View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8426_high_14 (Length: 241)

Name: NF8426_high_14
Description: NF8426
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8426_high_14
NF8426_high_14
[»] chr3 (6 HSPs)
chr3 (18-214)||(40418267-40418464)
chr3 (28-137)||(36096329-36096437)
chr3 (25-79)||(25224622-25224677)
chr3 (38-137)||(12124910-12125008)
chr3 (39-116)||(42396707-42396784)
chr3 (24-61)||(50240432-50240469)
[»] chr2 (6 HSPs)
chr2 (24-127)||(14909274-14909376)
chr2 (29-137)||(36720290-36720397)
chr2 (28-98)||(17680705-17680776)
chr2 (24-79)||(27879283-27879338)
chr2 (39-116)||(19044911-19044988)
chr2 (39-116)||(39835411-39835488)
[»] scaffold0114 (1 HSPs)
scaffold0114 (24-137)||(801-913)
[»] chr4 (5 HSPs)
chr4 (28-137)||(39975063-39975171)
chr4 (24-124)||(14266079-14266179)
chr4 (24-61)||(313277-313314)
chr4 (24-61)||(6553494-6553531)
chr4 (24-61)||(35695267-35695304)
[»] chr8 (6 HSPs)
chr8 (27-79)||(32917116-32917168)
chr8 (45-137)||(21588594-21588685)
chr8 (29-71)||(15342119-15342161)
chr8 (29-71)||(15431184-15431226)
chr8 (29-71)||(15522488-15522530)
chr8 (24-61)||(14376363-14376400)
[»] chr6 (6 HSPs)
chr6 (33-79)||(3531848-3531894)
chr6 (40-137)||(4790037-4790133)
chr6 (28-137)||(10191338-10191448)
chr6 (39-116)||(16275407-16275484)
chr6 (39-116)||(28319310-28319387)
chr6 (39-79)||(22826584-22826624)
[»] chr5 (2 HSPs)
chr5 (28-137)||(33013662-33013770)
chr5 (24-61)||(9023905-9023942)
[»] chr7 (1 HSPs)
chr7 (39-105)||(5785714-5785780)
[»] scaffold0284 (1 HSPs)
scaffold0284 (24-61)||(1932-1969)
[»] scaffold0211 (1 HSPs)
scaffold0211 (24-61)||(19548-19585)
[»] scaffold0038 (1 HSPs)
scaffold0038 (39-116)||(110416-110493)
[»] chr1 (4 HSPs)
chr1 (39-116)||(29998068-29998145)
chr1 (24-61)||(45919314-45919351)
chr1 (28-93)||(47783369-47783433)
chr1 (24-61)||(49880737-49880774)
[»] scaffold1315 (1 HSPs)
scaffold1315 (28-60)||(734-766)
[»] scaffold1293 (1 HSPs)
scaffold1293 (28-60)||(1305-1337)


Alignment Details
Target: chr3 (Bit Score: 190; Significance: 1e-103; HSPs: 6)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 18 - 214
Target Start/End: Original strand, 40418267 - 40418464
Alignment:
Q  18 aatctcactattttgttagtgtttggatgtcatttgtttaatttcttatcttaatatttagtctttagttgtcattcacttccattctatgtttt-ttat 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  40418267 aatctcactattttgttagtgtttggatgtcatttgtttaatttcttatcttaatatttagtctttagttgtcattcacttccattctatgtttttttat 40418366  T
Q  117 tcaacctctatcattttaaatctctacatatttaatatttggttaaatgtgtcggtggaaaaatgcagacatgttatattgagttgacgaaatacatg 214  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40418367 tcaacctctatcattttaaatctctacatatttaatatttggttaaatgtgtcggtggaaaaatgcagacatgttatattgagttgacgaaatacatg 40418464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 137
Target Start/End: Original strand, 36096329 - 36096437
Alignment:
Q  28 ttttgttagtgtttggatgtcatttgtttaatttcttatcttaatatttagtctttagttgtcattcacttccattctatgttttttattcaacctctat 127  Q
    |||||||||| ||| | |||||||| || |||||  ||||||||  |||||| || || |||||||| ||||||| | || |||||||||||||||||||    
T  36096329 ttttgttagttttttggtgtcatttcttaaattttgtatcttaaattttagttttgagatgtcattcgcttccatgcaat-ttttttattcaacctctat 36096427  T
Q  128 cattttaaat 137  Q
     |||||||||    
T  36096428 tattttaaat 36096437  T

