View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8426_high_9 (Length: 286)

Name: NF8426_high_9
Description: NF8426
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8426_high_9
NF8426_high_9
[»] chr2 (31 HSPs)
chr2 (17-279)||(16565632-16565897)
chr2 (221-279)||(19566945-19567003)
chr2 (221-279)||(36347665-36347723)
chr2 (221-279)||(2241472-2241530)
chr2 (221-279)||(40022432-40022490)
chr2 (221-279)||(15224818-15224876)
chr2 (232-279)||(29525857-29525904)
chr2 (233-279)||(8426995-8427041)
chr2 (225-279)||(23748161-23748215)
chr2 (221-279)||(36566975-36567033)
chr2 (221-279)||(39732853-39732910)
chr2 (222-279)||(7681311-7681368)
chr2 (234-279)||(41778848-41778893)
chr2 (235-279)||(31795893-31795937)
chr2 (243-279)||(37740015-37740051)
chr2 (221-279)||(2381111-2381169)
chr2 (221-279)||(9427047-9427105)
chr2 (221-279)||(35736237-35736295)
chr2 (221-279)||(41841744-41841802)
chr2 (234-279)||(39821744-39821789)
chr2 (221-265)||(9591973-9592017)
chr2 (243-279)||(12751899-12751935)
chr2 (230-278)||(28262568-28262616)
chr2 (240-279)||(6721746-6721785)
chr2 (221-275)||(12541827-12541882)
chr2 (244-279)||(17379897-17379932)
chr2 (233-279)||(886990-887036)
chr2 (221-279)||(3094477-3094535)
chr2 (221-279)||(22356027-22356085)
chr2 (232-278)||(39354299-39354345)
chr2 (221-279)||(45257369-45257427)
[»] chr4 (28 HSPs)
chr4 (221-277)||(54935130-54935186)
chr4 (221-279)||(35248748-35248806)
chr4 (221-279)||(1968483-1968541)
chr4 (221-279)||(27735807-27735865)
chr4 (221-279)||(36151638-36151696)
chr4 (221-279)||(37711205-37711263)
chr4 (232-279)||(6891433-6891480)
chr4 (221-279)||(5730954-5731012)
chr4 (221-279)||(26166999-26167057)
chr4 (221-279)||(45741952-45742010)
chr4 (221-279)||(31348445-31348503)
chr4 (221-279)||(54320496-54320554)
chr4 (235-279)||(47433832-47433876)
chr4 (221-279)||(2917087-2917145)
chr4 (229-279)||(16400870-16400920)
chr4 (221-279)||(28332866-28332924)
chr4 (221-279)||(34995113-34995171)
chr4 (233-279)||(44784066-44784112)
chr4 (225-279)||(49735592-49735646)
chr4 (221-279)||(56135811-56135869)
chr4 (230-279)||(46007825-46007874)
chr4 (221-279)||(17938231-17938290)
chr4 (221-279)||(22921043-22921102)
chr4 (221-279)||(22970697-22970756)
chr4 (221-279)||(45132625-45132677)
chr4 (240-279)||(55510251-55510290)
chr4 (221-279)||(41174407-41174465)
chr4 (221-279)||(43961472-43961530)
[»] chr3 (29 HSPs)
chr3 (221-279)||(25655096-25655154)
chr3 (221-279)||(46204948-46205006)
chr3 (221-279)||(21773844-21773902)
chr3 (221-279)||(14898038-14898096)
chr3 (221-279)||(18654724-18654782)
chr3 (221-279)||(24560279-24560337)
chr3 (221-279)||(27542055-27542113)
chr3 (221-279)||(41110445-41110503)
chr3 (221-279)||(46556205-46556263)
chr3 (221-279)||(10748421-10748479)
chr3 (233-279)||(16275829-16275875)
chr3 (221-275)||(30200219-30200273)
chr3 (230-279)||(651802-651851)
chr3 (230-279)||(54574485-54574534)
chr3 (231-279)||(2387884-2387932)
chr3 (240-279)||(36569027-36569066)
chr3 (221-279)||(37102272-37102331)
chr3 (232-279)||(51819249-51819296)
chr3 (221-279)||(220521-220579)
chr3 (221-279)||(28582633-28582691)
chr3 (235-272)||(31684362-31684399)
chr3 (221-279)||(10943738-10943796)
chr3 (221-279)||(40858627-40858685)
chr3 (221-279)||(42699736-42699794)
chr3 (229-279)||(43005863-43005913)
chr3 (221-279)||(48683674-48683732)
chr3 (221-279)||(52473977-52474035)
chr3 (235-272)||(31894019-31894056)
chr3 (231-275)||(12790444-12790488)
[»] chr8 (30 HSPs)
chr8 (222-279)||(6315125-6315182)
chr8 (221-279)||(41103630-41103688)
chr8 (221-279)||(42650460-42650518)
chr8 (221-279)||(1026973-1027030)
chr8 (221-279)||(11575530-11575588)
chr8 (221-279)||(16653011-16653069)
chr8 (233-279)||(31543196-31543242)
chr8 (232-279)||(7503078-7503125)
chr8 (221-279)||(7979202-7979260)
chr8 (221-279)||(11785588-11785646)
chr8 (221-279)||(37032441-37032499)
chr8 (221-279)||(40990308-40990366)
chr8 (234-279)||(30664436-30664481)
chr8 (232-279)||(29358463-29358510)
chr8 (240-279)||(30479841-30479880)
chr8 (221-279)||(1281205-1281263)
chr8 (221-279)||(9718603-9718661)
chr8 (233-279)||(28083816-28083862)
chr8 (221-279)||(31738485-31738543)
chr8 (241-279)||(34633819-34633857)
chr8 (221-279)||(37923202-37923260)
chr8 (230-279)||(3726979-3727028)
chr8 (232-279)||(2248525-2248572)
chr8 (221-272)||(11033479-11033530)
chr8 (236-279)||(35694879-35694922)
chr8 (221-279)||(10028172-10028230)
chr8 (221-279)||(12022267-12022325)
chr8 (230-279)||(36308913-36308963)
chr8 (238-279)||(4247641-4247682)
chr8 (234-279)||(27487065-27487110)
[»] chr7 (30 HSPs)
chr7 (228-279)||(34228442-34228493)
chr7 (221-279)||(1051622-1051680)
chr7 (221-279)||(40196656-40196714)
chr7 (221-279)||(41497081-41497139)
chr7 (231-279)||(33655232-33655280)
chr7 (232-279)||(24970289-24970336)
chr7 (221-279)||(25887254-25887312)
chr7 (221-279)||(39855989-39856047)
chr7 (221-279)||(40572358-40572416)
chr7 (221-279)||(47390917-47390975)
chr7 (240-279)||(22163233-22163272)
chr7 (240-279)||(22221941-22221980)
chr7 (221-279)||(34235131-34235190)
chr7 (221-279)||(17852933-17852991)
chr7 (221-279)||(43230298-43230356)
chr7 (221-269)||(13771080-13771128)
chr7 (223-279)||(26365832-26365888)
chr7 (234-278)||(48152055-48152099)
chr7 (221-279)||(33519110-33519168)
chr7 (221-279)||(37417757-37417815)
chr7 (221-274)||(41008244-41008298)
chr7 (221-279)||(42306396-42306454)
chr7 (230-279)||(45940780-45940829)
chr7 (243-279)||(18063685-18063721)
chr7 (232-279)||(30891119-30891165)
chr7 (221-279)||(42087057-42087115)
chr7 (221-277)||(18795721-18795777)
chr7 (251-279)||(20393693-20393721)
chr7 (243-279)||(23116384-23116420)
chr7 (221-265)||(48013564-48013608)
[»] chr5 (23 HSPs)
chr5 (221-279)||(7544198-7544256)
chr5 (221-279)||(8502959-8503017)
chr5 (221-279)||(11756939-11756997)
chr5 (221-279)||(9856942-9857000)
chr5 (221-279)||(26414955-26415013)
chr5 (240-279)||(10476109-10476148)
chr5 (224-279)||(16938544-16938599)
chr5 (221-272)||(22022912-22022963)
chr5 (221-279)||(13634773-13634831)
chr5 (221-279)||(36392274-36392331)
chr5 (230-279)||(2550476-2550525)
chr5 (234-279)||(10072771-10072816)
chr5 (222-279)||(42681516-42681573)
chr5 (240-276)||(10650510-10650546)
chr5 (232-279)||(9798736-9798783)
chr5 (221-279)||(4373690-4373748)
chr5 (241-279)||(20513573-20513611)
chr5 (225-279)||(36363098-36363152)
chr5 (234-279)||(17024348-17024393)
chr5 (243-279)||(28279600-28279636)
chr5 (221-279)||(5688475-5688533)
chr5 (221-279)||(37606957-37607014)
chr5 (232-273)||(14681542-14681583)
[»] chr1 (25 HSPs)
chr1 (221-279)||(2859056-2859114)
chr1 (221-279)||(30010394-30010452)
chr1 (221-279)||(32951442-32951500)
chr1 (221-279)||(8529861-8529919)
chr1 (225-279)||(38510018-38510072)
chr1 (221-279)||(50744405-50744463)
chr1 (221-279)||(51597730-51597788)
chr1 (231-279)||(44211029-44211077)
chr1 (221-276)||(12234072-12234127)
chr1 (221-279)||(40095057-40095116)
chr1 (221-279)||(10391934-10391992)
chr1 (221-275)||(45585813-45585867)
chr1 (234-279)||(26940967-26941012)
chr1 (230-279)||(49946712-49946761)
chr1 (221-279)||(1085614-1085672)
chr1 (221-279)||(35349586-35349644)
chr1 (243-279)||(41676363-41676399)
chr1 (240-279)||(42230619-42230658)
chr1 (221-279)||(2506601-2506659)
chr1 (221-279)||(33643330-33643388)
chr1 (221-279)||(41498466-41498524)
chr1 (225-279)||(50079508-50079562)
chr1 (230-279)||(6563648-6563697)
chr1 (234-275)||(42742438-42742478)
chr1 (229-273)||(2470865-2470909)
[»] chr6 (22 HSPs)
chr6 (230-275)||(12811108-12811153)
chr6 (221-277)||(5585428-5585484)
chr6 (221-279)||(21606968-21607026)
chr6 (230-279)||(2893701-2893750)
chr6 (232-279)||(13583792-13583839)
chr6 (221-276)||(19278165-19278220)
chr6 (225-279)||(30487429-30487483)
chr6 (221-279)||(33236013-33236071)
chr6 (221-279)||(34176397-34176455)
chr6 (230-279)||(31849181-31849230)
chr6 (230-279)||(33041541-33041590)
chr6 (234-274)||(6034201-6034241)
chr6 (225-279)||(2892727-2892781)
chr6 (221-279)||(26318367-26318425)
chr6 (243-279)||(4097636-4097672)
chr6 (221-279)||(1390381-1390440)
chr6 (240-279)||(14515552-14515591)
chr6 (232-279)||(16738120-16738167)
chr6 (221-279)||(30850036-30850094)
chr6 (230-279)||(25741478-25741527)
chr6 (243-279)||(5381307-5381343)
chr6 (251-279)||(32926737-32926765)
[»] scaffold0262 (1 HSPs)
scaffold0262 (230-279)||(16420-16469)
[»] scaffold0067 (1 HSPs)
scaffold0067 (221-273)||(39320-39372)
[»] scaffold0294 (1 HSPs)
scaffold0294 (235-279)||(15339-15383)
[»] scaffold0096 (1 HSPs)
scaffold0096 (221-279)||(6646-6704)
[»] scaffold0171 (1 HSPs)
scaffold0171 (221-277)||(16012-16068)
[»] scaffold0341 (1 HSPs)
scaffold0341 (230-279)||(18841-18890)


