View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8423_low_2 (Length: 548)

Name: NF8423_low_2
Description: NF8423
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8423_low_2
NF8423_low_2
[»] chr3 (60 HSPs)
chr3 (157-529)||(23511593-23511969)
chr3 (19-140)||(33121865-33121986)
chr3 (19-133)||(36634916-36635030)
chr3 (19-140)||(11639437-11639558)
chr3 (19-140)||(8695439-8695560)
chr3 (19-140)||(9047326-9047447)
chr3 (61-140)||(1764603-1764682)
chr3 (15-140)||(25341878-25342004)
chr3 (62-140)||(32233670-32233749)
chr3 (448-531)||(54261250-54261333)
chr3 (448-523)||(45877486-45877561)
chr3 (446-523)||(26043844-26043921)
chr3 (446-523)||(29127951-29128028)
chr3 (446-531)||(47219168-47219253)
chr3 (447-531)||(55069678-55069762)
chr3 (15-140)||(26845341-26845467)
chr3 (449-523)||(3507534-3507608)
chr3 (36-140)||(47536740-47536845)
chr3 (446-519)||(49021201-49021274)
chr3 (448-523)||(35315988-35316063)
chr3 (446-521)||(45402349-45402424)
chr3 (448-523)||(47471863-47471938)
chr3 (446-523)||(3136692-3136769)
chr3 (446-511)||(7310701-7310766)
chr3 (446-531)||(15320210-15320295)
chr3 (446-531)||(24506646-24506731)
chr3 (446-523)||(25294992-25295069)
chr3 (446-531)||(28572209-28572294)
chr3 (470-531)||(32873571-32873632)
chr3 (470-531)||(41630534-41630595)
chr3 (446-523)||(47749103-47749180)
chr3 (448-532)||(29762155-29762239)
chr3 (61-140)||(32093502-32093582)
chr3 (471-523)||(47303512-47303564)
chr3 (26-140)||(19221599-19221712)
chr3 (469-523)||(49198383-49198437)
chr3 (449-523)||(53649759-53649833)
chr3 (482-531)||(6462436-6462485)
chr3 (446-531)||(13893950-13894035)
chr3 (446-523)||(29135945-29136022)
chr3 (446-511)||(44064588-44064653)
chr3 (446-523)||(51060279-51060356)
chr3 (447-523)||(7328876-7328951)
chr3 (450-498)||(8683242-8683290)
chr3 (452-531)||(10040580-10040659)
chr3 (472-531)||(33251686-33251745)
chr3 (476-531)||(42412802-42412857)
chr3 (74-140)||(49500936-49501003)
chr3 (446-496)||(36043672-36043722)
chr3 (446-519)||(928636-928709)
chr3 (470-531)||(3755594-3755655)
chr3 (446-531)||(26361965-26362050)
chr3 (446-515)||(29195317-29195386)
chr3 (482-531)||(39849095-39849144)
chr3 (446-523)||(54237480-54237557)
chr3 (448-496)||(19147020-19147068)
chr3 (463-523)||(30767262-30767322)
chr3 (447-531)||(31072902-31072986)
chr3 (447-531)||(48342044-48342128)
chr3 (447-523)||(52168569-52168645)
[»] chr8 (37 HSPs)
chr8 (19-140)||(10583963-10584084)
chr8 (19-140)||(8446718-8446839)
chr8 (446-531)||(10927634-10927719)
chr8 (26-132)||(45256382-45256487)
chr8 (15-140)||(29470742-29470866)
chr8 (449-531)||(4479296-4479378)
chr8 (446-531)||(6100500-6100585)
chr8 (36-140)||(31082172-31082277)
chr8 (447-531)||(43027333-43027417)
chr8 (447-531)||(43032929-43033013)
chr8 (446-531)||(26570952-26571037)
chr8 (447-531)||(8141130-8141214)
chr8 (61-140)||(17658303-17658383)
chr8 (447-518)||(45521209-45521280)
chr8 (447-531)||(8997542-8997626)
chr8 (447-523)||(9859993-9860069)
chr8 (464-531)||(18374038-18374105)
chr8 (473-531)||(1013001-1013059)
chr8 (449-523)||(15884556-15884630)
chr8 (446-523)||(2467115-2467192)
chr8 (446-519)||(10535401-10535474)
chr8 (446-531)||(14846603-14846688)
chr8 (36-89)||(23679687-23679740)
chr8 (447-523)||(16291201-16291277)
chr8 (74-137)||(26030965-26031028)
chr8 (463-519)||(29933812-29933868)
chr8 (448-520)||(36662443-36662515)
chr8 (448-531)||(68097-68180)
chr8 (74-140)||(36156625-36156692)
chr8 (446-520)||(11298264-11298338)
chr8 (446-528)||(16893968-16894048)
chr8 (446-531)||(2964104-2964189)
chr8 (446-531)||(24837270-24837355)
chr8 (446-511)||(27975939-27976004)
chr8 (446-511)||(28033208-28033273)
chr8 (447-523)||(3418511-3418587)
chr8 (77-117)||(10267600-10267640)
[»] chr7 (51 HSPs)
chr7 (19-140)||(34231170-34231291)
chr7 (19-140)||(29114097-29114218)
chr7 (19-139)||(24752890-24753010)
chr7 (26-140)||(18654387-18654503)
chr7 (33-140)||(20037562-20037670)
chr7 (26-140)||(20047686-20047801)
chr7 (446-531)||(17748379-17748464)
chr7 (448-523)||(27028314-27028389)
chr7 (448-531)||(38578866-38578949)
chr7 (446-523)||(13095893-13095970)
chr7 (446-531)||(43861969-43862054)
chr7 (446-531)||(48551884-48551969)
chr7 (448-528)||(41945503-41945583)
chr7 (447-523)||(48804718-48804794)
chr7 (26-140)||(7459226-7459340)
chr7 (449-531)||(26423288-26423369)
chr7 (446-531)||(1605968-1606053)
chr7 (446-523)||(28744197-28744274)
chr7 (19-117)||(4076768-4076867)
chr7 (450-523)||(18785704-18785777)
chr7 (446-531)||(22993364-22993449)
chr7 (446-531)||(42210259-42210344)
chr7 (447-523)||(4195200-4195276)
chr7 (446-517)||(24983415-24983487)
chr7 (447-531)||(42032123-42032207)
chr7 (447-523)||(43346777-43346853)
chr7 (464-531)||(16802150-16802217)
chr7 (469-523)||(5039438-5039492)
chr7 (469-531)||(23658206-23658268)
chr7 (449-523)||(27875088-27875162)
chr7 (482-531)||(4228787-4228836)
chr7 (446-511)||(5069812-5069877)
chr7 (446-523)||(10047873-10047950)
chr7 (446-519)||(14650356-14650429)
chr7 (446-523)||(21530783-21530860)
chr7 (446-531)||(22973994-22974079)
chr7 (446-531)||(29151967-29152052)
chr7 (446-531)||(39420864-39420949)
chr7 (446-523)||(47341911-47341988)
chr7 (447-531)||(34659253-34659337)
chr7 (447-531)||(39474967-39475051)
chr7 (472-523)||(3353459-3353510)
chr7 (464-523)||(38988935-38988994)
chr7 (446-509)||(48244353-48244416)
chr7 (448-518)||(3603397-3603467)
chr7 (446-512)||(32768983-32769049)
chr7 (76-140)||(23397267-23397331)
chr7 (68-136)||(28060051-28060120)
chr7 (467-511)||(4973128-4973172)
chr7 (447-523)||(8734684-8734760)
chr7 (472-532)||(45960026-45960086)
[»] chr4 (70 HSPs)
chr4 (19-141)||(18107104-18107226)
chr4 (19-140)||(30274360-30274482)
chr4 (19-140)||(34322867-34322988)
chr4 (19-140)||(42822915-42823036)
chr4 (19-140)||(449522-449643)
chr4 (19-140)||(52741386-52741506)
chr4 (25-140)||(19164457-19164572)
chr4 (19-140)||(42777710-42777830)
chr4 (19-140)||(53487501-53487622)
chr4 (19-140)||(31863737-31863858)
chr4 (19-140)||(34005365-34005486)
chr4 (19-140)||(12881233-12881355)
chr4 (19-86)||(55854319-55854386)
chr4 (18-140)||(1844804-1844928)
chr4 (447-531)||(16450329-16450413)
chr4 (447-531)||(52950111-52950195)
chr4 (26-140)||(53779514-53779630)
chr4 (448-531)||(7246645-7246728)
chr4 (448-531)||(42722576-42722659)
chr4 (449-531)||(40780861-40780943)
chr4 (446-531)||(36145212-36145297)
chr4 (446-531)||(38168286-38168370)
chr4 (446-531)||(53599089-53599174)
chr4 (447-531)||(38075462-38075546)
chr4 (448-528)||(43458645-43458725)
chr4 (447-531)||(47078487-47078571)
chr4 (447-523)||(55921071-55921147)
chr4 (447-522)||(6779249-6779324)
chr4 (26-140)||(10563864-10563978)
chr4 (446-531)||(36262764-36262849)
chr4 (26-140)||(29213535-29213651)
chr4 (447-531)||(38166056-38166140)
chr4 (448-531)||(2559336-2559419)
chr4 (448-523)||(14124053-14124128)
chr4 (15-113)||(20395096-20395192)
chr4 (448-523)||(29895824-29895899)
chr4 (448-523)||(31588723-31588798)
chr4 (449-519)||(6032643-6032713)
chr4 (447-521)||(48834698-48834772)
chr4 (446-531)||(4738647-4738732)
chr4 (447-528)||(47682380-47682461)
chr4 (446-531)||(49260662-49260747)
chr4 (447-531)||(3159467-3159551)
chr4 (447-531)||(5472846-5472930)
chr4 (447-531)||(16645147-16645231)
chr4 (447-531)||(17080072-17080156)
chr4 (463-531)||(48352523-48352591)
chr4 (448-523)||(14567276-14567351)
chr4 (469-531)||(3507299-3507361)
chr4 (457-523)||(8889059-8889125)
chr4 (449-523)||(13073575-13073649)
chr4 (469-531)||(20532429-20532491)
chr4 (458-531)||(40272340-40272413)
chr4 (446-531)||(50485972-50486057)
chr4 (476-523)||(1446863-1446910)
chr4 (468-531)||(7741954-7742017)
chr4 (448-531)||(30317262-30317345)
chr4 (448-531)||(43468376-43468459)
chr4 (482-528)||(15839968-15840014)
chr4 (449-531)||(33647750-33647832)
chr4 (484-522)||(37194848-37194886)
chr4 (453-523)||(46108728-46108798)
chr4 (446-531)||(21192669-21192754)
chr4 (450-531)||(21429330-21429411)
chr4 (447-523)||(15732446-15732522)
chr4 (447-519)||(17946530-17946602)
chr4 (447-531)||(24166479-24166563)
chr4 (446-490)||(25406560-25406604)
chr4 (447-523)||(29588773-29588849)
chr4 (448-531)||(49952144-49952228)
[»] chr2 (52 HSPs)
chr2 (19-141)||(3000296-3000418)
chr2 (19-140)||(7075583-7075704)
chr2 (26-140)||(9393007-9393122)
chr2 (446-531)||(7747298-7747383)
chr2 (446-531)||(41220659-41220744)
chr2 (447-531)||(25540402-25540486)
chr2 (446-523)||(22593166-22593242)
chr2 (446-531)||(38005426-38005511)
chr2 (447-531)||(3643885-3643969)
chr2 (469-531)||(24179592-24179654)
chr2 (457-523)||(39201516-39201582)
chr2 (446-531)||(10823084-10823169)
chr2 (446-531)||(12455334-12455419)
chr2 (463-531)||(10026630-10026698)
chr2 (448-531)||(38962787-38962870)
chr2 (446-531)||(2528338-2528423)
chr2 (446-531)||(20116609-20116694)
chr2 (60-140)||(22295919-22296000)
chr2 (446-523)||(26805328-26805405)
chr2 (96-140)||(1379570-1379614)
chr2 (447-531)||(11069902-11069986)
chr2 (447-523)||(16325627-16325703)
chr2 (447-531)||(42770649-42770733)
chr2 (464-523)||(6358166-6358225)
chr2 (448-531)||(16034961-16035044)
chr2 (448-523)||(33005783-33005858)
chr2 (457-531)||(10669616-10669690)
chr2 (469-531)||(39806905-39806967)
chr2 (19-80)||(1379614-1379674)
chr2 (446-511)||(3811688-3811753)
chr2 (446-523)||(8410163-8410240)
chr2 (446-531)||(13026408-13026493)
chr2 (446-523)||(34346284-34346361)
chr2 (26-113)||(24313978-24314066)
chr2 (447-531)||(44139508-44139592)
chr2 (448-531)||(9360747-9360830)
chr2 (463-518)||(10046491-10046546)
chr2 (448-519)||(14169608-14169679)
chr2 (448-523)||(18649025-18649100)
chr2 (74-140)||(18704397-18704464)
chr2 (449-523)||(20612534-20612609)
chr2 (448-531)||(35946762-35946845)
chr2 (448-531)||(44773287-44773370)
chr2 (464-531)||(45263682-45263749)
chr2 (469-523)||(331533-331587)
chr2 (26-107)||(30273503-30273585)
chr2 (482-523)||(21180347-21180388)
chr2 (446-531)||(34722704-34722789)
chr2 (446-531)||(37560197-37560282)
chr2 (446-531)||(44945617-44945702)
chr2 (447-531)||(18902528-18902612)
chr2 (447-523)||(41031904-41031980)
[»] chr1 (55 HSPs)
chr1 (19-140)||(17707467-17707588)
chr1 (19-140)||(40292633-40292753)
chr1 (19-140)||(10722510-10722629)
chr1 (19-140)||(9903813-9903934)
chr1 (42-140)||(10711675-10711773)
chr1 (25-140)||(30111478-30111593)
chr1 (31-140)||(25592034-25592143)
chr1 (19-140)||(49968797-49968919)
chr1 (447-531)||(5855547-5855631)
chr1 (74-140)||(1395037-1395103)
chr1 (447-523)||(10422821-10422897)
chr1 (61-140)||(47107254-47107334)
chr1 (446-523)||(49078147-49078224)
chr1 (447-531)||(10172970-10173054)
chr1 (61-140)||(41061735-41061814)
chr1 (447-531)||(45361881-45361965)
chr1 (446-523)||(8764024-8764101)
chr1 (446-523)||(17642002-17642079)
chr1 (446-523)||(26325845-26325922)
chr1 (447-523)||(4581681-4581757)
chr1 (447-523)||(32142845-32142921)
chr1 (446-528)||(25178574-25178656)
chr1 (448-517)||(5504070-5504139)
chr1 (472-529)||(33498863-33498920)
chr1 (446-523)||(41663854-41663931)
chr1 (446-531)||(43959819-43959904)
chr1 (447-531)||(9659178-9659262)
chr1 (447-531)||(11397888-11397972)
chr1 (447-531)||(15465990-15466074)
chr1 (447-531)||(16956491-16956575)
chr1 (446-530)||(37339846-37339930)
chr1 (447-531)||(46929737-46929821)
chr1 (469-523)||(45726454-45726508)
chr1 (446-531)||(10507723-10507808)
chr1 (458-531)||(14254278-14254351)
chr1 (470-531)||(17092499-17092560)
chr1 (446-523)||(18708538-18708615)
chr1 (446-523)||(18915900-18915977)
chr1 (447-531)||(32896-32980)
chr1 (447-511)||(26660183-26660246)
chr1 (447-531)||(30927726-30927810)
chr1 (447-523)||(32150921-32150997)
chr1 (470-530)||(33418137-33418197)
chr1 (472-531)||(10336541-10336600)
chr1 (448-531)||(16263570-16263653)
chr1 (472-531)||(38791634-38791693)
chr1 (447-498)||(51437515-51437566)
chr1 (446-528)||(34719804-34719886)
chr1 (446-511)||(34697380-34697445)
chr1 (446-511)||(35211170-35211235)
chr1 (458-531)||(40288487-40288560)
chr1 (446-531)||(44969689-44969774)
chr1 (470-531)||(48761201-48761262)
chr1 (479-531)||(47312930-47312982)
chr1 (447-519)||(50503360-50503432)
[»] chr5 (51 HSPs)
chr5 (19-140)||(4416248-4416369)
chr5 (446-531)||(5731917-5732002)
chr5 (15-140)||(34874983-34875107)
chr5 (446-531)||(9805029-9805114)
chr5 (446-531)||(42086352-42086437)
chr5 (74-140)||(27895376-27895442)
chr5 (44-140)||(6048707-6048804)
chr5 (446-523)||(39099776-39099853)
chr5 (447-523)||(8513552-8513628)
chr5 (447-531)||(40117440-40117524)
chr5 (26-140)||(4922705-4922819)
chr5 (469-523)||(14974344-14974398)
chr5 (449-531)||(42291505-42291587)
chr5 (446-523)||(1538464-1538541)
chr5 (448-521)||(2485231-2485304)
chr5 (446-523)||(13664293-13664370)
chr5 (446-523)||(19572757-19572834)
chr5 (446-511)||(40773318-40773383)
chr5 (446-531)||(41163457-41163542)
chr5 (448-528)||(14588616-14588696)
chr5 (26-140)||(20209274-20209389)
chr5 (447-519)||(20255406-20255478)
chr5 (447-531)||(23383682-23383766)
chr5 (472-531)||(7308387-7308446)
chr5 (36-119)||(8891988-8892071)
chr5 (447-530)||(14728109-14728192)
chr5 (448-511)||(27648424-27648487)
chr5 (446-523)||(4016252-4016329)
chr5 (447-508)||(28857194-28857255)
chr5 (446-523)||(42861215-42861292)
chr5 (463-531)||(12081933-12082001)
chr5 (464-531)||(9168268-9168335)
chr5 (449-520)||(20525874-20525945)
chr5 (448-531)||(25417182-25417265)
chr5 (447-498)||(28857007-28857058)
chr5 (446-531)||(9812897-9812982)
chr5 (446-531)||(30349604-30349689)
chr5 (446-531)||(38897716-38897801)
chr5 (447-528)||(43399156-43399237)
chr5 (447-531)||(20682615-20682699)
chr5 (36-119)||(7001327-7001410)
chr5 (472-531)||(11845824-11845883)
chr5 (469-531)||(3653934-3653996)
chr5 (449-531)||(19839352-19839434)
chr5 (473-531)||(24463910-24463968)
chr5 (448-498)||(25950593-25950643)
chr5 (473-531)||(37263265-37263323)
chr5 (446-531)||(12705039-12705124)
chr5 (446-523)||(12766164-12766241)
chr5 (470-519)||(35561839-35561888)
chr5 (77-140)||(40089807-40089872)
[»] chr6 (34 HSPs)
chr6 (19-140)||(17079739-17079860)
chr6 (25-140)||(6831485-6831600)
chr6 (19-118)||(9199800-9199898)
chr6 (446-531)||(21898676-21898761)
chr6 (447-531)||(3601112-3601196)
chr6 (446-523)||(6606094-6606171)
chr6 (446-531)||(9633622-9633707)
chr6 (447-531)||(34954617-34954701)
chr6 (447-529)||(31129207-31129289)
chr6 (446-531)||(12606458-12606543)
chr6 (446-531)||(30788850-30788935)
chr6 (447-523)||(5253221-5253297)
chr6 (448-531)||(29333138-29333221)
chr6 (446-524)||(14783417-14783495)
chr6 (446-531)||(3587942-3588027)
chr6 (446-531)||(13468961-13469046)
chr6 (446-523)||(19089534-19089611)
chr6 (446-531)||(29444762-29444847)
chr6 (61-113)||(11061444-11061496)
chr6 (447-523)||(13036002-13036078)
chr6 (447-519)||(30410485-30410557)
chr6 (446-531)||(13584443-13584532)
chr6 (15-113)||(26526028-26526127)
chr6 (31-140)||(17874361-17874471)
chr6 (482-531)||(14107391-14107440)
chr6 (472-531)||(8888910-8888969)
chr6 (472-531)||(17114920-17114979)
chr6 (449-515)||(8149797-8149863)
chr6 (446-512)||(14326044-14326110)
chr6 (446-512)||(14419054-14419120)
chr6 (446-531)||(8611971-8612056)
chr6 (446-523)||(8932697-8932774)
chr6 (446-523)||(8944163-8944240)
chr6 (446-531)||(12635842-12635927)
[»] scaffold0481 (1 HSPs)
scaffold0481 (15-140)||(1344-1469)
[»] scaffold0007 (1 HSPs)
scaffold0007 (19-140)||(181600-181721)
[»] scaffold0291 (1 HSPs)
scaffold0291 (447-523)||(6890-6966)
[»] scaffold0009 (1 HSPs)
scaffold0009 (448-523)||(42831-42906)
[»] scaffold0384 (1 HSPs)
scaffold0384 (453-530)||(6000-6077)
[»] scaffold0308 (1 HSPs)
scaffold0308 (36-140)||(11550-11655)
[»] scaffold0227 (1 HSPs)
scaffold0227 (63-140)||(8380-8457)
[»] scaffold0016 (1 HSPs)
scaffold0016 (447-531)||(8699-8783)
[»] scaffold0002 (2 HSPs)
scaffold0002 (447-511)||(617-681)
scaffold0002 (446-531)||(319449-319534)
[»] scaffold0170 (1 HSPs)
scaffold0170 (469-531)||(9872-9934)
[»] scaffold0010 (1 HSPs)
scaffold0010 (446-531)||(155708-155793)
[»] scaffold0765 (1 HSPs)
scaffold0765 (32-140)||(1348-1455)
[»] scaffold0316 (1 HSPs)
scaffold0316 (447-531)||(1612-1696)
[»] scaffold0005 (1 HSPs)
scaffold0005 (448-523)||(250024-250099)
[»] scaffold0011 (2 HSPs)
scaffold0011 (457-523)||(186552-186618)
scaffold0011 (448-518)||(224357-224427)
[»] scaffold0223 (1 HSPs)
scaffold0223 (448-531)||(16906-16989)
[»] scaffold0086 (1 HSPs)
scaffold0086 (448-531)||(26210-26293)
[»] scaffold0179 (1 HSPs)
scaffold0179 (26-113)||(7024-7113)
[»] scaffold0029 (1 HSPs)
scaffold0029 (446-511)||(41091-41156)
[»] scaffold0004 (1 HSPs)
scaffold0004 (446-523)||(7832-7909)
[»] scaffold0001 (1 HSPs)
scaffold0001 (447-531)||(65150-65234)