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Target: chr3; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 79
Target Start/End: Complemental strand, 25224677 - 25224622
Alignment:
Q  25 ctattttgttagtgtttggatgtcatttgtttaatttctt-atcttaatatttagt 79  Q
    |||||||||||||||||| ||||||||| |||||||| || ||||||| |||||||    
T  25224677 ctattttgttagtgtttgaatgtcatttatttaattttttaatcttaaaatttagt 25224622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 137
Target Start/End: Complemental strand, 12125008 - 12124910
Alignment:
Q  38 gtttggatgtcatttgtttaatt-tcttatcttaatatttagtctttagttgtcattcacttccattctatgttttttattcaacctctatcattttaaa 136  Q
    ||||||||||||||| ||||||| | |||||  || | ||||| ||||| ||||||| |||| ||| ||||  ||||||| ||||||||||||||| |||    
T  12125008 gtttggatgtcatttatttaattattttatcaaaaaaattagtatttagatgtcatttactttcatgctat--tttttatgcaacctctatcatttcaaa 12124911  T

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Target: chr3; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 39 - 116
Target Start/End: Complemental strand, 42396784 - 42396707
Alignment:
Q  39 tttggatgtcatttgtttaatttcttatcttaatatttagtctttagttgtcattcacttccattctatgttttttat 116  Q
    |||| |||||||||||||||||| ||||||||| |||||||  || | |||||||  ||| |||| ||| ||||||||    
T  42396784 tttgaatgtcatttgtttaattttttatcttaaaatttagttattggatgtcattttctttcattatatattttttat 42396707  T

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Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 61
Target Start/End: Original strand, 50240432 - 50240469
Alignment:
Q  24 actattttgttagtgtttggatgtcatttgtttaattt 61  Q
    |||||||| ||||| |||||||||||||||||||||||    
T  50240432 actatttttttagtttttggatgtcatttgtttaattt 50240469  T

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Target: chr2 (Bit Score: 44; Significance: 4e-16; HSPs: 6)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 24 - 127
Target Start/End: Original strand, 14909274 - 14909376
Alignment:
Q  24 actattttgttagtgtttggatgtcatttgtttaatttcttatcttaatatttagtctttagttgtcattcacttccattctatgttttttattcaacct 123  Q
    |||||||||||||||||| |||||||||| |||||||| ||||||||| ||||||  ||| | |||| ||| |||  || ||| ||||||||||||||||    
T  14909274 actattttgttagtgttttgatgtcatttatttaattttttatcttaaaatttagatttttgatgtccttcgcttttatgcta-gttttttattcaacct 14909372  T
Q  124 ctat 127  Q
    ||||    
T  14909373 ctat 14909376  T

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Target: chr2; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 137
Target Start/End: Original strand, 36720290 - 36720397
Alignment:
Q  29 tttgttagtgtttggatgtcatttgtttaatttcttatcttaatatttagtctttagttgtcattcacttccattctatgttttttattcaacctctatc 128  Q
    ||||||||| |||  |||||||||||||||||| |||||||||  |||| | ||| | |||||||| ||| ||| | || |||||| ||||||||| ||     
T  36720290 tttgttagtttttatatgtcatttgtttaattttttatcttaaattttaatttttggatgtcattcgctttcatac-attttttttcttcaacctcaatt 36720388  T
Q  129 attttaaat 137  Q
    |||||||||    
T  36720389 attttaaat 36720397  T

