtcgga 236  Q
    |||||||||||||||||||||||||| | ||||||  |||||||||||||||||    
T  4786389 taataatttaagaaaatcacataattcagtgtaattatatgtgtcggtgtcgga 4786336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 239
Target Start/End: Complemental strand, 37283861 - 37283807
Alignment:
Q  185 taataatttaagaaaatcacataatttaatgtaattatgtgtcggtgtcggacac 239  Q
    ||||||| | |||||||||||||||| | ||||||||||||||||||| ||||||    
T  37283861 taataatctgagaaaatcacataattcagtgtaattatgtgtcggtgtgggacac 37283807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 185 - 279
Target Start/End: Complemental strand, 12606880 - 12606790
Alignment:
Q  185 taataatttaagaaaatcacataatttaatgtaat--tatgtgtcggtgtcggacacctgagcacgcctaatccgaggagtgtcggtgcttcatagg 279  Q
    ||||||||| ||||||||| |||||| ||||||||  |||||||||||||| ||||    ||  ||||| |||||||||||||| ||||||||||||    
T  12606880 taataatttgagaaaatcatataattcaatgtaattatatgtgtcggtgtcagaca----ag--cgcctgatccgaggagtgtccgtgcttcatagg 12606790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 185 - 239
Target Start/End: Original strand, 12985400 - 12985456
Alignment:
Q  185 taataatttaagaaaatcacataatttaatgtaat--tatgtgtcggtgtcggacac 239  Q
    ||||||||| |||||||||||||||| ||||||||  ||| ||||||||||||||||    
T  12985400 taataatttgagaaaatcacataattcaatgtaatcatatatgtcggtgtcggacac 12985456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 185 - 239
Target Start/End: Complemental strand, 13844647 - 13844591
Alignment:
Q  185 taataatttaagaaaatcacataatttaatgtaat--tatgtgtcggtgtcggacac 239  Q
    ||||||||| |||||||||||||||| | ||||||  ||||||||||||||||||||    
T  13844647 taataatttgagaaaatcacataattgagtgtaattatatgtgtcggtgtcggacac 13844591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 185 - 239
Target Start/End: Complemental strand, 31236628 - 31236572
Alignment:
Q  185 taataatttaagaaaatcacataatttaatgtaat--tatgtgtcggtgtcggacac 239  Q
    ||||||||| |||||||||||||||| ||||||||  |||||||||||| |||||||    
T  31236628 taataatttgagaaaatcacataattcaatgtaattatatgtgtcggtgacggacac 31236572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 185 - 239
Target Start/End: Complemental strand, 33405435 - 33405379
Alignment:
Q  185 taataatttaagaaaatcacataatttaatgtaat--tatgtgtcggtgtcggacac 239  Q
    ||||||||| |||||| ||||||||||| ||||||  ||||||||||||||||||||    
T  33405435 taataatttgagaaaaacacataatttagtgtaattatatgtgtcggtgtcggacac 33405379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 185 - 222
Target Start/End: Complemental strand, 38278226 - 38278189
Alignment:
Q  185 taataatttaagaaaatcacataatttaatgtaattat 222  Q
    |||||||||||||||||||||||||||||| |||||||    
T  38278226 taataatttaagaaaatcacataatttaatataattat 38278189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 185 - 237
Target Start/End: Complemental strand, 31580178 - 31580124
Alignment:
Q  185 taataatttaagaaaatcacataatttaatgtaattat--gtgtcggtgtcggac 237  Q
    |||||||||||||||||||||||||| | |||||||||  |||||| ||||||||    
T  31580178 taataatttaagaaaatcacataattgagtgtaattataggtgtcgatgtcggac 31580124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 281
Target Start/End: Original strand, 34897093 - 34897183
Alignment:
Q  185 taataatttaagaaaatcacataatttaatgtaat--tatgtgtcggtgtcggacacctgagcacgcctaatccgaggagtgtcggtgcttcataggtc 281  Q
    ||||||||| |||||||||||||||| | ||||||  ||||||||| |||||||||| ||        |||| ||||||||||| ||||||||||||||    
T  34897093 taataatttgagaaaatcacataattcagtgtaattatatgtgtcgatgtcggacacatg--------taattcgaggagtgtccgtgcttcataggtc 34897183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 239
Target Start/End: Original strand, 3025559 - 3025615
Alignment:
Q  185 taataatttaagaaaatcacataatttaatgtaattat--gtgtcggtgtcggacac 239  Q
    ||||||||| |||||||||||||||| | |||||||||  ||||| |||||||||||    
T  3025559 taataatttgagaaaatcacataattcagtgtaattataggtgtcagtgtcggacac 3025615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 280
Target Start/End: Complemental strand, 4673397 - 4673352
Alignment:
Q  235 gacacctgagcacgcctaatccgaggagtgtcggtgcttcataggt 280  Q
    |||||| || |||||||||||| ||||||||| |||||||||||||    
T  4673397 gacaccggaacacgcctaatccaaggagtgtctgtgcttcataggt 4673352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 222
Target Start/End: Original strand, 11803267 - 11803304
Alignment:
Q  185 taataatttaagaaaatcacataatttaatgtaattat 222  Q
    |||||||||||||||||||||||||| | |||||||||    
T  11803267 taataatttaagaaaatcacataattcagtgtaattat 11803304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 278
Target Start/End: Original strand, 11833936 - 11833969
Alignment:
Q  245 cacgcctaatccgaggagtgtcggtgcttcatag 278  Q
    |||||||||||||||||||||| |||||||||||    