Alignment Details
Target: chr3 (Bit Score: 229; Significance: 1e-126; HSPs: 60)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 157 - 529
Target Start/End: Complemental strand, 23511969 - 23511593
Alignment:
Q  157 tagtgtcctctaaaattagaaaaggaaacgaattccctttagtaagagtgtgacatagtcactacttatcaaaatcaacgatggagatcgcttataactg 256  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  23511969 tagtgtcctctaaaattagaaaaggaaacgaattccctttagtaacagtgtgacatagtcactacctatcaaaatcaacgatggagatcgcttataactg 23511870  T
Q  257 attttttgaatgtgtaatttgagatgttttgatcttaaattaacaaccaagat----tgtctaccacgtgtaaatatatgattcctctatttcaccgcca 352  Q
    |||||||||||||||||||||||||| ||||||||||||||||| ||||||||    |||||||||||||||||||||||||||||||||||||||||||    
T  23511869 attttttgaatgtgtaatttgagatg-tttgatcttaaattaacgaccaagattgtctgtctaccacgtgtaaatatatgattcctctatttcaccgcca 23511771  T
Q  353 ttctgctttagctttataaataggataggatagggcaactaacctagaaagtgaatcaataatgtatgcaagatgttgttgcatannnnnnnng-gcttt 451  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||||||||| || ||||||||||||||||| | ||||||||         | |||||    
T  23511770 ttctgctttagctttatatataggataggatagggcaagtaacctagaaagttaagcaataatgtatgcaagacgatgttgcattttttttttgtgcttt 23511671  T
Q  452 cgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttg 529  Q
    |||| |||||  |||| || |||||||| |||| ||||||| |||||  ||||||||||| ||||||| ||| |||||    
T  23511670 cgcaccggttttcgacccatcaaaggtggacgattaatccgactcatgcgtagaggcatgcgcactggtcaaacgttg 23511593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 19 - 140
Target Start/End: Original strand, 33121865 - 33121986
Alignment:
Q  19 catcacgtaatggtttgttttggttgtttgtatgattctaaatttgtagagtagctcttttggcacaccttgtgctagaagagttgcttttggtgattaa 118  Q
    ||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| |||||||| ||| ||||||||||||||||||||||||    
T  33121865 catcacgtaatggtttgttttggttgtttgtatgactctatatttgtagagtagctcttttgacacaccttatgccagaagagttgcttttggtgattaa 33121964  T
Q  119 tttaatttcatttttgattgtt 140  Q
    | ||||| ||||||||||||||    
T  33121965 tataattccatttttgattgtt 33121986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 19 - 133
Target Start/End: Complemental strand, 36635030 - 36634916
Alignment:
Q  19 catcacgtaatggtttgttttggttgtttgtatgattctaaatttgtagagtagctcttttggcacaccttgtgctagaagagttgcttttggtgattaa 118  Q
    ||||||||||||||||||||||||||||||||||| ||||  |||||||||||| |||| ||||||||||| | ||| ||||||||||||||||||||||    
T  36635030 catcacgtaatggtttgttttggttgtttgtatgactctatgtttgtagagtagttcttctggcacaccttatactaaaagagttgcttttggtgattaa 36634931  T
Q  119 tttaatttcattttt 133  Q
    | ||||| |||||||    
T  36634930 tataattccattttt 36634916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 19 - 140
Target Start/End: Complemental strand, 11639558 - 11639437
Alignment:
Q  19 catcacgtaatggtttgttttggttgtttgtatgattctaaatttgtagagtagctcttttggcacaccttgtgctagaagagttgcttttggtgattaa 118  Q
    |||| ||||||||||||||||||||| |||||||| |||  ||||||| ||||| |||||||||||||||||||| |||||||||| |||||||| ||||    
T  11639558 catcgcgtaatggtttgttttggttggttgtatgactctgtatttgtaaagtagttcttttggcacaccttgtgcaagaagagttgattttggtggttaa 11639459  T
Q  119 tttaatttcatttttgattgtt 140  Q
    | ||||| ||||||||||||||    
T  11639458 tataattccatttttgattgtt 11639437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 19 - 140
Target Start/End: Original strand, 8695439 - 8695560
Alignment:
Q  19 catcacgtaatggtttgttttggttgtttgtatgattctaaatttgtagagtagctcttttggcacaccttgtgctagaagagttgcttttggtgattaa 118  Q
    |||| ||||||||||||||||||||| |||||| | |||  ||||||| ||||| |||| ||||||||||||||||||||||||||||||||||| ||||    
T  8695439 catcgcgtaatggtttgttttggttggttgtataactctgtatttgtaaagtagttcttgtggcacaccttgtgctagaagagttgcttttggtggttaa 8695538  T
Q  119 tttaatttcatttttgattgtt 140  Q
    | |||||  ||||||| |||||    
T  8695539 tataattatatttttgtttgtt 8695560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 19 - 140
Target Start/End: Original strand, 9047326 - 9047447
Alignment:
Q  19 catcacgtaatggtttgttttggttgtttgtatgattctaaatttgtagagtagctcttttggcacaccttgtgctagaagagttgcttttggtgattaa 118  Q
    |||| ||||||||||||||||||||| |||||| | |||  ||||||| ||||| |||| ||||||||||||||||||||||||||||||||||| ||||    
T  9047326 catcgcgtaatggtttgttttggttggttgtataactctgtatttgtaaagtagttcttgtggcacaccttgtgctagaagagttgcttttggtggttaa 9047425  T
Q  119 tttaatttcatttttgattgtt 140  Q
    | |||||  ||||||| |||||    
T  9047426 tataattatatttttgtttgtt 9047447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 61 - 140
Target Start/End: Complemental strand, 1764682 - 1764603
Alignment:
Q  61 tttgtagagtagctcttttggcacaccttgtgctagaagagttgcttttggtgattaatttaatttcatttttgattgtt 140  Q
    ||||| |||||| |||||||||||||||| || |||||||||||||||||||||||||| ||||||||||||||||||||    
T  1764682 tttgttgagtagttcttttggcacaccttatgttagaagagttgcttttggtgattaatataatttcatttttgattgtt 1764603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 15 - 140
Target Start/End: Original strand, 25341878 - 25342004
Alignment:
Q  15 tggacatcacgtaatggtttgttttggttgtttgtatgattctaaatttgtagagtagctcttttggcacaccttgtgctagaagagttgcttttggtga 114  Q
    |||||||| | ||||| |||||||||||| ||||||||| ||||  |||||| ||||| |||||||||||||||| |||||||   |||||||||||||     
T  25341878 tggacatcgcttaatgatttgttttggttatttgtatgactctatgtttgtaaagtagttcttttggcacaccttatgctagagtggttgcttttggtgg 25341977  T
Q  115 ttaattta-atttcatttttgattgtt 140  Q
    ||||| || ||||||||||||||||||    
T  25341978 ttaatatatatttcatttttgattgtt 25342004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 62 - 140
Target Start/End: Original strand, 32233670 - 32233749
Alignment:
Q  62 ttgtagagtagctcttttggcacaccttgtgctagaagagttgcttttggtgattaat-ttaatttcatttttgattgtt 140  Q
    ||||||||||| |||||||||||||||||||||||| ||||||||||||||| ||||| | |||||||||||| ||||||    
T  32233670 ttgtagagtagttcttttggcacaccttgtgctagaggagttgcttttggtggttaatataaatttcattttttattgtt 32233749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 448 - 531
Target Start/End: Complemental strand, 54261333 - 54261250
Alignment:
Q  448 ctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    |||||||| ||||| ||||| ||| ||||||||||||||||||||||||||  ||||||||||| ||||||||||| |||||||    
T  54261333 ctttcgcaccggtttccgacccactaaaggtgaacgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgtt 54261250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 448 - 523
Target Start/End: Complemental strand, 45877561 - 45877486
Alignment:
Q  448 ctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaa 523  Q
    |||||||| ||||| ||||| || ||| |||||||||||||||||||||||  |||||||||||||||||||||||    
T  45877561 ctttcgcaccggtttccgacccatcaatggtgaacgactaatccggctcatgcgtagaggcatgtgcactggccaa 45877486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 446 - 523
Target Start/End: Complemental strand, 26043921 - 26043844
Alignment:
Q  446 ggctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaa 523  Q
    |||||||||  ||||| | |||||||||||||||| |||||||||||||||||  ||||||||||| |||||||||||    
T  26043921 ggctttcgccccggtttctgactcaccaaaggtgagcgactaatccggctcatgcgtagaggcatgcgcactggccaa 26043844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 446 - 523
Target Start/End: Complemental strand, 29128028 - 29127951
Alignment:
Q  446 ggctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaa 523  Q
    |||||||||||||||| ||||| |||||||||||  |||||||||||||||||  ||||||||||| |||||| ||||    
T  29128028 ggctttcgcatcggtttccgacccaccaaaggtgggcgactaatccggctcatgcgtagaggcatgcgcactgaccaa 29127951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 446 - 531
Target Start/End: Complemental strand, 47219253 - 47219168
Alignment:
Q  446 ggctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    |||||||||| ||||| ||||| || |||||||| ||||||||||||||||||  ||||||||||| ||||| ||||| |||||||    
T  47219253 ggctttcgcaccggtttccgacccatcaaaggtggacgactaatccggctcatgcgtagaggcatgcgcactagccaagcgttgtt 47219168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 447 - 531
Target Start/End: Original strand, 55069678 - 55069762
Alignment:
Q  447 gctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    ||||| ||| ||||| ||||| |||||||||||| ||| ||||||||||| |  ||||||||||||||||||||||| |||||||    
T  55069678 gcttttgcaccggtttccgacccaccaaaggtgagcgattaatccggctcgtgcgtagaggcatgtgcactggccaaacgttgtt 55069762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 15 - 140
Target Start/End: Complemental strand, 26845467 - 26845341
Alignment:
Q  15 tggacatcacgtaatggtttgttttggttgtttgtat-gattctaaatttgtagagtagctcttttggcacaccttgtgctagaagagttgcttttggtg 113  Q
    |||||||| | ||||||||||| |||||||||||| | || |||   |||||| ||||  |||||| ||||||||||||||||| |||||||||||||||    
T  26845467 tggacatcgcttaatggtttgtattggttgtttgttttgactctgtttttgtaaagtaattcttttagcacaccttgtgctagaggagttgcttttggtg 26845368  T
Q  114 attaattta-atttcatttttgattgtt 140  Q
     ||||| || ||| ||||||||||||||    
T  26845367 -ttaatatatattccatttttgattgtt 26845341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 449 - 523
Target Start/End: Original strand, 3507534 - 3507608
Alignment:
Q  449 tttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaa 523  Q
    ||||||| ||||| ||||| |||||||||||| ||||||||||||||| |  ||||||||||| |||||||||||    
T  3507534 tttcgcaccggtttccgacccaccaaaggtgagcgactaatccggctcgtgcgtagaggcatgcgcactggccaa 3507608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 36 - 140
Target Start/End: Complemental strand, 47536845 - 47536740
Alignment:
Q  36 ttttggttgtttgtatgattctaaatttgtagagtagctcttttggcacaccttgtgctagaagagttgcttttggtgattaat-ttaatttcatttttg 134  Q
    ||||| |||||||||||| |||   ||||||||||||||||||||||||| ||||||||| | ||| || |||||||| ||||| | |||| |||||||     
T  47536845 ttttgtttgtttgtatgactctgtgtttgtagagtagctcttttggcacatcttgtgctacaggagctgtttttggtggttaatataaattccatttttt 47536746  T
Q  135 attgtt 140  Q
    ||||||    
T  47536745 attgtt 47536740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 446 - 519
Target Start/End: Original strand, 49021201 - 49021274
Alignment:
Q  446 ggctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactgg 519  Q
    |||||||||| ||||| ||||| |||||| |||| ||||||||||||||||||  ||||||||||| |||||||    
T  49021201 ggctttcgcaccggtttccgacccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcactgg 49021274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 448 - 523
Target Start/End: Complemental strand, 35316063 - 35315988
Alignment:
Q  448 ctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaa 523  Q
    |||||||||||||| ||||| ||||||| |||  |||||||||| ||||||  ||||||||||| |||||||||||    
T  35316063 ctttcgcatcggtttccgacccaccaaaagtgggcgactaatccagctcatgcgtagaggcatgcgcactggccaa 35315988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 446 - 521
Target Start/End: Original strand, 45402349 - 45402424
Alignment:
Q  446 ggctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggcc 521  Q
    ||||| |||||| ||| ||||| ||| ||||||||||||||||||||||||||  ||||||||||| |||| ||||    
T  45402349 ggcttgcgcatcagtttccgacccactaaaggtgaacgactaatccggctcatgcgtagaggcatgcgcacaggcc 45402424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 448 - 523
Target Start/End: Complemental strand, 47471938 - 47471863
Alignment:
Q  448 ctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaa 523  Q
    |||||||||||||| ||||| ||||||||||| ||||||||| ||||||||  ||||| ||||| ||||| |||||    
T  47471938 ctttcgcatcggtttccgacccaccaaaggtggacgactaattcggctcatgcgtagaagcatgcgcactagccaa 47471863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 446 - 523
Target Start/End: Original strand, 3136692 - 3136769
Alignment:
Q  446 ggctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaa 523  Q
    |||||||||| ||||| |||||  |||||||||| |||||||||||| |||||  ||||||||||| |||||| ||||    
T  3136692 ggctttcgcaccggtttccgaccaaccaaaggtggacgactaatccgactcatgcgtagaggcatgcgcactgcccaa 3136769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 446 - 511
Target Start/End: Original strand, 7310701 - 7310766
Alignment:
Q  446 ggctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatg 511  Q
    |||||||||||||||| ||||| |||||||| ||| ||||||||||||||| |  |||||||||||    
T  7310701 ggctttcgcatcggtttccgacccaccaaagatgagcgactaatccggctcgtgcgtagaggcatg 7310766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 446 - 531
Target Start/End: Complemental strand, 15320295 - 15320210
Alignment:
Q  446 ggctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    |||||||||| ||||| | ||| |||||||||||  ||||||||||||||| |  |||||||||||  |||||||||||| |||||    
T  15320295 ggctttcgcaccggtttctgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcacactggccaatcattgtt 15320210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 446 - 531
Target Start/End: Original strand, 24506646 - 24506731
Alignment:
Q  446 ggctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    |||||| ||| ||||| ||||| |||||| ||||| ||||||||| | |||||  ||||||||||||||||||| ||| |||||||    
T  24506646 ggcttttgcaccggtttccgacccaccaatggtgagcgactaatctgactcatgcgtagaggcatgtgcactggtcaagcgttgtt 24506731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 446 - 523
Target Start/End: Complemental strand, 25295069 - 25294992
Alignment:
Q  446 ggctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaa 523  Q
    |||||||||| ||||| || || |||||| |||| ||||||||||||||||||   |||||||||| |||||||||||    
T  25295069 ggctttcgcaccggtttccaacccaccaatggtggacgactaatccggctcatgcatagaggcatgcgcactggccaa 25294992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 446 - 531
Target Start/End: Original strand, 28572209 - 28572294
Alignment:
Q  446 ggctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    |||||||||| ||||| ||||| |||||||||||  ||||||||||||||| |  |||||||||||   ||||||||| |||||||    
T  28572209 ggctttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcatactggccaagcgttgtt 28572294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 470 - 531
Target Start/End: Original strand, 32873571 - 32873632
Alignment:
Q  470 accaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    ||||||||||  ||||||||| |||||||| ||||||||||||||||||| ||| |||||||    
T  32873571 accaaaggtgggcgactaatctggctcatacgtagaggcatgtgcactggtcaagcgttgtt 32873632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 470 - 531
Target Start/End: Original strand, 41630534 - 41630595
Alignment:
Q  470 accaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    ||||||||||  ||||||||||||||||| |||||||||||| ||||||| ||| |||||||    
T  41630534 accaaaggtgggcgactaatccggctcatgtgtagaggcatgcgcactgggcaagcgttgtt 41630595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 446 - 523
Target Start/End: Original strand, 47749103 - 47749180
Alignment:
Q  446 ggctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaa 523  Q
    |||||||||||||||| |||||  ||||||||||  |||||||| |||||| |  ||||||||||| |||||||||||    
T  47749103 ggctttcgcatcggtttccgacctaccaaaggtgggcgactaattcggctcgtgcgtagaggcatgcgcactggccaa 47749180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 448 - 532
Target Start/End: Original strand, 29762155 - 29762239
Alignment:
Q  448 ctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgttg 532  Q
    |||||||| ||||| ||||| |||||| |||| ||||||||||| ||||||   |||||||||| |||||||||||  |||||||    
T  29762155 ctttcgcaccggtttccgacccaccaatggtggacgactaatccagctcatgcatagaggcatgcgcactggccaagtgttgttg 29762239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 61 - 140
Target Start/End: Original strand, 32093502 - 32093582
Alignment:
Q  61 tttgtagagtagctcttttggcacaccttgtgctagaagagttgcttttggtgattaattta-atttcatttttgattgtt 140  Q
    |||||||||||||||||||||||| |||||| ||| | ||| ||||||||||| ||||| || ||  ||||||||||||||    
T  32093502 tttgtagagtagctcttttggcacgccttgtactataggagctgcttttggtggttaatatatatcccatttttgattgtt 32093582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 471 - 523
Target Start/End: Original strand, 47303512 - 47303564
Alignment:
Q  471 ccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaa 523  Q
    ||||||||  |||||||||||||||||| ||||||||||||||||||| ||||    
T  47303512 ccaaaggttgacgactaatccggctcatgtgtagaggcatgtgcactgaccaa 47303564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 26 - 140
Target Start/End: Complemental strand, 19221712 - 19221599
Alignment:
Q  26 taatggtttgttttggttgtttgtatgattctaaattt-gtagagtagctcttttggcacaccttgtgctagaagagttgcttttggtgattaattta-a 123  Q
    |||||||||||| ||||||||||||||| ||    ||| ||| |||||   |||||||||||||||||||||| ||||||||||||||  ||||| || |    
T  19221712 taatggtttgttatggttgtttgtatgactcggtgttttgtaaagtag---ttttggcacaccttgtgctagaggagttgcttttggttgttaatatata 19221616  T
Q  124 tttcatttttgattgtt 140  Q
    || ||||||| ||||||    
T  19221615 ttccattttttattgtt 19221599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 469 - 523
Target Start/End: Complemental strand, 49198437 - 49198383
Alignment:
Q  469 caccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaa 523  Q
    |||||| |||| ||||||||||||||||||  ||||||||||| |||||||||||    
T  49198437 caccaatggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaa 49198383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 449 - 523
Target Start/End: Complemental strand, 53649833 - 53649759
Alignment:
Q  449 tttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaa 523  Q
    ||||||| ||||| ||||  || |||||||||||||||||||||||||||  |||||| || | |||||||||||    
T  53649833 tttcgcaccggtttccgatccatcaaaggtgaacgactaatccggctcatgcgtagagacaggcgcactggccaa 53649759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 482 - 531
Target Start/End: Complemental strand, 6462485 - 6462436
Alignment:
Q  482 cgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    |||||||||||||||||  ||||||||||| ||||||||||| |||||||    
T  6462485 cgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgtt 6462436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 446 - 531
Target Start/End: Complemental strand, 13894035 - 13893950
Alignment:
Q  446 ggctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    |||||||||| |||||  |||  |||||||||||  ||||||||||||||| | |||||||||||| ||| || |||| |||||||    
T  13894035 ggctttcgcaccggttttcgatccaccaaaggtgggcgactaatccggctcgtgtgtagaggcatgcgcattgaccaagcgttgtt 13893950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 446 - 523
Target Start/End: Complemental strand, 29136022 - 29135945
Alignment:
Q  446 ggctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaa 523  Q
    |||||||| | ||||| || || |||||| |||| | ||||||||||||||||  ||||||||||| |||||||||||    
T  29136022 ggctttcgtaccggtttccaacccaccaatggtggaagactaatccggctcatgcgtagaggcatgcgcactggccaa 29135945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 446 - 511
Target Start/End: Complemental strand, 44064653 - 44064588
Alignment:
Q  446 ggctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatg 511  Q
    |||||| ||| ||||| ||||| |||||||||||| |||||||||||| ||||  |||||||||||    
T  44064653 ggcttttgcaccggtttccgacccaccaaaggtgagcgactaatccggttcatgcgtagaggcatg 44064588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 446 - 523
Target Start/End: Original strand, 51060279 - 51060356
Alignment:
Q  446 ggctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaa 523  Q
    |||||||||| ||||| ||||| |||||| |||| ||||||||||| | ||||  ||||||||||| |||||| ||||    
T  51060279 ggctttcgcaccggtttccgacccaccaatggtggacgactaatccagttcatgcgtagaggcatgcgcactgaccaa 51060356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 447 - 523
Target Start/End: Complemental strand, 7328951 - 7328876
Alignment:
Q  447 gctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaa 523  Q
    ||||||||| |||||  |||| |||||||||||  |||||||||||||||||  ||| ||||||| |||||||||||    
T  7328951 gctttcgcaccggttttcgacccaccaaaggtgggcgactaatccggctcatgcgta-aggcatgcgcactggccaa 7328876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 450 - 498
Target Start/End: Original strand, 8683242 - 8683290
Alignment:
Q  450 ttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcat 498  Q
    ||||||| |||| ||||| ||||||||||| ||||||||||||||||||    
T  8683242 ttcgcataggtttccgacccaccaaaggtggacgactaatccggctcat 8683290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 452 - 531
Target Start/End: Complemental strand, 10040659 - 10040580
Alignment:
Q  452 cgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    |||| ||||| || || ||||||||||| ||||| | |||||||| |  ||||||||||| ||||||||||| |||||||    
T  10040659 cgcaccggtttccaacccaccaaaggtggacgaccattccggctcgtgcgtagaggcatgcgcactggccaagcgttgtt 10040580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 472 - 531
Target Start/End: Complemental strand, 33251745 - 33251686
Alignment:
Q  472 caaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    |||| ||| ||||||||||||||||||  |||||||||||  |||||||||| |||||||    
T  33251745 caaatgtggacgactaatccggctcatgcgtagaggcatgcacactggccaaacgttgtt 33251686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 476 - 531
Target Start/End: Original strand, 42412802 - 42412857
Alignment:
Q  476 ggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    ||||| |||||||||||||||||  ||||||||||| ||||| ||||| |||||||    
T  42412802 ggtgagcgactaatccggctcatgcgtagaggcatgggcacttgccaagcgttgtt 42412857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 74 - 140
Target Start/End: Original strand, 49500936 - 49501003
Alignment:
Q  74 tcttttggcacaccttgtgctagaagagttgcttttggtgattaattta-atttcatttttgattgtt 140  Q
    |||||||||||| ||||||||||| ||||||||||| ||| ||||| || ||| |||||||| |||||    
T  49500936 tcttttggcacatcttgtgctagaggagttgctttttgtggttaatatatattccatttttgcttgtt 49501003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 446 - 496
Target Start/End: Original strand, 36043672 - 36043722
Alignment:
Q  446 ggctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctc 496  Q
    |||||||||| ||||| ||||| |||||||||||  |||||||||||||||    
T  36043672 ggctttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctc 36043722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 446 - 519
Target Start/End: Complemental strand, 928709 - 928636
Alignment:
Q  446 ggctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactgg 519  Q
    |||||||||| || ||  |||||||||||||||| | |||||||||||||| |  |||| |||||| |||||||    
T  928709 ggctttcgcaccgattttcgactcaccaaaggtggatgactaatccggctcgtgcgtagcggcatgcgcactgg 928636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 470 - 531
Target Start/End: Complemental strand, 3755655 - 3755594
Alignment:
Q  470 accaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    |||||||||  ||||||||||||||||||  |||||| |||| ||||||| ||| |||||||    
T  3755655 accaaaggtagacgactaatccggctcatgcgtagagacatgcgcactggtcaaacgttgtt 3755594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 446 - 531
Target Start/End: Original strand, 26361965 - 26362050
Alignment:
Q  446 ggctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    ||||||| || ||||| ||||| || ||||||||  ||||||||||||||| |  |||||||||||  ||||| |||| |||||||    
T  26361965 ggctttcacaccggtttccgacccatcaaaggtgtgcgactaatccggctcgtgcgtagaggcatgcacactgaccaaacgttgtt 26362050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 446 - 515
Target Start/End: Original strand, 29195317 - 29195386
Alignment:
Q  446 ggctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgca 515  Q
    |||||||| | ||||| || || ||| ||||||| |||||||||| || |||| ||||||||||||||||    
T  29195317 ggctttcgtaccggtttccaacccactaaaggtggacgactaatctggttcatgtgtagaggcatgtgca 29195386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 482 - 531
Target Start/End: Complemental strand, 39849144 - 39849095
Alignment:
Q  482 cgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    |||||||||||||||||  |||||||||||  |||||||||| |||||||    
T  39849144 cgactaatccggctcatgcgtagaggcatgcacactggccaagcgttgtt 39849095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 446 - 523
Target Start/End: Complemental strand, 54237557 - 54237480
Alignment:
Q  446 ggctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaa 523  Q
    |||||||||| ||||| ||||| ||| || |||| |||||| |||||||||||  |||||| |||| |||||| ||||    
T  54237557 ggctttcgcaccggtttccgacccactaatggtggacgacttatccggctcatgcgtagagacatgcgcactgaccaa 54237480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 448 - 496
Target Start/End: Complemental strand, 19147068 - 19147020
Alignment:
Q  448 ctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctc 496  Q
    |||||||| ||||| ||||| ||||||||||| ||||||||||| ||||    
T  19147068 ctttcgcaccggtttccgacccaccaaaggtggacgactaatccagctc 19147020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 463 - 523
Target Start/End: Original strand, 30767262 - 30767322
Alignment:
Q  463 ccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaa 523  Q
    ||||| |||||||||||  ||||||||||||||| |  |||||||||||  ||||||||||    
T  30767262 ccgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcacactggccaa 30767322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 447 - 531
Target Start/End: Complemental strand, 31072986 - 31072902
Alignment:
Q  447 gctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    ||||||||| ||||| || ||  |||||||||| |||| ||||| || || |  |||||||||||||||||| |||| |||||||    
T  31072986 gctttcgcaccggtttccaacctaccaaaggtggacgattaatctgggtcgtgcgtagaggcatgtgcactgaccaagcgttgtt 31072902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 447 - 531
Target Start/End: Complemental strand, 48342128 - 48342044
Alignment:
Q  447 gctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    ||||||||| | ||| ||||  |||||||| || |||||||||| || ||||  ||||||||||| ||||| ||||| |||||||    
T  48342128 gctttcgcacctgtttccgatccaccaaagatggacgactaatctggttcatgcgtagaggcatgcgcactagccaagcgttgtt 48342044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 447 - 523
Target Start/End: Original strand, 52168569 - 52168645
Alignment:
Q  447 gctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaa 523  Q
    ||||| |||||||||  |||| || |||  |||||||||||||||||||||| ||| | |||||| ||| |||||||    
T  52168569 gctttagcatcggttttcgacccatcaattgtgaacgactaatccggctcatgtgttggggcatgcgcattggccaa 52168645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 102; Significance: 2e-50; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 19 - 140
Target Start/End: Original strand, 10583963 - 10584084
Alignment:
Q  19 catcacgtaatggtttgttttggttgtttgtatgattctaaatttgtagagtagctcttttggcacaccttgtgctagaagagttgcttttggtgattaa 118  Q
    |||||||||||| |||||||| ||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10583963 catcacgtaatgatttgttttagttgtttgtatgactttaaatttgtagagtagctcttttggcacaccttgtgctagaagagttgcttttggtgattaa 10584062  T
Q  119 tttaatttcatttttgattgtt 140  Q
    | ||||||||||||||||||||    
T  10584063 tataatttcatttttgattgtt 10584084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 19 - 140
Target Start/End: Original strand, 8446718 - 8446839
Alignment:
Q  19 catcacgtaatggtttgttttggttgtttgtatgattctaaatttgtagagtagctcttttggcacaccttgtgctagaagagttgcttttggtgattaa 118  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||| |||||||||||||||| |||||||    
T  8446718 catcacgtaatggtttgttttggttgtttgtatgactctaaatttgtagagtagctctttcggcacaccttgtgccagaagagttgcttttgatgattaa 8446817  T
Q  119 tttaatttcatttttgattgtt 140  Q
    | ||||| ||||||||||||||    
T  8446818 tataattccatttttgattgtt 8446839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 446 - 531
Target Start/End: Complemental strand, 10927719 - 10927634
Alignment:
Q  446 ggctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    |||||||||||||||| ||||| ||| ||||||||||||||||||||||||||  ||||||||||| ||||||||||| |||||||    
T  10927719 ggctttcgcatcggtttccgacccactaaaggtgaacgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgtt 10927634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 26 - 132
Target Start/End: Original strand, 45256382 - 45256487
Alignment:
Q  26 taatggtttgttttggttgtttgtatgattctaaatttgtagagtagctcttttggcacaccttgtgctagaagagttgcttttggtgattaattta-at 124  Q
    |||||||||||||||||||||||||||| |||   |||||  ||||| |||||||||||||||||||||||| |||||| |||||||| ||||| || ||    
T  45256382 taatggtttgttttggttgtttgtatgactctg--tttgtgaagtagttcttttggcacaccttgtgctagaggagttgtttttggtggttaatatatat 45256479  T
Q  125 ttcatttt 132  Q
    ||||||||    
T  45256480 ttcatttt 45256487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 15 - 140
Target Start/End: Original strand, 29470742 - 29470866
Alignment:
Q  15 tggacatcacgtaatggtttgttttggttgtttgtatgattctaaatttgtagagtagctcttttggcacaccttgtgctagaagagttgcttttggtga 114  Q
    |||||||| ||| |||||||  |||| | |||||||||| |||   ||||||||||||||||||||||||||||| ||||| | ||| |||||||||||     
T  29470742 tggacatcgcgtgatggttt--tttgttcgtttgtatgactctgtgtttgtagagtagctcttttggcacaccttatgctacaggagctgcttttggtgg 29470839  T
Q  115 ttaattta-atttcatttttgattgtt 140  Q
    ||||| || ||||||||||| ||||||    
T  29470840 ttaatatatatttcattttttattgtt 29470866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 449 - 531
Target Start/End: Original strand, 4479296 - 4479378
Alignment:
Q  449 tttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    ||||||| ||||| ||||| ||||||||||| ||||||||||| ||||||  ||||||||||| ||||||||||| |||||||    
T  4479296 tttcgcaccggtttccgacccaccaaaggtggacgactaatccagctcatgcgtagaggcatgcgcactggccaagcgttgtt 4479378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 446 - 531
Target Start/End: Complemental strand, 6100585 - 6100500
Alignment:
Q  446 ggctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    |||||||||| |||||  |||| ||| ||||||||||||||||||||||||||  |||| |||||| ||||||||||| |||||||    
T  6100585 ggctttcgcagcggttttcgacccactaaaggtgaacgactaatccggctcatgcgtagtggcatgcgcactggccaagcgttgtt 6100500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 36 - 140
Target Start/End: Original strand, 31082172 - 31082277
Alignment:
Q  36 ttttggttgtttgtatgattctaaatttgtagagtagctcttttggcacaccttgtgctagaagagttgcttttggtgattaat-ttaatttcatttttg 134  Q
    ||||| |||||||||||| |||   ||||||||||||||||||||||||||||||||||| |  ||||| |||||||| ||||| | |||| |||||||     
T  31082172 ttttgtttgtttgtatgactctgtgtttgtagagtagctcttttggcacaccttgtgctacataagttgtttttggtggttaatataaattccatttttt 31082271  T
Q  135 attgtt 140  Q
    ||||||    
T  31082272 attgtt 31082277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 447 - 531
Target Start/End: Complemental strand, 43027417 - 43027333
Alignment:
Q  447 gctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    ||||||||||||||| ||||| || ||||| || ||||||||||||||||||  ||||||||||| ||| ||| |||||||||||    
T  43027417 gctttcgcatcggtttccgacccatcaaagatggacgactaatccggctcatgcgtagaggcatgcgcattggacaatcgttgtt 43027333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 447 - 531
Target Start/End: Complemental strand, 43033013 - 43032929
Alignment:
Q  447 gctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    ||||||||| ||||| | ||| |||||||||||  ||||||||||||||| | |||||||||||| ||||||||||| |||||||    
T  43033013 gctttcgcaccggtttctgacccaccaaaggtgggcgactaatccggctcgtgtgtagaggcatgcgcactggccaagcgttgtt 43032929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 446 - 531
Target Start/End: Complemental strand, 26571037 - 26570952
Alignment:
Q  446 ggctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    ||||||| |||||||| |||||||| |||||||| ||||||||||||||||||  ||||| ||||   |||||||||| |||||||    
T  26571037 ggctttcacatcggtttccgactcatcaaaggtggacgactaatccggctcatgcgtagatgcatacacactggccaagcgttgtt 26570952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 447 - 531
Target Start/End: Complemental strand, 8141214 - 8141130
Alignment:
Q  447 gctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    ||||||||||||||| | ||| ||||||| ||| ||||||||| | ||||||  ||||||||||| ||||||||||| |||||||    
T  8141214 gctttcgcatcggtttctgacccaccaaatgtggacgactaattcagctcatgcgtagaggcatgcgcactggccaagcgttgtt 8141130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 61 - 140
Target Start/End: Complemental strand, 17658383 - 17658303
Alignment:
Q  61 tttgtagagtagctcttttggcacaccttgtgctagaagagttgcttttggtgattaattta-atttcatttttgattgtt 140  Q
    |||||| |||||||||||||||||||||||||||| | ||| ||||||||||| ||||| || ||| |||||||| |||||    
T  17658383 tttgtaaagtagctcttttggcacaccttgtgctacaggagctgcttttggtggttaatatatattccatttttggttgtt 17658303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 447 - 518
Target Start/End: Complemental strand, 45521280 - 45521209
Alignment:
Q  447 gctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactg 518  Q
    ||||||||| ||||| ||||| || ||||||||| |||||||||||||||||  ||||||||||| ||||||    
T  45521280 gctttcgcaccggtttccgacccatcaaaggtgagcgactaatccggctcatgcgtagaggcatgcgcactg 45521209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 447 - 531
Target Start/End: Original strand, 8997542 - 8997626
Alignment:
Q  447 gctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    ||||||||| ||||| ||||| |||||||| ||||||||||||| |||||||  ||| ||||||| | |||||| || |||||||    
T  8997542 gctttcgcaccggtttccgacccaccaaagatgaacgactaatctggctcatgcgtataggcatgcgaactggcgaaacgttgtt 8997626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 447 - 523
Target Start/End: Original strand, 9859993 - 9860069
Alignment:
Q  447 gctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaa 523  Q
    ||||| ||||||||| ||||  |||||| |||| |||||||||| ||||||| ||||||||||||  ||||||||||    
T  9859993 gcttttgcatcggtttccgatccaccaatggtggacgactaatctggctcatgtgtagaggcatgcacactggccaa 9860069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 464 - 531
Target Start/End: Complemental strand, 18374105 - 18374038
Alignment:
Q  464 cgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    |||| |||||||| || ||||||||||||||||||  ||||||||||| ||||||| ||| |||||||    
T  18374105 cgacccaccaaagttggacgactaatccggctcatgcgtagaggcatgcgcactggtcaagcgttgtt 18374038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 473 - 531
Target Start/End: Original strand, 1013001 - 1013059
Alignment:
Q  473 aaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    |||||||||||| |||| ||||||||  ||||||||||||| ||||||||| |||||||    
T  1013001 aaaggtgaacgattaattcggctcatgcgtagaggcatgtgtactggccaagcgttgtt 1013059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 449 - 523
Target Start/End: Original strand, 15884556 - 15884630
Alignment:
Q  449 tttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaa 523  Q
    ||||||| ||||| ||||| |||||||||||  ||||||||||||||| |  ||||||||||| ||||| |||||    
T  15884556 tttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcacttgccaa 15884630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 446 - 523
Target Start/End: Original strand, 2467115 - 2467192
Alignment:
Q  446 ggctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaa 523  Q
    |||||||||| ||||| ||||| ||||||  ||| ||||||||||||||||||   ||||| |||| |||||||||||    
T  2467115 ggctttcgcaccggtttccgacacaccaattgtggacgactaatccggctcatgcatagagacatgcgcactggccaa 2467192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 446 - 519
Target Start/End: Original strand, 10535401 - 10535474
Alignment:
Q  446 ggctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactgg 519  Q
    |||||||||| | ||| |||||| |||||||||||||||||||| ||||||||  || ||| |||| |||||||    
T  10535401 ggctttcgcaccagtttccgacttaccaaaggtgaacgactaattcggctcatgcgtggagacatgcgcactgg 10535474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 446 - 531
Target Start/End: Complemental strand, 14846688 - 14846603
Alignment:
Q  446 ggctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    |||||||||| || || ||||| ||||||||||| |||||| ||| | |||||  ||||||||||| |||||| |||||| |||||    
T  14846688 ggctttcgcaccgatttccgacccaccaaaggtggacgacttatctgactcatgcgtagaggcatgcgcactgaccaatcattgtt 14846603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 36 - 89
Target Start/End: Complemental strand, 23679740 - 23679687
Alignment:
Q  36 ttttggttgtttgtatgattctaaatttgtagagtagctcttttggcacacctt 89  Q
    ||||| |||||||||||| |||  ||||||||||||||| ||||||||||||||    
T  23679740 ttttgtttgtttgtatgactctgtatttgtagagtagctattttggcacacctt 23679687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 447 - 523
Target Start/End: Original strand, 16291201 - 16291277
Alignment:
Q  447 gctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaa 523  Q
    |||||| || |||||  |||| |||||||||||| |||||||||| ||||||   |||||||||||| |||||||||    
T  16291201 gctttcacaccggttttcgacccaccaaaggtgagcgactaatccagctcatgcatagaggcatgtgtactggccaa 16291277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 74 - 137
Target Start/End: Complemental strand, 26031028 - 26030965
Alignment:
Q  74 tcttttggcacaccttgtgctagaagagttgcttttggtgattaattta-atttcatttttgatt 137  Q
    |||||| ||||||||||||||||| ||||||||||||||| ||||| || ||| |||||||||||    
T  26031028 tcttttagcacaccttgtgctagaggagttgcttttggtg-ttaatatatattccatttttgatt 26030965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 463 - 519
Target Start/End: Complemental strand, 29933868 - 29933812
Alignment:
Q  463 ccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactgg 519  Q
    |||||||| |||||| |  |||||||||||||||||| |||||||||||| ||||||    
T  29933868 ccgactcatcaaaggggtgcgactaatccggctcatacgtagaggcatgtacactgg 29933812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 448 - 520
Target Start/End: Complemental strand, 36662515 - 36662443
Alignment:
Q  448 ctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggc 520  Q
    |||||||||||||| ||||  ||  ||| ||| ||||||||||||| ||||| ||||||||||| ||||||||    
T  36662515 ctttcgcatcggtttccgatccattaaaagtggacgactaatccggttcatacgtagaggcatgcgcactggc 36662443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 448 - 531
Target Start/End: Original strand, 68097 - 68180
Alignment:
Q  448 ctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    |||| ||| ||||| ||||| || ||||||||||||| ||||||||||| | |||| |||||||   ||||||||| |||||||    
T  68097 cttttgcaccggtttccgacccatcaaaggtgaacgattaatccggctcgtgtgtaaaggcatgcatactggccaaacgttgtt 68180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 74 - 140
Target Start/End: Complemental strand, 36156692 - 36156625
Alignment:
Q  74 tcttttggcacaccttgtgctagaagagttgcttttggtgattaattta-atttcatttttgattgtt 140  Q
    |||||||||||| ||||| ||||||||||| ||||| ||| ||||| || |||||||||||| |||||    
T  36156692 tcttttggcacatcttgtactagaagagttactttttgtggttaatatatatttcatttttgcttgtt 36156625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 446 - 520
Target Start/End: Original strand, 11298264 - 11298338
Alignment:
Q  446 ggctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggc 520  Q
    |||||||||| ||||| ||||| |||||||||||| ||| ||||  |||||||   |||||||||| ||||||||    
T  11298264 ggctttcgcaccggtttccgacccaccaaaggtgagcgattaatttggctcatgcatagaggcatgcgcactggc 11298338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 446 - 528
Target Start/End: Complemental strand, 16894048 - 16893968
Alignment:
Q  446 ggctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgtt 528  Q
    |||||||||| ||||| ||||| |||||||||||  |||| ||||||||||||  ||| ||||||||| ||||||||| ||||    
T  16894048 ggctttcgcaccggtttccgac-caccaaaggtgggcgac-aatccggctcatgcgtaaaggcatgtgtactggccaagcgtt 16893968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 446 - 531
Target Start/End: Complemental strand, 2964189 - 2964104
Alignment:
Q  446 ggctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    |||||||||| ||||| | ||| |||||||||||  |||||||||||| || |  |||||||||||  || ||||||| |||||||    
T  2964189 ggctttcgcaccggtttctgacccaccaaaggtgggcgactaatccggttcgtgcgtagaggcatgcacattggccaagcgttgtt 2964104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 446 - 531
Target Start/End: Complemental strand, 24837355 - 24837270
Alignment:
Q  446 ggctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    |||||||||| | ||| ||||  ||||||||||| ||||||||||| |||| |   ||||||||||  |||||||||| |||||||    
T  24837355 ggctttcgcaccagtttccgatccaccaaaggtggacgactaatcctgctcgtgcttagaggcatgaacactggccaagcgttgtt 24837270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 446 - 511
Target Start/End: Complemental strand, 27976004 - 27975939
Alignment:
Q  446 ggctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatg 511  Q
    |||||||||||||||||| ||| ||| |||||||  ||| ||||||||||||   |||||||||||    
T  27976004 ggctttcgcatcggttcctgacccactaaaggtgggcgattaatccggctcaagcgtagaggcatg 27975939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 446 - 511
Target Start/End: Complemental strand, 28033273 - 28033208
Alignment:
Q  446 ggctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatg 511  Q
    |||||||||||||||||| ||| ||| |||||||  ||| ||||||||||||   |||||||||||    
T  28033273 ggctttcgcatcggttcctgacccactaaaggtgggcgattaatccggctcaagcgtagaggcatg 28033208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 447 - 523
Target Start/End: Original strand, 3418511 - 3418587
Alignment:
Q  447 gctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaa 523  Q
    ||||||||| ||||| | ||| ||| ||||||| |||||||||| | |||||  ||||| ||||| |||||||||||    
T  3418511 gctttcgcaccggtttctgacccactaaaggtggacgactaatctgactcatgcgtagacgcatgcgcactggccaa 3418587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 117
Target Start/End: Complemental strand, 10267640 - 10267600
Alignment:
Q  77 tttggcacaccttgtgctagaagagttgcttttggtgatta 117  Q
    ||||||||||||||||||||| |||||  ||||||||||||    
T  10267640 tttggcacaccttgtgctagaggagttatttttggtgatta 10267600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 102; Significance: 2e-50; HSPs: 51)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 19 - 140
Target Start/End: Complemental strand, 34231291 - 34231170
Alignment:
Q  19 catcacgtaatggtttgttttggttgtttgtatgattctaaatttgtagagtagctcttttggcacaccttgtgctagaagagttgcttttggtgattaa 118  Q
    |||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  34231291 catcacataatggtttgttttggttgtttgtatgactctaaatttgtagagtagctcttttggcacaccttgtgccagaagagttgcttttggtgattaa 34231192  T
Q  119 tttaatttcatttttgattgtt 140  Q
    | ||||| ||||||||||||||    
T  34231191 tataattccatttttgattgtt 34231170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 19 - 140
Target Start/End: Original strand, 29114097 - 29114218
Alignment:
Q  19 catcacgtaatggtttgttttggttgtttgtatgattctaaatttgtagagtagctcttttggcacaccttgtgctagaagagttgcttttggtgattaa 118  Q
    |||||||||||| |||||| ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  29114097 catcacgtaatgatttgttatggttgtttgtatgactctaaatttttagagtagctcttttggcacaccttgtgctagaatagttgcttttggtgattaa 29114196  T
Q  119 tttaatttcatttttgattgtt 140  Q
    | ||||| ||||||||||||||    
T  29114197 tataattccatttttgattgtt 29114218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 19 - 139
Target Start/End: Complemental strand, 24753010 - 24752890
Alignment:
Q  19 catcacgtaatggtttgttttggttgtttgtatgattctaaatttgtagagtagctcttttggcacaccttgtgctagaagagttgcttttggtgattaa 118  Q
    |||| ||||||||||||||||| |||||||||||| |||  ||||||| ||||| |||||||||||||||||||||| ||||| ||||||||||| ||||    
T  24753010 catcgcgtaatggtttgttttgattgtttgtatgactctgtatttgtaaagtagttcttttggcacaccttgtgctacaagagctgcttttggtggttaa 24752911  T
Q  119 tttaatttcatttttgattgt 139  Q
    | |||||  ||||||||||||    
T  24752910 tataattctatttttgattgt 24752890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 26 - 140
Target Start/End: Original strand, 18654387 - 18654503
Alignment:
Q  26 taatggtttg-ttttggttgtttgtatgattctaaatttgtagagtagctcttttggcacaccttgtgctagaagagttgcttttggtgattaattta-a 123  Q
    |||||||||| |||||||||||||||||| |||   |||||| ||||| |||||||||||||||||||||||| ||||||||||||||| |||||||| |    
T  18654387 taatggtttggttttggttgtttgtatgactctgtgtttgtaaagtagttcttttggcacaccttgtgctagaggagttgcttttggtggttaatttata 18654486  T
Q  124 tttcatttttgattgtt 140  Q
    || ||||||| ||||||    
T  18654487 ttccattttttattgtt 18654503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 33 - 140
Target Start/End: Original strand, 20037562 - 20037670
Alignment:
Q  33 ttgttttggttgtttgtatgattctaaatttgtagagtagctcttttggcacaccttgtgctagaagagttgcttttggtgattaattta-atttcattt 131  Q
    ||||||||||||||||||||| ||||  |||||| ||||| |||||||||||||||| ||||||| ||||||||||||||| ||||| || ||| |||||    
T  20037562 ttgttttggttgtttgtatgactctatgtttgtaaagtagttcttttggcacaccttatgctagaggagttgcttttggtggttaatatatattccattt 20037661  T
Q  132 ttgattgtt 140  Q
    |||||||||    
T  20037662 ttgattgtt 20037670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 26 - 140
Target Start/End: Original strand, 20047686 - 20047801
Alignment:
Q  26 taatggtttgttttggttgtttgtatgattctaaatttgtagagtagctcttttggcacaccttgtgctagaagagttgcttttggtgattaattta-at 124  Q
    |||||||||||||||||||||||||||| ||||  |||||| | ||| |||||||||||||||||| ||||| ||||||||||||||| ||||| || ||    
T  20047686 taatggtttgttttggttgtttgtatgactctatgtttgtaaaatagttcttttggcacaccttgtactagaggagttgcttttggtggttaatatatat 20047785  T
Q  125 ttcatttttgattgtt 140  Q
    | ||||||| ||||||    
T  20047786 tccattttttattgtt 20047801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 446 - 531
Target Start/End: Original strand, 17748379 - 17748464
Alignment:
Q  446 ggctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    |||||||||||||||| ||||| || |||||||| |||||||||||||||| || ||||||||||| ||||||||||| |||||||    
T  17748379 ggctttcgcatcggtttccgacccaacaaaggtggacgactaatccggctcgtacgtagaggcatgcgcactggccaagcgttgtt 17748464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 448 - 523
Target Start/End: Complemental strand, 27028389 - 27028314
Alignment:
Q  448 ctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaa 523  Q
    |||||||| ||||| ||||| |||||||||||| |||||||||| |||||| |||||||||||| |||||||||||    
T  27028389 ctttcgcaccggtttccgacccaccaaaggtgagcgactaatccagctcatgtgtagaggcatgcgcactggccaa 27028314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 448 - 531
Target Start/End: Original strand, 38578866 - 38578949
Alignment:
Q  448 ctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    |||||||| ||||| ||||| |||||||||||  |||||||||||||||||  ||||||||||| ||||||||||| |||||||    
T  38578866 ctttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgtt 38578949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 446 - 523
Target Start/End: Complemental strand, 13095970 - 13095893
Alignment:
Q  446 ggctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaa 523  Q
    |||||| ||| ||||| ||||| |||||||||||| |||||||||||||||||  ||||||||||| |||||||||||    
T  13095970 ggcttttgcaccggtttccgacccaccaaaggtgagcgactaatccggctcatgcgtagaggcatgcgcactggccaa 13095893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 446 - 531
Target Start/End: Original strand, 43861969 - 43862054
Alignment:
Q  446 ggctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    |||||||||| |||||  |||  ||||||||||||| ||||||||||||||||  ||||||||||| ||||||||||| |||||||    
T  43861969 ggctttcgcaccggttttcgatccaccaaaggtgaatgactaatccggctcatgcgtagaggcatgcgcactggccaaacgttgtt 43862054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 446 - 531
Target Start/End: Complemental strand, 48551969 - 48551884
Alignment:
Q  446 ggctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    |||||||||| ||||| ||||  || |||||||| ||||||||||||||||||| ||||||||||| ||| ||||||| |||||||    
T  48551969 ggctttcgcaccggtttccgatccatcaaaggtggacgactaatccggctcatacgtagaggcatgcgcattggccaaccgttgtt 48551884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 448 - 528
Target Start/End: Complemental strand, 41945583 - 41945503
Alignment:
Q  448 ctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgtt 528  Q
    |||||||| || || ||||||||||||||||| |||||||||||||||| |  ||||||||||| ||||||||||| ||||    
T  41945583 ctttcgcaccgatttccgactcaccaaaggtggacgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgtt 41945503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 447 - 523
Target Start/End: Complemental strand, 48804794 - 48804718
Alignment:
Q  447 gctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaa 523  Q
    ||||||||| ||||| ||||| |||||| |||| ||||||||||||||||||  ||||||||||| |||||||||||    
T  48804794 gctttcgcaccggtttccgacccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaa 48804718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 26 - 140
Target Start/End: Original strand, 7459226 - 7459340
Alignment:
Q  26 taatggtttgttttggttgtttgtatgattctaaatttgtagagtagctcttttggcacaccttgtgctagaagagttgcttttggtgattaattta-at 124  Q
    |||||||||||||||||||||||||||  |||    ||||| ||||  |||||||||||||||||||||||  ||||||||||||||| ||||| || ||    
T  7459226 taatggtttgttttggttgtttgtatggctctgttcttgta-agtaattcttttggcacaccttgtgctaggggagttgcttttggtgtttaatatatat 7459324  T
Q  125 ttcatttttgattgtt 140  Q
    | |||||||| |||||    
T  7459325 tccatttttgtttgtt 7459340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 449 - 531
Target Start/End: Original strand, 26423288 - 26423369
Alignment:
Q  449 tttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    ||||||| ||||| ||||| |||||||||||||||||||||| ||||| |  ||||||||| ||||||||||||| |||||||    
T  26423288 tttcgcaccggtttccgac-caccaaaggtgaacgactaatctggctcgtgcgtagaggcaggtgcactggccaagcgttgtt 26423369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 446 - 531
Target Start/End: Complemental strand, 1606053 - 1605968
Alignment:
Q  446 ggctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    |||||||||| ||||| ||||  |||||||||||  ||||||||||||||||    |||||||||||||||||||||| |||||||    
T  1606053 ggctttcgcaccggtttccgatccaccaaaggtgggcgactaatccggctcaagcctagaggcatgtgcactggccaagcgttgtt 1605968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 446 - 523
Target Start/End: Complemental strand, 28744274 - 28744197
Alignment:
Q  446 ggctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaa 523  Q
    |||||||||| | ||| ||||| ||||||||||| |||||||||||||||| |||||||||| ||| | |||||||||    
T  28744274 ggctttcgcaccagtttccgacccaccaaaggtggacgactaatccggctcgtatgtagaggtatgcgtactggccaa 28744197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 19 - 117
Target Start/End: Complemental strand, 4076867 - 4076768
Alignment:
Q  19 catcacgtaatggtttgttttggttgtttgtatgattctaaatttgtagagtagctcttttggcacaccttgtgctagaagag-ttgcttttggtgatta 117  Q
    |||||| |||||||||||||||| || |||| ||| |||   ||| || ||||  |||||||||||||||||||||||| ||| ||||||||||||||||    
T  4076867 catcacttaatggtttgttttggatgcttgtctgactctttgtttttaaagtaattcttttggcacaccttgtgctagaggagtttgcttttggtgatta 4076768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 450 - 523
Target Start/End: Complemental strand, 18785777 - 18785704
Alignment:
Q  450 ttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaa 523  Q
    |||||| ||||| ||||| ||||| ||||||||||||||||| | ||||  ||||||||||| |||||||||||    
T  18785777 ttcgcaccggtttccgacccaccagaggtgaacgactaatccagttcatgcgtagaggcatgcgcactggccaa 18785704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 446 - 531
Target Start/End: Original strand, 22993364 - 22993449
Alignment:
Q  446 ggctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    |||||||||| ||||| | ||| |||||||||||| |||||||||||| || |  |||||||||||  |||||||||| |||||||    
T  22993364 ggctttcgcaccggtttctgacccaccaaaggtgagcgactaatccggttcgtgcgtagaggcatgcacactggccaagcgttgtt 22993449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 446 - 531
Target Start/End: Original strand, 42210259 - 42210344
Alignment:
Q  446 ggctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    |||||||||||||||| ||||| |||||| ||||   || ||||||||||| |  ||||||||||| ||||||||||| |||||||    
T  42210259 ggctttcgcatcggtttccgacccaccaacggtgggtgattaatccggctcgtgcgtagaggcatgcgcactggccaaacgttgtt 42210344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 447 - 523
Target Start/End: Original strand, 4195200 - 4195276
Alignment:
Q  447 gctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaa 523  Q
    ||||||||||||||| || || |||||| |||| ||| ||||||||||||||  ||||||||||| ||||| |||||    
T  4195200 gctttcgcatcggtttccaacccaccaatggtggacggctaatccggctcatgcgtagaggcatgcgcactagccaa 4195276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 446 - 517
Target Start/End: Original strand, 24983415 - 24983487
Alignment:
Q  446 ggctttcgcatcggttccc-gactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcact 517  Q
    |||||||||||||||| || ||| |||||| |||| ||||||||||||||||||  ||||||||||| |||||    
T  24983415 ggctttcgcatcggtttccagacccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcact 24983487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 447 - 531
Target Start/End: Complemental strand, 42032207 - 42032123
Alignment:
Q  447 gctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    ||||| ||||||||| ||||| || |||||||| || |||||| ||||||||  ||||| | ||||||||||||||| |||||||    
T  42032207 gctttagcatcggtttccgacccatcaaaggtggacaactaattcggctcatgcgtagatgtatgtgcactggccaaacgttgtt 42032123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 447 - 523
Target Start/End: Original strand, 43346777 - 43346853
Alignment:
Q  447 gctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaa 523  Q
    |||||||||  |||| ||||| |||||||| ||| ||||||||||||||| || ||||||||||| |||| ||||||    
T  43346777 gctttcgcactggtttccgacccaccaaagatgagcgactaatccggctcgtacgtagaggcatgcgcaccggccaa 43346853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 464 - 531
Target Start/End: Complemental strand, 16802217 - 16802150
Alignment:
Q  464 cgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    |||| |||||| ||||| ||||||||||||||| |  ||||||||||  |||||||||||||||||||    
T  16802217 cgacccaccaatggtgagcgactaatccggctcgtgcgtagaggcatacgcactggccaatcgttgtt 16802150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 469 - 523
Target Start/End: Original strand, 5039438 - 5039492
Alignment:
Q  469 caccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaa 523  Q
    |||||||||||| |||||||||||||||||  ||||||| |||||||||| ||||    
T  5039438 caccaaaggtgagcgactaatccggctcatgcgtagaggtatgtgcactgaccaa 5039492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 469 - 531
Target Start/End: Complemental strand, 23658268 - 23658206
Alignment:
Q  469 caccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    |||||||| || |||||||||||||||| | ||||||||||||  |||||||||| |||||||    
T  23658268 caccaaagatggacgactaatccggctcgtgtgtagaggcatgcacactggccaagcgttgtt 23658206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 449 - 523
Target Start/End: Original strand, 27875088 - 27875162
Alignment:
Q  449 tttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaa 523  Q
    ||||||| |||||  |||| ||| ||||||| ||||||||| || |||||  |||||||||||||||||||||||    
T  27875088 tttcgcaccggttttcgacccactaaaggtggacgactaatgcgactcatgcgtagaggcatgtgcactggccaa 27875162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 482 - 531
Target Start/End: Original strand, 4228787 - 4228836
Alignment:
Q  482 cgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    |||||||||||||||||  |||| |||||||||||||||||| |||||||    
T  4228787 cgactaatccggctcatgcgtaggggcatgtgcactggccaaacgttgtt 4228836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 446 - 511
Target Start/End: Original strand, 5069812 - 5069877
Alignment:
Q  446 ggctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatg 511  Q
    |||||||||||||||| ||||| |||||||||||  ||||||||||||||  |  |||||||||||    
T  5069812 ggctttcgcatcggtttccgacccaccaaaggtgggcgactaatccggcttgtgcgtagaggcatg 5069877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 446 - 523
Target Start/End: Original strand, 10047873 - 10047950
Alignment:
Q  446 ggctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaa 523  Q
    |||||||||| ||||| ||||| |||||| |||| ||||||||| | ||||||  |||||||| || |||||||||||    
T  10047873 ggctttcgcaccggtttccgacccaccaatggtggacgactaattctgctcatgcgtagaggcctgcgcactggccaa 10047950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 446 - 519
Target Start/End: Complemental strand, 14650429 - 14650356
Alignment:
Q  446 ggctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactgg 519  Q
    |||||||||| |||||  | || |||||||||||| ||||||| |||||||||  |||||||||| ||||||||    
T  14650429 ggctttcgcaccggttttcaacccaccaaaggtgagcgactaacccggctcatgcgtagaggcatatgcactgg 14650356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 446 - 523
Target Start/End: Complemental strand, 21530860 - 21530783
Alignment:
Q  446 ggctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaa 523  Q
    |||||||| | ||||| ||||| |||||||||||| ||| |||| |||||| |  |||||||||||||||||| ||||    
T  21530860 ggctttcgaaccggtttccgacccaccaaaggtgagcgattaattcggctcgtgcgtagaggcatgtgcactgaccaa 21530783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 446 - 531
Target Start/End: Complemental strand, 22974079 - 22973994
Alignment:
Q  446 ggctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    |||||||||  ||||| | ||| ||||||||||| |||||||||| |||||||  ||||| |||||  |||||||||| |||||||    
T  22974079 ggctttcgcgccggtttctgacccaccaaaggtggacgactaatctggctcatgcgtagacgcatgcacactggccaagcgttgtt 22973994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 446 - 531
Target Start/End: Complemental strand, 29152052 - 29151967
Alignment:
Q  446 ggctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    |||||||||||||||| ||||| || ||| |||  |||| |||||||| || | |||||||||||| ||||||| ||| |||||||    
T  29152052 ggctttcgcatcggtttccgacccatcaatggtagacgattaatccggatcgtgtgtagaggcatgcgcactggtcaaacgttgtt 29151967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 446 - 531
Target Start/End: Complemental strand, 39420949 - 39420864
Alignment:
Q  446 ggctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    |||||| ||| ||||| ||| | || |||||||  ||||||||||||||||||  ||||||||| | ||||||||||| |||||||    
T  39420949 ggcttttgcaccggtttccggcccatcaaaggtagacgactaatccggctcatgcgtagaggcacgcgcactggccaagcgttgtt 39420864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 446 - 523
Target Start/End: Complemental strand, 47341988 - 47341911
Alignment:
Q  446 ggctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaa 523  Q
    |||||||||| || || ||||| |||||| |||||||||| ||||| |||| |  ||||||||||| |||||||||||    
T  47341988 ggctttcgcaccgatttccgacccaccaatggtgaacgaccaatcctgctcgtgcgtagaggcatgcgcactggccaa 47341911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 447 - 531
Target Start/End: Complemental strand, 34659337 - 34659253
Alignment:
Q  447 gctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    ||||||||| |||||  |||| |||||| ||||  ||||||||||||||| |  ||||||||||| ||||||| ||| |||||||    
T  34659337 gctttcgcaccggttttcgacacaccaatggtgggcgactaatccggctcgtgcgtagaggcatgcgcactggtcaagcgttgtt 34659253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 447 - 531
Target Start/End: Complemental strand, 39475051 - 39474967
Alignment:
Q  447 gctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    |||||||||  ||||  |||| ||| ||||||| ||||||||||||||||||  ||||||| ||| |||||| |||| |||||||    
T  39475051 gctttcgcactggttttcgacccactaaaggtggacgactaatccggctcatgcgtagaggtatgcgcactgaccaagcgttgtt 39474967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 472 - 523
Target Start/End: Complemental strand, 3353510 - 3353459
Alignment:
Q  472 caaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaa 523  Q
    |||||||| |||||||||||||||| |  ||||||||||| |||||||||||    
T  3353510 caaaggtggacgactaatccggctcgtgcgtagaggcatgcgcactggccaa 3353459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 464 - 523
Target Start/End: Complemental strand, 38988994 - 38988935
Alignment:
Q  464 cgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaa 523  Q
    |||| |||||||| ||| |||||||||||| ||||  |||||||||||||||||| ||||    
T  38988994 cgacccaccaaagatgagcgactaatccggttcatgcgtagaggcatgtgcactgaccaa 38988935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 446 - 509
Target Start/End: Original strand, 48244353 - 48244416
Alignment:
Q  446 ggctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggca 509  Q
    |||||||||| |||||  |||  |||||||||||| |||||||||||||||||  |||||||||    
T  48244353 ggctttcgcaccggttttcgatccaccaaaggtgagcgactaatccggctcatgcgtagaggca 48244416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 448 - 518
Target Start/End: Complemental strand, 3603467 - 3603397
Alignment:
Q  448 ctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactg 518  Q
    |||||||| || || ||||| ||||||| |||||||| ||||||||||| |  ||||||||||| ||||||    
T  3603467 ctttcgcaccgatttccgacccaccaaaagtgaacgattaatccggctcgtgcgtagaggcatgcgcactg 3603397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 446 - 512
Target Start/End: Complemental strand, 32769049 - 32768983
Alignment:
Q  446 ggctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgt 512  Q
    ||||||| || ||||| ||||  |||||||||||||||||||||||| ||| |  ||||||||||||    
T  32769049 ggctttcacaccggtttccgatccaccaaaggtgaacgactaatccgactcgtgcgtagaggcatgt 32768983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 140
Target Start/End: Original strand, 23397267 - 23397331
Alignment:
Q  76 ttttggcacaccttgtgctagaagagttgcttttggtgattaattta-atttcatttttgattgtt 140  Q
    |||| ||||||||||||||||| ||||| ||||||||| ||||| || ||| ||||||||||||||    
T  23397267 ttttagcacaccttgtgctagaggagtttcttttggtg-ttaatatatattccatttttgattgtt 23397331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 68 - 136
Target Start/End: Complemental strand, 28060120 - 28060051
Alignment:
Q  68 agtagctcttttggcacaccttgtgctagaagagttgcttttggtgattaattta-atttcatttttgat 136  Q
    |||| ||| |||| |||||||| ||||||| ||||||||||||||| ||||| || |||| |||||||||    
T  28060120 agtaactcatttgacacaccttatgctagaggagttgcttttggtgtttaatatatattttatttttgat 28060051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 467 - 511
Target Start/End: Original strand, 4973128 - 4973172
Alignment:
Q  467 ctcaccaaaggtgaacgactaatccggctcatatgtagaggcatg 511  Q
    |||||||||| || |||||||||||||||| || |||||||||||    
T  4973128 ctcaccaaagctggacgactaatccggctcgtacgtagaggcatg 4973172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 447 - 523
Target Start/End: Original strand, 8734684 - 8734760