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Target: chr2; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 98
Target Start/End: Complemental strand, 17680776 - 17680705
Alignment:
Q  28 ttttgttagtgtttggatgtcatttgtttaa-tttcttatcttaatatttagtctttagttgtcattcactt 98  Q
    |||||||||| |||||||||||||||||||| ||| |||||||||  ||||||  || | ||||||||||||    
T  17680776 ttttgttagtttttggatgtcatttgtttaatttttttatcttaaattttagtaattggatgtcattcactt 17680705  T

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Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 27879283 - 27879338
Alignment:
Q  24 actattttgttagtgtttggatgtcatttgtttaatttcttatcttaatatttagt 79  Q
    |||||||||||  |||||||||||||||||||| |||| |||||| || |||||||    
T  27879283 actattttgttcatgtttggatgtcatttgtttcattttttatctaaaaatttagt 27879338  T

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Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 39 - 116
Target Start/End: Original strand, 19044911 - 19044988
Alignment:
Q  39 tttggatgtcatttgtttaatttcttatcttaatatttagtctttagttgtcattcacttccattctatgttttttat 116  Q
    |||| |||||||||||||||||| ||||||||| |||||||  || | |||||||  ||| |||| ||| ||||||||    
T  19044911 tttgaatgtcatttgtttaattttttatcttaaaatttagttattggatgtcattttctttcattatatattttttat 19044988  T

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Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 39 - 116
Target Start/End: Complemental strand, 39835488 - 39835411
Alignment:
Q  39 tttggatgtcatttgtttaatttcttatcttaatatttagtctttagttgtcattcacttccattctatgttttttat 116  Q
    |||| |||||||||||||||||| ||||||||| |||||||  || | |||||||  ||| |||| ||| ||||||||    
T  39835488 tttgaatgtcatttgtttaattttttatcttaaaatttagttattggatgtcattttctttcattatatattttttat 39835411  T

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Target: scaffold0114 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 24 - 137
Target Start/End: Original strand, 801 - 913
Alignment:
Q  24 actattttgttagtgtttggatgtcatttgtttaatttcttatcttaatatttagtctttagttgtcattcacttccattctatgttttttattcaacct 123  Q
    |||||||| ||||||||||||||||||||||||||||| || |||||| ||||||  |||   |||||||  ||| ||| |||| |||| ||||||| ||    
T  801 actattttcttagtgtttggatgtcatttgtttaatttgttttcttaacatttagattttgtatgtcattatctttcatgctat-ttttctattcaagct 899  T
Q  124 ctatcattttaaat 137  Q
    |||| |||||||||    
T  900 ctattattttaaat 913  T

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Target: chr4 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 5)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 28 - 137
Target Start/End: Original strand, 39975063 - 39975171
Alignment:
Q  28 ttttgttagtgtttggatgtcatttgtttaatttcttatcttaatatttagtctttagttgtcattcacttccattctatgttttttattcaacctctat 127  Q
    |||||||||||||  | ||||||||||| |||||  ||||||||  |||||| || || |||||||| ||||||| | || |||||||||||||||||||    
T  39975063 ttttgttagtgttgtggtgtcatttgttaaattttgtatcttaaattttagttttgagatgtcattcgcttccatgcaat-ttttttattcaacctctat 39975161  T
Q  128 cattttaaat 137  Q
     |||||||||    
T  39975162 tattttaaat 39975171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 124
Target Start/End: Complemental strand, 14266179 - 14266079
Alignment:
Q  24 actattttgttagtgtttggatgtcatttgtttaatttcttatcttaatatttagtctttagttgtcattcacttccattctatgttttttattcaacct 123  Q
    |||||||||||||| ||| ||| |||||| |||||||| | |||||||  ||| ||  || | |||||||||||| ||| |||| ||||||| |||||||    
T  14266179 actattttgttagtttttagatatcatttttttaatttttcatcttaaatttttgttattggatgtcattcactttcatgctattttttttactcaacct 14266080  T
Q  124 c 124  Q
    |    
T  14266079 c 14266079  T