T  11833936 cacgcctaatccgaggagtgtctgtgcttcatag 11833969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 222
Target Start/End: Original strand, 14731720 - 14731757
Alignment:
Q  185 taataatttaagaaaatcacataatttaatgtaattat 222  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  14731720 taataatttgagaaaatcacataatttagtgtaattat 14731757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 222
Target Start/End: Complemental strand, 20785516 - 20785479
Alignment:
Q  185 taataatttaagaaaatcacataatttaatgtaattat 222  Q
    ||||||||| || |||||||||||||||||||||||||    
T  20785516 taataatttgaggaaatcacataatttaatgtaattat 20785479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 239
Target Start/End: Original strand, 20873077 - 20873133
Alignment:
Q  185 taataatttaagaaaatcacataatttaatgtaatt--atgtgtcggtgtcggacac 239  Q
    ||||||||| | |||||||||||||||| |||||||  | |||||||||||||||||    
T  20873077 taataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcggacac 20873133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 278
Target Start/End: Original strand, 25566916 - 25566949
Alignment:
Q  245 cacgcctaatccgaggagtgtcggtgcttcatag 278  Q
    |||||||||||||||||||||| |||||||||||    
T  25566916 cacgcctaatccgaggagtgtctgtgcttcatag 25566949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 278
Target Start/End: Original strand, 31514940 - 31514973
Alignment:
Q  245 cacgcctaatccgaggagtgtcggtgcttcatag 278  Q
    |||||||||||||||||||||| |||||||||||    
T  31514940 cacgcctaatccgaggagtgtccgtgcttcatag 31514973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 278
Target Start/End: Complemental strand, 36450727 - 36450694
Alignment:
Q  245 cacgcctaatccgaggagtgtcggtgcttcatag 278  Q
    |||||||||||||||||||||| |||||||||||    
T  36450727 cacgcctaatccgaggagtgtctgtgcttcatag 36450694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 222
Target Start/End: Complemental strand, 39954330 - 39954293
Alignment:
Q  185 taataatttaagaaaatcacataatttaatgtaattat 222  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  39954330 taataatttgagaaaatcacataatttagtgtaattat 39954293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 185 - 221
Target Start/End: Complemental strand, 4298937 - 4298901
Alignment:
Q  185 taataatttaagaaaatcacataatttaatgtaatta 221  Q
    ||||||||| | |||||||||||||||||||||||||    
T  4298937 taataatttgaaaaaatcacataatttaatgtaatta 4298901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 185 - 278
Target Start/End: Original strand, 4948660 - 4948754
Alignment:
Q  185 taataatttaagaaaatcacataatttaatgtaatt--atgtgtcggtgtcggacacctgagcacgcctaatccgaggagtgtcggtgcttcatag 278  Q
    ||||||||| | |||||||||||||| | |||||||  | |||||||||||||||||  || |||||||||||  | ||||||  |||||||||||    
T  4948660 taataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcggacacgaga-cacgcctaatcgaatgagtgtacgtgcttcatag 4948754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 185 - 266
Target Start/End: Complemental strand, 8798882 - 8798805
Alignment:
Q  185 taataatttaagaaaatcacataatttaatgtaattatgtgtcggtgtcggacacctgagcacgcctaatccgaggagtgtc 266  Q
    ||||||||| ||||||| |||||||| ||| ||||||| |||    ||| |||||| || |||||||||||| |||||||||    
T  8798882 taataatttgagaaaataacataattcaatataattatatgt----gtccgacaccggaacacgcctaatccaaggagtgtc 8798805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 186 - 234
Target Start/End: Original strand, 9382981 - 9383029
Alignment:
Q  186 aataatttaagaaaatcacataatttaatgtaattatgtgtcggtgtcg 234  Q
    |||||||| ||||||  |||||||| |||||||||||||||| ||||||    
T  9382981 aataatttgagaaaactacataattcaatgtaattatgtgtctgtgtcg 9383029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 185 - 234
Target Start/End: Complemental strand, 15816180 - 15816129
Alignment:
Q  185 taataatttaagaaaatcacataatttaatgtaattat--gtgtcggtgtcg 234  Q
    ||||||||| | |||||||||||||||| |||||||||  ||||||||||||    
T  15816180 taataatttgaaaaaatcacataatttagtgtaattataagtgtcggtgtcg 15816129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 185 - 233
Target Start/End: Complemental strand, 24017489 - 24017441
Alignment:
Q  185 taataatttaagaaaatcacataatttaatgtaattatgtgtcggtgtc 233  Q
    ||||||||| ||| ||||| |||||| ||||||||||||| ||||||||    
T  24017489 taataatttgagacaatcatataattcaatgtaattatgtatcggtgtc 24017441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 185 - 239
Target Start/End: Original strand, 6770551 - 6770605
Alignment:
Q  185 taataatttaagaaaatcacataatttaatgtaattatgtgtcggtgtcggacac 239  Q
    |||||||||||||||||||||||||| | |||| ||||||||| |||||||||||    
T  6770551 taataatttaagaaaatcacataattcagtgtacttatgtgtcagtgtcggacac 6770605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 17925223 - 17925166
Alignment:
Q  185 taataatttaagaaaatcacataatttaatgtaat--tatgtgtcggtgtcggacacc 240  Q
    |||||||||||||||||||||||||| ||||||||  ||||||||||||||| |||||    
T  17925223 taataatttaagaaaatcacataattcaatgtaataatatgtgtcggtgtcgaacacc 17925166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 188 - 279
Target Start/End: Complemental strand, 6326345 - 6326252
Alignment:
Q  188 taatttaagaaaatcacataatttaatgtaattat--gtgtcggtgtcggacacctgagcacgcctaatccgaggagtgtcggtgcttcatagg 279  Q
    |||||| ||||||| |||||||| | ||||||||   ||||| | |||||||||| || |||||||||| |||| |||||| ||||||||||||    
T  6326345 taatttgagaaaattacataattcagtgtaattacaagtgtcagcgtcggacaccggaacacgcctaattcgagaagtgtccgtgcttcatagg 6326252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 185 - 239
Target Start/End: Complemental strand, 23012459 - 23012403
Alignment:
Q  185 taataatttaagaaaatcacataatttaatgtaat--tatgtgtcggtgtcggacac 239  Q
    ||||||||| ||||||||| |||||||||||||||  ||||||||||||| ||||||    
T  23012459 taataatttgagaaaatcatataatttaatgtaattatatgtgtcggtgttggacac 23012403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 185 - 239
Target Start/End: Complemental strand, 28588725 - 28588669
Alignment:
Q  185 taataatttaagaaaatcacataatttaatgtaattat--gtgtcggtgtcggacac 239  Q
    ||||||||| |||||||||||||||| | |||||||||  |||||||||||||||||    
T  28588725 taataatttgagaaaatcacataattcagtgtaattataggtgtcggtgtcggacac 28588669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 185 - 239
Target Start/End: Original strand, 33178033 - 33178089
Alignment:
Q  185 taataatttaagaaaatcacataatttaatgtaatt--atgtgtcggtgtcggacac 239  Q
    ||||||||||| |||||||||||||||| |||||||  | |||||||||||||||||    
T  33178033 taataatttaaaaaaatcacataatttagtgtaattacaagtgtcggtgtcggacac 33178089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 238
Target Start/End: Complemental strand, 16203846 - 16203791
Alignment:
Q  185 taataatttaagaaaatcacataatttaatgtaattat--gtgtcggtgtcggaca 238  Q
    ||||||||| |||||||| ||||||||| |||||||||  ||||||||||||||||    
T  16203846 taataatttgagaaaatctcataatttagtgtaattatatgtgtcggtgtcggaca 16203791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 223 - 279
Target Start/End: Complemental strand, 39696005 - 39695950
Alignment:
Q  223 gtgtcggtgtcggacacctgagcacgcctaatccgaggagtgtcggtgcttcatagg 279  Q
    ||||||||||| |||||  || |||||||||||| ||||||||||||||||||||||    
T  39696005 gtgtcggtgtccgacacggga-cacgcctaatcctaggagtgtcggtgcttcatagg 39695950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 279
Target Start/End: Original strand, 10298636 - 10298670
Alignment:
Q  245 cacgcctaatccgaggagtgtcggtgcttcatagg 279  Q
    |||||||||||||||||||||| ||||||||||||    
T  10298636 cacgcctaatccgaggagtgtccgtgcttcatagg 10298670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 279
Target Start/End: Original strand, 14873608 - 14873642
Alignment:
Q  245 cacgcctaatccgaggagtgtcggtgcttcatagg 279  Q
    |||||||||||||||||||||| ||||||||||||    
T  14873608 cacgcctaatccgaggagtgtccgtgcttcatagg 14873642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 278
Target Start/End: Original strand, 7677802 - 7677835
Alignment:
Q  245 cacgcctaatccgaggagtgtcggtgcttcatag 278  Q
    |||||||||||||||||| |||||||||||||||    
T  7677802 cacgcctaatccgaggagagtcggtgcttcatag 7677835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 278
Target Start/End: Original strand, 17123133 - 17123166
Alignment:
Q  245 cacgcctaatccgaggagtgtcggtgcttcatag 278  Q
    |||||||||||||||||||||| |||||||||||    
T  17123133 cacgcctaatccgaggagtgtccgtgcttcatag 17123166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 278
Target Start/End: Complemental strand, 21576718 - 21576685
Alignment:
Q  245 cacgcctaatccgaggagtgtcggtgcttcatag 278  Q
    |||||||||||||||||||||| |||||||||||    
T  21576718 cacgcctaatccgaggagtgtccgtgcttcatag 21576685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 278
Target Start/End: Complemental strand, 22423797 - 22423764
Alignment:
Q  245 cacgcctaatccgaggagtgtcggtgcttcatag 278  Q
    |||||||||||||||||||||| |||||||||||    
T  22423797 cacgcctaatccgaggagtgtccgtgcttcatag 22423764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 222
Target Start/End: Original strand, 30098334 - 30098371
Alignment:
Q  185 taataatttaagaaaatcacataatttaatgtaattat 222  Q
    ||||||||| |||||||||||||||| |||||||||||    
T  30098334 taataatttgagaaaatcacataattcaatgtaattat 30098371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 239
Target Start/End: Complemental strand, 30502439 - 30502383
Alignment:
Q  185 taataatttaagaaaatcacataatttaatgtaattat--gtgtcggtgtcggacac 239  Q
    ||||||||| |||||||||| ||||| | |||||||||  |||||||||||||||||    