Alignment Details
Target: chr2 (Bit Score: 188; Significance: 1e-102; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 17 - 279
Target Start/End: Original strand, 16565632 - 16565897
Alignment:
Q  17 tgtatagtgattgttctgtcttcaaacgtacttaccttttgcagctataatatcaacaccaacaaaacagtaatgatgactactattattgttttcatgg 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16565632 tgtatagtgattgttctgtcttcaaacgtacttaccttttgcagctataatatcaacaccaacaaaacagtaatgatgactactattattgttttcatgg 16565731  T
Q  117 tc----tatatatctgaatggatggaaatcaagattctctttcgtagttcactattttaaatcacctgcattccgtctgaatatgatttatgagtannnn 212  Q
    ||    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |        
T  16565732 tctatatatatatctgaatggatggaaatcaagagtctctttcgtagttcactattttaaatcacctgcattccgtctgaatatgatttatgagca---t 16565828  T
Q  213 nnnnnnnnaaattacgaac--tatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
            |||||||||||  ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  16565829 ttttttttaaattacgaactatatataacatgtttttctaaaataaattaagtgtgattgaagtattat 16565897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 221 - 279
Target Start/End: Complemental strand, 19567003 - 19566945
Alignment:
Q  221 aaattacgaactatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  19567003 aaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagtattat 19566945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 221 - 279
Target Start/End: Complemental strand, 36347723 - 36347665
Alignment:
Q  221 aaattacgaactatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  36347723 aaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagtattat 36347665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 221 - 279
Target Start/End: Original strand, 2241472 - 2241530
Alignment:
Q  221 aaattacgaactatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    |||||||| ||||||||||| |||||||||||||||||||||||| |||||||||||||    
T  2241472 aaattacggactatataatacgtttttctaaaataaattaagtgtaattgaagtattat 2241530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 221 - 279
Target Start/End: Original strand, 40022432 - 40022490
Alignment:
Q  221 aaattacgaactatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    |||||| ||||||||||| |||||||| |||||||||||||||||||||||||||||||    
T  40022432 aaattatgaactatataacatgtttttgtaaaataaattaagtgtgattgaagtattat 40022490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 221 - 279
Target Start/End: Complemental strand, 15224876 - 15224818
Alignment:
Q  221 aaattacgaactatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    ||||||||  |||||||| ||||||||||| ||||||||||||||||||||||||||||    
T  15224876 aaattacgggctatataacatgtttttctagaataaattaagtgtgattgaagtattat 15224818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 232 - 279
Target Start/End: Complemental strand, 29525904 - 29525857
Alignment:
Q  232 tatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    |||||||||||||||| ||||||||||||| |||||||||||||||||    
T  29525904 tatataatatgtttttttaaaataaattaaatgtgattgaagtattat 29525857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 233 - 279
Target Start/End: Complemental strand, 8427041 - 8426995
Alignment:
Q  233 atataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    |||||| ||||||||||||||||||||||||| ||||||||||||||    
T  8427041 atataacatgtttttctaaaataaattaagtgcgattgaagtattat 8426995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 225 - 279
Target Start/End: Original strand, 23748161 - 23748215
Alignment:
Q  225 tacgaactatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    |||| ||||||||| ||||||||| ||||||||| ||||||||||||||||||||    
T  23748161 tacggactatataacatgtttttcaaaaataaatcaagtgtgattgaagtattat 23748215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 221 - 279
Target Start/End: Complemental strand, 36567033 - 36566975
Alignment:
Q  221 aaattacgaactatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    |||||| ||| ||||||| ||||||||||| |||||||||| |||||||||||||||||    
T  36567033 aaattatgaattatataacatgtttttctataataaattaattgtgattgaagtattat 36566975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 221 - 279
Target Start/End: Complemental strand, 39732910 - 39732853
Alignment:
Q  221 aaattacgaactatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    |||||||| ||||||||  |||||||||||||||||||||||| |||||||||||||||    
T  39732910 aaattacggactatatac-atgtttttctaaaataaattaagtatgattgaagtattat 39732853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 222 - 279
Target Start/End: Original strand, 7681311 - 7681368
Alignment:
Q  222 aattacgaactatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    ||||||| | |||||||||  ||||| |||||||||||||||||||||||||||||||    
T  7681311 aattacggattatataatagttttttgtaaaataaattaagtgtgattgaagtattat 7681368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 234 - 279
Target Start/End: Original strand, 41778848 - 41778893
Alignment:
Q  234 tataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    ||||| |||||||| |||||||||||||||||||||||||||||||    
T  41778848 tataaaatgtttttttaaaataaattaagtgtgattgaagtattat 41778893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 235 - 279
Target Start/End: Complemental strand, 31795937 - 31795893
Alignment:
Q  235 ataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    |||| |||||||| |||||||||||||||||||||||||||||||    
T  31795937 ataacatgtttttttaaaataaattaagtgtgattgaagtattat 31795893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 243 - 279
Target Start/End: Complemental strand, 37740051 - 37740015
Alignment:
Q  243 tttttctaaaataaattaagtgtgattgaagtattat 279  Q
    |||||||||||||||||||||||||||||||||||||    
T  37740051 tttttctaaaataaattaagtgtgattgaagtattat 37740015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 279
Target Start/End: Complemental strand, 2381169 - 2381111
Alignment:
Q  221 aaattacgaactatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    ||||||||||| || ||| |||||||| |||||||||||||||||  ||||||||||||    
T  2381169 aaattacgaacaatgtaaaatgtttttttaaaataaattaagtgtttttgaagtattat 2381111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 279
Target Start/End: Original strand, 9427047 - 9427105
Alignment:
Q  221 aaattacgaactatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    ||||||| |||||||||| ||||||||| ||| ||||||| | ||||||||||||||||    
T  9427047 aaattaccaactatataacatgtttttcaaaactaaattatgcgtgattgaagtattat 9427105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 279
Target Start/End: Original strand, 35736237 - 35736295
Alignment:
Q  221 aaattacgaactatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    |||| ||| |||| |||| ||||||||||||||||||| |||||||| |||||||||||    
T  35736237 aaatcacggactagataacatgtttttctaaaataaatgaagtgtgactgaagtattat 35736295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 279
Target Start/End: Original strand, 41841744 - 41841802
Alignment:
Q  221 aaattacgaactatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    ||||||| |||||||||| || |||| ||||||||||||||| ||||||| ||||||||    
T  41841744 aaattaccaactatataacatattttcctaaaataaattaagggtgattggagtattat 41841802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 234 - 279
Target Start/End: Original strand, 39821744 - 39821789
Alignment:
Q  234 tataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    ||||| ||||||||||||||||||||||||| |||| |||||||||    
T  39821744 tataacatgtttttctaaaataaattaagtgcgatttaagtattat 39821789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 265
Target Start/End: Complemental strand, 9592017 - 9591973
Alignment:
Q  221 aaattacgaactatataatatgtttttctaaaataaattaagtgt 265  Q
    |||||||| ||||||||| |||||||||||||||| |||||||||    
T  9592017 aaattacgcactatataacatgtttttctaaaatatattaagtgt 9591973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 279
Target Start/End: Original strand, 12751899 - 12751935
Alignment:
Q  243 tttttctaaaataaattaagtgtgattgaagtattat 279  Q
    |||||||||||||| ||||||||||||||||||||||    
T  12751899 tttttctaaaataatttaagtgtgattgaagtattat 12751935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 230 - 278
Target Start/End: Complemental strand, 28262616 - 28262568
Alignment:
Q  230 actatataatatgtttttctaaaataaattaagtgtgattgaagtatta 278  Q
    ||||||||| |||||||||||||||||||||  |||||||||| |||||    
T  28262616 actatataacatgtttttctaaaataaattacatgtgattgaaatatta 28262568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 240 - 279
Target Start/End: Complemental strand, 6721785 - 6721746
Alignment:
Q  240 atgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    ||||||||||||||||||| ||||||||||||| ||||||    
T  6721785 atgtttttctaaaataaatcaagtgtgattgaaatattat 6721746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 221 - 275
Target Start/End: Original strand, 12541827 - 12541882
Alignment:
Q  221 aaattacgaactatataatatgtttt-tctaaaataaattaagtgtgattgaagta 275  Q
    |||||||| ||||||||| || |||| |||||||||||||||||| ||||||||||    
T  12541827 aaattacggactatataaaatattttttctaaaataaattaagtgcgattgaagta 12541882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 244 - 279
Target Start/End: Original strand, 17379897 - 17379932
Alignment:
Q  244 ttttctaaaataaattaagtgtgattgaagtattat 279  Q
    ||||||||||||||||||||||||||| ||||||||    
T  17379897 ttttctaaaataaattaagtgtgattggagtattat 17379932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 233 - 279
Target Start/End: Original strand, 886990 - 887036
Alignment:
Q  233 atataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    |||||| ||| |||| |||||||||||| ||||||||||||||||||    
T  886990 atataaaatgcttttttaaaataaattatgtgtgattgaagtattat 887036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 221 - 279
Target Start/End: Complemental strand, 3094535 - 3094477
Alignment:
Q  221 aaattacgaactatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    ||||||| |||||| ||| ||||||||||||||||||||  ||||  ||||||||||||    
T  3094535 aaattacaaactatgtaaaatgtttttctaaaataaatttcgtgtttttgaagtattat 3094477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 221 - 279
Target Start/End: Original strand, 22356027 - 22356085
Alignment:
Q  221 aaattacgaactatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    ||||||||||| || ||| |||||||| ||||||| |||||||||  ||||||||||||    
T  22356027 aaattacgaacaatgtaaaatgtttttttaaaatagattaagtgtttttgaagtattat 22356085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 232 - 278
Target Start/End: Complemental strand, 39354345 - 39354299
Alignment:
Q  232 tatataatatgtttttctaaaataaattaagtgtgattgaagtatta 278  Q
    ||||||| |||||| ||||||||||| | ||||||||||||||||||    
T  39354345 tatataacatgtttatctaaaataaagttagtgtgattgaagtatta 39354299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 221 - 279
Target Start/End: Original strand, 45257369 - 45257427
Alignment:
Q  221 aaattacgaactatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    ||||||||||| || ||| |||||||  |||||||||||||||||  ||||||||||||    
T  45257369 aaattacgaacaatgtaaaatgttttcttaaaataaattaagtgtttttgaagtattat 45257427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 53; Significance: 2e-21; HSPs: 28)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 221 - 277
Target Start/End: Original strand, 54935130 - 54935186
Alignment:
Q  221 aaattacgaactatataatatgtttttctaaaataaattaagtgtgattgaagtatt 277  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  54935130 aaattacgaactatataacatgtttttctaaaataaattaagtgtgattgaagtatt 54935186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 221 - 279
Target Start/End: Original strand, 35248748 - 35248806
Alignment:
Q  221 aaattacgaactatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  35248748 aaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagtattat 35248806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 221 - 279
Target Start/End: Complemental strand, 1968541 - 1968483
Alignment:
Q  221 aaattacgaactatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    |||||||| ||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  1968541 aaattacggactatataatatgtttttctaaaataaatcaggtgtgattgaagtattat 1968483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 221 - 279
Target Start/End: Original strand, 27735807 - 27735865
Alignment:
Q  221 aaattacgaactatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    |||||||| ||||||||| |||||||| |||||||||||||||||||||||||||||||    
T  27735807 aaattacggactatataacatgtttttttaaaataaattaagtgtgattgaagtattat 27735865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 221 - 279
Target Start/End: Original strand, 36151638 - 36151696
Alignment:
Q  221 aaattacgaactatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    |||||||  ||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  36151638 aaattacagactatataacatgtttttctaaaataaattaagtgtgattgaagtattat 36151696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 221 - 279
Target Start/End: Original strand, 37711205 - 37711263
Alignment:
Q  221 aaattacgaactatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    |||||||| ||||||||| |||||| |||||||||||||||||||||||||||||||||    