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Target: chr4; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 61
Target Start/End: Original strand, 313277 - 313314
Alignment:
Q  24 actattttgttagtgtttggatgtcatttgtttaattt 61  Q
    |||||||| ||||| |||||||||||||||||||||||    
T  313277 actatttttttagtttttggatgtcatttgtttaattt 313314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 61
Target Start/End: Original strand, 6553494 - 6553531
Alignment:
Q  24 actattttgttagtgtttggatgtcatttgtttaattt 61  Q
    |||||||| ||||| |||||||||||||||||||||||    
T  6553494 actatttttttagtttttggatgtcatttgtttaattt 6553531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 61
Target Start/End: Original strand, 35695267 - 35695304
Alignment:
Q  24 actattttgttagtgtttggatgtcatttgtttaattt 61  Q
    |||||||| ||||| |||||||||||||||||||||||    
T  35695267 actatttttttagtttttggatgtcatttgtttaattt 35695304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 6)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 27 - 79
Target Start/End: Original strand, 32917116 - 32917168
Alignment:
Q  27 attttgttagtgtttggatgtcatttgtttaatttcttatcttaatatttagt 79  Q
    ||||||||||||||| |||||||||| |||||||||||||||||| |||||||    
T  32917116 attttgttagtgttttgatgtcatttttttaatttcttatcttaaaatttagt 32917168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 45 - 137
Target Start/End: Complemental strand, 21588685 - 21588594
Alignment:
Q  45 tgtcatttgtttaatttcttatcttaatatttagtctttagttgtcattcacttccattctatgttttttattcaacctctatcattttaaat 137  Q
    ||||||||||| |||||  ||||||||  |||||| || || |||||||| ||||||| | || ||||||||||||||||||| |||||||||    
T  21588685 tgtcatttgttaaattttgtatcttaaattttagttttgagatgtcattcgcttccatgcaat-ttttttattcaacctctattattttaaat 21588594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 71
Target Start/End: Complemental strand, 15342161 - 15342119
Alignment:
Q  29 tttgttagtgtttggatgtcatttgtttaatttcttatcttaa 71  Q
    ||||||||| |||| |||||||||||||||||| |||||||||    
T  15342161 tttgttagtttttgaatgtcatttgtttaattttttatcttaa 15342119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 71
Target Start/End: Complemental strand, 15431226 - 15431184
Alignment:
Q  29 tttgttagtgtttggatgtcatttgtttaatttcttatcttaa 71  Q
    ||||||||| |||| |||||||||||||||||| |||||||||    
T  15431226 tttgttagtttttgaatgtcatttgtttaattttttatcttaa 15431184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 71
Target Start/End: Complemental strand, 15522530 - 15522488
Alignment:
Q  29 tttgttagtgtttggatgtcatttgtttaatttcttatcttaa 71  Q
    ||||||||| |||| |||||||||||||||||| |||||||||    
T  15522530 tttgttagtttttgaatgtcatttgtttaattttttatcttaa 15522488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 61
Target Start/End: Original strand, 14376363 - 14376400
Alignment:
Q  24 actattttgttagtgtttggatgtcatttgtttaattt 61  Q
    |||||||||||||| |||||||||||||| ||||||||    
T  14376363 actattttgttagtttttggatgtcatttatttaattt 14376400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 35; Significance: 0.00000000008; HSPs: 6)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 33 - 79
Target Start/End: Complemental strand, 3531894 - 3531848
Alignment:
Q  33 ttagtgtttggatgtcatttgtttaatttcttatcttaatatttagt 79  Q
    ||||| ||||||||||||||||||||||| ||||||||| |||||||    
T  3531894 ttagtttttggatgtcatttgtttaattttttatcttaaaatttagt 3531848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 40 - 137
Target Start/End: Complemental strand, 4790133 - 4790037
Alignment:
Q  40 ttggatgtcatttgtttaatttcttatcttaatatttagtctttagttgtcattcacttccattctatgttttttattcaacctctatcattttaaat 137  Q
    ||||||| |||||||| ||||| |||||||||  ||||||  || ||||| |||||||| ||| |||| | ||||||||||| |||||||||| ||||    
T  4790133 ttggatggcatttgtt-aattttttatcttaaattttagttattggttgttattcactttcatgctatatcttttattcaacatctatcatttcaaat 4790037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 137
Target Start/End: Original strand, 10191338 - 10191448
Alignment:
Q  28 ttttgttagtgtttggatgtcatttgttt-aatttcttatcttaatatttagtctttagttgtcattcacttccattctatgttttttattcaacctcta 126  Q
    |||||||||| |||||||||||||||||| | ||| |||||||||  ||||||  || | |||||||||||| ||| |  | |||||||||||| || ||    
T  10191338 ttttgttagtttttggatgtcatttgtttgatttttttatcttaaattttagtaattggatgtcattcactttcatgcattattttttattcaatctata 10191437  T
Q  127 tcattttaaat 137  Q
    | |||| ||||    
T  10191438 ttatttcaaat 10191448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 39 - 116
Target Start/End: Complemental strand, 16275484 - 16275407
Alignment:
Q  39 tttggatgtcatttgtttaatttcttatcttaatatttagtctttagttgtcattcacttccattctatgttttttat 116  Q
    |||| |||||||||||||||||| ||||||||| |||||||  || | |||||||  ||| |||| ||| ||||||||    
T  16275484 tttgaatgtcatttgtttaattttttatcttaaaatttagttattggatgtcattttctttcattatatattttttat 16275407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 39 - 116
Target Start/End: Original strand, 28319310 - 28319387
Alignment:
Q  39 tttggatgtcatttgtttaatttcttatcttaatatttagtctttagttgtcattcacttccattctatgttttttat 116  Q
    |||| |||||||||||||||||| ||||||||| |||||||  || | |||||||  ||| |||| ||| ||||||||    
T  28319310 tttgaatgtcatttgtttaattttttatcttaaaatttagttattggatgtcattttctttcattatatattttttat 28319387  T