Alignment:
Q  447 gctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaa 523  Q
    ||||||||| ||||| ||||| |||||||||||  ||||||||| ||||| |  || |||||||| |||||| ||||    
T  8734684 gctttcgcaccggtttccgacccaccaaaggtgggcgactaatctggctcgtgcgttgaggcatgcgcactgcccaa 8734760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 472 - 532
Target Start/End: Original strand, 45960026 - 45960086
Alignment:
Q  472 caaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgttg 532  Q
    ||||||||| |||||||||||||| ||  ||||||||||| |||||| ||||  |||||||    
T  45960026 caaaggtgagcgactaatccggcttatgcgtagaggcatgcgcactgaccaagtgttgttg 45960086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 99; Significance: 1e-48; HSPs: 70)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 19 - 141
Target Start/End: Original strand, 18107104 - 18107226
Alignment:
Q  19 catcacgtaatggtttgttttggttgtttgtatgattctaaatttgtagagtagctcttttggcacaccttgtgctagaagagttgcttttggtgattaa 118  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  18107104 catcacgtaatggtttgttttggttgtttgtatgactctaaatttgtagagtagttcttttggcacaccttgtgccagaagagttgcttttggtgattaa 18107203  T
Q  119 tttaatttcatttttgattgttg 141  Q
    | ||||| ||||||| |||||||    
T  18107204 tataattccattttttattgttg 18107226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 19 - 140
Target Start/End: Original strand, 30274360 - 30274482
Alignment:
Q  19 catcacgtaatggtttgttttggttgtttgtatgattctaaattt-gtagagtagctcttttggcacaccttgtgctagaagagttgcttttggtgatta 117  Q
    ||||||||||||||||||||||||||||||||||| ||||| ||| |||||||||||||||||||||| ||| |||||||||||||||||||||||||||    
T  30274360 catcacgtaatggtttgttttggttgtttgtatgactctaagttttgtagagtagctcttttggcacatcttatgctagaagagttgcttttggtgatta 30274459  T
Q  118 atttaatttcatttttgattgtt 140  Q
    || ||||| ||||||||||||||    
T  30274460 atataattccatttttgattgtt 30274482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 19 - 140
Target Start/End: Original strand, 34322867 - 34322988
Alignment:
Q  19 catcacgtaatggtttgttttggttgtttgtatgattctaaatttgtagagtagctcttttggcacaccttgtgctagaagagttgcttttggtgattaa 118  Q
    ||||||||||||||||||||||||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |    
T  34322867 catcacgtaatggtttgttttggttgtttatatgactctaagtttgtagagtagctcttttggcacaccttgtgctagaagagttgtttttggtgattta 34322966  T
Q  119 tttaatttcatttttgattgtt 140  Q
    | ||||| ||||||| ||||||    
T  34322967 tataattccattttttattgtt 34322988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 19 - 140
Target Start/End: Complemental strand, 42823036 - 42822915
Alignment:
Q  19 catcacgtaatggtttgttttggttgtttgtatgattctaaatttgtagagtagctcttttggcacaccttgtgctagaagagttgcttttggtgattaa 118  Q
    |||||||||||||||||||||| | |||||||||| ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |    
T  42823036 catcacgtaatggtttgttttgatggtttgtatgactctaagtttgtagagtagctcttttggcacactttgtgctagaagagttgcttttggtgattta 42822937  T
Q  119 tttaatttcatttttgattgtt 140  Q
    | ||||| ||||||||||||||    
T  42822936 tataattccatttttgattgtt 42822915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 19 - 140
Target Start/End: Complemental strand, 449643 - 449522
Alignment:
Q  19 catcacgtaatggtttgttttggttgtttgtatgattctaaatttgtagagtagctcttttggcacaccttgtgctagaagagttgcttttggtgattaa 118  Q
    ||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| ||| |||| |||||||||||||| ||||||||    
T  449643 catcacgtaatggtttgttttggttgtttgtatgactctaagtttgtagagtagctcttttggcacatcttatgctggaagagttgcttttcgtgattaa 449544  T
Q  119 tttaatttcatttttgattgtt 140  Q
    | ||||| ||||||| ||||||    
T  449543 tataattccattttttattgtt 449522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 19 - 140
Target Start/End: Original strand, 52741386 - 52741506
Alignment:
Q  19 catcacgtaatggtttgttttggttgtttgtatgattctaaatttgtagagtagctcttttggcacaccttgtgctagaagagttgcttttggtgattaa 118  Q
    |||||| ||||||||||||| |||||||||||||| |||  |||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  52741386 catcacttaatggtttgttt-ggttgtttgtatgactctttatttatagagtagttcttttggcacaccttgtgctagaagagttgcttttggtgattaa 52741484  T
Q  119 tttaatttcatttttgattgtt 140  Q
    | ||||||||||||||||||||    
T  52741485 tataatttcatttttgattgtt 52741506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 25 - 140
Target Start/End: Complemental strand, 19164572 - 19164457
Alignment:
Q  25 gtaatggtttgttttggttgtttgtatgattctaaatttgtagagtagctcttttggcacaccttgtgctagaagagttgcttttggtgattaatttaat 124  Q
    ||||||||||| ||||||||||||||||| ||||  |||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||| ||||    
T  19164572 gtaatggtttgctttggttgtttgtatgactctatgtttgtagagtagttcttttggcacaccttgtgctagaagagttgcttttggtggttaatataat 19164473  T
Q  125 ttcatttttgattgtt 140  Q
    | ||||||||||||||    
T  19164472 tccatttttgattgtt 19164457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 19 - 140
Target Start/End: Complemental strand, 42777830 - 42777710
Alignment:
Q  19 catcacgtaatggtttgttttggttgtttgtatgattctaaatttgtagagtagctcttttggcacaccttgtgctagaagagttgcttttggtgattaa 118  Q
    |||||||||||||||||||| ||| |||||||||| |||  ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||     
T  42777830 catcacgtaatggtttgttt-ggtggtttgtatgactctttatttgtagagtagttcttttggcacaccttgtgctagaagagttgcttttggtgattat 42777732  T
Q  119 tttaatttcatttttgattgtt 140  Q
    | ||||| |||||||| |||||    
T  42777731 tataattccatttttgtttgtt 42777710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 19 - 140
Target Start/End: Original strand, 53487501 - 53487622
Alignment:
Q  19 catcacgtaatggtttgttttggttgtttgtatgattctaaatttgtagagtagctcttttggcacaccttgtgctagaagagttgcttttggtgattaa 118  Q
    ||||||||||||||||||||||||||||||||||| ||||  |||||||||||  |||||||||||| ||||||||||||||||||||||| |||||| |    
T  53487501 catcacgtaatggtttgttttggttgtttgtatgactctatgtttgtagagtaattcttttggcacatcttgtgctagaagagttgctttttgtgattta 53487600  T
Q  119 tttaatttcatttttgattgtt 140  Q
    | ||||| ||||| | ||||||    
T  53487601 tataattccatttcttattgtt 53487622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 19 - 140
Target Start/End: Complemental strand, 31863858 - 31863737
Alignment:
Q  19 catcacgtaatggtttgttttggttgtttgtatgattctaaatttgtagagtagctcttttggcacaccttgtgctagaagagttgcttttggtgattaa 118  Q
    |||| ||||||||||||||||||||| |||||| | |||  ||||||| ||||| |||| ||||||||||||||||||||||||||||||||||| ||||    
T  31863858 catcgcgtaatggtttgttttggttggttgtataactctgtatttgtaaagtagttcttgtggcacaccttgtgctagaagagttgcttttggtggttaa 31863759  T
Q  119 tttaatttcatttttgattgtt 140  Q
    | ||||| |||||||| |||||    
T  31863758 tataattccatttttgtttgtt 31863737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 19 - 140
Target Start/End: Complemental strand, 34005486 - 34005365
Alignment:
Q  19 catcacgtaatggtttgttttggttgtttgtatgattctaaatttgtagagtagctcttttggcacaccttgtgctagaagagttgcttttggtgattaa 118  Q
    |||| ||||||||||||||||||||| |||||| | |||  ||||||| ||||| |||| ||||||||||| | ||||||||||||||||||||| ||||    
T  34005486 catcgcgtaatggtttgttttggttggttgtataactctgtatttgtaaagtagttcttatggcacaccttatactagaagagttgcttttggtggttaa 34005387  T
Q  119 tttaatttcatttttgattgtt 140  Q
    | ||||| |||||||| |||||    
T  34005386 tataattccatttttgtttgtt 34005365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 19 - 140
Target Start/End: Original strand, 12881233 - 12881355
Alignment:
Q  19 catcacgtaatggtttgttttggttgtttgtatgattctaaatttgtagagtagctcttttggcacaccttgtgctagaagagttgcttttggtgattaa 118  Q
    |||| ||||||||||| || || |||||||||||| |||   ||||||||||||||||||||| ||||||||||||||| ||||||||||||||| ||||    
T  12881233 catcgcgtaatggttttttatgtttgtttgtatgactctgtgtttgtagagtagctcttttggtacaccttgtgctagaggagttgcttttggtggttaa 12881332  T
Q  119 t-ttaatttcatttttgattgtt 140  Q
    | | |||| |||| |||||||||    
T  12881333 tataaattccattgttgattgtt 12881355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 19 - 86
Target Start/End: Complemental strand, 55854386 - 55854319
Alignment:
Q  19 catcacgtaatggtttgttttggttgtttgtatgattctaaatttgtagagtagctcttttggcacac 86  Q
    ||||||||||||||||||||||||||||||||||| |||| ||||||||||||| |||||||||||||    
T  55854386 catcacgtaatggtttgttttggttgtttgtatgactctatatttgtagagtagttcttttggcacac 55854319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 18 - 140
Target Start/End: Original strand, 1844804 - 1844928
Alignment:
Q  18 acatcacgtaatggtttgttt-tggttgtttgtatgattctaaatttgtagagtagctcttttggcacaccttgtgctagaagagttgcttttggtgatt 116  Q
    ||||| ||||||||||| ||| || |||||||||||| |||   ||||||||||||||||||||||||||||||||||||| |||||| ||||| || ||    
T  1844804 acatcgcgtaatggtttttttatgtttgtttgtatgactctgtgtttgtagagtagctcttttggcacaccttgtgctagaggagttgtttttgatggtt 1844903  T
Q  117 aat-ttaatttcatttttgattgtt 140  Q
    ||| | |||| ||||||| ||||||    
T  1844904 aatataaattccattttttattgtt 1844928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 447 - 531
Target Start/End: Complemental strand, 16450413 - 16450329
Alignment:
Q  447 gctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    ||||||||| ||||| |||||  |||||||||| |||||||||| |||||||  ||||||||||||||||||||||| |||||||    
T  16450413 gctttcgcaccggtttccgacctaccaaaggtggacgactaatctggctcatgcgtagaggcatgtgcactggccaagcgttgtt 16450329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 447 - 531
Target Start/End: Complemental strand, 52950195 - 52950111
Alignment:
Q  447 gctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    ||||||||||||||| ||||| ||||||||||| |||||||||| || |||| ||||||| |||| ||||||||||| |||||||    
T  52950195 gctttcgcatcggtttccgacccaccaaaggtggacgactaatctggttcatgtgtagagtcatgcgcactggccaagcgttgtt 52950111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 26 - 140
Target Start/End: Complemental strand, 53779630 - 53779514
Alignment:
Q  26 taatggtttgttttggttgtttgtatgattctaaatttgtagagtagctcttttggcacaccttgtgctagaagagttgcttttggtg-attaattta-a 123  Q
    |||||||||||||||||||||||||||| | |    ||||| ||||  ||||||||||||||||||||||| ||||||||||||||||  ||||| || |    
T  53779630 taatggtttgttttggttgtttgtatgactatgttcttgtaaagtaattcttttggcacaccttgtgctaggagagttgcttttggtgttttaatatata 53779531  T
Q  124 tttcatttttgattgtt 140  Q
    |||||||||| ||||||    
T  53779530 tttcattttttattgtt 53779514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 448 - 531
Target Start/End: Original strand, 7246645 - 7246728
Alignment:
Q  448 ctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    |||||||| ||||| ||||| |||||||||||  |||||||||||||||||  ||||||||||| ||||||||||| |||||||    
T  7246645 ctttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgtt 7246728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 448 - 531
Target Start/End: Original strand, 42722576 - 42722659
Alignment:
Q  448 ctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    |||||||| |||||  |||| ||| ||||||||||||||||||||||||||  ||||||||||| ||||||||||| |||||||    
T  42722576 ctttcgcaccggttttcgacccactaaaggtgaacgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgtt 42722659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 449 - 531
Target Start/End: Original strand, 40780861 - 40780943
Alignment:
Q  449 tttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    ||||||| ||||| ||||| ||||||||||| ||||||||||||||||||  ||||||||||| |||||| |||| |||||||    
T  40780861 tttcgcaccggtttccgacccaccaaaggtggacgactaatccggctcatgcgtagaggcatgcgcactgaccaagcgttgtt 40780943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 446 - 531
Target Start/End: Original strand, 36145212 - 36145297
Alignment:
Q  446 ggctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    |||||||||| ||||| |||| ||| |||||||| |||||||||||||||||| |||||||||||| ||||||  ||| |||||||    
T  36145212 ggctttcgcaccggtttccgattcatcaaaggtggacgactaatccggctcatgtgtagaggcatgcgcactgatcaagcgttgtt 36145297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 446 - 531
Target Start/End: Complemental strand, 38168370 - 38168286
Alignment:
Q  446 ggctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    |||||||||| ||||| || || ||| ||||||||||||||||||||||||||  ||||||||||| ||||||||||| |||||||    
T  38168370 ggctttcgcaccggtttccaacccactaaaggtgaacgactaatccggctcatgcgtagaggcatg-gcactggccaagcgttgtt 38168286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 446 - 531
Target Start/End: Complemental strand, 53599174 - 53599089
Alignment:
Q  446 ggctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    |||||||||| ||||| ||||  ||| |||||||||||| |||||||||||||  ||||||||||| ||||||||||| |||||||    
T  53599174 ggctttcgcaccggtttccgatccactaaaggtgaacgattaatccggctcatgcgtagaggcatgcgcactggccaaacgttgtt 53599089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 447 - 531
Target Start/End: Complemental strand, 38075546 - 38075462
Alignment:
Q  447 gctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    ||||||||||||||| ||||| ||||||||||| || | |||| ||||||||  ||||||||||| ||||||||||| |||||||    
T  38075546 gctttcgcatcggtttccgacccaccaaaggtggacaattaattcggctcatgcgtagaggcatgcgcactggccaagcgttgtt 38075462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 448 - 528
Target Start/End: Complemental strand, 43458725 - 43458645
Alignment:
Q  448 ctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgtt 528  Q
    |||||||| ||||| |||||||| |||||||| |||||||||||||||| |  ||||||||||| ||||||||||| ||||    
T  43458725 ctttcgcaacggtttccgactcatcaaaggtggacgactaatccggctcgtccgtagaggcatgcgcactggccaagcgtt 43458645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 447 - 531
Target Start/End: Complemental strand, 47078571 - 47078487
Alignment:
Q  447 gctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    |||||||||  |||| ||||| |||||| ||||| ||||||||||||||| |  ||||||||||||||||||||||| |||||||    
T  47078571 gctttcgcactggtttccgacccaccaatggtgagcgactaatccggctcgtgcgtagaggcatgtgcactggccaagcgttgtt 47078487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 447 - 523
Target Start/End: Complemental strand, 55921147 - 55921071
Alignment:
Q  447 gctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaa 523  Q
    ||||||||| ||||| ||||| |||||||||||| ||| |||||||||||||| ||||||||||| |||||| ||||    
T  55921147 gctttcgcaccggtttccgacccaccaaaggtgagcgattaatccggctcatacgtagaggcatgcgcactgaccaa 55921071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 447 - 522
Target Start/End: Complemental strand, 6779324 - 6779249
Alignment:
Q  447 gctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggcca 522  Q
    ||||||||||||| | |||| |||||||||||| ||||||||||||||||||   |||||||||| ||||||||||    
T  6779324 gctttcgcatcgggttccgattcaccaaaggtggacgactaatccggctcatgcatagaggcatgcgcactggcca 6779249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 26 - 140
Target Start/End: Original strand, 10563864 - 10563978
Alignment:
Q  26 taatggtttgttttggttgtttgtatgattctaaatttgtagagtagctcttttggcacaccttgtgctagaagagttgcttttggtgattaattta-at 124  Q
    |||||||||||||||||||||||||||| |||    ||||| ||||  |||| ||||||||||| ||||||  ||||||||||||||| ||||| || ||    
T  10563864 taatggtttgttttggttgtttgtatgactctgttcttgta-agtaattcttctggcacaccttatgctaggggagttgcttttggtgtttaatatatat 10563962  T
Q  125 ttcatttttgattgtt 140  Q
    | ||||||||||||||    
T  10563963 tccatttttgattgtt 10563978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 446 - 531
Target Start/End: Original strand, 36262764 - 36262849
Alignment:
Q  446 ggctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    ||||||||||| |||| | ||| |||||||||||  ||||||||||| ||| |  ||||||||||||||||||||||| |||||||    
T  36262764 ggctttcgcattggtttctgacccaccaaaggtgggcgactaatccgactcgtgcgtagaggcatgtgcactggccaagcgttgtt 36262849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 26 - 140
Target Start/End: Original strand, 29213535 - 29213651
Alignment:
Q  26 taatggtttgttttggttgtttgtatgattctaaatttgtagagtagctcttttggcacaccttgtgctagaagagttgcttttggtg-attaattta-a 123  Q
    |||||||||||||||||||||||||||| |||    ||||| ||||  | |||||||||||||| | |||| ||||||||||||||||  ||||| || |    
T  29213535 taatggtttgttttggttgtttgtatgactctcttcttgtaaagtaattattttggcacaccttatactaggagagttgcttttggtgttttaatatata 29213634  T
Q  124 tttcatttttgattgtt 140  Q
    || ||||||||||||||    
T  29213635 ttccatttttgattgtt 29213651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 447 - 531
Target Start/End: Complemental strand, 38166140 - 38166056
Alignment:
Q  447 gctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    ||||||||| ||||| ||||| |||||||||||  ||||||||||||||| |  |||||| |||| ||||||||||| |||||||    
T  38166140 gctttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcgtgcgtagagccatgcgcactggccaagcgttgtt 38166056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 448 - 531
Target Start/End: Complemental strand, 2559419 - 2559336
Alignment:
Q  448 ctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    |||||||| ||||| ||||| ||||||||||| |||| ||||||||||  |  ||||||||||| ||||||||||| |||||||    
T  2559419 ctttcgcaccggtttccgacccaccaaaggtggacgagtaatccggcttgtgcgtagaggcatgcgcactggccaagcgttgtt 2559336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 448 - 523
Target Start/End: Complemental strand, 14124128 - 14124053
Alignment:
Q  448 ctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaa 523  Q
    |||||||| ||||| || || |||||| ||||| ||||||||||||||| | |||||||||||| |||||||||||    
T  14124128 ctttcgcaccggtttccaacccaccaatggtgagcgactaatccggctcgtgtgtagaggcatgcgcactggccaa 14124053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 15 - 113
Target Start/End: Complemental strand, 20395192 - 20395096
Alignment:
Q  15 tggacatcacgtaatggtttgttttggttgtttgtatgattctaaatttgtagagtagctcttttggcacaccttgtgctagaagagttgcttttggtg 113  Q
    |||||||| ||| |||||||  |||| |||||||||||| |||   |||||||||||||||||||| |||||||||| ||| | ||| |||||||||||    
T  20395192 tggacatcgcgtgatggttt--tttgtttgtttgtatgactctgtgtttgtagagtagctcttttgacacaccttgtactacaggagctgcttttggtg 20395096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 448 - 523
Target Start/End: Complemental strand, 29895899 - 29895824
Alignment:
Q  448 ctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaa 523  Q
    |||||||| ||||| ||||  |||||| |||| ||||||||||||||||||  ||||||||||| |||||||||||    
T  29895899 ctttcgcaccggtttccgaaccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaa 29895824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 448 - 523
Target Start/End: Complemental strand, 31588798 - 31588723
Alignment:
Q  448 ctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaa 523  Q
    |||||||||||||| ||||  ||||||| |||| |||||||||||||||||  |||||| |||| |||||||||||    
T  31588798 ctttcgcatcggtttccgatccaccaaaagtgagcgactaatccggctcatgcgtagagacatgcgcactggccaa 31588723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 449 - 519
Target Start/End: Original strand, 6032643 - 6032713
Alignment:
Q  449 tttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactgg 519  Q
    ||||||| ||||| ||||| ||||||||||  ||||||||||||||||||  ||||||||||| |||||||    
T  6032643 tttcgcaccggtttccgacccaccaaaggtagacgactaatccggctcattcgtagaggcatgagcactgg 6032713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 447 - 521
Target Start/End: Original strand, 48834698 - 48834772
Alignment:
Q  447 gctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggcc 521  Q
    ||||||||| ||||| ||||| ||||||||||   ||||||||||| ||||| | ||||||||||||||||||||    
T  48834698 gctttcgcaccggtttccgacccaccaaaggtaggcgactaatccgactcatgtatagaggcatgtgcactggcc 48834772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 446 - 531
Target Start/End: Complemental strand, 4738732 - 4738647
Alignment:
Q  446 ggctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    |||||||||| ||||| ||||| ||||||||||| ||||||||| | ||||||  |||||| |||| |||||||| || |||||||    
T  4738732 ggctttcgcaccggtttccgacccaccaaaggtggacgactaattcagctcatgcgtagagacatgcgcactggcaaagcgttgtt 4738647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 447 - 528
Target Start/End: Original strand, 47682380 - 47682461
Alignment:
Q  447 gctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgtt 528  Q
    ||||||||| ||||| ||||| |||||||||||  ||||||| ||||||| |  |||||| |||||||||||||||| ||||    
T  47682380 gctttcgcaccggtttccgacccaccaaaggtgggcgactaacccggctcgtgcgtagagacatgtgcactggccaaacgtt 47682461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 446 - 531
Target Start/End: Original strand, 49260662 - 49260747
Alignment:
Q  446 ggctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    |||||| ||| || || ||||| |||||||||||  ||||||||||||||| |  ||||||||||| ||||||||||| |||||||    
T  49260662 ggcttttgcaccgatttccgacccaccaaaggtggtcgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgtt 49260747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 447 - 531
Target Start/End: Original strand, 3159467 - 3159551
Alignment:
Q  447 gctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    ||||| ||| ||||| ||||| |||||| ||||| ||||||||| ||||| |  ||||||||||| ||||||||||| |||||||    
T  3159467 gcttttgcaccggtttccgacccaccaatggtgagcgactaatctggctcgtgcgtagaggcatgcgcactggccaagcgttgtt 3159551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 447 - 531
Target Start/End: Original strand, 5472846 - 5472930
Alignment:
Q  447 gctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    ||||||||| | |||  |||| |||||||||||  ||||||||||||||| |  ||||||||||| ||||||||||| |||||||    
T  5472846 gctttcgcaccagttttcgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgtt 5472930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 447 - 531
Target Start/End: Complemental strand, 16645231 - 16645147
Alignment:
Q  447 gctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    ||||||||| ||||| ||||| ||||| |||||  ||||||||| | ||||| ||||||||||||  |||||||||| |||||||    
T  16645231 gctttcgcaccggtttccgacccaccacaggtgggcgactaatcagactcatgtgtagaggcatgcacactggccaagcgttgtt 16645147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 447 - 531
Target Start/End: Complemental strand, 17080156 - 17080072
Alignment:
Q  447 gctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    ||||||||| |||||  |||  || ||||||||  |||||||||||||||||  ||||||||||| ||||||||||| |||||||    
T  17080156 gctttcgcaccggttttcgatccatcaaaggtgtgcgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgtt 17080072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 463 - 531
Target Start/End: Original strand, 48352523 - 48352591
Alignment:
Q  463 ccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    |||||||| ||||| || |||||||||||||||| | ||  |||||||||||||||||||| |||||||    
T  48352523 ccgactcatcaaagatggacgactaatccggctcgtgtgaggaggcatgtgcactggccaaacgttgtt 48352591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 448 - 523
Target Start/End: Complemental strand, 14567351 - 14567276
Alignment:
Q  448 ctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaa 523  Q
    |||||||| || || ||||| ||||||||| || ||||||||||||||| |  ||||||||||| |||||||||||    
T  14567351 ctttcgcaccgatttccgacccaccaaaggcgagcgactaatccggctcgtgcgtagaggcatgcgcactggccaa 14567276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 469 - 531
Target Start/End: Complemental strand, 3507361 - 3507299
Alignment:
Q  469 caccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    ||||||||||| |||||||||||||||| | |||||||||| | ||||| ||||| |||||||    
T  3507361 caccaaaggtggacgactaatccggctcgtgtgtagaggcacgcgcactagccaagcgttgtt 3507299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 457 - 523
Target Start/End: Complemental strand, 8889125 - 8889059
Alignment:
Q  457 cggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaa 523  Q
    ||||| ||||| ||||||||||| ||||||||||||||||||  |||||| |||| |||||| ||||    
T  8889125 cggtttccgacccaccaaaggtggacgactaatccggctcatgcgtagagccatgcgcactgcccaa 8889059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 449 - 523
Target Start/End: Complemental strand, 13073649 - 13073575
Alignment:
Q  449 tttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaa 523  Q
    ||||||| ||||| ||||| |||||||||| ||||||||||| || ||||  ||||||| ||| |||||||||||    
T  13073649 tttcgcaccggtttccgacccaccaaaggtaaacgactaatctggttcatgcgtagaggtatgcgcactggccaa 13073575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 469 - 531
Target Start/End: Original strand, 20532429 - 20532491
Alignment:
Q  469 caccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    |||||||||||  ||||| |||||||||||  ||||||||||| ||||||||||| |||||||    
T  20532429 caccaaaggtgggcgacttatccggctcatgcgtagaggcatgcgcactggccaagcgttgtt 20532491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 458 - 531
Target Start/End: Original strand, 40272340 - 40272413
Alignment:
Q  458 ggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    |||| ||||| |||||| |||||||||| |||||| || ||  ||||||||||| ||||||||||| |||||||    
T  40272340 ggtttccgacccaccaatggtgaacgacaaatccgacttatgcgtagaggcatgcgcactggccaagcgttgtt 40272413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 446 - 531
Target Start/End: Complemental strand, 50486057 - 50485972
Alignment:
Q  446 ggctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    |||||| ||||||||| ||||| ||| || ||||  ||||||||||||||| |  ||||||||||| |  ||||||||||||||||    
T  50486057 ggcttttgcatcggtttccgacccactaatggtgggcgactaatccggctcgtgcgtagaggcatgcgttctggccaatcgttgtt 50485972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 476 - 523
Target Start/End: Complemental strand, 1446910 - 1446863
Alignment:
Q  476 ggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaa 523  Q
    |||| ||||||||||||||||||  ||||||||||| |||||||||||    
T  1446910 ggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaa 1446863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 468 - 531
Target Start/End: Complemental strand, 7742017 - 7741954
Alignment:
Q  468 tcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    ||||||||| || |||||||||| || || |  ||||||||||||||||||||||| |||||||    
T  7742017 tcaccaaagatggacgactaatctggatcgtgcgtagaggcatgtgcactggccaagcgttgtt 7741954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 448 - 531
Target Start/End: Complemental strand, 30317345 - 30317262
Alignment:
Q  448 ctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    ||||| |||||||| ||||| |||||||||||  |||||||| |||||| |  ||||||||||  | ||||||||| |||||||    
T  30317345 ctttcacatcggtttccgacccaccaaaggtgggcgactaattcggctcgtgcgtagaggcattcgtactggccaagcgttgtt 30317262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 448 - 531
Target Start/End: Complemental strand, 43468459 - 43468376
Alignment:
Q  448 ctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    |||||||| ||||  ||||| |||||  ||||  |||||||||||||||||  ||||||  ||||||||||||||| |||||||    
T  43468459 ctttcgcaccggtctccgacccaccactggtgggcgactaatccggctcatgcgtagagaaatgtgcactggccaagcgttgtt 43468376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 482 - 528
Target Start/End: Original strand, 15839968 - 15840014
Alignment:
Q  482 cgactaatccggctcatatgtagaggcatgtgcactggccaatcgtt 528  Q
    |||||||||||||||||  ||||||||||| ||||||||||| ||||    
T  15839968 cgactaatccggctcatgcgtagaggcatgcgcactggccaaacgtt 15840014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 531
Target Start/End: Complemental strand, 33647832 - 33647750
Alignment:
Q  449 tttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    ||||||| ||||| ||||  |||||||| ||||||||||||| || || |  ||||||| ||||||||||| ||| |||||||    
T  33647832 tttcgcaccggtttccgatccaccaaagatgaacgactaatctggttcgtgcgtagaggaatgtgcactggtcaagcgttgtt 33647750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 484 - 522
Target Start/End: Complemental strand, 37194886 - 37194848
Alignment:
Q  484 actaatccggctcatatgtagaggcatgtgcactggcca 522  Q
    |||||||||||||||  ||||||||||||||||||||||    
T  37194886 actaatccggctcatgcgtagaggcatgtgcactggcca 37194848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 453 - 523
Target Start/End: Complemental strand, 46108798 - 46108728
Alignment:
Q  453 gcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaa 523  Q
    ||||||||| ||||| || |||| ||| |||||||||| |||||||  ||||||||||| ||||| |||||    
T  46108798 gcatcggtttccgacccatcaaaagtggacgactaatctggctcatgcgtagaggcatgcgcactagccaa 46108728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 446 - 531
Target Start/End: Complemental strand, 21192754 - 21192669
Alignment:
Q  446 ggctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    |||||||||| |||||  |||||||||||| |||  ||| ||||||| ||| |  ||||||||||| ||||||||| | |||||||    
T  21192754 ggctttcgcaccggttttcgactcaccaaatgtgggcgattaatccgactcgtgcgtagaggcatgcgcactggcccaacgttgtt 21192669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 450 - 531
Target Start/End: Complemental strand, 21429411 - 21429330
Alignment:
Q  450 ttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    |||||| ||||| ||||| ||||||||||| ||||||| || | ||| |  ||||||||||| |||||||| || |||||||    
T  21429411 ttcgcaccggtttccgacccaccaaaggtggacgactagtctgactcgtgcgtagaggcatgcgcactggctaaacgttgtt 21429330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 447 - 523
Target Start/End: Original strand, 15732446 - 15732522
Alignment:
Q  447 gctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaa 523  Q
    ||||||||| ||||| ||||  |||||||| ||| |||||||||  || | |  |||||||||||||||||||||||    
T  15732446 gctttcgcaccggtttccgatccaccaaagatgagcgactaatctagcccgtgcgtagaggcatgtgcactggccaa 15732522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 447 - 519
Target Start/End: Complemental strand, 17946602 - 17946530
Alignment:
Q  447 gctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactgg 519  Q
    ||||||||| |||||  |||||||||||| ||| || ||||||| | ||||| |||||| ||||| |||||||    
T  17946602 gctttcgcaacggttttcgactcaccaaaagtggacaactaatctgactcatgtgtagaagcatgcgcactgg 17946530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 447 - 531
Target Start/End: Complemental strand, 24166563 - 24166479
Alignment:
Q  447 gctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    ||||||||| ||||| ||||  || ||||||||   |||||||| ||||| |  ||||||||||| ||||||||||| |||||||    
T  24166563 gctttcgcaccggtttccgatccatcaaaggtgggtgactaatctggctcgtgcgtagaggcatgcgcactggccaaacgttgtt 24166479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 446 - 490
Target Start/End: Original strand, 25406560 - 25406604
Alignment:
Q  446 ggctttcgcatcggttcccgactcaccaaaggtgaacgactaatc 490  Q
    |||||||||| ||||| ||||| || |||||||||||||||||||    
T  25406560 ggctttcgcaccggtttccgacccatcaaaggtgaacgactaatc 25406604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 447 - 523
Target Start/End: Complemental strand, 29588849 - 29588773
Alignment:
Q  447 gctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaa 523  Q
    |||||||||||| || ||||| |||||| |||| |  ||||||||||||| |  ||||||||||| ||||| |||||    
T  29588849 gctttcgcatcgatttccgacccaccaatggtggataactaatccggctcgtgcgtagaggcatgcgcactagccaa 29588773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 448 - 531
Target Start/End: Original strand, 49952144 - 49952228
Alignment:
Q  448 ctttcgcatcggttcccgactcaccaaaggtgaa-cgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    |||||||| ||||| || || || |||||||||  |||||||||||||||||  |||||||| || |||||| |||| |||||||    
T  49952144 ctttcgcaccggtttccaacccatcaaaggtgacgcgactaatccggctcatgcgtagaggcgtgcgcactgaccaaacgttgtt 49952228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 99; Significance: 1e-48; HSPs: 52)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 19 - 141
Target Start/End: Original strand, 3000296 - 3000418
Alignment:
Q  19 catcacgtaatggtttgttttggttgtttgtatgattctaaatttgtagagtagctcttttggcacaccttgtgctagaagagttgcttttggtgattaa 118  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  3000296 catcacgtaatggtttgttttggttgtttgtatgactctaaatttgtagagtagttcttttggcacaccttgtgccagaagagttgcttttggtgattaa 3000395  T
Q  119 tttaatttcatttttgattgttg 141  Q
    | ||||| ||||||| |||||||    
T  3000396 tataattccattttttattgttg 3000418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 19 - 140
Target Start/End: Complemental strand, 7075704 - 7075583
Alignment:
Q  19 catcacgtaatggtttgttttggttgtttgtatgattctaaatttgtagagtagctcttttggcacaccttgtgctagaagagttgcttttggtgattaa 118  Q
    ||||||||||||||||||||||||||||||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  7075704 catcacgtaatggtttgttttggttgtttgtatgactctaattttgttgagtagctcttttggcacaccttgtgctagaagagttgcttttgatgattaa 7075605  T
Q  119 tttaatttcatttttgattgtt 140  Q
    | ||||| ||||||| ||||||    
T  7075604 tataattccattttttattgtt 7075583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 26 - 140
Target Start/End: Complemental strand, 9393122 - 9393007
Alignment:
Q  26 taatggtttgttttggttgtttgtatgattctaaatttgtagagtagctcttttggcacaccttgtgctagaagagttgcttttggtgattaattta-at 124  Q
    |||||||||||||||||||||||||||| ||||  |||||| ||||  |||||||||||||||||||||||| ||||||||||||||| ||||| || ||    
T  9393122 taatggtttgttttggttgtttgtatgactctatgtttgtaaagtatttcttttggcacaccttgtgctagaggagttgcttttggtggttaatatatat 9393023  T
Q  125 ttcatttttgattgtt 140  Q
    ||||||||| ||||||    
T  9393022 ttcattttttattgtt 9393007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 446 - 531
Target Start/End: Complemental strand, 7747383 - 7747298
Alignment:
Q  446 ggctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    |||||||||| ||||| ||||| ||| ||||||||||||||||||||||||||  |||||||||||  |||||||||| |||||||    
T  7747383 ggctttcgcaccggtttccgacccactaaaggtgaacgactaatccggctcatgcgtagaggcatgcacactggccaaacgttgtt 7747298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 446 - 531
Target Start/End: Complemental strand, 41220744 - 41220659
Alignment:
Q  446 ggctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    |||||||||| ||||| ||||| ||| ||||||||||||||||| ||||||||  ||||||||||| ||||||||||| |||||||    
T  41220744 ggctttcgcaccggtttccgacccactaaaggtgaacgactaattcggctcatgcgtagaggcatgcgcactggccaagcgttgtt 41220659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 447 - 531
Target Start/End: Original strand, 25540402 - 25540486
Alignment:
Q  447 gctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    ||||||||| ||||| ||||| ||||||||||| |||||||||||||||| |  ||||||||||| ||||||||||| |||||||    
T  25540402 gctttcgcaccggtttccgacccaccaaaggtggacgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgtt 25540486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 446 - 523
Target Start/End: Complemental strand, 22593242 - 22593166
Alignment:
Q  446 ggctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaa 523  Q
    |||||||||| ||||||| ||| ||||||||||| ||||||||||||||||||  ||||||||||| |||||||||||    
T  22593242 ggctttcgcaccggttcc-gacccaccaaaggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaa 22593166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 446 - 531
Target Start/End: Complemental strand, 38005511 - 38005426
Alignment:
Q  446 ggctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    |||||||||| | ||| ||||  |||||||||||  ||||||||||||||||| |||||||||||| ||||||||||| |||||||    
T  38005511 ggctttcgcaccagtttccgatccaccaaaggtgggcgactaatccggctcatgtgtagaggcatgcgcactggccaagcgttgtt 38005426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 447 - 531
Target Start/End: Original strand, 3643885 - 3643969
Alignment:
Q  447 gctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    ||||||||| ||||| ||| | ||||||||||| ||||||||||| ||||||  ||||||||||| ||||||||||| |||||||    
T  3643885 gctttcgcaacggtttccggcccaccaaaggtggacgactaatccagctcatgcgtagaggcatgcgcactggccaagcgttgtt 3643969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 469 - 531
Target Start/End: Complemental strand, 24179654 - 24179592
Alignment:
Q  469 caccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    |||||||| || ||||||||||||||||||  ||||||||||||||||||||||| |||||||    
T  24179654 caccaaagatggacgactaatccggctcatgcgtagaggcatgtgcactggccaaacgttgtt 24179592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 457 - 523
Target Start/End: Original strand, 39201516 - 39201582
Alignment:
Q  457 cggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaa 523  Q
    ||||| ||||| ||||||||||||||||||||||||||||||  |||||||||||  ||||||||||    
T  39201516 cggtttccgacccaccaaaggtgaacgactaatccggctcatgcgtagaggcatgcacactggccaa 39201582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 446 - 531
Target Start/End: Complemental strand, 10823169 - 10823084
Alignment:
Q  446 ggctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    |||||||||| ||||| ||||| ||| |||||||  ||||||||||||||| |  ||||||||||| ||||||||||| |||||||    
T  10823169 ggctttcgcaccggtttccgacccacaaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgtt 10823084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 446 - 531
Target Start/End: Complemental strand, 12455419 - 12455334
Alignment:
Q  446 ggctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    |||||||||| ||||| ||||| |||||| ||||| ||||||||||||||| |  ||||||||||| |||||||| || |||||||    
T  12455419 ggctttcgcaccggtttccgacccaccaatggtgagcgactaatccggctcgtgcgtagaggcatgcgcactggctaagcgttgtt 12455334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 463 - 531
Target Start/End: Original strand, 10026630 - 10026698
Alignment:
Q  463 ccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    ||||| |||||||||||  |||||||||||||||||  ||||||||||| ||||||||||| |||||||    
T  10026630 ccgacccaccaaaggtggtcgactaatccggctcatgcgtagaggcatgcgcactggccaaacgttgtt 10026698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 448 - 531
Target Start/End: Complemental strand, 38962870 - 38962787
Alignment:
Q  448 ctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    |||||||| | ||| | ||| ||||||||||| ||||||||||||| ||||  ||||||||||| ||||||||||| |||||||    
T  38962870 ctttcgcaccagtttctgacccaccaaaggtggacgactaatccggttcatgcgtagaggcatgcgcactggccaagcgttgtt 38962787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 446 - 531
Target Start/End: Original strand, 2528338 - 2528423
Alignment:
Q  446 ggctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    |||||||||| | ||| ||||||||| |||| ||| |||||||||||||| || ||||||||||||  ||||| |||| |||||||    
T  2528338 ggctttcgcaccagtttccgactcactaaagatgagcgactaatccggcttatgtgtagaggcatgcacactgaccaagcgttgtt 2528423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 446 - 531
Target Start/End: Original strand, 20116609 - 20116694
Alignment:
Q  446 ggctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    |||||||||| ||||| ||||| || |||||||| ||| ||||||||||||||  ||||||||||| ||| ||||||  |||||||    
T  20116609 ggctttcgcaccggtttccgacccatcaaaggtggacggctaatccggctcatgcgtagaggcatgcgcattggccatgcgttgtt 20116694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 60 - 140
Target Start/End: Original strand, 22295919 - 22296000
Alignment:
Q  60 atttgtagagtagctcttttggcacaccttgtgctagaagagttgcttttggtgattaattta-atttcatttttgattgtt 140  Q
    ||||||| ||||| ||||||||||||||||||| |||| || ||||||||  || ||||| || ||||||||||||||||||    
T  22295919 atttgtaaagtagttcttttggcacaccttgtgttagaggaattgcttttaatggttaatatatatttcatttttgattgtt 22296000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 446 - 523
Target Start/End: Complemental strand, 26805405 - 26805328
Alignment:
Q  446 ggctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaa 523  Q
    |||||| |||||||||  |||  |||||||||||  ||||||||||| |||||  |||||||||||||||||||||||    
T  26805405 ggcttttgcatcggttttcgagccaccaaaggtgggcgactaatccgactcatgcgtagaggcatgtgcactggccaa 26805328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 96 - 140
Target Start/End: Complemental strand, 1379614 - 1379570
Alignment:
Q  96 gaagagttgcttttggtgattaatttaatttcatttttgattgtt 140  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||    
T  1379614 gaagagttgcttttggtgattaatataattccatttttgattgtt 1379570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 447 - 531
Target Start/End: Complemental strand, 11069986 - 11069902
Alignment:
Q  447 gctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    ||||||||||||||| ||||| |||||| |||| ||||||||| | |||| |  ||||||| ||| ||||||||||| |||||||    
T  11069986 gctttcgcatcggtttccgacccaccaacggtggacgactaattcagctcgtgcgtagaggtatgcgcactggccaaacgttgtt 11069902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 447 - 523
Target Start/End: Complemental strand, 16325703 - 16325627
Alignment:
Q  447 gctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaa 523  Q
    ||||||||| ||||| ||||| |||||| |||| |||||||||| |||||||  |||||||||||  ||||||||||    
T  16325703 gctttcgcaccggtttccgacccaccaatggtggacgactaatctggctcatgcgtagaggcatgcacactggccaa 16325627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 447 - 531
Target Start/End: Original strand, 42770649 - 42770733
Alignment:
Q  447 gctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    ||||| |||||||||  |||| ||||||||||| |||| ||||||||||| |  | ||||||||| ||||||||||| |||||||    
T  42770649 gcttttgcatcggttttcgacccaccaaaggtggacgattaatccggctcgtgcgaagaggcatgcgcactggccaagcgttgtt 42770733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 464 - 523
Target Start/End: Original strand, 6358166 - 6358225
Alignment:
Q  464 cgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaa 523  Q
    |||| |||||| |||| ||||||||||||||||||  ||||||||||| |||||||||||    
T  6358166 cgacccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaa 6358225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 448 - 531
Target Start/End: Complemental strand, 16035044 - 16034961
Alignment:
Q  448 ctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    |||||||| ||||| |||||||| ||| ||||| ||||||||||||||| || ||| |||||||  |||||| ||| |||||||    
T  16035044 ctttcgcaccggtttccgactcatcaatggtgagcgactaatccggctcgtacgtataggcatgcacactggtcaagcgttgtt 16034961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 448 - 523
Target Start/End: Complemental strand, 33005858 - 33005783
Alignment:
Q  448 ctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaa 523  Q
    |||||||||||||| ||||| ||| |||||||| ||| ||||| | |||||  ||||||||||| |||||||||||    
T  33005858 ctttcgcatcggtttccgacccactaaaggtgagcgattaatctgcctcatgcgtagaggcatgcgcactggccaa 33005783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 457 - 531
Target Start/End: Complemental strand, 10669690 - 10669616
Alignment:
Q  457 cggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    ||||| ||||| |||||||||||||||| ||||||| ||| |  |||||| |||| ||||||||||| |||||||    
T  10669690 cggtttccgacccaccaaaggtgaacgattaatccgactcgtgcgtagagacatgcgcactggccaagcgttgtt 10669616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 469 - 531
Target Start/End: Original strand, 39806905 - 39806967
Alignment:
Q  469 caccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    ||||||||||| | |||||||||| ||| | |||||||||||| ||||||||||| |||||||    
T  39806905 caccaaaggtggatgactaatccgactcgtgtgtagaggcatgcgcactggccaaacgttgtt 39806967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 1379674 - 1379614
Alignment:
Q  19 catcacgtaatggtttgttttggttgtttgtatgattctaaatttgtagagtagctcttttg 80  Q
    |||||||||||||||||||| |||||||||| ||| |||  ||||||||||||| |||||||    
T  1379674 catcacgtaatggtttgttt-ggttgtttgtttgactctttatttgtagagtagttcttttg 1379614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 446 - 511
Target Start/End: Original strand, 3811688 - 3811753
Alignment:
Q  446 ggctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatg 511  Q
    |||||||||||||||| | ||| |||||||||||  ||| |||||||||||||  |||||||||||    
T  3811688 ggctttcgcatcggtttctgacccaccaaaggtgggcgagtaatccggctcatgcgtagaggcatg 3811753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 446 - 523
Target Start/End: Complemental strand, 8410240 - 8410163
Alignment:
Q  446 ggctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaa 523  Q
    |||||||||| ||||| ||||| | ||||| |||  ||||||||||||||| |  ||||||||||| |||||||||||    
T  8410240 ggctttcgcaccggtttccgaccccccaaaagtgggcgactaatccggctcgtgcgtagaggcatgcgcactggccaa 8410163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 446 - 531
Target Start/End: Original strand, 13026408 - 13026493
Alignment:
Q  446 ggctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    |||||| ||||||||| | |||  |||||| |||   ||||||||||||||||  ||||||||||| ||||||||||||| |||||    
T  13026408 ggcttttgcatcggtttctgacctaccaaaagtggctgactaatccggctcatgcgtagaggcatgcgcactggccaatcattgtt 13026493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 446 - 523
Target Start/End: Original strand, 34346284 - 34346361
Alignment:
Q  446 ggctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaa 523  Q
    |||||||||| ||||| ||||| |||||||||||| ||| ||||| | |||||  |||||||||||  ||||||||||    
T  34346284 ggctttcgcaccggtttccgacccaccaaaggtgagcgattaatctgactcatgcgtagaggcatgcacactggccaa 34346361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 26 - 113
Target Start/End: Original strand, 24313978 - 24314066
Alignment:
Q  26 taatggtttgttttggttgtttgtat-gattctaaatttgtagagtagctcttttggcacaccttgtgctagaagagttgcttttggtg 113  Q
    ||||||||||| |||||||||||| | || |||   |||||| ||||  || ||| ||||||||||||||||| |||||||||||||||    
T  24313978 taatggtttgtattggttgtttgttttgactctgtttttgtaaagtaattcgtttagcacaccttgtgctagaggagttgcttttggtg 24314066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 447 - 531
Target Start/End: Complemental strand, 44139592 - 44139508
Alignment:
Q  447 gctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    ||||||||| ||||| ||||| |||||  ||||  ||||||||||||||| |  ||||||||| | ||||||||||| |||||||    
T  44139592 gctttcgcaccggtttccgacccaccattggtgggcgactaatccggctcgtgcgtagaggcacgcgcactggccaagcgttgtt 44139508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 448 - 531
Target Start/End: Original strand, 9360747 - 9360830
Alignment:
Q  448 ctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    |||||||| ||||| ||| | ||| |||||||  |||||||| |||||| |  ||||||||||| ||||||||||| |||||||    
T  9360747 ctttcgcaccggtttccggcccactaaaggtgggcgactaattcggctcgtgcgtagaggcatgcgcactggccaaacgttgtt 9360830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 463 - 518
Target Start/End: Original strand, 10046491 - 10046546
Alignment:
Q  463 ccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactg 518  Q
    ||||| |||||||||||  |||||||||||||||||  ||||||||||| ||||||    
T  10046491 ccgacccaccaaaggtggtcgactaatccggctcatgcgtagaggcatgcgcactg 10046546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 448 - 519
Target Start/End: Original strand, 14169608 - 14169679
Alignment:
Q  448 ctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactgg 519  Q
    |||||||| ||||| ||||| |||||| |||  ||||||||||||||||||  |||||| |||| |||||||    
T  14169608 ctttcgcaccggtttccgacccaccaatggtagacgactaatccggctcatgcgtagagacatgcgcactgg 14169679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 448 - 523
Target Start/End: Original strand, 18649025 - 18649100
Alignment:
Q  448 ctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaa 523  Q
    |||||||| ||||| || || ||||||| |||| ||||||||||| |||||  ||||||||||| |||||| ||||    
T  18649025 ctttcgcaacggtttccaacccaccaaaagtgagcgactaatccgactcatgcgtagaggcatgcgcactgcccaa 18649100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 74 - 140
Target Start/End: Original strand, 18704397 - 18704464
Alignment:
Q  74 tcttttggcacaccttgtgctagaagagttgcttttggtgattaattta-atttcatttttgattgtt 140  Q
    |||||||||||| ||||||||||| |||||||||||| || ||||| || ||| ||||||| ||||||    
T  18704397 tcttttggcacatcttgtgctagacgagttgcttttgatggttaatatatattccattttttattgtt 18704464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 449 - 523
Target Start/End: Original strand, 20612534 - 20612609
Alignment:
Q  449 tttcgcatcggttcccgactcaccaaaggtgaacgactaat-ccggctcatatgtagaggcatgtgcactggccaa 523  Q
    ||||||| ||||| ||||| |||||| |||| ||||||||| |||||||||   |||||||||| |||||||||||    
T  20612534 tttcgcaccggtttccgacccaccaatggtggacgactaatcccggctcatgcatagaggcatgcgcactggccaa 20612609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 448 - 531
Target Start/End: Complemental strand, 35946845 - 35946762
Alignment:
Q  448 ctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    |||||||| | ||| ||||| |||||| |||| |||||||||||||||| |  |||||||||||  || ||||||| |||||||    
T  35946845 ctttcgcaccagtttccgacccaccaatggtggacgactaatccggctcgtgcgtagaggcatgcacaatggccaagcgttgtt 35946762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 448 - 531
Target Start/End: Complemental strand, 44773370 - 44773287
Alignment:
Q  448 ctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    |||||||| ||||| ||||| || ||||||||| ||||||||||||||||     |||||||||  |||||||||| |||||||    
T  44773370 ctttcgcaccggtttccgacccatcaaaggtgagcgactaatccggctcacgcacagaggcatgcacactggccaaacgttgtt 44773287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 464 - 531
Target Start/End: Original strand, 45263682 - 45263749
Alignment:
Q  464 cgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    |||| |||||||| ||| ||| ||||||||||| |  ||||||||||| ||||||||||| |||||||    
T  45263682 cgacccaccaaagatgagcgattaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgtt 45263749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 469 - 523
Target Start/End: Complemental strand, 331587 - 331533
Alignment:
Q  469 caccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaa 523  Q
    |||||||||||  |||||||||||||||||  ||||| ||||| |||||||||||    
T  331587 caccaaaggtgggcgactaatccggctcatgcgtagaagcatgcgcactggccaa 331533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 26 - 107
Target Start/End: Complemental strand, 30273585 - 30273503
Alignment:
Q  26 taatggtttgttttggttgtttgtat-gattctaaatttgtagagtagctcttttggcacaccttgtgctagaagagttgctt 107  Q
    ||||||||||| |||||||||||| | || |||   |||||| ||||  |||||| ||||||||||||||||| |||||||||    
T  30273585 taatggtttgtattggttgtttgttttgactctgtttttgtaaagtaattcttttagcacaccttgtgctagaggagttgctt 30273503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 482 - 523
Target Start/End: Original strand, 21180347 - 21180388
Alignment:
Q  482 cgactaatccggctcatatgtagaggcatgtgcactggccaa 523  Q
    ||||||||||||||| |  |||||||||||||||||||||||    
T  21180347 cgactaatccggctcgtgcgtagaggcatgtgcactggccaa 21180388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 446 - 531
Target Start/End: Complemental strand, 34722789 - 34722704
Alignment:
Q  446 ggctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    |||||||||| ||||| | ||  || ||||||||  ||||||||||||||| |  |||||| ||||||||||| |||| |||||||    
T  34722789 ggctttcgcaccggtttctgatccatcaaaggtgggcgactaatccggctcgtgcgtagagacatgtgcactgaccaagcgttgtt 34722704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 446 - 531
Target Start/End: Complemental strand, 37560282 - 37560197
Alignment:
Q  446 ggctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    ||||||| || |||||  |||| || |||||||| |||| ||||||||||| |  ||||||||||| |||||| |||| |||||||    
T  37560282 ggctttcacaccggttttcgacccatcaaaggtggacgattaatccggctcgtgcgtagaggcatgcgcactgaccaaacgttgtt 37560197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 446 - 531
Target Start/End: Complemental strand, 44945702 - 44945617
Alignment:
Q  446 ggctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    |||||||||| ||||| ||||  ||| |||||||  ||||||||||||||| |  ||||||||||| |||||  |||| |||||||    
T  44945702 ggctttcgcaccggtttccgatccactaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactatccaagcgttgtt 44945617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 447 - 531
Target Start/End: Original strand, 18902528 - 18902612
Alignment:
Q  447 gctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    ||||||||| ||||| ||||| |||||||||||  ||||||||| ||||| |  |||||| || | ||||||| ||| |||||||    
T  18902528 gctttcgcaccggtttccgacccaccaaaggtgggcgactaatctggctcgtgcgtagagacacgcgcactggtcaagcgttgtt 18902612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 447 - 523
Target Start/End: Original strand, 41031904 - 41031980
Alignment:
Q  447 gctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaa 523  Q
    |||||||||  |||| ||||| |||||||||||   |||||||||||||| |  |||||||||||  ||||||||||    
T  41031904 gctttcgcactggtttccgacccaccaaaggtgggtgactaatccggctcgtgcgtagaggcatgcacactggccaa 41031980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 98; Significance: 5e-48; HSPs: 55)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 19 - 140
Target Start/End: Complemental strand, 17707588 - 17707467
Alignment:
Q  19 catcacgtaatggtttgttttggttgtttgtatgattctaaatttgtagagtagctcttttggcacaccttgtgctagaagagttgcttttggtgattaa 118  Q
    ||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||    
T  17707588 catcacgtaatggtttgttttggttgtttgtatgactctaagtttgtagagtagctcttttagcacaccttgtgctagaagagttgcttgtggtgattaa 17707489  T
Q  119 tttaatttcatttttgattgtt 140  Q
    | ||||||| ||||||||||||    
T  17707488 tataatttcttttttgattgtt 17707467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 19 - 140
Target Start/End: Original strand, 40292633 - 40292753
Alignment:
Q  19 catcacgtaatggtttgttttggttgtttgtatgattctaaatttgtagagtagctcttttggcacaccttgtgctagaagagttgcttttggtgattaa 118  Q
    |||||||||||||||||||| |||||||||| ||| |||  ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  40292633 catcacgtaatggtttgttt-ggttgtttgtttgactctttatttgtagagtagttcttttggcacaccttgtgctagaagagttgcttttggtgattaa 40292731  T
Q  119 tttaatttcatttttgattgtt 140  Q
    | ||||| ||||||||||||||    
T  40292732 tataattccatttttgattgtt 40292753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 19 - 140
Target Start/End: Complemental strand, 10722629 - 10722510
Alignment:
Q  19 catcacgtaatggtttgttttggttgtttgtatgattctaaatttgtagagtagctcttttggcacaccttgtgctagaagagttgcttttggtgattaa 118  Q
    |||| |||||||||||||||||||||||||||||| | ||  |||||| ||||| |||||||||||||||||||||||||||||||||||||||| ||||    
T  10722629 catcgcgtaatggtttgttttggttgtttgtatgactgta--tttgtaaagtagttcttttggcacaccttgtgctagaagagttgcttttggtggttaa 10722532  T
Q  119 tttaatttcatttttgattgtt 140  Q
    | ||||| |||||||| |||||    
T  10722531 tataattccatttttgtttgtt 10722510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 19 - 140
Target Start/End: Original strand, 9903813 - 9903934
Alignment:
Q  19 catcacgtaatggtttgttttggttgtttgtatgattctaaatttgtagagtagctcttttggcacaccttgtgctagaagagttgcttttggtgattaa 118  Q
    |||| |||||||||||||||||||||||||||||| |||   |||||||||||| |||||| ||||||||||| ||||||||||||||||||||| ||||    
T  9903813 catcgcgtaatggtttgttttggttgtttgtatgactctgtgtttgtagagtagttcttttagcacaccttgtactagaagagttgcttttggtggttaa 9903912  T
Q  119 tttaatttcatttttgattgtt 140  Q
      ||||| ||||||||||||||    
T  9903913 cataattccatttttgattgtt 9903934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 42 - 140
Target Start/End: Original strand, 10711675 - 10711773
Alignment:
Q  42 ttgtttgtatgattctaaatttgtagagtagctcttttggcacaccttgtgctagaagagttgcttttggtgattaatttaatttcatttttgattgtt 140  Q
    |||||||||||| |||  ||||||| ||||| |||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  10711675 ttgtttgtatgactctgtatttgtaaagtagttcttttggcacaccttgtgctagaagagttgcttttggtggttaatataatttcatttttgattgtt 10711773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 25 - 140
Target Start/End: Original strand, 30111478 - 30111593
Alignment:
Q  25 gtaatggtttgttttggttgtttgtatgattctaaatttgtagagtagctcttttggcacaccttgtgctagaagagttgcttttggtgattaatttaat 124  Q
    ||||||||||| ||| ||||||||||||| ||||   ||||| ||||| ||||||||||||||||||||||||||||||| ||||| |||||||| ||||    
T  30111478 gtaatggtttgctttagttgtttgtatgactctatggttgtaaagtagttcttttggcacaccttgtgctagaagagttgtttttgatgattaatataat 30111577  T
Q  125 ttcatttttgattgtt 140  Q
    | ||||||||||||||    
T  30111578 tccatttttgattgtt 30111593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 31 - 140
Target Start/End: Original strand, 25592034 - 25592143
Alignment:
Q  31 gtttgttttggttgtttgtatgattctaaatttgtagagtagctcttttggcacaccttgtgctagaagagttgcttttggtgattaatttaatttcatt 130  Q
    |||||||||||||| |||||| | |||  ||||||| ||||| |||| ||||||||||||||||||||||||||||||||||| ||||| ||||| ||||    
T  25592034 gtttgttttggttggttgtataactctgtatttgtaaagtagttcttgtggcacaccttgtgctagaagagttgcttttggtggttaatataattccatt 25592133  T
Q  131 tttgattgtt 140  Q
    |||| |||||    
T  25592134 tttgtttgtt 25592143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 19 - 140
Target Start/End: Complemental strand, 49968919 - 49968797
Alignment:
Q  19 catcacgtaatggtttgttttggttgtttgtatgattctaaatttgtagagtagctcttttggcacaccttgtgctagaagagttgcttttggtgattaa 118  Q
    |||| ||||||||||| || ||||||||||||||| |||   |||||| |||||||||||| |||||||||||||||||  |||||||||||||| ||||    
T  49968919 catcgcgtaatggtttcttatggttgtttgtatgactctgtgtttgtaaagtagctcttttagcacaccttgtgctagagaagttgcttttggtggttaa 49968820  T
Q  119 t-ttaatttcatttttgattgtt 140  Q
    | | |||| ||||||||||||||    
T  49968819 tataaattccatttttgattgtt 49968797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 447 - 531
Target Start/End: Complemental strand, 5855631 - 5855547
Alignment:
Q  447 gctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    ||||||||||||||| ||||| ||| |||||||||||||||||||| |||||  ||||||||||| ||||||||||| |||||||    
T  5855631 gctttcgcatcggtttccgacccactaaaggtgaacgactaatccgcctcatgcgtagaggcatgcgcactggccaagcgttgtt 5855547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 74 - 140
Target Start/End: Original strand, 1395037 - 1395103
Alignment:
Q  74 tcttttggcacaccttgtgctagaagagttgcttttggtgattaatttaatttcatttttgattgtt 140  Q
    ||||||||||||||||||||||||||||||| |||||||| ||||| ||||| ||||||||||||||    
T  1395037 tcttttggcacaccttgtgctagaagagttgtttttggtggttaatataattccatttttgattgtt 1395103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 447 - 523
Target Start/End: Complemental strand, 10422897 - 10422821
Alignment:
Q  447 gctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaa 523  Q
    ||||||||| ||||| |||||| |||||||||| ||||||||||||||||||  ||||||||||| |||||||||||    
T  10422897 gctttcgcaccggtttccgacttaccaaaggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaa 10422821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 61 - 140
Target Start/End: Original strand, 47107254 - 47107334
Alignment:
Q  61 tttgtagagtagctcttttggcacaccttgtgctagaagagttgcttttggtgattaattta-atttcatttttgattgtt 140  Q
    |||||||||||| |||||||||||||||||| ||||| ||||||||||||||  ||||| || ||||||||||||||||||    
T  47107254 tttgtagagtagttcttttggcacaccttgtactagaggagttgcttttggtagttaatatatatttcatttttgattgtt 47107334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 446 - 523
Target Start/End: Complemental strand, 49078224 - 49078147
Alignment:
Q  446 ggctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaa 523  Q
    |||||||||| ||||| |||||  ||||| |||||||||||||||||||||||  ||||||||||| |||||||||||    
T  49078224 ggctttcgcaccggtttccgacctaccaatggtgaacgactaatccggctcatgcgtagaggcatgcgcactggccaa 49078147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 447 - 531
Target Start/End: Original strand, 10172970 - 10173054
Alignment:
Q  447 gctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    ||||||||| ||||| ||||| |||||||||||  ||| |||||||||||||  ||||||||||| ||||||||||| |||||||    
T  10172970 gctttcgcaccggtttccgacccaccaaaggtgggcgagtaatccggctcatgcgtagaggcatgggcactggccaagcgttgtt 10173054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 61 - 140
Target Start/End: Original strand, 41061735 - 41061814
Alignment:
Q  61 tttgtagagtagctcttttggcacaccttgtgctagaagagttgcttttggtgattaattta-atttcatttttgattgtt 140  Q
    |||||||||||  |||||| ||||||||||||||||||||||||||||||||| ||||| || ||| ||||||||||||||    
T  41061735 tttgtagagtaattcttttagcacaccttgtgctagaagagttgcttttggtg-ttaatatatattccatttttgattgtt 41061814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 447 - 531
Target Start/End: Original strand, 45361881 - 45361965
Alignment:
Q  447 gctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    ||||||||| ||||| ||||| ||| ||||||||||||||||||||||| ||  |||| |||||| ||||||||||| |||||||    
T  45361881 gctttcgcaccggtttccgacccactaaaggtgaacgactaatccggcttatgcgtagtggcatgcgcactggccaagcgttgtt 45361965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 446 - 523
Target Start/End: Complemental strand, 8764101 - 8764024
Alignment:
Q  446 ggctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaa 523  Q
    |||||||||| ||||| ||||| |||||| |||| |||||||||||||||| |  ||||||||||| |||||||||||    
T  8764101 ggctttcgcaccggtttccgacccaccaacggtggacgactaatccggctcgtgcgtagaggcatgcgcactggccaa 8764024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 446 - 523
Target Start/End: Original strand, 17642002 - 17642079
Alignment:
Q  446 ggctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaa 523  Q
    |||||||||| | ||| ||||| ||||||||||| |||||||||||||||| |  ||||||||||| |||||||||||    
T  17642002 ggctttcgcaccagtttccgacccaccaaaggtggacgactaatccggctcgtgcgtagaggcatgcgcactggccaa 17642079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 446 - 523
Target Start/End: Complemental strand, 26325922 - 26325845
Alignment:
Q  446 ggctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaa 523  Q
    |||||||||| ||||| ||||| |||||| |||| ||||||||||||||||||  ||||||||||| |||||| ||||    
T  26325922 ggctttcgcaccggtttccgacccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcactgaccaa 26325845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 447 - 523
Target Start/End: Original strand, 4581681 - 4581757
Alignment:
Q  447 gctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaa 523  Q
    ||||||||| ||||| ||||| ||||||||||| ||||||| |||||||| |  ||||||||||| |||||||||||    
T  4581681 gctttcgcaccggtttccgacccaccaaaggtggacgactattccggctcgtgcgtagaggcatgcgcactggccaa 4581757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 447 - 523
Target Start/End: Original strand, 32142845 - 32142921
Alignment:
Q  447 gctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaa 523  Q
    ||||||||||||||| ||||| || ||||||||| |||||||| ||||||||  ||| ||||||| |||||||||||    
T  32142845 gctttcgcatcggtttccgacccatcaaaggtgagcgactaattcggctcatgcgtaaaggcatgcgcactggccaa 32142921  T