T  37711205 aaattacggactatataacatgtttctctaaaataaattaagtgtgattgaagtattat 37711263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 232 - 279
Target Start/End: Original strand, 6891433 - 6891480
Alignment:
Q  232 tatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  6891433 tatataacatgtttttctaaaataaattaagtgtgattgaagtattat 6891480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 221 - 279
Target Start/End: Complemental strand, 5731012 - 5730954
Alignment:
Q  221 aaattacgaactatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    |||||||| ||||||||| |||||| ||||||||||||||||||| |||||||||||||    
T  5731012 aaattacggactatataacatgtttctctaaaataaattaagtgtaattgaagtattat 5730954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 221 - 279
Target Start/End: Original strand, 26166999 - 26167057
Alignment:
Q  221 aaattacgaactatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    |||||||  ||||||||| |||||| |||||||||||||||||||||||||||||||||    
T  26166999 aaattacagactatataacatgtttctctaaaataaattaagtgtgattgaagtattat 26167057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 221 - 279
Target Start/End: Original strand, 45741952 - 45742010
Alignment:
Q  221 aaattacgaactatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    |||||||| |||||||||  ||||||||||||||||||||| |||||||||||||||||    
T  45741952 aaattacggactatataacttgtttttctaaaataaattaaatgtgattgaagtattat 45742010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 221 - 279
Target Start/End: Complemental strand, 31348503 - 31348445
Alignment:
Q  221 aaattacgaactatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    |||| ||| ||||||||| ||||||||||||||||||||| ||||||||||| ||||||    
T  31348503 aaataacggactatataacatgtttttctaaaataaattatgtgtgattgaattattat 31348445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 221 - 279
Target Start/End: Original strand, 54320496 - 54320554
Alignment:
Q  221 aaattacgaactatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    |||||||  ||||||||  ||||||||||||||||||||||||||||||| ||||||||    
T  54320496 aaattaccgactatatatcatgtttttctaaaataaattaagtgtgattggagtattat 54320554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 235 - 279
Target Start/End: Complemental strand, 47433876 - 47433832
Alignment:
Q  235 ataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    |||| |||||||| |||||||||||||||||||||||||||||||    
T  47433876 ataacatgtttttttaaaataaattaagtgtgattgaagtattat 47433832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 279
Target Start/End: Complemental strand, 2917145 - 2917087
Alignment:
Q  221 aaattacgaactatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    ||||| || ||||||||| ||| |||||||||||||||| | |||||||||||||||||    
T  2917145 aaattccggactatataacatgattttctaaaataaatttattgtgattgaagtattat 2917087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 229 - 279
Target Start/End: Original strand, 16400870 - 16400920
Alignment:
Q  229 aactatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    ||||||| || |||||||||||||||||||||| | |||||||||||||||    
T  16400870 aactatacaacatgtttttctaaaataaattaattatgattgaagtattat 16400920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 279
Target Start/End: Original strand, 28332866 - 28332924
Alignment:
Q  221 aaattacgaactatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    |||||||  ||||||||| | ||||||||||| |||||||||| |||||||||||||||    
T  28332866 aaattacatactatataacaggtttttctaaagtaaattaagtatgattgaagtattat 28332924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 279
Target Start/End: Original strand, 34995113 - 34995171
Alignment:
Q  221 aaattacgaactatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    ||||||||||| || | | ||||||||||||||||||||||||||  ||||||||||||    
T  34995113 aaattacgaacaatgtgaaatgtttttctaaaataaattaagtgtttttgaagtattat 34995171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 233 - 279
Target Start/End: Original strand, 44784066 - 44784112
Alignment:
Q  233 atataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    |||||| | ||||||||||| ||||||||||||||||||||||||||    
T  44784066 atataacaggtttttctaaagtaaattaagtgtgattgaagtattat 44784112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 225 - 279
Target Start/End: Complemental strand, 49735646 - 49735592
Alignment:
Q  225 tacgaactatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    |||| ||||||||| ||||||||||||||||||| ||||||||| ||| ||||||    
T  49735646 tacggactatataacatgtttttctaaaataaatcaagtgtgatagaaatattat 49735592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 279
Target Start/End: Original strand, 56135811 - 56135869
Alignment:
Q  221 aaattacgaactatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    ||||||||||| || ||| |||||||| |||||||||||||||||  ||||||||||||    
T  56135811 aaattacgaacaatgtaaaatgtttttttaaaataaattaagtgtttttgaagtattat 56135869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 230 - 279
Target Start/End: Complemental strand, 46007874 - 46007825
Alignment:
Q  230 actatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    |||||||||  ||||||| |||||||||||||||| ||||||||||||||    
T  46007874 actatataacttgtttttgtaaaataaattaagtgagattgaagtattat 46007825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 221 - 279
Target Start/End: Complemental strand, 17938290 - 17938231
Alignment:
Q  221 aaattacgaactatataatatgtttttcta-aaataaattaagtgtgattgaagtattat 279  Q
    ||||||| |||||||||| || ||||| |  |||||||||||||||||||||||||||||    
T  17938290 aaattacaaactatataacatatttttttttaaataaattaagtgtgattgaagtattat 17938231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 221 - 279
Target Start/End: Original strand, 22921043 - 22921102
Alignment:
Q  221 aaattacgaactatataatatgtttttctaaaataaat-taagtgtgattgaagtattat 279  Q
    ||||||| ||||| |||| ||||||||||| |||||||  ||||||||||||||||||||    
T  22921043 aaattacaaactacataacatgtttttctagaataaatcaaagtgtgattgaagtattat 22921102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 221 - 279
Target Start/End: Complemental strand, 22970756 - 22970697
Alignment:
Q  221 aaattacgaactatataatatgtttttctaaaataaat-taagtgtgattgaagtattat 279  Q
    ||||||| ||||| |||| ||||||||||| |||||||  ||||||||||||||||||||    
T  22970756 aaattacaaactacataacatgtttttctagaataaatcaaagtgtgattgaagtattat 22970697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 221 - 279
Target Start/End: Complemental strand, 45132677 - 45132625
Alignment:
Q  221 aaattacgaactatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    |||||||| ||||||||||||||      ||||||||||||||||||||||||||||||    
T  45132677 aaattacggactatataatatgt------aaaataaattaagtgtgattgaagtattat 45132625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 240 - 279
Target Start/End: Original strand, 55510251 - 55510290
Alignment:
Q  240 atgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    |||||||| ||||||||||||||||||| |||||||||||    
T  55510251 atgtttttttaaaataaattaagtgtgactgaagtattat 55510290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 221 - 279
Target Start/End: Original strand, 41174407 - 41174465
Alignment:
Q  221 aaattacgaactatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    |||||| | ||||||||  ||||||||||||||||||| || ||||||||| |||||||    
T  41174407 aaattagggactatatagcatgtttttctaaaataaatcaaatgtgattgatgtattat 41174465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 221 - 279
Target Start/End: Original strand, 43961472 - 43961530
Alignment:
Q  221 aaattacgaactatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    |||||| |||| || ||| |||||||| |||||||||||||||||  ||||||||||||    
T  43961472 aaattatgaacaatgtaaaatgtttttttaaaataaattaagtgtttttgaagtattat 43961530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 51; Significance: 3e-20; HSPs: 29)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 221 - 279
Target Start/End: Complemental strand, 25655154 - 25655096
Alignment:
Q  221 aaattacgaactatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  25655154 aaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagtattat 25655096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 221 - 279
Target Start/End: Original strand, 46204948 - 46205006
Alignment:
Q  221 aaattacgaactatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  46204948 aaattatgaactatataacatgtttttctaaaataaattaagtgtgattgaagtattat 46205006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 221 - 279
Target Start/End: Original strand, 21773844 - 21773902
Alignment:
Q  221 aaattacgaactatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    |||||||| ||||||||| |||||||||||||||||||||||||||||||||| |||||    
T  21773844 aaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagaattat 21773902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 221 - 279
Target Start/End: Original strand, 14898038 - 14898096
Alignment:
Q  221 aaattacgaactatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    |||||||  ||||||| | ||||||||||||||||||||||||||||||||||||||||    
T  14898038 aaattacagactatatgacatgtttttctaaaataaattaagtgtgattgaagtattat 14898096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 221 - 279
Target Start/End: Complemental strand, 18654782 - 18654724
Alignment:
Q  221 aaattacgaactatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    |||||||| ||||||||| |||||| ||||||||||||||||||| |||||||||||||    
T  18654782 aaattacggactatataacatgtttctctaaaataaattaagtgtaattgaagtattat 18654724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 221 - 279
Target Start/End: Original strand, 24560279 - 24560337
Alignment:
Q  221 aaattacgaactatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    |||||||| ||||| ||| |||||||||||||||||||||| |||||||||||||||||    
T  24560279 aaattacggactatgtaacatgtttttctaaaataaattaaatgtgattgaagtattat 24560337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 221 - 279
Target Start/End: Complemental strand, 27542113 - 27542055
Alignment:
Q  221 aaattacgaactatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    |||||| ||||||||||| || ||||||||||||||||||| |||||||||||||||||    
T  27542113 aaattatgaactatataacatatttttctaaaataaattaactgtgattgaagtattat 27542055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 221 - 279
Target Start/End: Complemental strand, 41110503 - 41110445
Alignment:
Q  221 aaattacgaactatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    |||||||| |||| |||| ||||||||| ||||||||||||||||||||||||||||||    
T  41110503 aaattacggactagataacatgtttttcgaaaataaattaagtgtgattgaagtattat 41110445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 221 - 279
Target Start/End: Original strand, 46556205 - 46556263
Alignment:
Q  221 aaattacgaactatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    |||||||  ||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  46556205 aaattacagactatataatatgtttttccaaaataaattgagtgtgattgaagtattat 46556263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 221 - 279
Target Start/End: Complemental strand, 10748479 - 10748421
Alignment:
Q  221 aaattacgaactatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    |||||||| | ||||||| |||||||||||||||||||||||||||||  |||||||||    
T  10748479 aaattacggagtatataacatgtttttctaaaataaattaagtgtgataaaagtattat 10748421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 233 - 279
Target Start/End: Complemental strand, 16275875 - 16275829
Alignment:
Q  233 atataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    |||||| ||||||||||||||||||| ||||||||||||||||||||    
T  16275875 atataacatgtttttctaaaataaatcaagtgtgattgaagtattat 16275829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 221 - 275
Target Start/End: Complemental strand, 30200273 - 30200219
Alignment:
Q  221 aaattacgaactatataatatgtttttctaaaataaattaagtgtgattgaagta 275  Q
    |||||||| ||||||||| ||||||||||||||||||| |||||||||| |||||    
T  30200273 aaattacggactatataacatgtttttctaaaataaatcaagtgtgattaaagta 30200219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 230 - 279
Target Start/End: Original strand, 651802 - 651851
Alignment:
Q  230 actatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    ||||||||| |||||||||||||||||||||||||||||| || ||||||    
T  651802 actatataacatgtttttctaaaataaattaagtgtgattaaaatattat 651851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 230 - 279
Target Start/End: Complemental strand, 54574534 - 54574485
Alignment:
Q  230 actatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    ||||||||| | ||||||||||||||||||||| ||||||||||||||||    
T  54574534 actatataacacgtttttctaaaataaattaagcgtgattgaagtattat 54574485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 231 - 279
Target Start/End: Complemental strand, 2387932 - 2387884
Alignment:
Q  231 ctatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    |||||||| |||||||||||||||||||||||||||||| || ||||||    
T  2387932 ctatataacatgtttttctaaaataaattaagtgtgattaaattattat 2387884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 240 - 279
Target Start/End: Complemental strand, 36569066 - 36569027
Alignment:
Q  240 atgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    ||||||||||||||||||||||||||||||||| ||||||    
T  36569066 atgtttttctaaaataaattaagtgtgattgaactattat 36569027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 221 - 279
Target Start/End: Complemental strand, 37102331 - 37102272
Alignment:
Q  221 aaattacgaactatataatatgttttt-ctaaaataaattaagtgtgattgaagtattat 279  Q
    |||||||| ||||||||| |||||||| ||||||||||| ||||||| ||||||||||||    
T  37102331 aaattacggactatataacatgttttttctaaaataaatcaagtgtggttgaagtattat 37102272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 232 - 279
Target Start/End: Complemental strand, 51819296 - 51819249
Alignment:
Q  232 tatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    |||||||||| ||||| ||||||||||| |||||||||||||||||||    
T  51819296 tatataatatatttttttaaaataaatttagtgtgattgaagtattat 51819249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 279
Target Start/End: Complemental strand, 220579 - 220521
Alignment:
Q  221 aaattacgaactatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    |||||||| ||||| ||| ||||||||||||||||||| |||| |||||||||| ||||    
T  220579 aaattacggactatgtaacatgtttttctaaaataaatcaagtatgattgaagtgttat 220521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 279
Target Start/End: Complemental strand, 28582691 - 28582633
Alignment:
Q  221 aaattacgaactatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    |||||||| || |||||| |||||||||||| |||||| ||||||| ||||||||||||    
T  28582691 aaattacggacgatataacatgtttttctaagataaatcaagtgtggttgaagtattat 28582633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 235 - 272
Target Start/End: Original strand, 31684362 - 31684399
Alignment:
Q  235 ataatatgtttttctaaaataaattaagtgtgattgaa 272  Q
    |||| |||||||||||||||||||||||||||||||||    
T  31684362 ataacatgtttttctaaaataaattaagtgtgattgaa 31684399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 221 - 279
Target Start/End: Complemental strand, 10943796 - 10943738
Alignment:
Q  221 aaattacgaactatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    ||||||||||| ||  || |||||||| |||||||||||||||||  ||||||||||||    
T  10943796 aaattacgaacaatgcaaaatgtttttttaaaataaattaagtgtttttgaagtattat 10943738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 221 - 279
Target Start/End: Original strand, 40858627 - 40858685
Alignment:
Q  221 aaattacgaactatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    ||||||||||| || ||| |||||||| ||||||||||| |||||  ||||||||||||    
T  40858627 aaattacgaacaatgtaaaatgtttttttaaaataaatttagtgtttttgaagtattat 40858685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 221 - 279
Target Start/End: Complemental strand, 42699794 - 42699736
Alignment:
Q  221 aaattacgaactatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    ||||||||||| |||||| || |||||  ||||||||||||||||  ||||||||||||    
T  42699794 aaattacgaacaatataaaatatttttaaaaaataaattaagtgtttttgaagtattat 42699736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 279
Target Start/End: Complemental strand, 43005913 - 43005863
Alignment:
Q  229 aactatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    |||||||||| || ||||||||||||||||| | | |||||||||||||||    
T  43005913 aactatataacatatttttctaaaataaatttaatttgattgaagtattat 43005863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 221 - 279
Target Start/End: Original strand, 48683674 - 48683732
Alignment:
Q  221 aaattacgaactatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    ||||||||||| || ||| |||||||| |||||||||||||||||  ||||| ||||||    
T  48683674 aaattacgaacaatgtaaaatgtttttttaaaataaattaagtgtttttgaaatattat 48683732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 221 - 279
Target Start/End: Original strand, 52473977 - 52474035
Alignment:
Q  221 aaattacgaactatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    |||||||| | ||||||| ||||| || ||||||||||||  |||||||||||||||||    
T  52473977 aaattacggattatataacatgttattttaaaataaattacatgtgattgaagtattat 52474035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 272
Target Start/End: Complemental strand, 31894056 - 31894019
Alignment:
Q  235 ataatatgtttttctaaaataaattaagtgtgattgaa 272  Q
    |||| |||||||||||||||||||||| ||||||||||    
T  31894056 ataacatgtttttctaaaataaattaaatgtgattgaa 31894019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 231 - 275
Target Start/End: Original strand, 12790444 - 12790488
Alignment:
Q  231 ctatataatatgtttttctaaaataaattaagtgtgattgaagta 275  Q
    |||||||| ||||||||||| |||||||||||||| || ||||||    
T  12790444 ctatataacatgtttttctataataaattaagtgtaatcgaagta 12790488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 50; Significance: 1e-19; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 222 - 279
Target Start/End: Original strand, 6315125 - 6315182
Alignment:
Q  222 aattacgaactatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  6315125 aattacggactatataacatgtttttctaaaataaattaagtgtgattgaagtattat 6315182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 221 - 279
Target Start/End: Complemental strand, 41103688 - 41103630
Alignment:
Q  221 aaattacgaactatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    ||||||| | |||||||| ||||||||||||||||||||||||||||||||||||||||    
T  41103688 aaattacaagctatataacatgtttttctaaaataaattaagtgtgattgaagtattat 41103630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 221 - 279
Target Start/End: Complemental strand, 42650518 - 42650460
Alignment:
Q  221 aaattacgaactatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    |||||||| | ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  42650518 aaattacggaatatataacatgtttttctaaaataaattaagtgtgattgaagtattat 42650460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 221 - 279
Target Start/End: Complemental strand, 1027030 - 1026973
Alignment:
Q  221 aaattacgaactatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    |||||||| ||||||||| |||||||||||||||||||||||| |||||||||||||||    
T  1027030 aaattacggactatataa-atgtttttctaaaataaattaagtatgattgaagtattat 1026973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 221 - 279
Target Start/End: Complemental strand, 11575588 - 11575530
Alignment:
Q  221 aaattacgaactatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    ||||||| || ||||||| |||||||||||||||||||||||||||||| |||||||||    
T  11575588 aaattacaaattatataacatgtttttctaaaataaattaagtgtgattaaagtattat 11575530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 221 - 279
Target Start/End: Original strand, 16653011 - 16653069
Alignment:
Q  221 aaattacgaactatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    |||||||| ||||||||| |||||||| |||||||||| ||||||||||||||||||||    
T  16653011 aaattacggactatataacatgtttttataaaataaatcaagtgtgattgaagtattat 16653069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 233 - 279
Target Start/End: Complemental strand, 31543242 - 31543196
Alignment:
Q  233 atataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||    
T  31543242 atataacatgtttttctaaaataaattaagtgtgattgaagtattat 31543196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 232 - 279
Target Start/End: Complemental strand, 7503125 - 7503078
Alignment:
Q  232 tatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    ||||||| |||||||||||||||||||||||||||||| |||||||||    
T  7503125 tatataacatgtttttctaaaataaattaagtgtgattaaagtattat 7503078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 221 - 279
Target Start/End: Original strand, 7979202 - 7979260
Alignment:
Q  221 aaattacgaactatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    |||||||| ||||||||| ||||||||||||||||||| |||||  |||||||||||||    
T  7979202 aaattacggactatataacatgtttttctaaaataaatcaagtgcaattgaagtattat 7979260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 221 - 279
Target Start/End: Original strand, 11785588 - 11785646
Alignment:
Q  221 aaattacgaactatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    |||||| ||||||||||| |||||||||||||||| ||||| || ||||||||||||||    
T  11785588 aaattatgaactatataacatgtttttctaaaatacattaattgcgattgaagtattat 11785646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 221 - 279
Target Start/End: Original strand, 37032441 - 37032499
Alignment:
Q  221 aaattacgaactatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    |||||||  ||||||||| |||||||| ||||||||||||||||||||| |||||||||    
T  37032441 aaattacagactatataacatgtttttttaaaataaattaagtgtgattaaagtattat 37032499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 221 - 279
Target Start/End: Complemental strand, 40990366 - 40990308
Alignment:
Q  221 aaattacgaactatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    |||||||| ||||||||| |||||| | ||||||||||||||| |||||||||||||||    
T  40990366 aaattacggactatataacatgtttctttaaaataaattaagtctgattgaagtattat 40990308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 234 - 279
Target Start/End: Original strand, 30664436 - 30664481
Alignment:
Q  234 tataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    ||||| ||||||||| ||||||||||||||||||||||||||||||    
T  30664436 tataacatgtttttcaaaaataaattaagtgtgattgaagtattat 30664481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 232 - 279
Target Start/End: Complemental strand, 29358510 - 29358463
Alignment:
Q  232 tatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    ||||||| || |||||||| ||||||||||||||||||||||||||||    
T  29358510 tatataacatatttttctagaataaattaagtgtgattgaagtattat 29358463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 240 - 279
Target Start/End: Complemental strand, 30479880 - 30479841
Alignment:
Q  240 atgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  30479880 atgtttttctaaaataaatcaagtgtgattgaagtattat 30479841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 279
Target Start/End: Original strand, 1281205 - 1281263
Alignment:
Q  221 aaattacgaactatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    |||||||| || |||||| |||||||||||| |||||| ||||||| ||||||||||||    
T  1281205 aaattacggacgatataacatgtttttctaagataaatcaagtgtggttgaagtattat 1281263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 279
Target Start/End: Complemental strand, 9718661 - 9718603
Alignment:
Q  221 aaattacgaactatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    |||||| ||||||||||| || ||||||||||||  ||||| |||||||||||||||||    
T  9718661 aaattatgaactatataacatatttttctaaaattcattaattgtgattgaagtattat 9718603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 233 - 279
Target Start/End: Original strand, 28083816 - 28083862
Alignment:
Q  233 atataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    |||||| |||||| |||||||||||||||||||||||| ||||||||    
T  28083816 atataacatgtttctctaaaataaattaagtgtgattggagtattat 28083862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 279
Target Start/End: Original strand, 31738485 - 31738543
Alignment:
Q  221 aaattacgaactatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    |||||||  ||||||||| |||||| |||| |||||||||||||| |||||||||||||    
T  31738485 aaattacagactatataacatgtttctctagaataaattaagtgtaattgaagtattat 31738543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 241 - 279
Target Start/End: Original strand, 34633819 - 34633857
Alignment:
Q  241 tgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  34633819 tgtttttctaaaataaatcaagtgtgattgaagtattat 34633857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 279
Target Start/End: Complemental strand, 37923260 - 37923202
Alignment:
Q  221 aaattacgaactatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    |||||||  ||||||||| ||||||||||||||||||||||||| |||| || ||||||    
T  37923260 aaattacagactatataacatgtttttctaaaataaattaagtgcgattaaaatattat 37923202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 230 - 279
Target Start/End: Complemental strand, 3727028 - 3726979
Alignment:
Q  230 actatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    ||||||||| |||||||||||||||||||||||  |||||||| ||||||    
T  3727028 actatataacatgtttttctaaaataaattaagcatgattgaaatattat 3726979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 232 - 279
Target Start/End: Original strand, 2248525 - 2248572
Alignment:
Q  232 tatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    ||||||| ||||||||||||||||||| ||||||||||| | ||||||    
T  2248525 tatataacatgtttttctaaaataaatcaagtgtgattggaatattat 2248572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 221 - 272
Target Start/End: Original strand, 11033479 - 11033530
Alignment:
Q  221 aaattacgaactatataatatgtttttctaaaataaattaagtgtgattgaa 272  Q
    |||| ||| ||||||||  ||||||||||||||||||||| |||||||||||    
T  11033479 aaataacggactatatatcatgtttttctaaaataaattatgtgtgattgaa 11033530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 236 - 279
Target Start/End: Complemental strand, 35694922 - 35694879
Alignment:
Q  236 taatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    |||||| ||||| |||||||||| ||||||||||||||||||||    
T  35694922 taatatatttttttaaaataaatcaagtgtgattgaagtattat 35694879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 221 - 279