T  30502439 taataatttgagaaaatcacttaattcagtgtaattatatgtgtcggtgtcggacac 30502383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 239
Target Start/End: Complemental strand, 30542782 - 30542726
Alignment:
Q  185 taataatttaagaaaatcacataatttaatgtaattat--gtgtcggtgtcggacac 239  Q
    ||||||||| |||||||||| ||||| | |||||||||  |||||||||||||||||    
T  30542782 taataatttgagaaaatcacttaattcagtgtaattatatgtgtcggtgtcggacac 30542726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 222
Target Start/End: Original strand, 35017045 - 35017082
Alignment:
Q  185 taataatttaagaaaatcacataatttaatgtaattat 222  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  35017045 taataatttgagaaaatcacataatttagtgtaattat 35017082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 278
Target Start/End: Original strand, 35017129 - 35017162
Alignment:
Q  245 cacgcctaatccgaggagtgtcggtgcttcatag 278  Q
    |||||||||||||||||||||| |||||||||||    
T  35017129 cacgcctaatccgaggagtgtccgtgcttcatag 35017162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 278
Target Start/End: Original strand, 39698638 - 39698671
Alignment:
Q  245 cacgcctaatccgaggagtgtcggtgcttcatag 278  Q
    |||||||||||||||||||||| |||||||||||    
T  39698638 cacgcctaatccgaggagtgtccgtgcttcatag 39698671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 197 - 239
Target Start/End: Original strand, 43564901 - 43564945
Alignment:
Q  197 aaaatcacataatttaatgtaattat--gtgtcggtgtcggacac 239  Q
    |||||||||||||||| |||||||||  |||||||||||||||||    
T  43564901 aaaatcacataatttagtgtaattataagtgtcggtgtcggacac 43564945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 185 - 221
Target Start/End: Original strand, 12159960 - 12159996
Alignment:
Q  185 taataatttaagaaaatcacataatttaatgtaatta 221  Q
    ||||||||||| |||| ||||||||||||||||||||    
T  12159960 taataatttaaaaaaaacacataatttaatgtaatta 12159996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 190 - 239
Target Start/End: Complemental strand, 17482524 - 17482473
Alignment:
Q  190 atttaagaaaatcacataatttaatgtaattat--gtgtcggtgtcggacac 239  Q
    |||| ||||||| |||| |||||||||||||||  |||||||||||||||||    
T  17482524 atttgagaaaatgacatgatttaatgtaattatgtgtgtcggtgtcggacac 17482473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 230 - 278
Target Start/End: Complemental strand, 21194111 - 21194063
Alignment:
Q  230 tgtcggacacctgagcacgcctaatccgaggagtgtcggtgcttcatag 278  Q
    |||| |||||| | ||||||||||||||||||||||| |||||| ||||    
T  21194111 tgtcagacaccggggcacgcctaatccgaggagtgtccgtgctttatag 21194063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 236 - 276
Target Start/End: Original strand, 43001882 - 43001922
Alignment:
Q  236 acacctgagcacgcctaatccgaggagtgtcggtgcttcat 276  Q
    |||||||  |||||||||||||||||||||| |||||||||    
T  43001882 acacctggacacgcctaatccgaggagtgtccgtgcttcat 43001922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 245 - 281
Target Start/End: Original strand, 43564967 - 43565003
Alignment:
Q  245 cacgcctaatccgaggagtgtcggtgcttcataggtc 281  Q
    ||||||||||||||| |||||| ||||||||||||||    
T  43564967 cacgcctaatccgagaagtgtccgtgcttcataggtc 43565003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 28)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 185 - 239
Target Start/End: Original strand, 11251986 - 11252040
Alignment:
Q  185 taataatttaagaaaatcacataatttaatgtaattatgtgtcggtgtcggacac 239  Q
    ||||||||| |||||||||||||||| | |||||||||||||||||||| |||||    
T  11251986 taataatttgagaaaatcacataattcagtgtaattatgtgtcggtgtcagacac 11252040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 185 - 230
Target Start/End: Complemental strand, 27277889 - 27277844
Alignment:
Q  185 taataatttaagaaaatcacataatttaatgtaattatgtgtcggt 230  Q
    ||||||||| |||||||||||||||||| |||||||||||||||||    
T  27277889 taataatttgagaaaatcacataatttagtgtaattatgtgtcggt 27277844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 185 - 239
Target Start/End: Complemental strand, 49505205 - 49505149
Alignment:
Q  185 taataatttaagaaaatcacataatttaatgtaat--tatgtgtcggtgtcggacac 239  Q
    ||||||||| |||||||||||||||||| ||||||  |||||||| |||||||||||    
T  49505205 taataatttgagaaaatcacataatttagtgtaattatatgtgtcagtgtcggacac 49505149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 189 - 232
Target Start/End: Complemental strand, 5441078 - 5441035
Alignment:
Q  189 aatttaagaaaatcacataatttaatgtaattatgtgtcggtgt 232  Q
    ||||| |||||||||||||||| |||| ||||||||||||||||    
T  5441078 aatttgagaaaatcacataattcaatggaattatgtgtcggtgt 5441035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 266
Target Start/End: Original strand, 13414487 - 13414560
Alignment:
Q  195 agaaaatcacataatttaatgtaattat--gtgtcggtgtcggacacctgagcacgcctaatccgaggagtgtc 266  Q