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Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 446 - 528
Target Start/End: Original strand, 25178574 - 25178656
Alignment:
Q  446 ggctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgtt 528  Q
    |||||||| |||||||  |||| ||| |||||||||||||||||||||||  | |||||||| ||| ||||||||||| ||||    
T  25178574 ggctttcgtatcggttttcgacccactaaaggtgaacgactaatccggcttgtctgtagaggtatgcgcactggccaagcgtt 25178656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 448 - 517
Target Start/End: Complemental strand, 5504139 - 5504070
Alignment:
Q  448 ctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcact 517  Q
    |||||| | ||||| ||||| || |||||||| ||||||||||||||||||  |||||||||||||||||    
T  5504139 ctttcgtaccggtttccgacccatcaaaggtggacgactaatccggctcatgcgtagaggcatgtgcact 5504070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 472 - 529
Target Start/End: Original strand, 33498863 - 33498920
Alignment:
Q  472 caaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttg 529  Q
    |||||||| ||||||||||||||||||  ||||||||||| ||||||||||| |||||    
T  33498863 caaaggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttg 33498920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 446 - 523
Target Start/End: Original strand, 41663854 - 41663931
Alignment:
Q  446 ggctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaa 523  Q
    |||||||||| ||||| ||||| |||||| |||| ||||||||||| ||||||  ||||||||||| |||||| ||||    
T  41663854 ggctttcgcaccggtttccgacccaccaatggtggacgactaatccagctcatgcgtagaggcatgcgcactgaccaa 41663931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 446 - 531
Target Start/End: Original strand, 43959819 - 43959904
Alignment:
Q  446 ggctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    |||||||||| ||||| ||||  ||| |||||||  ||||||||||||||| |  ||||||||||| ||||||||||| |||||||    
T  43959819 ggctttcgcaccggtttccgatccactaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgtt 43959904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 447 - 531
Target Start/End: Original strand, 9659178 - 9659262
Alignment:
Q  447 gctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    ||||||||| ||||| || || ||||||||||| ||||||||||||||||||  ||| ||||||| ||||| | ||| |||||||    
T  9659178 gctttcgcaccggtttccaacccaccaaaggtggacgactaatccggctcatgcgtaaaggcatgcgcactagtcaaacgttgtt 9659262  T