Target Start/End: Original strand, 10028172 - 10028230
Alignment:
Q  221 aaattacgaactatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    |||||||| || |||||| || ||||| |||||||||||||||||| ||||||| ||||    
T  10028172 aaattacggaccatataacatatttttttaaaataaattaagtgtggttgaagtcttat 10028230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 221 - 279
Target Start/End: Complemental strand, 12022325 - 12022267
Alignment:
Q  221 aaattacgaactatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    |||||||| || || ||| |||||||| |||||||||||||||||  ||||||||||||    
T  12022325 aaattacggacaatgtaaaatgtttttttaaaataaattaagtgtttttgaagtattat 12022267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 230 - 279
Target Start/End: Original strand, 36308913 - 36308963
Alignment:
Q  230 actatataatatgtttttc-taaaataaattaagtgtgattgaagtattat 279  Q
    ||||||||| ||||||||  ||||||||| |||||||||||||||||||||    
T  36308913 actatataacatgttttttataaaataaactaagtgtgattgaagtattat 36308963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 279
Target Start/End: Complemental strand, 4247682 - 4247641
Alignment:
Q  238 atatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    |||||||||| ||||||||||||||| ||||| |||||||||    
T  4247682 atatgtttttttaaaataaattaagtatgatttaagtattat 4247641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 279
Target Start/End: Original strand, 27487065 - 27487110
Alignment:
Q  234 tataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    ||||| ||||||||||||||  |||||||||| |||||||||||||    
T  27487065 tataaaatgtttttctaaaaccaattaagtgttattgaagtattat 27487110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 48; Significance: 2e-18; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 228 - 279
Target Start/End: Complemental strand, 34228493 - 34228442
Alignment:
Q  228 gaactatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  34228493 gaactatataacatgtttttctaaaataaattaagtgtgattgaagtattat 34228442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 221 - 279
Target Start/End: Complemental strand, 1051680 - 1051622
Alignment:
Q  221 aaattacgaactatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||||||| |||||    
T  1051680 aaattacgaactatataacctgtttttctaaaataaattaagtgtgattgaagcattat 1051622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 221 - 279
Target Start/End: Complemental strand, 40196714 - 40196656
Alignment:
Q  221 aaattacgaactatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    |||||||| | ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  40196714 aaattacggaatatataacatgtttttctaaaataaattaagtgtgattgaagtattat 40196656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 221 - 279
Target Start/End: Complemental strand, 41497139 - 41497081
Alignment:
Q  221 aaattacgaactatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    |||||||| ||||||||| |||||||||||||||||||||||||||||||||| |||||    
T  41497139 aaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagaattat 41497081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 231 - 279
Target Start/End: Complemental strand, 33655280 - 33655232
Alignment:
Q  231 ctatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||    
T  33655280 ctatataacatgtttttctaaaataaattaagtgtgattgaagtattat 33655232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 232 - 279
Target Start/End: Complemental strand, 24970336 - 24970289
Alignment:
Q  232 tatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  24970336 tatataacatgtttttctaaaataaattaagtgtgattgaagtattat 24970289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 221 - 279
Target Start/End: Original strand, 25887254 - 25887312
Alignment:
Q  221 aaattacgaactatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    |||| ||| ||||||||| ||||||||||||||||||||||||||||||| ||||||||    
T  25887254 aaatcacggactatataacatgtttttctaaaataaattaagtgtgattggagtattat 25887312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 221 - 279
Target Start/End: Complemental strand, 39856047 - 39855989
Alignment:
Q  221 aaattacgaactatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    |||||||| ||||||||| |||||||||||||||||||||||||||| | |||||||||    
T  39856047 aaattacggactatataacatgtttttctaaaataaattaagtgtgacttaagtattat 39855989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 221 - 279
Target Start/End: Complemental strand, 40572416 - 40572358
Alignment:
Q  221 aaattacgaactatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    |||||||| |||||||||||||||| |||||||||||||||| |||||| |||||||||    
T  40572416 aaattacggactatataatatgtttctctaaaataaattaagcgtgattaaagtattat 40572358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 221 - 279
Target Start/End: Original strand, 47390917 - 47390975
Alignment:
Q  221 aaattacgaactatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    |||||| ||||||||||| |||||||||||||||| ||||| |||||||||||||||||    
T  47390917 aaattatgaactatataacatgtttttctaaaatacattaattgtgattgaagtattat 47390975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 240 - 279
Target Start/End: Complemental strand, 22163272 - 22163233
Alignment:
Q  240 atgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  22163272 atgtttttctaaaataaattaagtgtgattgaagtattat 22163233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 240 - 279
Target Start/End: Complemental strand, 22221980 - 22221941
Alignment:
Q  240 atgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  22221980 atgtttttctaaaataaattaagtgtgattgaagtattat 22221941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 221 - 279
Target Start/End: Complemental strand, 34235190 - 34235131
Alignment:
Q  221 aaattacgaactatataatatgttttt-ctaaaataaattaagtgtgattgaagtattat 279  Q
    |||||||| | ||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  34235190 aaattacggattatataacatgttttttctaaaataaattaagtgtgattgaagtattat 34235131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 221 - 279
Target Start/End: Original strand, 17852933 - 17852991
Alignment:
Q  221 aaattacgaactatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    |||||||| | || |||| |||||||||||||||||||||||||||||||| |||||||    
T  17852933 aaattacggattaaataacatgtttttctaaaataaattaagtgtgattgaggtattat 17852991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 221 - 279
Target Start/End: Original strand, 43230298 - 43230356
Alignment:
Q  221 aaattacgaactatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    |||||||| | ||||||| ||||||||||||||||||||||||| |||||||| |||||    
T  43230298 aaattacggattatataacatgtttttctaaaataaattaagtgcgattgaagaattat 43230356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 221 - 269
Target Start/End: Complemental strand, 13771128 - 13771080
Alignment:
Q  221 aaattacgaactatataatatgtttttctaaaataaattaagtgtgatt 269  Q
    |||||||| ||||||||| |||||||| |||||||||||||||||||||    
T  13771128 aaattacggactatataacatgtttttttaaaataaattaagtgtgatt 13771080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 223 - 279
Target Start/End: Original strand, 26365832 - 26365888
Alignment:
Q  223 attacgaactatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    ||||| |||||||||| || ||||||||||||||| || ||||||||||||||||||    
T  26365832 attacaaactatataacatatttttctaaaataaactaggtgtgattgaagtattat 26365888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 234 - 278
Target Start/End: Original strand, 48152055 - 48152099
Alignment:
Q  234 tataatatgtttttctaaaataaattaagtgtgattgaagtatta 278  Q
    ||||| |||||||||||||||||||| ||||||||||||||||||    
T  48152055 tataacatgtttttctaaaataaatttagtgtgattgaagtatta 48152099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 279
Target Start/End: Original strand, 33519110 - 33519168
Alignment:
Q  221 aaattacgaactatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    ||||||||||| |||||| |||||||| | |||||||||||||||  ||||||||||||    
T  33519110 aaattacgaacaatataaaatgtttttttgaaataaattaagtgtttttgaagtattat 33519168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 279
Target Start/End: Complemental strand, 37417815 - 37417757
Alignment:
Q  221 aaattacgaactatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    |||| ||| ||||||||| ||||||||| ||| ||| ||||||||||||||||||||||    
T  37417815 aaataacggactatataacatgtttttcaaaattaagttaagtgtgattgaagtattat 37417757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 274
Target Start/End: Original strand, 41008244 - 41008298
Alignment:
Q  221 aaattacgaactatataatatgtttttct-aaaataaattaagtgtgattgaagt 274  Q
    |||||||| ||||||||| |||||||| | |||||||||||||||||||||||||    
T  41008244 aaattacggactatataacatgttttttttaaaataaattaagtgtgattgaagt 41008298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 279
Target Start/End: Original strand, 42306396 - 42306454
Alignment:
Q  221 aaattacgaactatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    |||||||  ||||||||| |||| |||||||||||||||||| ||||||| ||||||||    
T  42306396 aaattaccgactatataacatgtatttctaaaataaattaagcgtgattggagtattat 42306454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 230 - 279
Target Start/End: Complemental strand, 45940829 - 45940780
Alignment:
Q  230 actatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    ||||||||| || ||||||||||||||||||| ||| |||||||||||||    
T  45940829 actatataacatatttttctaaaataaattaaatgtaattgaagtattat 45940780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 279
Target Start/End: Complemental strand, 18063721 - 18063685
Alignment:
Q  243 tttttctaaaataaattaagtgtgattgaagtattat 279  Q
    ||||| |||||||||||||||||||||||||||||||    
T  18063721 tttttttaaaataaattaagtgtgattgaagtattat 18063685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 232 - 279
Target Start/End: Complemental strand, 30891165 - 30891119
Alignment:
Q  232 tatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    |||||||||||||||| |||| |||||||| |||||||||||||||||    
T  30891165 tatataatatgtttttttaaa-taaattaaatgtgattgaagtattat 30891119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 221 - 279
Target Start/End: Original strand, 42087057 - 42087115
Alignment:
Q  221 aaattacgaactatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    |||||||||| ||||||| || || || ||||||||||||||||| |||||| ||||||    
T  42087057 aaattacgaattatataacatattattttaaaataaattaagtgtaattgaattattat 42087115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 221 - 277
Target Start/End: Complemental strand, 18795777 - 18795721
Alignment:
Q  221 aaattacgaactatataatatgtttttctaaaataaattaagtgtgattgaagtatt 277  Q
    ||||||||||| |||||| |||||||| ||||| |||| |||||| |||||| ||||    
T  18795777 aaattacgaacaatataaaatgtttttttaaaacaaatcaagtgttattgaattatt 18795721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 251 - 279
Target Start/End: Original strand, 20393693 - 20393721
Alignment:
Q  251 aaataaattaagtgtgattgaagtattat 279  Q
    |||||||||||||||||||||||||||||    
T  20393693 aaataaattaagtgtgattgaagtattat 20393721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 243 - 279
Target Start/End: Complemental strand, 23116420 - 23116384
Alignment:
Q  243 tttttctaaaataaattaagtgtgattgaagtattat 279  Q
    ||||| ||||| |||||||||||||||||||||||||    
T  23116420 tttttttaaaaaaaattaagtgtgattgaagtattat 23116384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 221 - 265
Target Start/End: Original strand, 48013564 - 48013608
Alignment:
Q  221 aaattacgaactatataatatgtttttctaaaataaattaagtgt 265  Q
    ||||||||||| || ||| |||||||| |||||||||||||||||    
T  48013564 aaattacgaacaatgtaaaatgtttttttaaaataaattaagtgt 48013608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 47; Significance: 7e-18; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 221 - 279
Target Start/End: Original strand, 7544198 - 7544256
Alignment:
Q  221 aaattacgaactatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    |||||||| ||||||||| ||||||||||||||||||| ||||||||||||||||||||    
T  7544198 aaattacggactatataacatgtttttctaaaataaatcaagtgtgattgaagtattat 7544256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 221 - 279
Target Start/End: Complemental strand, 8503017 - 8502959
Alignment:
Q  221 aaattacgaactatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    |||||||| ||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  8503017 aaattacggactatataacatgcttttctaaaataaattaagtgtgattgaagtattat 8502959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 221 - 279
Target Start/End: Original strand, 11756939 - 11756997
Alignment:
Q  221 aaattacgaactatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||||| |||||||||    
T  11756939 aaattacgaactatataacatgtttctctaaaataaattaagtgtgattaaagtattat 11756997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 221 - 279
Target Start/End: Original strand, 9856942 - 9857000
Alignment:
Q  221 aaattacgaactatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    |||||| | ||||||||| ||||||||||||||||||| ||||||||||||||||||||    
T  9856942 aaattaaggactatataacatgtttttctaaaataaatcaagtgtgattgaagtattat 9857000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 221 - 279
Target Start/End: Original strand, 26414955 - 26415013
