View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8427_high_19 (Length: 262)

Name: NF8427_high_19
Description: NF8427
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8427_high_19
NF8427_high_19
[»] chr3 (56 HSPs)
chr3 (88-248)||(44000187-44000346)
chr3 (93-261)||(2135000-2135168)
chr3 (93-262)||(28675720-28675889)
chr3 (125-262)||(39052824-39052960)
chr3 (125-262)||(24571244-24571380)
chr3 (125-262)||(29584838-29584974)
chr3 (125-262)||(44116902-44117038)
chr3 (1-87)||(43999897-43999983)
chr3 (125-262)||(1344693-1344829)
chr3 (125-262)||(3864661-3864796)
chr3 (125-262)||(12349157-12349293)
chr3 (179-262)||(20609634-20609717)
chr3 (125-262)||(21221346-21221482)
chr3 (125-262)||(25860407-25860543)
chr3 (125-262)||(34026630-34026766)
chr3 (133-262)||(47958418-47958546)
chr3 (118-262)||(51925194-51925337)
chr3 (91-262)||(40094431-40094602)
chr3 (180-261)||(42636390-42636471)
chr3 (125-262)||(38213317-38213453)
chr3 (133-262)||(49748897-49749025)
chr3 (179-262)||(21373946-21374029)
chr3 (114-262)||(29646017-29646165)
chr3 (125-262)||(51296544-51296680)
chr3 (125-262)||(53557781-53557917)
chr3 (125-262)||(54622782-54622918)
chr3 (180-262)||(51259766-51259848)
chr3 (93-262)||(4851444-4851611)
chr3 (108-262)||(31883008-31883161)
chr3 (180-262)||(25927313-25927395)
chr3 (118-262)||(33364764-33364907)
chr3 (109-262)||(20254991-20255143)
chr3 (93-262)||(26282373-26282542)
chr3 (179-262)||(3964304-3964387)
chr3 (179-262)||(50678814-50678897)
chr3 (179-262)||(19906778-19906861)
chr3 (179-262)||(3867635-3867718)
chr3 (125-239)||(3695301-3695414)
chr3 (108-249)||(28624919-28625058)
chr3 (179-262)||(50386442-50386525)
chr3 (125-248)||(5442254-5442376)
chr3 (179-249)||(19190717-19190786)
chr3 (179-249)||(22484742-22484812)
chr3 (198-262)||(25954485-25954549)
chr3 (125-262)||(34351354-34351490)
chr3 (179-262)||(24721501-24721584)
chr3 (180-262)||(39215455-39215537)
chr3 (45-87)||(44000193-44000235)
chr3 (179-245)||(44267758-44267824)
chr3 (118-262)||(45690892-45691029)
chr3 (180-262)||(52300454-52300535)
chr3 (94-130)||(43999941-43999977)
chr3 (180-262)||(8648543-8648625)
chr3 (114-166)||(10747169-10747221)
chr3 (195-247)||(42547371-42547423)
chr3 (125-165)||(53046723-53046763)
[»] chr7 (61 HSPs)
chr7 (88-262)||(29661251-29661425)
chr7 (93-262)||(11321878-11322047)
chr7 (124-262)||(21784836-21784973)
chr7 (93-262)||(46633630-46633799)
chr7 (125-262)||(47953156-47953292)
chr7 (99-259)||(34117392-34117551)
chr7 (125-262)||(41211193-41211330)
chr7 (125-262)||(3922696-3922832)
chr7 (125-262)||(10932550-10932686)
chr7 (125-262)||(36769562-36769698)
chr7 (125-262)||(40753121-40753257)
chr7 (91-258)||(18386456-18386623)
chr7 (93-262)||(32873762-32873931)
chr7 (93-262)||(43158679-43158848)
chr7 (125-262)||(26371802-26371938)
chr7 (125-262)||(26994218-26994354)