    ||||||||| |||||| |||||||||||  |||||||||||||||||  |  ||||||| ||||||| ||||||    
T  13414487 agaaaatcaaataattcaatgtaattatatgtgtcggtgtcggacacagggacacgccttatccgagaagtgtc 13414560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 238
Target Start/End: Original strand, 35222956 - 35223001
Alignment:
Q  195 agaaaatcacataatttaatgtaat--tatgtgtcggtgtcggaca 238  Q
    |||||||||||||||| ||||||||  |||||||||||||||||||    
T  35222956 agaaaatcacataattcaatgtaattatatgtgtcggtgtcggaca 35223001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 278
Target Start/End: Complemental strand, 4990945 - 4990912
Alignment:
Q  245 cacgcctaatccgaggagtgtcggtgcttcatag 278  Q
    |||||||||||||||||||||| |||||||||||    
T  4990945 cacgcctaatccgaggagtgtccgtgcttcatag 4990912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 218
Target Start/End: Original strand, 5339116 - 5339149
Alignment:
Q  185 taataatttaagaaaatcacataatttaatgtaa 218  Q
    ||||||||| ||||||||||||||||||||||||    
T  5339116 taataatttgagaaaatcacataatttaatgtaa 5339149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 239
Target Start/End: Original strand, 7928458 - 7928514
Alignment:
Q  185 taataatttaagaaaatcacataatttaatgtaat--tatgtgtcggtgtcggacac 239  Q
    ||||||||| | |||||||||||||| | ||||||  ||||||||||||||||||||    
T  7928458 taataatttgaaaaaatcacataattcagtgtaattatatgtgtcggtgtcggacac 7928514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 239
Target Start/End: Original strand, 8383265 - 8383321
Alignment:
Q  185 taataatttaagaaaatcacataatttaatgtaattat--gtgtcggtgtcggacac 239  Q
    ||||||||| ||||||||| |||||| | |||||||||  |||||||||||||||||    
T  8383265 taataatttgagaaaatcatataattcagtgtaattataagtgtcggtgtcggacac 8383321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 278
Target Start/End: Original strand, 8842415 - 8842448
Alignment:
Q  245 cacgcctaatccgaggagtgtcggtgcttcatag 278  Q
    |||||||||||||||||||||| |||||||||||    
T  8842415 cacgcctaatccgaggagtgtccgtgcttcatag 8842448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 222
Target Start/End: Original strand, 9624649 - 9624686
Alignment:
Q  185 taataatttaagaaaatcacataatttaatgtaattat 222  Q
    ||||||||| |||||||||||||||| |||||||||||    
T  9624649 taataatttgagaaaatcacataattcaatgtaattat 9624686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 263
Target Start/End: Complemental strand, 10268537 - 10268457
Alignment:
Q  185 taataatttaagaaaatcacataatttaatgtaatt--atgtgtcggtgtcggacacctgagcacgcctaatccgaggagt 263  Q
    ||||||||| | |||||||||||||||| |||||||  | ||||| ||||| |||||| || |||||||| ||| ||||||    
T  10268537 taataatttgaaaaaatcacataatttagtgtaattacaagtgtcagtgtcagacaccggaacacgcctagtcctaggagt 10268457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 278
Target Start/End: Original strand, 11252062 - 11252095
Alignment:
Q  245 cacgcctaatccgaggagtgtcggtgcttcatag 278  Q
    |||||||||||||||||||||| |||||||||||    
T  11252062 cacgcctaatccgaggagtgtctgtgcttcatag 11252095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 222
Target Start/End: Complemental strand, 11313851 - 11313814
Alignment:
Q  185 taataatttaagaaaatcacataatttaatgtaattat 222  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  11313851 taataatttgagaaaatcacataatttagtgtaattat 11313814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 278
Target Start/End: Original strand, 20503551 - 20503584
Alignment:
Q  245 cacgcctaatccgaggagtgtcggtgcttcatag 278  Q
    |||||||||||||||||||||| |||||||||||    
T  20503551 cacgcctaatccgaggagtgtccgtgcttcatag 20503584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 275
Target Start/End: Original strand, 21367329 - 21367382
Alignment:
Q  222 tgtgtcggtgtcggacacctgagcacgcctaatccgaggagtgtcggtgcttca 275  Q
    |||||||||||||||||| ||  ||| ||||||||||| |||||| ||||||||    
T  21367329 tgtgtcggtgtcggacacttggacacacctaatccgagaagtgtctgtgcttca 21367382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 229
Target Start/End: Complemental strand, 30582351 - 30582306
Alignment:
Q  185 taataatttaagaaaa-tcacataatttaatgtaattatgtgtcgg 229  Q
    |||||||||| ||||| ||| |||||||||||||||||||||||||    
T  30582351 taataatttatgaaaaatcatataatttaatgtaattatgtgtcgg 30582306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 222
Target Start/End: Complemental strand, 32804591 - 32804554
Alignment:
Q  185 taataatttaagaaaatcacataatttaatgtaattat 222  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  32804591 taataatttgagaaaatcacataatttagtgtaattat 32804554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 278
Target Start/End: Complemental strand, 34185085 - 34185052
Alignment:
Q  245 cacgcctaatccgaggagtgtcggtgcttcatag 278  Q
    |||||||||||||||||||||| |||||||||||    