Alignment:
Q  221 aaattacgaactatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    |||||||| ||||||| | |||||||||||||||| |||||||||||||||||||||||    
T  26414955 aaattacggactatatgacatgtttttctaaaatatattaagtgtgattgaagtattat 26415013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 240 - 279
Target Start/End: Original strand, 10476109 - 10476148
Alignment:
Q  240 atgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  10476109 atgtttttctaaaataaattaagtgtgattgaagtattat 10476148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 224 - 279
Target Start/End: Original strand, 16938544 - 16938599
Alignment:
Q  224 ttacgaactatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    ||||| ||||||||| |||||| |||||||||||||||||||||||||| ||||||    
T  16938544 ttacggactatataacatgtttctctaaaataaattaagtgtgattgaaatattat 16938599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 221 - 272
Target Start/End: Original strand, 22022912 - 22022963
Alignment:
Q  221 aaattacgaactatataatatgtttttctaaaataaattaagtgtgattgaa 272  Q
    |||||||| ||||||||| || ||||||||||||||||||||||||||||||    
T  22022912 aaattacggactatataacatatttttctaaaataaattaagtgtgattgaa 22022963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 221 - 279
Target Start/End: Original strand, 13634773 - 13634831
Alignment:
Q  221 aaattacgaactatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    |||| ||| ||||||||| ||||||||||||||||||||| ||||||||||| ||||||    
T  13634773 aaataacggactatataacatgtttttctaaaataaattatgtgtgattgaattattat 13634831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 221 - 279
Target Start/End: Complemental strand, 36392331 - 36392274
Alignment:
Q  221 aaattacgaactatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    |||||||| |||||||||||| |||| |||||||| |||||||||||||||||||||||    
T  36392331 aaattacggactatataatatatttt-ctaaaatagattaagtgtgattgaagtattat 36392274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 230 - 279
Target Start/End: Complemental strand, 2550525 - 2550476
Alignment:
Q  230 actatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    ||||||||| ||||||||||| ||||||||| ||||||||||||||||||    
T  2550525 actatataacatgtttttctataataaattacgtgtgattgaagtattat 2550476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 234 - 279
Target Start/End: Complemental strand, 10072816 - 10072771
Alignment:
Q  234 tataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    ||||| |||||||||||||||||||||||| |||||||||||||||    
T  10072816 tataacatgtttttctaaaataaattaagtatgattgaagtattat 10072771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 222 - 279
Target Start/End: Original strand, 42681516 - 42681573
Alignment:
Q  222 aattacgaactatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    ||||||| ||||||||| ||||||||||||||||| || ||||||||| |||||||||    
T  42681516 aattacggactatataacatgtttttctaaaataattttagtgtgattaaagtattat 42681573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 240 - 276
Target Start/End: Original strand, 10650510 - 10650546
Alignment:
Q  240 atgtttttctaaaataaattaagtgtgattgaagtat 276  Q
    |||||||||||||||||||||||||||||||||||||    
T  10650510 atgtttttctaaaataaattaagtgtgattgaagtat 10650546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 232 - 279
Target Start/End: Complemental strand, 9798783 - 9798736
Alignment:
Q  232 tatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    ||||||| |||||||||| ||||||||||| |||||||||||||||||    
T  9798783 tatataacatgtttttcttaaataaattaattgtgattgaagtattat 9798736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 279
Target Start/End: Complemental strand, 4373748 - 4373690
Alignment:
Q  221 aaattacgaactatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    |||||||| ||||||||| | ||||||  ||||||||||||||||||||||| ||||||    
T  4373748 aaattacggactatataacaagttttttaaaaataaattaagtgtgattgaaatattat 4373690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 241 - 279
Target Start/End: Complemental strand, 20513611 - 20513573
Alignment:
Q  241 tgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    ||||||| |||||||||||||||||||||||||||||||    
T  20513611 tgtttttataaaataaattaagtgtgattgaagtattat 20513573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 225 - 279
Target Start/End: Original strand, 36363098 - 36363152
Alignment:
Q  225 tacgaactatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    |||| ||||||||| ||||||||||||||||||| |||||| |||||||| ||||    
T  36363098 tacgtactatataacatgtttttctaaaataaatcaagtgtcattgaagttttat 36363152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 234 - 279
Target Start/End: Complemental strand, 17024393 - 17024348
Alignment:
Q  234 tataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    ||||| ||||||||||||||||||||||||  ||||||||||||||    
T  17024393 tataacatgtttttctaaaataaattaagtacgattgaagtattat 17024348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 279
Target Start/End: Complemental strand, 28279636 - 28279600
Alignment:
Q  243 tttttctaaaataaattaagtgtgattgaagtattat 279  Q
    ||||||||||||||| |||||||||||||||||||||    
T  28279636 tttttctaaaataaactaagtgtgattgaagtattat 28279600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 221 - 279
Target Start/End: Original strand, 5688475 - 5688533
Alignment:
Q  221 aaattacgaactatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    ||||||||||| || ||| |||||||| ||||||| |||||||||  ||||||||||||    
T  5688475 aaattacgaacaatgtaaaatgtttttttaaaatagattaagtgtttttgaagtattat 5688533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 221 - 279
Target Start/End: Original strand, 37606957 - 37607014
Alignment:
Q  221 aaattacgaactatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    |||||| | ||||||||| |||||||| ||||||||||||  |||||||||||||||||    
T  37606957 aaattaaggactatataa-atgtttttttaaaataaattatatgtgattgaagtattat 37607014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 273
Target Start/End: Original strand, 14681542 - 14681583
Alignment:
Q  232 tatataatatgtttttctaaaataaattaagtgtgattgaag 273  Q
    ||||||| |||||||| ||||||||||||| |||||||||||    
T  14681542 tatataacatgtttttttaaaataaattaaatgtgattgaag 14681583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 47; Significance: 7e-18; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 221 - 279
Target Start/End: Complemental strand, 2859114 - 2859056
Alignment:
Q  221 aaattacgaactatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    |||||||| ||||||||| ||||||||| ||||||||||||||||||||||||||||||    
T  2859114 aaattacggactatataacatgtttttcaaaaataaattaagtgtgattgaagtattat 2859056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 221 - 279
Target Start/End: Original strand, 30010394 - 30010452
Alignment:
Q  221 aaattacgaactatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||| ||||||||||||    
T  30010394 aaattacggactatataacatgtttttctaaaataaattaagtgtggttgaagtattat 30010452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 221 - 279
Target Start/End: Complemental strand, 32951500 - 32951442
Alignment:
Q  221 aaattacgaactatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    |||||||| |||||| || ||||||||||||||||||||||||||||||||||||||||    
T  32951500 aaattacggactatagaacatgtttttctaaaataaattaagtgtgattgaagtattat 32951442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 221 - 279
Target Start/End: Original strand, 8529861 - 8529919
Alignment:
Q  221 aaattacgaactatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    ||||||| |||||||||| |||||||| | |||||||||||||||||||||||||||||    
T  8529861 aaattacaaactatataacatgttttttttaaataaattaagtgtgattgaagtattat 8529919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 225 - 279
Target Start/End: Complemental strand, 38510072 - 38510018
Alignment:
Q  225 tacgaactatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    |||| ||||||||| ||||||||||||||||||| ||||||||||||||||||||    
T  38510072 tacggactatataacatgtttttctaaaataaatcaagtgtgattgaagtattat 38510018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 221 - 279
Target Start/End: Complemental strand, 50744463 - 50744405
Alignment:
Q  221 aaattacgaactatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    |||||||| ||||||||| | |||| |||||||||||||||||||||||||||||||||    
T  50744463 aaattacggactatataacaggtttctctaaaataaattaagtgtgattgaagtattat 50744405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 221 - 279
Target Start/End: Original strand, 51597730 - 51597788
Alignment:
Q  221 aaattacgaactatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    |||| ||| ||||||||| |||||||| |||||||||||||||||||||||||||||||    
T  51597730 aaatcacggactatataacatgtttttttaaaataaattaagtgtgattgaagtattat 51597788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 231 - 279
Target Start/End: Complemental strand, 44211077 - 44211029
Alignment:
Q  231 ctatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    ||||||||  |||||||||||||||||||||||||||||||||||||||    
T  44211077 ctatataacgtgtttttctaaaataaattaagtgtgattgaagtattat 44211029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 221 - 276
Target Start/End: Original strand, 12234072 - 12234127
Alignment:
Q  221 aaattacgaactatataatatgtttttctaaaataaattaagtgtgattgaagtat 276  Q
    |||||||| ||||||||| ||||||||||||||||||| |||||||||||| ||||    
T  12234072 aaattacggactatataacatgtttttctaaaataaatcaagtgtgattgatgtat 12234127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 221 - 279
Target Start/End: Complemental strand, 40095116 - 40095057
Alignment:
Q  221 aaattacgaactatataatatgttttt-ctaaaataaattaagtgtgattgaagtattat 279  Q
    |||||||  ||||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  40095116 aaattacagactatataacatgttttttctaaaataaattaagtgtgattgaagtattat 40095057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 221 - 279
Target Start/End: Original strand, 10391934 - 10391992
Alignment:
Q  221 aaattacgaactatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    |||||||| ||||||| | |||||||||||||||||||||| ||||||| |||||||||    
T  10391934 aaattacggactatattacatgtttttctaaaataaattaattgtgattaaagtattat 10391992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 221 - 275
Target Start/End: Complemental strand, 45585867 - 45585813
Alignment:
Q  221 aaattacgaactatataatatgtttttctaaaataaattaagtgtgattgaagta 275  Q
    |||||||| ||||||||| |||||||| |||||||||||||||||||| ||||||    
T  45585867 aaattacggactatataacatgtttttttaaaataaattaagtgtgatcgaagta 45585813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 234 - 279
Target Start/End: Complemental strand, 26941012 - 26940967
Alignment:
Q  234 tataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||||    
T  26941012 tataacatgtttttctaaaataaatcaagtgtgattgaagtattat 26940967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 230 - 279
Target Start/End: Complemental strand, 49946761 - 49946712
Alignment:
Q  230 actatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    ||||||||| |||||||| ||||||||||||| |||||||||||||||||    
T  49946761 actatataacatgtttttttaaaataaattaaatgtgattgaagtattat 49946712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 279
Target Start/End: Complemental strand, 1085672 - 1085614
Alignment:
Q  221 aaattacgaactatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    ||||||||||| || ||| |||||||| |||||||||||||||||  ||||||||||||    
T  1085672 aaattacgaaccatgtaaaatgtttttttaaaataaattaagtgtttttgaagtattat 1085614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 279
Target Start/End: Complemental strand, 35349644 - 35349586
Alignment:
Q  221 aaattacgaactatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    |||||||| ||||||||| || ||||||||||||||| |||| || |||||||||||||    
T  35349644 aaattacggactatataacatttttttctaaaataaactaagggttattgaagtattat 35349586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 279
Target Start/End: Original strand, 41676363 - 41676399
Alignment:
Q  243 tttttctaaaataaattaagtgtgattgaagtattat 279  Q
    |||||||||||||||||||||||||||| ||||||||    
T  41676363 tttttctaaaataaattaagtgtgattgtagtattat 41676399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 240 - 279
Target Start/End: Original strand, 42230619 - 42230658
Alignment:
Q  240 atgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    ||||||||  ||||||||||||||||||||||||||||||    
T  42230619 atgttttttaaaaataaattaagtgtgattgaagtattat 42230658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 221 - 279
Target Start/End: Original strand, 2506601 - 2506659
Alignment:
Q  221 aaattacgaactatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    ||||||||| | |||||| ||||||||  ||||||||||||||||  ||||||||||||    
T  2506601 aaattacgaccaatataaaatgttttttcaaaataaattaagtgtttttgaagtattat 2506659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 221 - 279
Target Start/End: Original strand, 33643330 - 33643388
Alignment:
Q  221 aaattacgaactatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    ||||||||||  || ||| |||||||| |||||||||||||||||  ||||||||||||    
T  33643330 aaattacgaaaaatgtaaaatgtttttttaaaataaattaagtgtttttgaagtattat 33643388  T