chr7 (125-261)||(44748661-44748796)
chr7 (93-262)||(30849239-30849408)
chr7 (188-262)||(1870163-1870237)
chr7 (114-262)||(34295397-34295544)
chr7 (125-262)||(18470650-18470786)
chr7 (125-262)||(43189235-43189372)
chr7 (109-262)||(47316691-47316844)
chr7 (118-259)||(26652825-26652965)
chr7 (98-262)||(329409-329572)
chr7 (118-261)||(23349285-23349427)
chr7 (179-262)||(41665568-41665651)
chr7 (108-262)||(1363586-1363738)
chr7 (125-262)||(3892019-3892155)
chr7 (179-262)||(34519527-34519610)
chr7 (179-258)||(46408908-46408987)
chr7 (179-249)||(22724537-22724607)
chr7 (180-262)||(30599001-30599083)
chr7 (114-262)||(48699353-48699500)
chr7 (201-262)||(48894758-48894819)
chr7 (118-247)||(9913484-9913612)
chr7 (118-247)||(9927172-9927300)
chr7 (198-262)||(16963176-16963240)
chr7 (179-262)||(43368220-43368303)
chr7 (208-262)||(11250665-11250719)
chr7 (179-249)||(26910416-26910486)
chr7 (188-262)||(38301371-38301444)
chr7 (205-262)||(11822268-11822325)
chr7 (201-262)||(20127330-20127391)
chr7 (108-262)||(29372772-29372925)
chr7 (194-262)||(17237110-17237178)
chr7 (194-262)||(37967008-37967076)
chr7 (179-251)||(43213929-43214001)
chr7 (194-259)||(46448640-46448705)
chr7 (125-224)||(47947726-47947824)
chr7 (179-262)||(21133391-21133474)
chr7 (98-246)||(21408635-21408776)
chr7 (181-262)||(22631759-22631840)
chr7 (135-221)||(29992729-29992813)
chr7 (179-246)||(22724041-22724108)
chr7 (179-249)||(2048970-2049040)
chr7 (188-238)||(42332087-42332137)
chr7 (98-262)||(48445460-48445623)
chr7 (105-163)||(29455937-29455995)
chr7 (179-249)||(46627189-46627259)
chr7 (179-243)||(35645466-35645530)
[»] chr8 (54 HSPs)
chr8 (98-262)||(29672330-29672494)
chr8 (125-262)||(29563233-29563369)
chr8 (125-262)||(41709739-41709875)
chr8 (93-262)||(8673062-8673231)
chr8 (125-262)||(6386538-6386674)
chr8 (91-262)||(12753332-12753503)
chr8 (125-262)||(32303592-32303728)
chr8 (179-262)||(37664290-37664373)
chr8 (93-262)||(30543029-30543198)
chr8 (125-262)||(4052444-4052578)
chr8 (93-262)||(31513590-31513759)
chr8 (125-259)||(45446417-45446550)
chr8 (93-261)||(13406943-13407111)
chr8 (179-262)||(21272699-21272782)
chr8 (125-262)||(32020008-32020144)
chr8 (125-262)||(34063090-34063226)
chr8 (125-261)||(3251664-3251799)
chr8 (125-262)||(27103921-27104057)
chr8 (125-262)||(31732026-31732162)
chr8 (180-262)||(14005051-14005133)
chr8 (179-261)||(15001481-15001563)
chr8 (180-262)||(30501161-30501243)
chr8 (126-262)||(37618399-37618534)
chr8 (120-247)||(16595171-16595297)
chr8 (125-262)||(5968871-5969007)
chr8 (180-262)||(7394821-7394903)
chr8 (125-261)||(34101470-34101605)
chr8 (125-259)||(25478205-25478338)
chr8 (114-259)||(39642834-39642978)
chr8 (179-262)||(37861874-37861957)
chr8 (118-262)||(10467019-10467162)
chr8 (98-262)||(35225597-35225760)
chr8 (98-262)||(40388975-40389138)
chr8 (118-262)||(41548573-41548716)