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Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 79
Target Start/End: Complemental strand, 22826624 - 22826584
Alignment:
Q  39 tttggatgtcatttgtttaatttcttatcttaatatttagt 79  Q
    |||| |||||||||||||||||| ||||||||| |||||||    
T  22826624 tttgaatgtcatttgtttaattttttatcttaaaatttagt 22826584  T

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Target: chr5 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 137
Target Start/End: Complemental strand, 33013770 - 33013662
Alignment:
Q  28 ttttgttagtgtttggatgtcatttgtttaatttcttatcttaatatttagtctttagttgtcattcacttccattctatgttttttattcaacctctat 127  Q
    |||||||||| ||| | ||||||||||| |||||  ||| ||||  |||||| ||  | |||||||| ||||||| | || |||||||||||||||||||    
T  33013770 ttttgttagttttttggtgtcatttgttaaattttgtattttaaattttagttttgggatgtcattcgcttccatgcaat-ttttttattcaacctctat 33013672  T
Q  128 cattttaaat 137  Q
     |||||||||    
T  33013671 tattttaaat 33013662  T

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Target: chr5; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 61
Target Start/End: Original strand, 9023905 - 9023942
Alignment:
Q  24 actattttgttagtgtttggatgtcatttgtttaattt 61  Q
    |||||||| ||||| |||||||||||||||||||||||    
T  9023905 actatttttttagtttttggatgtcatttgtttaattt 9023942  T

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Target: chr7 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 105
Target Start/End: Complemental strand, 5785780 - 5785714
Alignment:
Q  39 tttggatgtcatttgtttaatttcttatcttaatatttagtctttagttgtcattcacttccattct 105  Q
    ||||||| ||||||||||||||| ||||||||| |||||||  || | |||||||| ||| ||||||    
T  5785780 tttggatatcatttgtttaattttttatcttaaaatttagttattggatgtcattcgctttcattct 5785714  T