T  34185085 cacgcctaatccgaggagtgtccgtgcttcatag 34185052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 222
Target Start/End: Original strand, 47362570 - 47362607
Alignment:
Q  185 taataatttaagaaaatcacataatttaatgtaattat 222  Q
    ||||||||||||||||| |||||||| |||||||||||    
T  47362570 taataatttaagaaaattacataattgaatgtaattat 47362607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 222
Target Start/End: Complemental strand, 48202320 - 48202283
Alignment:
Q  185 taataatttaagaaaatcacataatttaatgtaattat 222  Q
    ||||| ||| ||||||||||||||||||||||||||||    
T  48202320 taatagtttgagaaaatcacataatttaatgtaattat 48202283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 239
Target Start/End: Original strand, 55401083 - 55401139
Alignment:
Q  185 taataatttaagaaaatcacataatttaatgtaatt--atgtgtcggtgtcggacac 239  Q
    ||||||||| | |||||||||||||||| |||||||  | |||||||||||||||||    
T  55401083 taataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcggacac 55401139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 278
Target Start/End: Original strand, 55401161 - 55401194
Alignment:
Q  245 cacgcctaatccgaggagtgtcggtgcttcatag 278  Q
    |||||||||||||||||||||| |||||||||||    
T  55401161 cacgcctaatccgaggagtgtccgtgcttcatag 55401194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 245 - 277
Target Start/End: Complemental strand, 8789521 - 8789489
Alignment:
Q  245 cacgcctaatccgaggagtgtcggtgcttcata 277  Q
    |||||||||||||||||||||| ||||||||||    
T  8789521 cacgcctaatccgaggagtgtccgtgcttcata 8789489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 185 - 221
Target Start/End: Complemental strand, 17568734 - 17568698
Alignment:
Q  185 taataatttaagaaaatcacataatttaatgtaatta 221  Q
    ||||||||| ||||||| |||||||||||||||||||    
T  17568734 taataatttgagaaaattacataatttaatgtaatta 17568698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 185 - 234
Target Start/End: Original strand, 28678311 - 28678362
Alignment:
Q  185 taataatttaagaaaatcacataatttaatgtaat--tatgtgtcggtgtcg 234  Q
    ||||||||||| |||||||||||||||| | ||||  |||||||||||||||    
T  28678311 taataatttaataaaatcacataatttagtataattgtatgtgtcggtgtcg 28678362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 185 - 221
Target Start/End: Original strand, 39756244 - 39756280
Alignment:
Q  185 taataatttaagaaaatcacataatttaatgtaatta 221  Q
    ||||||||||| |||||||||||||||||| ||||||    
T  39756244 taataatttaaaaaaatcacataatttaatataatta 39756280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 37; Significance: 0.000000000008; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 185 - 278
Target Start/End: Original strand, 28155578 - 28155673
Alignment:
Q  185 taataatttaagaaaatcacataatttaatgtaattat--gtgtcggtgtcggacacctgagcacgcctaatccgaggagtgtcggtgcttcatag 278  Q
    ||||||||| ||||||| ||||||||   ||||||||   |||||||||||||||||| |  |||||||||||| |||| |||| |||||||||||    
T  28155578 taataatttgagaaaattacataattcggtgtaattacaagtgtcggtgtcggacaccaggacacgcctaatccaaggaatgtccgtgcttcatag 28155673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 185 - 281
Target Start/End: Original strand, 35861972 - 35862073
Alignment:
Q  185 taataatttaagaaaatcacataatttaatgtaattat--gtgtcggtgtcg---gacacctgagcacgcctaatccgaggagtgtcggtgcttcatagg 279  Q
    ||||||||| | |||||||||||||| ||||||||| |  ||||| ||||||   |||||  |  |||||||||||||||||||||| ||||||||||||    
T  35861972 taataatttgaaaaaatcacataattcaatgtaattgtaagtgtctgtgtcgtcggacacgaggacacgcctaatccgaggagtgtccgtgcttcatagg 35862071  T
Q  280 tc 281  Q
    ||    
T  35862072 tc 35862073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 187 - 239
Target Start/End: Complemental strand, 3554555 - 3554501
Alignment:
Q  187 ataatttaagaaaatcacataatttaatgtaattat--gtgtcggtgtcggacac 239  Q
    ||||||||||||||| ||||||||||||||||||||   ||||||||||||||||    
T  3554555 ataatttaagaaaattacataatttaatgtaattatagatgtcggtgtcggacac 3554501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 185 - 239
Target Start/End: Original strand, 3721101 - 3721157
Alignment:
Q  185 taataatttaagaaaatcacataatttaatgtaat--tatgtgtcggtgtcggacac 239  Q
    ||||||||| |||||||||||||||||| | ||||  ||||||||||||||||||||    
T  3721101 taataatttgagaaaatcacataatttagtataattatatgtgtcggtgtcggacac 3721157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 185 - 239
Target Start/End: Original strand, 15680817 - 15680873
Alignment:
Q  185 taataatttaagaaaatcacataatttaatgtaattat--gtgtcggtgtcggacac 239  Q
    |||||||| || |||||||||||||||| |||||||||  |||||||||||||||||    
T  15680817 taataattaaaaaaaatcacataatttagtgtaattataagtgtcggtgtcggacac 15680873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 185 - 222