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Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 447 - 531
Target Start/End: Original strand, 11397888 - 11397972
Alignment:
Q  447 gctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    ||||||||| || || ||||| ||||||||||| |||||||||||| |||||  ||||||||||  ||| ||||||| |||||||    
T  11397888 gctttcgcaccgatttccgacccaccaaaggtggacgactaatccgactcatgcgtagaggcatacgcattggccaaacgttgtt 11397972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 447 - 531
Target Start/End: Complemental strand, 15466074 - 15465990
Alignment:
Q  447 gctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    ||||||| ||||||| ||||| |||||||||||| |||| |||| | ||| |  |||||||||||||||||| |||| |||||||    
T  15466074 gctttcgtatcggtttccgacccaccaaaggtgagcgaccaatcagactcgtgcgtagaggcatgtgcactgaccaagcgttgtt 15465990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 447 - 531
Target Start/End: Complemental strand, 16956575 - 16956491
Alignment:
Q  447 gctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    |||||||||  |||| ||||| ||||||||||||  |||||||||||||| |  ||||||||||| ||||||| ||| |||||||    
T  16956575 gctttcgcactggtttccgacccaccaaaggtgagtgactaatccggctcgtgcgtagaggcatgcgcactggtcaaacgttgtt 16956491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 446 - 530
Target Start/End: Complemental strand, 37339930 - 37339846
Alignment:
Q  446 ggctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgt 530  Q
    |||||||||| ||||| || || |||||||||||  ||||||||||||||| |  || |||||||| ||||||||||| ||||||    
T  37339930 ggctttcgcaccggtttccaacccaccaaaggtgggcgactaatccggctcgtgcgttgaggcatgcgcactggccaagcgttgt 37339846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 447 - 531
Target Start/End: Original strand, 46929737 - 46929821
Alignment:
Q  447 gctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    |||||||||||||||  |||  || |||| ||| |||||||||||||||||| ||| |||||||| ||| ||||||| |||||||    
T  46929737 gctttcgcatcggttttcgatccatcaaaagtggacgactaatccggctcatgtgtggaggcatgcgcattggccaagcgttgtt 46929821  T