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Target: scaffold0284 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0284
Description:

Target: scaffold0284; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 61
Target Start/End: Complemental strand, 1969 - 1932
Alignment:
Q  24 actattttgttagtgtttggatgtcatttgtttaattt 61  Q
    |||||||| ||||| |||||||||||||||||||||||    
T  1969 actatttttttagtttttggatgtcatttgtttaattt 1932  T

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Target: scaffold0211 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 61
Target Start/End: Complemental strand, 19585 - 19548
Alignment:
Q  24 actattttgttagtgtttggatgtcatttgtttaattt 61  Q
    |||||||| ||||| |||||||||||||||||||||||    
T  19585 actatttttttagtttttggatgtcatttgtttaattt 19548  T

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Target: scaffold0038 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 39 - 116
Target Start/End: Original strand, 110416 - 110493
Alignment:
Q  39 tttggatgtcatttgtttaatttcttatcttaatatttagtctttagttgtcattcacttccattctatgttttttat 116  Q
    |||| |||||||||||||||||| ||||||||| |||||||  || | |||||||  ||| |||| ||| ||||||||    
T  110416 tttgaatgtcatttgtttaattttttatcttaaaatttagttattggatgtcattttctttcattatatattttttat 110493  T

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Target: chr1 (Bit Score: 30; Significance: 0.00000008; HSPs: 4)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 39 - 116
Target Start/End: Complemental strand, 29998145 - 29998068
Alignment:
Q  39 tttggatgtcatttgtttaatttcttatcttaatatttagtctttagttgtcattcacttccattctatgttttttat 116  Q
    |||| |||||||||||||||||| ||||||||| |||||||  || | |||||||  ||| |||| ||| ||||||||    
T  29998145 tttgaatgtcatttgtttaattttttatcttaaaatttagttattggatgtcattttctttcattatatattttttat 29998068  T

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Target: chr1; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 61
Target Start/End: Complemental strand, 45919351 - 45919314
Alignment:
Q  24 actattttgttagtgtttggatgtcatttgtttaattt 61  Q
    |||||||| ||||| |||||||||||||||||||||||    
T  45919351 actatttttttagtttttggatgtcatttgtttaattt 45919314  T

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Target: chr1; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 93
Target Start/End: Original strand, 47783369 - 47783433
Alignment:
Q  28 ttttgttagtgtttggatgtcatttgtttaatttcttatcttaatatttagtctttagttgtcatt 93  Q
    |||| ||||| |||||||||||||||||| |||| | ||||||| ||||||||||||  |||||||    
T  47783369 tttttttagtttttggatgtcatttgtttgattt-taatcttaaaatttagtctttaaatgtcatt 47783433  T

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Target: chr1; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 61
Target Start/End: Original strand, 49880737 - 49880774
Alignment:
Q  24 actattttgttagtgtttggatgtcatttgtttaattt 61  Q
    |||||||| ||||| |||||||||||||||||||||||    
T  49880737 actatttttttagtttttggatgtcatttgtttaattt 49880774  T

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Target: scaffold1315 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold1315
Description:

Target: scaffold1315; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 60
Target Start/End: Original strand, 734 - 766
Alignment:
Q  28 ttttgttagtgtttggatgtcatttgtttaatt 60  Q
    |||||||||| ||||||||||||||||||||||    
T  734 ttttgttagtttttggatgtcatttgtttaatt 766  T

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Target: scaffold1293 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold1293
Description:

Target: scaffold1293; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 60
Target Start/End: Complemental strand, 1337 - 1305
Alignment:
Q  28 ttttgttagtgtttggatgtcatttgtttaatt 60  Q
    |||||||||| ||||||||||||||||||||||    
T  1337 ttttgttagtttttggatgtcatttgtttaatt 1305  T

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