chr8 (179-262)||(45114070-45114153)
chr8 (118-262)||(7591454-7591597)
chr8 (180-262)||(17805707-17805789)
chr8 (179-262)||(29611062-29611145)
chr8 (179-249)||(16485829-16485899)
chr8 (198-260)||(17520629-17520690)
chr8 (119-262)||(22999213-22999356)
chr8 (179-247)||(10932751-10932819)
chr8 (183-262)||(54189-54268)
chr8 (180-246)||(6460277-6460344)
chr8 (179-262)||(22756418-22756501)
chr8 (179-248)||(3800964-3801033)
chr8 (180-251)||(27109559-27109630)
chr8 (188-262)||(10656693-10656767)
chr8 (121-223)||(5859518-5859619)
chr8 (188-242)||(10320304-10320358)
chr8 (199-233)||(14958993-14959027)
chr8 (101-164)||(18297469-18297534)
chr8 (39-87)||(35225587-35225635)
chr8 (226-262)||(37474762-37474798)
[»] chr5 (42 HSPs)
chr5 (125-262)||(39788154-39788291)
chr5 (98-262)||(4818138-4818302)
chr5 (125-262)||(5571642-5571776)
chr5 (179-262)||(7523187-7523270)
chr5 (125-262)||(32528677-32528813)
chr5 (125-262)||(2351642-2351778)
chr5 (125-262)||(28090518-28090654)
chr5 (125-262)||(39918469-39918605)
chr5 (179-262)||(21739159-21739242)
chr5 (125-262)||(31770589-31770725)
chr5 (179-262)||(34794902-34794985)
chr5 (93-262)||(41790460-41790629)
chr5 (125-258)||(7208232-7208364)
chr5 (108-262)||(31644391-31644544)
chr5 (93-262)||(31880074-31880243)
chr5 (118-262)||(3735312-3735455)
chr5 (179-262)||(11963356-11963439)
chr5 (125-262)||(24181622-24181758)
chr5 (125-262)||(35701239-35701375)
chr5 (180-262)||(553413-553495)
chr5 (180-262)||(4689696-4689778)
chr5 (180-262)||(8136853-8136935)
chr5 (180-262)||(24036246-24036328)
chr5 (93-256)||(40182393-40182556)
chr5 (108-262)||(8560980-8561132)
chr5 (125-262)||(6284296-6284433)
chr5 (125-262)||(40489299-40489435)
chr5 (179-262)||(22493417-22493500)
chr5 (180-262)||(7770277-7770359)
chr5 (180-261)||(700600-700681)
chr5 (125-260)||(29241340-29241474)
chr5 (132-259)||(41459558-41459684)
chr5 (203-260)||(5673178-5673235)
chr5 (179-262)||(32092980-32093062)
chr5 (93-262)||(23091302-23091471)
chr5 (118-262)||(7725807-7725950)
chr5 (179-262)||(22432307-22432390)
chr5 (180-262)||(18470426-18470508)
chr5 (140-262)||(17031134-17031255)
chr5 (179-249)||(27839084-27839154)
chr5 (98-171)||(32313773-32313846)
chr5 (188-262)||(5598504-5598578)
[»] chr4 (82 HSPs)
chr4 (93-262)||(33552827-33552996)
chr4 (132-262)||(24002310-24002440)
chr4 (93-262)||(20802516-20802685)
chr4 (88-262)||(55065318-55065491)
chr4 (125-262)||(23521845-23521981)
chr4 (125-262)||(43641064-43641200)
chr4 (118-262)||(44324327-44324470)
chr4 (93-261)||(56154553-56154721)
chr4 (92-262)||(24210249-24210420)
chr4 (93-262)||(33177017-33177186)
chr4 (93-262)||(21579958-21580127)
chr4 (133-262)||(2725118-2725245)
chr4 (125-262)||(9512325-9512461)
chr4 (179-262)||(38812538-38812621)
chr4 (98-249)||(7001792-7001940)
chr4 (125-261)||(29785523-29785658)