Target Start/End: Complemental strand, 27093464 - 27093427
Alignment:
Q  185 taataatttaagaaaatcacataatttaatgtaattat 222  Q
    |||||||||||||||||||||||||||| |||||||||    
T  27093464 taataatttaagaaaatcacataatttagtgtaattat 27093427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 185 - 222
Target Start/End: Original strand, 27184837 - 27184874
Alignment:
Q  185 taataatttaagaaaatcacataatttaatgtaattat 222  Q
    |||||||||||||||||||||||||||| |||||||||    
T  27184837 taataatttaagaaaatcacataatttagtgtaattat 27184874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 185 - 278
Target Start/End: Original strand, 30813820 - 30813916
Alignment:
Q  185 taataatttaagaaaatcacataatttaatgtaattat--gtgtcg-gtgtcggacacctgagcacgcctaatccgaggagtgtcggtgcttcatag 278  Q
    ||||||||| ||||||| |||||||| | ||||||||   |||| | ||||| |||| | || |||||||||||||||||||||| |||||||||||    
T  30813820 taataatttgagaaaattacataattcagtgtaattacaggtgttgcgtgtccgacatcagaacacgcctaatccgaggagtgtccgtgcttcatag 30813916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 185 - 238
Target Start/End: Original strand, 40656996 - 40657049
Alignment:
Q  185 taataatttaagaaaatcacataatttaatgtaattatgtgtcggtgtcggaca 238  Q
    |||||||||||||||||||| ||||| ||| |||||||||||| ||||| ||||    
T  40656996 taataatttaagaaaatcacttaattcaatataattatgtgtccgtgtcagaca 40657049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 278
Target Start/End: Original strand, 6490779 - 6490835
Alignment:
Q  222 tgtgtcggtgtcggacacctgagcacgcctaatccgaggagtgtcggtgcttcatag 278  Q
    |||||||||||| |||||| |  ||||| |||||||||||||||| |||||||||||    
T  6490779 tgtgtcggtgtccgacaccgggacacgcttaatccgaggagtgtccgtgcttcatag 6490835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 280
Target Start/End: Complemental strand, 23128637 - 23128601
Alignment:
Q  244 gcacgcctaatccgaggagtgtcggtgcttcataggt 280  Q
    ||||||||||||||||||||||| |||||||||||||    
T  23128637 gcacgcctaatccgaggagtgtctgtgcttcataggt 23128601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 186 - 234
Target Start/End: Original strand, 30731046 - 30731094
Alignment:
Q  186 aataatttaagaaaatcacataatttaatgtaattatgtgtcggtgtcg 234  Q
    |||||||| |||||||||||||||| | ||||||| |||||||||||||    
T  30731046 aataatttgagaaaatcacataattcagtgtaattgtgtgtcggtgtcg 30731094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 245 - 280
Target Start/End: Complemental strand, 5409804 - 5409769
Alignment:
Q  245 cacgcctaatccgaggagtgtcggtgcttcataggt 280  Q
    |||||||||||||||||||||| |||||||||||||    
T  5409804 cacgcctaatccgaggagtgtccgtgcttcataggt 5409769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 185 - 232
Target Start/End: Original strand, 11700811 - 11700858
Alignment:
Q  185 taataatttaagaaaatcacataatttaatgtaattatgtgtcggtgt 232  Q
    ||||||||| | |||||||||||||| |||||||||||||||| ||||    
T  11700811 taataatttgacaaaatcacataattcaatgtaattatgtgtctgtgt 11700858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 18213074 - 18213028
Alignment:
Q  195 agaaaatcacataatttaatgtaat--tatgtgtcggtgtcggacac 239  Q
    |||||||||||||||||| ||||||  ||||||||||||||||||||    
T  18213074 agaaaatcacataatttagtgtaattatatgtgtcggtgtcggacac 18213028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 185 - 232
Target Start/End: Complemental strand, 29787420 - 29787373
Alignment:
Q  185 taataatttaagaaaatcacataatttaatgtaattatgtgtcggtgt 232  Q
    ||||||||| |||||||||||||||| | ||||||||||||| |||||    
T  29787420 taataatttgagaaaatcacataattcagtgtaattatgtgttggtgt 29787373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 239
Target Start/End: Original strand, 598216 - 598272
Alignment:
Q  185 taataatttaagaaaatcacataatttaatgtaat--tatgtgtcggtgtcggacac 239  Q
    |||||||||||||||||||| ||||| ||||||||  || ||||||||||| |||||    
T  598216 taataatttaagaaaatcacgtaattaaatgtaattgtaagtgtcggtgtcagacac 598272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 222
Target Start/End: Original strand, 5956281 - 5956318
Alignment:
Q  185 taataatttaagaaaatcacataatttaatgtaattat 222  Q
    ||||||||||| ||||||| ||||||||||||||||||    
T  5956281 taataatttaaaaaaatcaaataatttaatgtaattat 5956318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 222
Target Start/End: Original strand, 8160424 - 8160461
Alignment:
Q  185 taataatttaagaaaatcacataatttaatgtaattat 222  Q
    ||||||||||||||||| |||||||||| |||||||||    
T  8160424 taataatttaagaaaattacataatttagtgtaattat 8160461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 239
Target Start/End: Original strand, 20549799 - 20549855
Alignment:
Q  185 taataatttaagaaaatcacataatttaatgtaattat--gtgtcggtgtcggacac 239  Q
    ||||||||| |||||||||| ||||| | |||||||||  |||||||||||||||||    