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Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 221 - 279
Target Start/End: Original strand, 41498466 - 41498524
Alignment:
Q  221 aaattacgaactatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    |||||| ||||||| ||| ||| |||||||  |||| ||||||||||||||||||||||    
T  41498466 aaattatgaactatttaacatgattttctacgataagttaagtgtgattgaagtattat 41498524  T

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Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 225 - 279
Target Start/End: Complemental strand, 50079562 - 50079508
Alignment:
Q  225 tacgaactatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    ||||||| |||||| |||||||| |||||||||||||||||  || |||||||||    
T  50079562 tacgaacaatataaaatgtttttttaaaataaattaagtgtttttaaagtattat 50079508  T

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Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 279
Target Start/End: Original strand, 6563648 - 6563697
Alignment:
Q  230 actatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    ||||||||| |||| |||||||||||||||| |||| |||||| ||||||    
T  6563648 actatataacatgtctttctaaaataaattatgtgtcattgaattattat 6563697  T

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Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 275
Target Start/End: Complemental strand, 42742478 - 42742438
Alignment:
Q  234 tataatatgtttttctaaaataaattaagtgtgattgaagta 275  Q
    ||||| |||||||| |||||||||||||||||||||||||||    
T  42742478 tataaaatgttttt-taaaataaattaagtgtgattgaagta 42742438  T