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Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 469 - 523
Target Start/End: Original strand, 45726454 - 45726508
Alignment:
Q  469 caccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaa 523  Q
    ||||||||||||||||||||||||||||||  |||||| |||  |||||||||||    
T  45726454 caccaaaggtgaacgactaatccggctcatgcgtagagacatacgcactggccaa 45726508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 446 - 531
Target Start/End: Complemental strand, 10507808 - 10507723
Alignment:
Q  446 ggctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    |||||||| || |||| ||||| |||||  |||| ||||||||||||||||||  ||||||| |||  |||||||||| |||||||    
T  10507808 ggctttcgaattggtttccgacccaccagtggtggacgactaatccggctcatgcgtagaggtatgcacactggccaaacgttgtt 10507723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 458 - 531
Target Start/End: Original strand, 14254278 - 14254351
Alignment:
Q  458 ggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    |||| ||||| || |||||||| ||||||||||||||||||  ||| ||||||| | ||||||||| |||||||    
T  14254278 ggtttccgacccatcaaaggtggacgactaatccggctcatgcgtaaaggcatgcgtactggccaagcgttgtt 14254351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 470 - 531
Target Start/End: Original strand, 17092499 - 17092560
Alignment:
Q  470 accaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    |||||||||| |||||||||||||||| |  ||||||||||   ||||||||||||||||||    
T  17092499 accaaaggtggacgactaatccggctcgtgcgtagaggcatacacactggccaatcgttgtt 17092560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 446 - 523
Target Start/End: Original strand, 18708538 - 18708615
Alignment:
Q  446 ggctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaa 523  Q
    |||||| |||||||||  | || || ||||||||| ||||||||| ||||||| |||||||||||| ||||| |||||    
T  18708538 ggctttagcatcggttttcaacccatcaaaggtgagcgactaatctggctcatgtgtagaggcatgcgcactagccaa 18708615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 446 - 523
Target Start/End: Complemental strand, 18915977 - 18915900
Alignment:
Q  446 ggctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaa 523  Q
    |||||||||| ||||| || || |||||| ||||| ||||||||||||||| |  |||||||||||  ||||||||||    
T  18915977 ggctttcgcaccggtttccaacccaccaatggtgagcgactaatccggctcgtgcgtagaggcatgcacactggccaa 18915900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 447 - 531
Target Start/End: Complemental strand, 32980 - 32896
Alignment:
Q  447 gctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    ||||||| ||||||| ||||  || |||| ||  ||||||||| ||||||||  |||||||||||||||||| |||| |||||||    
T  32980 gctttcgtatcggtttccgatccatcaaaagtagacgactaattcggctcatgcgtagaggcatgtgcactgaccaagcgttgtt 32896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 447 - 511
Target Start/End: Complemental strand, 26660246 - 26660183
Alignment:
Q  447 gctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatg 511  Q
    ||||||||| ||||| ||||| |||||||||||  |||||||||||||||||  |||||||||||    
T  26660246 gctttcgcaccggtttccgacccaccaaaggtgg-cgactaatccggctcatgcgtagaggcatg 26660183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 447 - 531
Target Start/End: Original strand, 30927726 - 30927810
Alignment:
Q  447 gctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    ||||| ||| ||||| | ||| ||||||| ||| ||||||||||||||||||  |||||||||||  || ||||||| |||||||    
T  30927726 gcttttgcaccggtttctgacccaccaaaagtggacgactaatccggctcatgcgtagaggcatgcacattggccaagcgttgtt 30927810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 447 - 523
Target Start/End: Original strand, 32150921 - 32150997
Alignment:
Q  447 gctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaa 523  Q
    |||||||||||||||  |||| || ||||||||| |||||||| ||||||||  ||| ||||||| |||||| ||||    
T  32150921 gctttcgcatcggttttcgacccatcaaaggtgagcgactaattcggctcatgcgtaaaggcatgcgcactgaccaa 32150997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 470 - 530
Target Start/End: Original strand, 33418137 - 33418197
Alignment:
Q  470 accaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgt 530  Q
    |||||||||| |||||||||||||||| |   |||||||||| ||||||||||| ||||||    
T  33418137 accaaaggtggacgactaatccggctcgtgcatagaggcatgcgcactggccaagcgttgt 33418197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 472 - 531
Target Start/End: Complemental strand, 10336600 - 10336541
Alignment:
Q  472 caaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    |||||||| |||| |||||||||||||  ||||||||||| ||||||| ||| |||||||    
T  10336600 caaaggtggacgattaatccggctcatgcgtagaggcatgcgcactggtcaagcgttgtt 10336541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 448 - 531
Target Start/End: Complemental strand, 16263653 - 16263570
Alignment:
Q  448 ctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    |||||||| ||||| ||||  || |||| ||| ||||||| ||||||| ||  ||||||||||| ||||||||||| |||||||    
T  16263653 ctttcgcaccggtttccgatccatcaaaagtggacgactattccggcttatgcgtagaggcatgcgcactggccaagcgttgtt 16263570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 472 - 531
Target Start/End: Original strand, 38791634 - 38791693
Alignment:
Q  472 caaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    ||||| || ||||||||| ||||||||  ||||||||||| ||||| |||||||||||||    
T  38791634 caaagatggacgactaattcggctcatgcgtagaggcatgcgcacttgccaatcgttgtt 38791693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 447 - 498
Target Start/End: Complemental strand, 51437566 - 51437515
Alignment:
Q  447 gctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcat 498  Q
    ||||||||| ||||| ||||| ||||||||||| | ||||||||||||||||    
T  51437566 gctttcgcaccggtttccgacccaccaaaggtggatgactaatccggctcat 51437515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 446 - 528
Target Start/End: Complemental strand, 34719886 - 34719804
Alignment:
Q  446 ggctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgtt 528  Q
    |||||||||| | ||| ||||| |||||||||||| ||||||||| | ||| |  ||||||||||| ||||||| ||| ||||    
T  34719886 ggctttcgcaccagtttccgacccaccaaaggtgagcgactaatctgactcgtgcgtagaggcatgcgcactggtcaagcgtt 34719804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 446 - 511
Target Start/End: Complemental strand, 34697445 - 34697380
Alignment:
Q  446 ggctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatg 511  Q
    |||||||||||||||| || || || |||| |||  |||||||||||||||||  |||||||||||    
T  34697445 ggctttcgcatcggtttccaacccatcaaaagtgggcgactaatccggctcatgcgtagaggcatg 34697380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 446 - 511
Target Start/End: Original strand, 35211170 - 35211235
Alignment:
Q  446 ggctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatg 511  Q
    ||||||| || ||||| ||||| ||||||||||| ||||||||| | ||||||  |||||||||||    
T  35211170 ggctttcacaccggtttccgacccaccaaaggtggacgactaattcagctcatgcgtagaggcatg 35211235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 458 - 531
Target Start/End: Original strand, 40288487 - 40288560
Alignment:
Q  458 ggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    |||| ||||| |||||| | ||| ||||||||||||||| | ||||||||||||   ||||||||| |||||||    
T  40288487 ggtttccgacccaccaaggatgagcgactaatccggctcgtgtgtagaggcatgcatactggccaaccgttgtt 40288560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 446 - 531
Target Start/End: Complemental strand, 44969774 - 44969689
Alignment:
Q  446 ggctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    ||||||| || ||||| ||||  |||||| | || ||||||||||||||||||  |||| ||||||  |||||||||| |||||||    
T  44969774 ggctttcacaccggtttccgatccaccaatgatggacgactaatccggctcatgcgtaggggcatgcacactggccaagcgttgtt 44969689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 470 - 531
Target Start/End: Complemental strand, 48761262 - 48761201
Alignment:
Q  470 accaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    |||||||||| ||||||||||| |||| |  |||||||||||| ||||| |||| |||||||    
T  48761262 accaaaggtggacgactaatccagctcgtgcgtagaggcatgtccactgaccaaacgttgtt 48761201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 479 - 531
Target Start/End: Original strand, 47312930 - 47312982
Alignment:
Q  479 gaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    |||||||||||| |||||||  ||||||||||  ||||||||||| |||||||    
T  47312930 gaacgactaatctggctcatgcgtagaggcatacgcactggccaaacgttgtt 47312982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 447 - 519
Target Start/End: Original strand, 50503360 - 50503432
Alignment:
Q  447 gctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactgg 519  Q
    ||||||||||||||| ||||| |||||  ||||  |||| |||||||||| |  ||||||||||| |||||||    
T  50503360 gctttcgcatcggtttccgacccaccattggtgggcgacaaatccggctcgtgcgtagaggcatgcgcactgg 50503432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 94; Significance: 1e-45; HSPs: 51)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 19 - 140
Target Start/End: Original strand, 4416248 - 4416369
Alignment:
Q  19 catcacgtaatggtttgttttggttgtttgtatgattctaaatttgtagagtagctcttttggcacaccttgtgctagaagagttgcttttggtgattaa 118  Q
    ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |    
T  4416248 catcacgtaatggtttgttttggttgtttgtatgactctaagtttgtagagtagctcttttgacacaccttgtgctagaagagttgcttttggtgattta 4416347  T
Q  119 tttaatttcatttttgattgtt 140  Q
    | ||||| ||||||| ||||||    
T  4416348 tataattccattttttattgtt 4416369  T