T  20549799 taataatttgagaaaatcacgtaattcagtgtaattatatgtgtcggtgtcggacac 20549855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 240
Target Start/End: Complemental strand, 22200490 - 22200453
Alignment:
Q  203 acataatttaatgtaattatgtgtcggtgtcggacacc 240  Q
    |||||||||||||||||||||||| ||||||| |||||    
T  22200490 acataatttaatgtaattatgtgttggtgtcgcacacc 22200453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 240
Target Start/End: Original strand, 22237331 - 22237368
Alignment:
Q  203 acataatttaatgtaattatgtgtcggtgtcggacacc 240  Q
    |||||||||||||||||||||||| ||||||| |||||    
T  22237331 acataatttaatgtaattatgtgttggtgtcgcacacc 22237368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 278
Target Start/End: Complemental strand, 29763162 - 29763129
Alignment:
Q  245 cacgcctaatccgaggagtgtcggtgcttcatag 278  Q
    |||||||||||||||||||||| |||||||||||    
T  29763162 cacgcctaatccgaggagtgtccgtgcttcatag 29763129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 222
Target Start/End: Original strand, 38143231 - 38143268
Alignment:
Q  185 taataatttaagaaaatcacataatttaatgtaattat 222  Q
    ||||||||| | ||||||||||||||||||||||||||    
T  38143231 taataatttgaaaaaatcacataatttaatgtaattat 38143268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 186 - 222
Target Start/End: Original strand, 3938152 - 3938188
Alignment:
Q  186 aataatttaagaaaatcacataatttaatgtaattat 222  Q
    |||||||||| |||||||||||||| |||||||||||    
T  3938152 aataatttaaaaaaatcacataattcaatgtaattat 3938188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 185 - 238
Target Start/End: Original strand, 24146824 - 24146879
Alignment:
Q  185 taataatttaagaaaatcacataatttaatgtaat--tatgtgtcggtgtcggaca 238  Q
    ||||||||| |||||||||||||||| ||| ||||  |||||||||||||| ||||    
T  24146824 taataattttagaaaatcacataattcaatataattatatgtgtcggtgtctgaca 24146879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 230 - 277
Target Start/End: Original strand, 92893 - 92940
Alignment:
Q  230 tgtcggacacctgagcacgcctaatccgaggagtgtcggtgcttcata 277  Q
    |||||||||||||  |||||||||||||||||||||| ||||||||||    
T  92893 tgtcggacacctggacacgcctaatccgaggagtgtccgtgcttcata 92940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 245 - 280
Target Start/End: Original strand, 71822 - 71857
Alignment:
Q  245 cacgcctaatccgaggagtgtcggtgcttcataggt 280  Q
    |||| |||||||||||||||||||||||||||||||    
T  71822 cacgactaatccgaggagtgtcggtgcttcataggt 71857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0475 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 279
Target Start/End: Original strand, 3394 - 3428
Alignment:
Q  245 cacgcctaatccgaggagtgtcggtgcttcatagg 279  Q
    |||||||||||||||||||||| ||||||||||||    
T  3394 cacgcctaatccgaggagtgtccgtgcttcatagg 3428  T

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Target: scaffold0110 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 232
Target Start/End: Original strand, 28858 - 28907
Alignment:
Q  185 taataatttaagaaaatcacataatttaatgtaat--tatgtgtcggtgt 232  Q
    |||||||||||||||||| ||||||| ||||||||  |||||||||||||    
T  28858 taataatttaagaaaatcgcataattcaatgtaattatatgtgtcggtgt 28907  T

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Target: scaffold0793 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 278
Target Start/End: Complemental strand, 4854 - 4821
Alignment:
Q  245 cacgcctaatccgaggagtgtcggtgcttcatag 278  Q
    |||||||||||||||||||||| |||||||||||    
T  4854 cacgcctaatccgaggagtgtccgtgcttcatag 4821  T

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Target: scaffold0316 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 234
Target Start/End: Original strand, 16144 - 16193
Alignment:
Q  185 taataatttaagaaaatcacataatttaatgtaattatgtgtcggtgtcg 234  Q
    ||||||||||||||||| | |||||| || ||||| ||||||||||||||    
T  16144 taataatttaagaaaatgaaataattcaacgtaataatgtgtcggtgtcg 16193  T

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Target: scaffold0027 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 278
Target Start/End: Original strand, 46743 - 46776
Alignment:
Q  245 cacgcctaatccgaggagtgtcggtgcttcatag 278  Q
    |||||||||||||||||||||| |||||||||||    
T  46743 cacgcctaatccgaggagtgtccgtgcttcatag 46776  T

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Target: scaffold0236 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 185 - 234
Target Start/End: Complemental strand, 25819 - 25768
Alignment:
Q  185 taataatttaagaaaatcacataatttaatgtaattat--gtgtcggtgtcg 234  Q
    ||||||||  |||||||||||||||||| |||||||||  ||||||||||||    
T  25819 taataattagagaaaatcacataatttagtgtaattataagtgtcggtgtcg 25768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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