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Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 273
Target Start/End: Complemental strand, 2470909 - 2470865
Alignment:
Q  229 aactatataatatgtttttctaaaataaattaagtgtgattgaag 273  Q
    |||||||||| |||||||||||||||| | ||| |||||||||||    
T  2470909 aactatataacatgtttttctaaaatacactaattgtgattgaag 2470865  T

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Target: chr6 (Bit Score: 46; Significance: 3e-17; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 230 - 275
Target Start/End: Complemental strand, 12811153 - 12811108
Alignment:
Q  230 actatataatatgtttttctaaaataaattaagtgtgattgaagta 275  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  12811153 actatataatatgtttttctaaaataaattaagtgtgattgaagta 12811108  T

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Target: chr6; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 221 - 277
Target Start/End: Complemental strand, 5585484 - 5585428
Alignment:
Q  221 aaattacgaactatataatatgtttttctaaaataaattaagtgtgattgaagtatt 277  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  5585484 aaattacggactatataacatgtttttctaaaataaattaagtgtgattgaaatatt 5585428  T

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Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 221 - 279
Target Start/End: Complemental strand, 21607026 - 21606968
Alignment:
Q  221 aaattacgaactatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    ||||||| |||||||| ||||||||||||||||||||| |||||||| |||||||||||    
T  21607026 aaattacaaactatattatatgtttttctaaaataaataaagtgtgactgaagtattat 21606968  T

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Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 230 - 279
Target Start/End: Original strand, 2893701 - 2893750
Alignment:
Q  230 actatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    ||||||||| |||||||||||||||||||||||||||||||| |||||||    
T  2893701 actatataacatgtttttctaaaataaattaagtgtgattgatgtattat 2893750  T

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Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 232 - 279
Target Start/End: Original strand, 13583792 - 13583839
Alignment:
Q  232 tatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    ||||||| ||||||||||||||||||||||||||||||||| ||||||    
T  13583792 tatataacatgtttttctaaaataaattaagtgtgattgaaatattat 13583839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 221 - 276
Target Start/End: Complemental strand, 19278220 - 19278165
Alignment:
Q  221 aaattacgaactatataatatgtttttctaaaataaattaagtgtgattgaagtat 276  Q
    |||||||| ||||||||| |||||||||||||||||||| ||| ||||||||||||    
T  19278220 aaattacggactatataacatgtttttctaaaataaatttagtctgattgaagtat 19278165  T

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Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 225 - 279
Target Start/End: Complemental strand, 30487483 - 30487429
Alignment:
Q  225 tacgaactatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    |||| ||||||||| |||||||| |||||||||| ||||||||||||||||||||    
T  30487483 tacggactatataacatgtttttataaaataaatcaagtgtgattgaagtattat 30487429  T

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Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 221 - 279
Target Start/End: Original strand, 33236013 - 33236071
Alignment:
Q  221 aaattacgaactatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    |||||||| ||||||||| |||||||||||||||||||||||  ||||||||| |||||    
T  33236013 aaattacggactatataacatgtttttctaaaataaattaagactgattgaagaattat 33236071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 221 - 279
Target Start/End: Original strand, 34176397 - 34176455
Alignment:
Q  221 aaattacgaactatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    |||||||| | ||||||| ||||||||||||||||||| ||||||||||| ||||||||    
T  34176397 aaattacggattatataacatgtttttctaaaataaatcaagtgtgattgcagtattat 34176455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 230 - 279
Target Start/End: Original strand, 31849181 - 31849230
Alignment:
Q  230 actatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    ||||||||| || |||||||||||||||| ||||||||||||||||||||    
T  31849181 actatataacatatttttctaaaataaatcaagtgtgattgaagtattat 31849230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 230 - 279
Target Start/End: Original strand, 33041541 - 33041590
Alignment:
Q  230 actatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    |||||||||| ||||||| |||||||||||||||||||||||||| ||||    
T  33041541 actatataatgtgtttttttaaaataaattaagtgtgattgaagtgttat 33041590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 234 - 274
Target Start/End: Complemental strand, 6034241 - 6034201
Alignment:
Q  234 tataatatgtttttctaaaataaattaagtgtgattgaagt 274  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  6034241 tataacatgtttttctaaaataaattaagtgtgattgaagt 6034201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 225 - 279
Target Start/End: Complemental strand, 2892781 - 2892727
Alignment:
Q  225 tacgaactatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    |||| ||||||||| | |||||||||||||||||| |||||||||||| ||||||    
T  2892781 tacggactatataacacgtttttctaaaataaatttagtgtgattgaaatattat 2892727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 279
Target Start/End: Original strand, 26318367 - 26318425
Alignment:
Q  221 aaattacgaactatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    ||||||||||  |||||| |||||||| |||||||||||||||||  ||||||||||||    
T  26318367 aaattacgaaaaatataaaatgtttttttaaaataaattaagtgtttttgaagtattat 26318425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 279
Target Start/End: Complemental strand, 4097672 - 4097636
Alignment:
Q  243 tttttctaaaataaattaagtgtgattgaagtattat 279  Q
    |||||| ||||||||||||||||||||||||||||||    
T  4097672 tttttccaaaataaattaagtgtgattgaagtattat 4097636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 221 - 279
Target Start/End: Original strand, 1390381 - 1390440
Alignment:
Q  221 aaattacgaactatataatatgttt-ttctaaaataaattaagtgtgattgaagtattat 279  Q
    |||||||| ||||| ||| |||||| |||||||||||||||||| |||||||| ||||||    
T  1390381 aaattacggactatgtaacatgtttattctaaaataaattaagtttgattgaaatattat 1390440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 240 - 279
Target Start/End: Original strand, 14515552 - 14515591
Alignment:
Q  240 atgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    |||||| ||||||||||||||||||||| |||||||||||    
T  14515552 atgtttctctaaaataaattaagtgtgaatgaagtattat 14515591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 232 - 279
Target Start/End: Complemental strand, 16738167 - 16738120
Alignment:
Q  232 tatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    ||||||| |||||||||||||||||| ||||||| ||| |||||||||    
T  16738167 tatataaaatgtttttctaaaataaagtaagtgttatttaagtattat 16738120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 221 - 279
Target Start/End: Complemental strand, 30850094 - 30850036
Alignment:
Q  221 aaattacgaactatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    |||||| ||| |||||||||||||||| ||||| ||||| ||| | |||||||||||||    
T  30850094 aaattatgaattatataatatgtttttttaaaacaaatttagtataattgaagtattat 30850036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 279
Target Start/End: Original strand, 25741478 - 25741527
Alignment:
Q  230 actatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    ||||||||| |||||||| |||||||||||||| |||| |||||| ||||    
T  25741478 actatataacatgtttttttaaaataaattaagcgtgactgaagttttat 25741527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 243 - 279
Target Start/End: Complemental strand, 5381343 - 5381307
Alignment:
Q  243 tttttctaaaataaattaagtgtgattgaagtattat 279  Q
    ||||| |||||||||||||| ||||||||||||||||    
T  5381343 tttttttaaaataaattaagcgtgattgaagtattat 5381307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 251 - 279
Target Start/End: Original strand, 32926737 - 32926765
Alignment:
Q  251 aaataaattaagtgtgattgaagtattat 279  Q
    |||||||||||||||||||||||||||||    
T  32926737 aaataaattaagtgtgattgaagtattat 32926765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0262 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 230 - 279
Target Start/End: Complemental strand, 16469 - 16420
Alignment:
Q  230 actatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    ||||||||| |||||| |||||||||||||||||||||||||||||||||    
T  16469 actatataacatgtttgtctaaaataaattaagtgtgattgaagtattat 16420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 221 - 273
Target Start/End: Complemental strand, 39372 - 39320
Alignment:
Q  221 aaattacgaactatataatatgtttttctaaaataaattaagtgtgattgaag 273  Q
    |||||||| ||||| ||| ||||||||||||||||||||||||||||||||||    
T  39372 aaattacggactatgtaacatgtttttctaaaataaattaagtgtgattgaag 39320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 235 - 279
Target Start/End: Original strand, 15339 - 15383
Alignment:
Q  235 ataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||    
T  15339 ataacatgtttttctaaaataaattaagtgtggttgaagtattat 15383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 279
Target Start/End: Original strand, 6646 - 6704
Alignment:
Q  221 aaattacgaactatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    |||||||  |||||||||  |||| |||||||||||||| |||||||||||||||||||    
T  6646 aaattacagactatataacttgttattctaaaataaatttagtgtgattgaagtattat 6704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 277
Target Start/End: Original strand, 16012 - 16068
Alignment:
Q  221 aaattacgaactatataatatgtttttctaaaataaattaagtgtgattgaagtatt 277  Q
    |||||||  ||||||||| |||||||| ||||| |||||| ||||||||||||||||    
T  16012 aaattacagactatataacatgtttttttaaaaaaaattatgtgtgattgaagtatt 16068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0341 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0341
Description:

Target: scaffold0341; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 279
Target Start/End: Original strand, 18841 - 18890
Alignment:
Q  230 actatataatatgtttttctaaaataaattaagtgtgattgaagtattat 279  Q
    ||||||||| |||| |||||||||||||||| |||| |||||| ||||||    
T  18841 actatataacatgtctttctaaaataaattatgtgtcattgaattattat 18890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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