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Target: chr5; HSP #2
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 446 - 531
Target Start/End: Original strand, 5731917 - 5732002
Alignment:
Q  446 ggctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    |||||||||| ||||| ||||| ||| |||||||||||||||||| |||||||| ||||||||||| ||||||||||| |||||||    
T  5731917 ggctttcgcaccggtttccgacccactaaaggtgaacgactaatctggctcatacgtagaggcatgcgcactggccaagcgttgtt 5732002  T

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Target: chr5; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 15 - 140
Target Start/End: Original strand, 34874983 - 34875107
Alignment:
Q  15 tggacatcacgtaatggtttgttttggttgtttgtatgattctaaatttgtagagtagctcttttggcacaccttgtgctagaagagttgcttttggtga 114  Q
    |||||||| |||||| ||||  |||| |||||||||||| |||   ||||||||||||||||||||||||||||||||||| |  || |||||||||||     
T  34874983 tggacatcgcgtaatagttt--tttgtttgtttgtatgactctgtgtttgtagagtagctcttttggcacaccttgtgctacagaagctgcttttggtgg 34875080  T
Q  115 ttaat-ttaatttcatttttgattgtt 140  Q
    ||||| | |||| ||||||||||||||    
T  34875081 ttaatataaattccatttttgattgtt 34875107  T

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Target: chr5; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 446 - 531
Target Start/End: Complemental strand, 9805114 - 9805029
Alignment:
Q  446 ggctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    |||||||||| | ||| ||||| ||||||||||| ||||||||||||||||||  ||||||||||| ||||||||||| |||||||    
T  9805114 ggctttcgcacctgtttccgacccaccaaaggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgtt 9805029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 446 - 531
Target Start/End: Complemental strand, 42086437 - 42086352
Alignment:
Q  446 ggctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    |||||||||| ||||| ||||| ||||||||||| ||||||||||||||||||  ||||||||||| ||||||| ||| |||||||    
T  42086437 ggctttcgcaccggtttccgacccaccaaaggtggacgactaatccggctcatgcgtagaggcatgcgcactggtcaagcgttgtt 42086352  T

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Target: chr5; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 74 - 140
Target Start/End: Complemental strand, 27895442 - 27895376
Alignment:
Q  74 tcttttggcacaccttgtgctagaagagttgcttttggtgattaatttaatttcatttttgattgtt 140  Q
    |||||||||||||||||||| | ||||||||||||||||| ||||| ||||| ||||||||||||||    
T  27895442 tcttttggcacaccttgtgccaaaagagttgcttttggtggttaatataattccatttttgattgtt 27895376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 44 - 140
Target Start/End: Complemental strand, 6048804 - 6048707
Alignment:
Q  44 gtttgtatgattctaaatttgtagagtagctcttttggcacaccttgtgctagaagagttgcttttggtgattaattta-atttcatttttgattgtt 140  Q
    |||||||||| |||   |||||||||||| |||||||||||||||| ||||||| ||||||||||||||| ||||| || ||| ||||||| ||||||    
T  6048804 gtttgtatgactctgtgtttgtagagtagttcttttggcacaccttatgctagaggagttgcttttggtggttaatatatattccattttttattgtt 6048707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 446 - 523
Target Start/End: Original strand, 39099776 - 39099853
Alignment:
Q  446 ggctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaa 523  Q
    |||||| ||| ||||| ||||| |||||||||||  |||||||||||||||||  |||||||||||||||||||||||    
T  39099776 ggcttttgcaccggtttccgacccaccaaaggtgggcgactaatccggctcatgcgtagaggcatgtgcactggccaa 39099853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 447 - 523
Target Start/End: Complemental strand, 8513628 - 8513552
Alignment:
Q  447 gctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaa 523  Q
    ||||||||| ||||| ||||| ||||||||||| |||||||||| ||||| |  |||||||||||||||||||||||    
T  8513628 gctttcgcaccggtttccgacccaccaaaggtggacgactaatctggctcgtgcgtagaggcatgtgcactggccaa 8513552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 447 - 531
Target Start/End: Complemental strand, 40117524 - 40117440
Alignment:
Q  447 gctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    ||||||||| |||||  |||  |||||||||||||||| |||||||||||||  ||||||||||| ||||||||||| |||||||    
T  40117524 gctttcgcaccggttttcgatccaccaaaggtgaacgattaatccggctcatgcgtagaggcatgcgcactggccaagcgttgtt 40117440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 26 - 140
Target Start/End: Complemental strand, 4922819 - 4922705
Alignment:
Q  26 taatggtttgttttggttgtttgtatgattctaaatttgtagagtagctcttttggcacaccttgtgctagaagagttgcttttggtgattaattta-at 124  Q
    ||||||||||| |||||||||||| ||| |||   |||||| ||||  |||||| ||||||||| ||||||| ||||||||||||||| ||||| || ||    
T  4922819 taatggtttgtattggttgtttgtttgactctgtttttgtaaagtaattcttttagcacaccttatgctagaggagttgcttttggtg-ttaatatatat 4922721  T
Q  125 ttcatttttgattgtt 140  Q
    | ||||||||||||||    
T  4922720 tccatttttgattgtt 4922705  T

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Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 469 - 523
Target Start/End: Original strand, 14974344 - 14974398
Alignment:
Q  469 caccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaa 523  Q
    ||||||||||| ||||||||||||||||||  |||||||||||||||||||||||    
T  14974344 caccaaaggtggacgactaatccggctcatgcgtagaggcatgtgcactggccaa 14974398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 449 - 531
Target Start/End: Original strand, 42291505 - 42291587
Alignment:
Q  449 tttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    ||||||| ||||| ||||  || |||||||| |||||||||||||||| |  ||||||||||||||||||||||| |||||||    
T  42291505 tttcgcaccggtttccgatccatcaaaggtggacgactaatccggctcgtgcgtagaggcatgtgcactggccaagcgttgtt 42291587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 446 - 523
Target Start/End: Complemental strand, 1538541 - 1538464
Alignment:
Q  446 ggctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaa 523  Q
    |||||||||| ||||| ||||| |||||| |||| |||| |||||||||||||  ||||||||||| |||||||||||    
T  1538541 ggctttcgcaccggtttccgacccaccaatggtggacgattaatccggctcatgcgtagaggcatgcgcactggccaa 1538464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 448 - 521
Target Start/End: Complemental strand, 2485304 - 2485231
Alignment:
Q  448 ctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggcc 521  Q
    |||||||||||||| ||||| || ||||||||| ||||||||||| |||||| ||||||||||| |||| ||||    
T  2485304 ctttcgcatcggtttccgacccatcaaaggtgagcgactaatccgactcatacgtagaggcatgcgcacaggcc 2485231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 446 - 523
Target Start/End: Complemental strand, 13664370 - 13664293
Alignment:
Q  446 ggctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaa 523  Q
    |||||||||| ||||| ||||| |||||||||||| ||| ||||| |||||||  ||||||||||| |||||||||||    
T  13664370 ggctttcgcaccggtttccgacacaccaaaggtgatcgattaatctggctcatgcgtagaggcatgcgcactggccaa 13664293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 446 - 523
Target Start/End: Complemental strand, 19572834 - 19572757
Alignment:
Q  446 ggctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaa 523  Q
    ||||||||||  |||| || || |||||| |||||||||||||||||||||||  ||||||||||| |||||||||||    
T  19572834 ggctttcgcactggtttccaacccaccaatggtgaacgactaatccggctcatgcgtagaggcatgcgcactggccaa 19572757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 446 - 511
Target Start/End: Complemental strand, 40773383 - 40773318
Alignment:
Q  446 ggctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatg 511  Q
    |||||||||| ||||| ||||| |||||||| ||||||||||||||| ||| ||||||||||||||    
T  40773383 ggctttcgcaccggtttccgacgcaccaaagatgaacgactaatccgactcgtatgtagaggcatg 40773318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 446 - 531
Target Start/End: Original strand, 41163457 - 41163542
Alignment:
Q  446 ggctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    |||||||||| | ||| ||||| ||| ||||||| ||||||||||| ||||||  |||||| |||||||||||||||| |||||||    
T  41163457 ggctttcgcaccagtttccgacccacaaaaggtggacgactaatccagctcatgcgtagagacatgtgcactggccaaacgttgtt 41163542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 448 - 528
Target Start/End: Original strand, 14588616 - 14588696
Alignment:
Q  448 ctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgtt 528  Q
    |||||||| |||||  || ||||||||||||| ||||||||||||||||||  ||||||||||| ||||||| ||| ||||    
T  14588616 ctttcgcaccggttttcggctcaccaaaggtggacgactaatccggctcatgcgtagaggcatgcgcactggtcaagcgtt 14588696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 26 - 140
Target Start/End: Original strand, 20209274 - 20209389
Alignment:
Q  26 taatggtttgttttggttgtttgtat-gattctaaatttgtagagtagctcttttggcacaccttgtgctagaagagttgcttttggtgattaattta-a 123  Q
    ||||||||||| |||||||||||| | || |||   |||||| ||||  |||||| ||||||||||||||||| ||||||||||||||| ||||| || |    
T  20209274 taatggtttgtattggttgtttgttttgactctgtttttgtaaagtaattcttttagcacaccttgtgctagaggagttgcttttggtg-ttaatatata 20209372  T
Q  124 tttcatttttgattgtt 140  Q
    || ||||||||||||||    
T  20209373 ttccatttttgattgtt 20209389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 447 - 519
Target Start/End: Complemental strand, 20255478 - 20255406
Alignment:
Q  447 gctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactgg 519  Q
    ||||||||| | ||| ||||||||||||||||| |||||||||||| |||||  ||||||||||| |||||||    
T  20255478 gctttcgcaccagtttccgactcaccaaaggtggacgactaatccgactcatgcgtagaggcatgcgcactgg 20255406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 447 - 531
Target Start/End: Complemental strand, 23383766 - 23383682
Alignment:
Q  447 gctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    ||||||||| | ||| ||||| ||||||||||| ||||||||||| ||||||  ||||||||| | ||||||||||| |||||||    
T  23383766 gctttcgcaccagtttccgacccaccaaaggtggacgactaatccagctcatgcgtagaggcaagcgcactggccaagcgttgtt 23383682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 472 - 531
Target Start/End: Original strand, 7308387 - 7308446
Alignment:
Q  472 caaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    ||||||||| |||||||||||||||||  |||||||||||||||||| |||| |||||||    
T  7308387 caaaggtgagcgactaatccggctcatgcgtagaggcatgtgcactgcccaagcgttgtt 7308446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 36 - 119
Target Start/End: Complemental strand, 8892071 - 8891988
Alignment:
Q  36 ttttggttgtttgtatgattctaaatttgtagagtagctcttttggcacaccttgtgctagaagagttgcttttggtgattaat 119  Q
    ||||| |||||||||||| | |   |||||||||||||||||||||||| |||||||||| | ||| ||||||||||| |||||    
T  8892071 ttttgtttgtttgtatgactatgtgtttgtagagtagctcttttggcacgccttgtgctataggagctgcttttggtggttaat 8891988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 447 - 530
Target Start/End: Complemental strand, 14728192 - 14728109
Alignment:
Q  447 gctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgt 530  Q
    ||||||||| ||||| ||||| || ||||||||| | |||||||||||||||  ||||||||||| |||||| |||| ||||||    
T  14728192 gctttcgcaccggtttccgacccatcaaaggtgagcaactaatccggctcatgcgtagaggcatgcgcactgaccaagcgttgt 14728109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 448 - 511
Target Start/End: Original strand, 27648424 - 27648487
Alignment:
Q  448 ctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatg 511  Q
    |||||||||||||| ||||  |||||||| || ||||||||||||||||||| |||||||||||    
T  27648424 ctttcgcatcggtttccgatccaccaaagatggacgactaatccggctcatacgtagaggcatg 27648487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 446 - 523
Target Start/End: Original strand, 4016252 - 4016329
Alignment:
Q  446 ggctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaa 523  Q
    ||||||||||  |||| ||||| |||||| ||||| | ||||||||||||| | |||||||||||| |||||||||||    
T  4016252 ggctttcgcactggtttccgacccaccaatggtgagcaactaatccggctcgtgtgtagaggcatgcgcactggccaa 4016329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 447 - 508
Target Start/End: Complemental strand, 28857255 - 28857194
Alignment:
Q  447 gctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggc 508  Q
    ||||||||| ||||| ||||| |||||||||||| |||||||||||||||||  ||||||||    
T  28857255 gctttcgcaccggtttccgacccaccaaaggtgagcgactaatccggctcatgcgtagaggc 28857194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 446 - 523
Target Start/End: Original strand, 42861215 - 42861292
Alignment:
Q  446 ggctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaa 523  Q
    |||||||||| ||||  ||||| |||||| |||| |||| |||||||||||||  ||||||||||| |||||||||||    
T  42861215 ggctttcgcaccggtctccgacccaccaatggtggacgattaatccggctcatgcgtagaggcatgcgcactggccaa 42861292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 463 - 531
Target Start/End: Complemental strand, 12082001 - 12081933
Alignment:
Q  463 ccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    ||||||||||||||||| ||||||||| |||||| |  ||||| ||||| ||||||||||| |||||||    
T  12082001 ccgactcaccaaaggtggacgactaattcggctcgtgcgtagatgcatgcgcactggccaagcgttgtt 12081933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 464 - 531
Target Start/End: Original strand, 9168268 - 9168335
Alignment:
Q  464 cgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    |||| ||| ||||||| ||||||||||||||||||  ||||||| ||| ||||||||||| |||||||    
T  9168268 cgacccactaaaggtggacgactaatccggctcatgcgtagaggtatgcgcactggccaagcgttgtt 9168335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 449 - 520
Target Start/End: Complemental strand, 20525945 - 20525874
Alignment:
Q  449 tttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggc 520  Q
    ||||||| ||||| ||||  |||||| |||| ||||||||||||||||||  ||||||||||| ||||||||    
T  20525945 tttcgcaccggtttccgatccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcactggc 20525874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 448 - 531
Target Start/End: Original strand, 25417182 - 25417265
Alignment:
Q  448 ctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    |||||||| ||||| | ||| |||||| ||| || |||||||||||||| |  ||||||||||| ||||||||||| |||||||    
T  25417182 ctttcgcaccggtttctgacccaccaatggtaaatgactaatccggctcgttcgtagaggcatgcgcactggccaagcgttgtt 25417265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 447 - 498
Target Start/End: Complemental strand, 28857058 - 28857007
Alignment:
Q  447 gctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcat 498  Q
    ||||||||| ||||| ||||| |||||||||||| |||||||||||||||||    
T  28857058 gctttcgcaccggtttccgacccaccaaaggtgagcgactaatccggctcat 28857007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 446 - 531
Target Start/End: Complemental strand, 9812982 - 9812897
Alignment:
Q  446 ggctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    |||||||||| ||||| | ||| |||||||||||  |||||||||||| ||||  ||||| |||||  |||||||||| |||||||    
T  9812982 ggctttcgcaccggtttctgacccaccaaaggtgggcgactaatccggttcatgcgtagaagcatgcacactggccaagcgttgtt 9812897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 446 - 531
Target Start/End: Complemental strand, 30349689 - 30349604
Alignment:
Q  446 ggctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    |||||||||| ||||| ||| | |||| |||||| ||||||||| | ||||||   |||||||||| ||||||||||||| |||||    
T  30349689 ggctttcgcaccggtttccggcccacctaaggtggacgactaattcagctcatgcatagaggcatgcgcactggccaatcattgtt 30349604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 446 - 531
Target Start/End: Original strand, 38897716 - 38897801
Alignment:
Q  446 ggctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    ||||||||||  |||| ||||  |||||||||||  | ||||||||||||| |  ||||||||||| ||||||||||| |||||||    
T  38897716 ggctttcgcactggtttccgatccaccaaaggtgggcaactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgtt 38897801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 447 - 528
Target Start/End: Complemental strand, 43399237 - 43399156
Alignment:
Q  447 gctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgtt 528  Q
    ||||||||| ||||| |||||  |||||| ||| ||||||||||| |||| |  ||||||||||| ||||||||||| ||||    
T  43399237 gctttcgcaccggtttccgaccaaccaaatgtggacgactaatcctgctcgtgcgtagaggcatgcgcactggccaagcgtt 43399156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 447 - 531
Target Start/End: Original strand, 20682615 - 20682699
Alignment:
Q  447 gctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    ||||||||| ||||| || || ||| |||||||  ||| ||||||||||| |  ||||||||||| ||||||||||| |||||||    
T  20682615 gctttcgcaccggtttccaacccactaaaggtggtcgattaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgtt 20682699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 36 - 119
Target Start/End: Original strand, 7001327 - 7001410
Alignment:
Q  36 ttttggttgtttgtatgattctaaatttgtagagtagctcttttggcacaccttgtgctagaagagttgcttttggtgattaat 119  Q
    ||||| |||||||||||| | |   ||||||||||||||||||||| || |||| ||||| | ||| ||||||||||| |||||    
T  7001327 ttttgtttgtttgtatgactttgtgtttgtagagtagctcttttggtacgccttatgctataggagctgcttttggtggttaat 7001410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 472 - 531
Target Start/End: Original strand, 11845824 - 11845883
Alignment:
Q  472 caaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    ||||||||  ||| |||| ||||||||| ||||||||||| ||||||||||| |||||||    
T  11845824 caaaggtgggcgattaattcggctcatacgtagaggcatgcgcactggccaaacgttgtt 11845883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 469 - 531
Target Start/End: Original strand, 3653934 - 3653996
Alignment:
Q  469 caccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    ||||||||||| |||||||||||| ||| |  ||||||||||| ||||||| ||| |||||||    
T  3653934 caccaaaggtggacgactaatccgcctcgtgcgtagaggcatgcgcactggtcaagcgttgtt 3653996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 531
Target Start/End: Complemental strand, 19839434 - 19839352
Alignment:
Q  449 tttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    |||||||||| || ||||||||| ||||||   ||||||||| | ||| |||||||||||||| ||||||  ||| |||||||    
T  19839434 tttcgcatcgatttccgactcactaaaggtaggcgactaatctgactcgtatgtagaggcatgcgcactgatcaagcgttgtt 19839352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 473 - 531
Target Start/End: Original strand, 24463910 - 24463968
Alignment:
Q  473 aaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    |||||||  ||||||||||||||| |   |||||||||| |||||||||||||||||||    
T  24463910 aaaggtgggcgactaatccggctcgtgcatagaggcatgcgcactggccaatcgttgtt 24463968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 448 - 498
Target Start/End: Original strand, 25950593 - 25950643
Alignment:
Q  448 ctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcat 498  Q
    ||||||||||| ||  |||| ||||||||||| ||||||||||||||||||    
T  25950593 ctttcgcatcgattttcgacccaccaaaggtggacgactaatccggctcat 25950643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 473 - 531
Target Start/End: Complemental strand, 37263323 - 37263265
Alignment:
Q  473 aaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    ||||||| |||||||||||||||| |  ||||||||||| ||| ||||||| |||||||    
T  37263323 aaaggtggacgactaatccggctcgtgcgtagaggcatgcgcattggccaagcgttgtt 37263265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 446 - 531
Target Start/End: Complemental strand, 12705124 - 12705039
Alignment:
Q  446 ggctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    |||||||||| ||||| | ||| |||||||||||  |||||||||||| ||||  ||||| |||||  |||||| ||| |||||||    
T  12705124 ggctttcgcaccggtttctgacccaccaaaggtgggcgactaatccggttcatgcgtagaagcatgcacactggtcaagcgttgtt 12705039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 446 - 523
Target Start/End: Complemental strand, 12766241 - 12766164
Alignment:
Q  446 ggctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaa 523  Q
    |||||||||| ||||| | ||| |||||||||||  ||||||||| || ||||  |||||||||||  ||||||||||    
T  12766241 ggctttcgcaccggtttctgacccaccaaaggtgggcgactaatctggttcatgcgtagaggcatgcacactggccaa 12766164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 470 - 519
Target Start/End: Original strand, 35561839 - 35561888
Alignment:
Q  470 accaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactgg 519  Q
    ||||| ||||| ||||||||| ||||||| |||||||||||| |||||||    
T  35561839 accaacggtgagcgactaatctggctcatgtgtagaggcatgcgcactgg 35561888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 140
Target Start/End: Complemental strand, 40089872 - 40089807
Alignment:
Q  77 tttggcacaccttgtgctagaagagtt-gcttttggtgattaattta-atttcatttttgattgtt 140  Q
    ||||||||||||||||||||| | ||| |||||||||| ||||| || ||| ||||||||||||||    
T  40089872 tttggcacaccttgtgctagaggggttcgcttttggtggttaatatatattacatttttgattgtt 40089807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 82; Significance: 2e-38; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 19 - 140
Target Start/End: Original strand, 17079739 - 17079860
Alignment:
Q  19 catcacgtaatggtttgttttggttgtttgtatgattctaaatttgtagagtagctcttttggcacaccttgtgctagaagagttgcttttggtgattaa 118  Q
    |||| |||||||||||||||||||||||||||||| |||  ||||||| ||||| |||||||||||||||||||||||||||||| ||||||||| ||||    
T  17079739 catcgcgtaatggtttgttttggttgtttgtatgactctgtatttgtaaagtagttcttttggcacaccttgtgctagaagagtttcttttggtggttaa 17079838  T
Q  119 tttaatttcatttttgattgtt 140  Q
    | ||||| ||||||||||||||    
T  17079839 tataattccatttttgattgtt 17079860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 25 - 140
Target Start/End: Original strand, 6831485 - 6831600
Alignment:
Q  25 gtaatggtttgttttggttgtttgtatgattctaaatttgtagagtagctcttttggcacaccttgtgctagaagagttgcttttggtgattaatttaat 124  Q
    ||||||||||| ||||||||||||||||| ||||   ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  6831485 gtaatggtttgctttggttgtttgtatgactctatggttgtaaagtagttcttttggcacaccttgtgctagaagagttgcttttggtgattaatataat 6831584  T
Q  125 ttcatttttgattgtt 140  Q
    | ||||||||||||||    
T  6831585 tccatttttgattgtt 6831600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 9199800 - 9199898
Alignment:
Q  19 catcacgtaatggtttgttttggttgtttgtatgattctaaatttgtagagtagctcttttggcacaccttgtgctagaagagttgcttttggtgattaa 118  Q
    ||||||||||| |||||||| ||||||||||| ||||||  ||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||    
T  9199800 catcacgtaattgtttgttt-ggttgtttgtacgattctttatttgtagagtagttcttttgacacaccttgtgctagaagagttgcttttggtgattaa 9199898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 446 - 531
Target Start/End: Complemental strand, 21898761 - 21898676
Alignment:
Q  446 ggctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    |||||||||| ||||| ||||| ||| ||||||||||||||||||||||||||  ||||||||||| ||||||||||| |||||||    
T  21898761 ggctttcgcaccggtttccgacccactaaaggtgaacgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgtt 21898676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 447 - 531
Target Start/End: Complemental strand, 3601196 - 3601112
Alignment:
Q  447 gctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    ||||||||| ||||| ||||| ||||||||||| |||||||||||||||| | |||| ||||||| ||||||||||| |||||||    
T  3601196 gctttcgcaccggtttccgacccaccaaaggtggacgactaatccggctcgtgtgtataggcatgcgcactggccaagcgttgtt 3601112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 446 - 523
Target Start/End: Original strand, 6606094 - 6606171
Alignment:
Q  446 ggctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaa 523  Q
    |||||||||| ||||| ||||| |||||| |||| ||||||||||||||||||  |||||||||||| ||||||||||    
T  6606094 ggctttcgcaccggtttccgacccaccaatggtggacgactaatccggctcatgcgtagaggcatgtacactggccaa 6606171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 446 - 531
Target Start/End: Original strand, 9633622 - 9633707
Alignment:
Q  446 ggctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    |||||||||| ||||| ||||| |||||||||||  ||||||||||||||| |  ||||||||||| ||||||||||| |||||||    
T  9633622 ggctttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgtt 9633707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 447 - 531
Target Start/End: Original strand, 34954617 - 34954701
Alignment:
Q  447 gctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    |||||||||| |||| ||||| || |||||||| |||||||||| |||||||  ||||||| ||||||||||||||| |||||||    
T  34954617 gctttcgcattggtttccgacccatcaaaggtggacgactaatctggctcatgcgtagaggtatgtgcactggccaaacgttgtt 34954701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 447 - 529
Target Start/End: Complemental strand, 31129289 - 31129207
Alignment:
Q  447 gctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttg 529  Q
    ||||||||| ||||| ||||||||||||||||| || ||||||| |||||||  ||||||||||| ||||| ||||| |||||    
T  31129289 gctttcgcaccggtttccgactcaccaaaggtgcacaactaatctggctcatgcgtagaggcatgcgcactagccaagcgttg 31129207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 446 - 531
Target Start/End: Complemental strand, 12606543 - 12606458
Alignment:
Q  446 ggctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    |||||||||| ||||| ||  |||||||||||||  ||||||||||||||| |  ||||||||||| ||||||||||| |||||||    
T  12606543 ggctttcgcaccggtttccagctcaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactggccaaacgttgtt 12606458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 446 - 531
Target Start/End: Original strand, 30788850 - 30788935
Alignment:
Q  446 ggctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    |||||||||| ||||| ||||| |||||||||||  ||||||||||||||| |   |||||||||| ||||||||||| |||||||    
T  30788850 ggctttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcgtgcctagaggcatgcgcactggccaaacgttgtt 30788935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 447 - 523
Target Start/End: Original strand, 5253221 - 5253297
Alignment:
Q  447 gctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaa 523  Q
    ||||||||| ||||| ||||| |||||||||||  ||| |||||||||||||  ||||||||||| |||||||||||    
T  5253221 gctttcgcaccggtttccgacccaccaaaggtgggcgattaatccggctcatgcgtagaggcatgcgcactggccaa 5253297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 448 - 531
Target Start/End: Original strand, 29333138 - 29333221
Alignment:
Q  448 ctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    |||||||| ||||| |||||  |||||||||| |||||| || ||||||||  ||||||||||| ||||||||||| |||||||    
T  29333138 ctttcgcaccggttaccgacctaccaaaggtggacgactgattcggctcatgcgtagaggcatgcgcactggccaaacgttgtt 29333221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 446 - 524
Target Start/End: Original strand, 14783417 - 14783495
Alignment:
Q  446 ggctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaat 524  Q
    |||||||||| ||||| ||||| |||||| |||| ||||||||||||||||||  |||||||||||  |||| ||||||    
T  14783417 ggctttcgcaccggtttccgacccaccaatggtggacgactaatccggctcatgcgtagaggcatgcacactagccaat 14783495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 446 - 531
Target Start/End: Original strand, 3587942 - 3588027
Alignment:
Q  446 ggctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    |||||||||||| ||| ||||  || |||||||  ||||||||||||| ||||  ||||||| ||||||||||||||| |||||||    
T  3587942 ggctttcgcatcagtttccgatccatcaaaggttgacgactaatccggttcatgcgtagaggtatgtgcactggccaagcgttgtt 3588027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 446 - 531
Target Start/End: Complemental strand, 13469046 - 13468961
Alignment:
Q  446 ggctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    |||||||||| ||||| || || |||||| ||||  ||||||||| ||||| |  |||||||||||||||||| ||||||||||||    
T  13469046 ggctttcgcaccggtttccaacccaccaatggtgggcgactaatctggctcgtgcgtagaggcatgtgcactgaccaatcgttgtt 13468961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 446 - 523
Target Start/End: Complemental strand, 19089611 - 19089534
Alignment:
Q  446 ggctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaa 523  Q
    |||||||||| ||||| ||||| ||||||||||  |||||||||||||||| |  |||||||||||  ||||||||||    
T  19089611 ggctttcgcaccggtttccgacccaccaaaggtagacgactaatccggctcgtgcgtagaggcatgctcactggccaa 19089534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 446 - 531
Target Start/End: Original strand, 29444762 - 29444847
Alignment:
Q  446 ggctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    ||||||||||   ||| ||||| |||||||| || || |||||||||||||||  ||||||||||| ||||||||||| |||||||    
T  29444762 ggctttcgcactagtttccgacccaccaaagatggacaactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgtt 29444847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 61 - 113
Target Start/End: Original strand, 11061444 - 11061496
Alignment:
Q  61 tttgtagagtagctcttttggcacaccttgtgctagaagagttgcttttggtg 113  Q
    |||||||||||||||||||||||||||||||||||   ||| |||||||||||    
T  11061444 tttgtagagtagctcttttggcacaccttgtgctacttgagctgcttttggtg 11061496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 447 - 523
Target Start/End: Original strand, 13036002 - 13036078
Alignment:
Q  447 gctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaa 523  Q
    ||||||||| ||||| ||||| ||||||  ||| |||||||||| |||||||  ||||||||||| |||||||||||    
T  13036002 gctttcgcaccggtttccgacccaccaatagtggacgactaatctggctcatgcgtagaggcatgcgcactggccaa 13036078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 447 - 519
Target Start/End: Complemental strand, 30410557 - 30410485
Alignment:
Q  447 gctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactgg 519  Q
    ||||||||||||||| ||||| |||||||| ||| ||| |||||| ||||||  ||||||||||| |||||||    
T  30410557 gctttcgcatcggtttccgacccaccaaagatgagcgattaatccagctcatgcgtagaggcatgcgcactgg 30410485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 446 - 531
Target Start/End: Original strand, 13584443 - 13584532
Alignment:
Q  446 ggctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcat--atg--tagaggcatgtgcactggccaatcgttgtt 531  Q
    |||||||||  ||||| ||||| ||||||||||| |||| |||||||||||||  |||  |||||||||| ||||||||||| |||||||    
T  13584443 ggctttcgcgccggtttccgacccaccaaaggtggacgattaatccggctcatgcatgcatagaggcatgcgcactggccaaacgttgtt 13584532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 15 - 113
Target Start/End: Complemental strand, 26526127 - 26526028
Alignment:
Q  15 tggacatcacgtaatggtttgttttggttgtttgtat-gattctaaatttgtagagtagctcttttggcacaccttgtgctagaagagttgcttttggtg 113  Q
    |||||||| | ||||||||||| |||||||||| | | || ||||  |||||| ||||  |||||| |||||||||||||||||  ||||||||||||||    
T  26526127 tggacatcgcttaatggtttgtattggttgtttattttgactctatttttgtacagtaattcttttagcacaccttgtgctagagaagttgcttttggtg 26526028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 31 - 140
Target Start/End: Original strand, 17874361 - 17874471
Alignment:
Q  31 gtttgttttggttgtttgtatgattctaaatttgtagagtagctcttttggcacaccttgtgctagaagagttgcttttggtgattaattta-atttcat 129  Q
    ||||||||||||||||||||||| |||    ||||| ||||  |||| ||||||| |||||| |||  ||||||||||||||| ||||| || ||| |||    
T  17874361 gtttgttttggttgtttgtatgactctgttcttgtaaagtaattcttctggcacaacttgtgttaggggagttgcttttggtgtttaatatatattccat 17874460  T
Q  130 ttttgattgtt 140  Q
    |||| ||||||    
T  17874461 tttttattgtt 17874471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 482 - 531
Target Start/End: Original strand, 14107391 - 14107440
Alignment:
Q  482 cgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    |||||||||||||||||  ||||||||||||||||||| ||| |||||||    
T  14107391 cgactaatccggctcatgcgtagaggcatgtgcactggtcaagcgttgtt 14107440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 472 - 531
Target Start/End: Complemental strand, 8888969 - 8888910
Alignment:
Q  472 caaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    |||||||| |||||||||||| |||||  ||||||| ||| ||||||||||| |||||||    
T  8888969 caaaggtggacgactaatccgactcatgcgtagaggtatgcgcactggccaaacgttgtt 8888910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 472 - 531
Target Start/End: Original strand, 17114920 - 17114979
Alignment:
Q  472 caaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    ||||||||  |||||||||||||||||  |||||||||||| || ||||||| |||||||    
T  17114920 caaaggtgggcgactaatccggctcatgcgtagaggcatgtccattggccaagcgttgtt 17114979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 515
Target Start/End: Original strand, 8149797 - 8149863
Alignment:
Q  449 tttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgca 515  Q
    ||||||| ||||| || || ||||||||||| ||||||||| ||||| ||  |||||||||||||||    
T  8149797 tttcgcaccggtttccaacccaccaaaggtggacgactaattcggctaatgcgtagaggcatgtgca 8149863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 446 - 512
Target Start/End: Complemental strand, 14326110 - 14326044
Alignment:
Q  446 ggctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgt 512  Q
    |||||| ||| || || ||||| |||||||| ||| |||||||||||||||||  ||||||||||||    
T  14326110 ggcttttgcaccgttttccgacccaccaaagatgagcgactaatccggctcatgcgtagaggcatgt 14326044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 446 - 512
Target Start/End: Complemental strand, 14419120 - 14419054
Alignment:
Q  446 ggctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgt 512  Q
    |||||| ||| || || ||||| |||||||| ||| |||||||||||||||||  ||||||||||||    
T  14419120 ggcttttgcaccgttttccgacccaccaaagatgagcgactaatccggctcatgcgtagaggcatgt 14419054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 446 - 531
Target Start/End: Original strand, 8611971 - 8612056
Alignment:
Q  446 ggctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    |||||||||| ||||| | ||| |||||||||||  |||||||||||| ||||  ||||| |||||  |||||| ||| |||||||    
T  8611971 ggctttcgcaccggtttctgacccaccaaaggtgggcgactaatccggttcatgcgtagaagcatgcacactggtcaagcgttgtt 8612056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 446 - 523
Target Start/End: Complemental strand, 8932774 - 8932697
Alignment:
Q  446 ggctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaa 523  Q
    |||||||||| ||||| ||||| || ||||||||   || |||||||||||||  ||||||||||| ||||| |||||    
T  8932774 ggctttcgcaccggtttccgacccatcaaaggtgggtgattaatccggctcatgcgtagaggcatgcgcactagccaa 8932697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 446 - 523
Target Start/End: Complemental strand, 8944240 - 8944163
Alignment:
Q  446 ggctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaa 523  Q
    |||||||||| ||||| ||||| || ||||||||   || |||||||||||||  ||||||||||| ||||| |||||    
T  8944240 ggctttcgcaccggtttccgacccatcaaaggtgggtgattaatccggctcatgcgtagaggcatgcgcactagccaa 8944163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 446 - 531
Target Start/End: Complemental strand, 12635927 - 12635842
Alignment:
Q  446 ggctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    |||||||||| ||||| ||||| ||||||  |||  ||||||||||||||  |  ||||||||||| ||||| ||||| |||||||    
T  12635927 ggctttcgcaccggtttccgacccaccaatagtgggcgactaatccggcttgtgcgtagaggcatgcgcactagccaagcgttgtt 12635842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0481 (Bit Score: 70; Significance: 3e-31; HSPs: 1)
Name: scaffold0481
Description:

Target: scaffold0481; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 15 - 140
Target Start/End: Complemental strand, 1469 - 1344
Alignment:
Q  15 tggacatcacgtaatggtttgttttggttgtttgtatgattctaaatttgtagagtagctcttttggcacaccttgtgctagaagagttgcttttggtga 114  Q
    ||||||||| |||||||||| |||||||||||||||||| ||||  ||| |||||||| ||||| |||||||||||||||| |||||||| |||| ||||    
T  1469 tggacatcatgtaatggtttattttggttgtttgtatgactctatgtttatagagtagttctttcggcacaccttgtgctaaaagagttgtttttagtga 1370  T
Q  115 ttaatttaatttcatttttgattgtt 140  Q
    ||||| ||||| ||||||| ||||||    
T  1369 ttaatataattccattttttattgtt 1344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 66; Significance: 6e-29; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 19 - 140
Target Start/End: Complemental strand, 181721 - 181600
Alignment:
Q  19 catcacgtaatggtttgttttggttgtttgtatgattctaaatttgtagagtagctcttttggcacaccttgtgctagaagagttgcttttggtgattaa 118  Q
    |||| ||||||||||||||||||||| |||||| | | |  ||||||| ||||| |||| ||||||||||||||||||||||||||||||||||| ||||    
T  181721 catcgcgtaatggtttgttttggttggttgtataactttgtatttgtaaagtagttcttgtggcacaccttgtgctagaagagttgcttttggtggttaa 181622  T
Q  119 tttaatttcatttttgattgtt 140  Q
    | ||||| |||||||| |||||    
T  181621 tataattccatttttgtttgtt 181600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 49; Significance: 9e-19; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 447 - 523
Target Start/End: Complemental strand, 6966 - 6890
Alignment:
Q  447 gctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaa 523  Q
    ||||||||| ||||| ||||| |||||||||||| |||||||||||||||||  ||||||||||| |||||||||||    
T  6966 gctttcgcaccggtttccgacccaccaaaggtgagcgactaatccggctcatgcgtagaggcatgcgcactggccaa 6890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 44; Significance: 9e-16; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 448 - 523
Target Start/End: Original strand, 42831 - 42906
Alignment:
Q  448 ctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaa 523  Q
    |||||||| ||||| ||||| |||||||||||  ||||||||||||||||| |||||||||||| |||||| ||||    
T  42831 ctttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcatgtgtagaggcatgcgcactgaccaa 42906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0384 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 453 - 530
Target Start/End: Complemental strand, 6077 - 6000
Alignment:
Q  453 gcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgt 530  Q
    ||||||||| ||||| |||||| |||| ||||||||| || |||||  ||||||||||||||||||||||| ||||||    
T  6077 gcatcggtttccgacccaccaatggtggacgactaattcgtctcatgcgtagaggcatgtgcactggccaagcgttgt 6000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0308 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0308
Description:

Target: scaffold0308; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 36 - 140
Target Start/End: Complemental strand, 11655 - 11550
Alignment:
Q  36 ttttggttgtttgtatgattctaaatttgtagagtagctcttttggcacaccttgtgctagaagagttgcttttggtgattaattta-atttcatttttg 134  Q
    ||||| |||||||||||  |||   |||||||||||||||||||||||| |||||||||| | ||| ||||||||||| ||||| || ||  ||||||||    
T  11655 ttttgtttgtttgtatggctctgtgtttgtagagtagctcttttggcacgccttgtgctataggagctgcttttggtggttaatatatatcccatttttg 11556  T
Q  135 attgtt 140  Q
    ||||||    
T  11555 attgtt 11550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 63 - 140
Target Start/End: Original strand, 8380 - 8457
Alignment:
Q  63 tgtagagtagctcttttggcacaccttgtgctagaagagttgcttttggtgattaatttaatttcatttttgattgtt 140  Q
    |||| ||||| |||| ||||||  ||||||||||||||||||||||||||| ||||| ||||| |||||||| |||||    
T  8380 tgtatagtagttcttgtggcacgtcttgtgctagaagagttgcttttggtggttaatataattccatttttgtttgtt 8457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 447 - 531
Target Start/End: Original strand, 8699 - 8783
Alignment:
Q  447 gctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    ||||||||| | ||| ||||| ||||||||||| ||||||||||| ||||||  ||||||||| | ||||||||||| |||||||    
T  8699 gctttcgcaccagtttccgacccaccaaaggtggacgactaatccagctcatgcgtagaggcaagcgcactggccaagcgttgtt 8783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 447 - 511
Target Start/End: Complemental strand, 681 - 617
Alignment:
Q  447 gctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatg 511  Q
    ||||||||| ||||| ||||| |||||||||||| ||||||||| |||||||| |||||||||||    
T  681 gctttcgcaccggtttccgacccaccaaaggtgagcgactaatctggctcatacgtagaggcatg 617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 446 - 531
Target Start/End: Complemental strand, 319534 - 319449
Alignment:
Q  446 ggctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    |||||||||| ||||| ||| | ||||||||||| ||||||||||| ||||||   |||||| ||| ||||||||||| |||||||    
T  319534 ggctttcgcaccggtttccgccccaccaaaggtggacgactaatccagctcatgcatagagggatgcgcactggccaagcgttgtt 319449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 469 - 531
Target Start/End: Complemental strand, 9934 - 9872
Alignment:
Q  469 caccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    ||||||||||| |||||||||||||||| |  ||||||||||| ||||||||||| |||||||    
T  9934 caccaaaggtggacgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgtt 9872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 446 - 531
Target Start/End: Original strand, 155708 - 155793
Alignment:
Q  446 ggctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    |||||||||| ||| | ||||| |||||||||||  ||||||||||||||| |  ||||||||||| ||||| ||||| |||||||    
T  155708 ggctttcgcaccggcttccgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactagccaagcgttgtt 155793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0765 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0765
Description:

Target: scaffold0765; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 32 - 140
Target Start/End: Original strand, 1348 - 1455
Alignment:
Q  32 tttgttttggttgtttgtatgattctaaatttgtagagtagctcttttggcacaccttgtgctagaagagttgcttttggtgattaatttaatttcattt 131  Q
    |||||||||||| ||||||||| |||    ||||| ||||  |||| |||||||||||||||||| |||||||||||||||  ||||| || || |||||    
T  1348 tttgttttggttatttgtatgactctgttcttgta-agtaattcttctggcacaccttgtgctaggagagttgcttttggtatttaatatatttccattt 1446  T
Q  132 ttgattgtt 140  Q
    ||| |||||    
T  1447 ttgtttgtt 1455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 447 - 531
Target Start/End: Original strand, 1612 - 1696
Alignment:
Q  447 gctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    ||||||||| |||||  |||| |||||||||||  ||||||||  |||||||  ||||||||||| |||||||| ||||||||||    
T  1612 gctttcgcaccggttttcgacccaccaaaggtgggcgactaatttggctcatgcgtagaggcatgcgcactggctaatcgttgtt 1696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 448 - 523
Target Start/End: Original strand, 250024 - 250099
Alignment:
Q  448 ctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaa 523  Q
    |||||||| || || ||||| ||||||||| || ||||||||||||||| |  ||||||||||| |||||||||||    
T  250024 ctttcgcaccgatttccgacccaccaaaggcgagcgactaatccggctcgtgcgtagaggcatgcgcactggccaa 250099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 457 - 523
Target Start/End: Complemental strand, 186618 - 186552
Alignment:
Q  457 cggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaa 523  Q
    ||||| ||||| ||| |||| ||||||||||||||||||| |  |||||||||||||||||| ||||    
T  186618 cggtttccgacccactaaagatgaacgactaatccggctcgtgcgtagaggcatgtgcactgaccaa 186552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 448 - 518
Target Start/End: Complemental strand, 224427 - 224357
Alignment:
Q  448 ctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactg 518  Q
    |||||||| ||||| ||||| |||||||| || |||||||||||||||| |  ||||||| ||||||||||    
T  224427 ctttcgcaccggtttccgacccaccaaagatggacgactaatccggctcgtgcgtagaggtatgtgcactg 224357  T

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Target: scaffold0223 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 448 - 531
Target Start/End: Complemental strand, 16989 - 16906
Alignment:
Q  448 ctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    |||||||||||||| || || |||||||||||| ||||||||| ||||| |  |||||| |||  |||||| |||| |||||||    
T  16989 ctttcgcatcggtttccaacccaccaaaggtgagcgactaatctggctcgtgcgtagagacatacgcactgaccaagcgttgtt 16906  T

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Target: scaffold0086 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 448 - 531
Target Start/End: Complemental strand, 26293 - 26210
Alignment:
Q  448 ctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    ||||||||  |||| |||||||| |||  ||| |||||||||||||||| |  |||||||||||  |||||||||| |||||||    
T  26293 ctttcgcactggtttccgactcatcaattgtggacgactaatccggctcgtgcgtagaggcatgcacactggccaagcgttgtt 26210  T

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Target: scaffold0179 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0179
Description:

Target: scaffold0179; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 26 - 113
Target Start/End: Complemental strand, 7113 - 7024
Alignment:
Q  26 taatggtttgttttggttgtttg-tatgattctaaatttgtagagtagctcttttggcacaccttgtgc-tagaagagttgcttttggtg 113  Q
    ||||||||||| ||||||||||| | ||| ||||  |||||||||||  |||||| |||||| |||||| |||| ||||||||| |||||    
T  7113 taatggtttgtattggttgtttgttttgactctatttttgtagagtaattcttttagcacactttgtgcttagaggagttgcttctggtg 7024  T

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Target: scaffold0029 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 446 - 511
Target Start/End: Complemental strand, 41156 - 41091
Alignment:
Q  446 ggctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatg 511  Q
    |||||||| | ||||| |||||||||||||| ||  ||||||||||||||| |  |||||||||||    
T  41156 ggctttcgaaccggtttccgactcaccaaagatgggcgactaatccggctcgtgcgtagaggcatg 41091  T

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Target: scaffold0004 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 446 - 523
Target Start/End: Original strand, 7832 - 7909
Alignment:
Q  446 ggctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaa 523  Q
    |||||||| | ||||| ||||  |||||||||||  |||||||||| ||| ||  ||||||||||| |||||||||||    
T  7832 ggctttcgtaccggtttccgatccaccaaaggtgggcgactaatccagctaatgcgtagaggcatgcgcactggccaa 7909  T

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Target: scaffold0001 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 447 - 531
Target Start/End: Original strand, 65150 - 65234
Alignment:
Q  447 gctttcgcatcggttcccgactcaccaaaggtgaacgactaatccggctcatatgtagaggcatgtgcactggccaatcgttgtt 531  Q
    ||||||||| ||||| ||||   | |||| |||| |||||||||| ||||||  |||||| |||| ||||||||||| |||||||    
T  65150 gctttcgcaccggtttccgatctatcaaaagtgagcgactaatccagctcatgcgtagagacatgcgcactggccaagcgttgtt 65234  T

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