chr4 (126-262)||(36497183-36497318)
chr4 (125-262)||(42869938-42870072)
chr4 (93-262)||(55593817-55593986)
chr4 (125-262)||(49152085-49152220)
chr4 (125-262)||(50727898-50728034)
chr4 (125-262)||(50735912-50736048)
chr4 (125-262)||(21202705-21202840)
chr4 (179-262)||(32181281-32181364)
chr4 (114-262)||(37695526-37695673)
chr4 (88-262)||(36743673-36743847)
chr4 (179-259)||(50186546-50186626)
chr4 (179-262)||(12600904-12600987)
chr4 (108-259)||(16320469-16320617)
chr4 (179-262)||(20694389-20694472)
chr4 (179-262)||(37865771-37865854)
chr4 (188-262)||(1231338-1231412)
chr4 (180-262)||(2629936-2630018)
chr4 (118-262)||(52949679-52949821)
chr4 (125-262)||(23327882-23328020)
chr4 (189-258)||(52319351-52319420)
chr4 (125-259)||(4325756-4325889)
chr4 (198-262)||(6776615-6776679)
chr4 (125-262)||(36885896-36886033)
chr4 (133-259)||(47642479-47642604)
chr4 (133-262)||(54542963-54543090)
chr4 (179-262)||(38486242-38486325)
chr4 (180-262)||(3649655-3649737)
chr4 (114-261)||(37931874-37932020)
chr4 (194-262)||(2786997-2787065)
chr4 (179-251)||(28115270-28115342)
chr4 (179-262)||(20518007-20518090)
chr4 (125-262)||(34929880-34930016)
chr4 (179-262)||(41711865-41711948)
chr4 (179-262)||(44649149-44649232)
chr4 (187-262)||(46680495-46680570)
chr4 (118-262)||(50178477-50178621)
chr4 (205-262)||(42772832-42772889)
chr4 (98-259)||(7554945-7555105)
chr4 (179-262)||(50729527-50729610)
chr4 (118-262)||(9807114-9807256)
chr4 (93-262)||(29616102-29616266)
chr4 (198-262)||(53200628-53200693)
chr4 (198-262)||(25978596-25978660)
chr4 (198-262)||(26083376-26083440)
chr4 (108-249)||(20644239-20644379)
chr4 (114-262)||(29592849-29592996)
chr4 (188-262)||(43739488-43739562)
chr4 (100-233)||(9435338-9435471)
chr4 (202-262)||(11056083-11056143)
chr4 (210-258)||(47361402-47361450)
chr4 (179-262)||(9947947-9948030)
chr4 (180-262)||(39078680-39078762)
chr4 (180-262)||(52673830-52673912)
chr4 (180-249)||(22318382-22318451)
chr4 (214-262)||(6973898-6973946)
chr4 (179-230)||(40792435-40792486)
chr4 (179-246)||(43893595-43893662)
chr4 (180-246)||(31445878-31445943)
chr4 (180-246)||(38520518-38520584)
chr4 (180-221)||(41720862-41720903)
chr4 (91-171)||(985214-985293)
chr4 (125-218)||(14296562-14296654)
chr4 (125-218)||(14314810-14314902)
chr4 (181-233)||(45577706-45577758)
chr4 (204-258)||(13110370-13110425)
chr4 (126-221)||(42772724-42772818)
[»] scaffold0169 (2 HSPs)
scaffold0169 (125-262)||(12534-12670)
scaffold0169 (125-262)||(18052-18188)
[»] chr1 (63 HSPs)
chr1 (125-262)||(16386825-16386961)
chr1 (125-262)||(844791-844927)
chr1 (113-262)||(16437321-16437469)
chr1 (91-262)||(45490942-45491113)
chr1 (93-262)||(6711113-6711282)
chr1 (93-262)||(7183856-7184025)
chr1 (125-262)||(35387378-35387514)
chr1 (179-262)||(1351502-1351585)
chr1 (125-262)||(12890209-12890345)
chr1 (125-262)||(16451098-16451234)
chr1 (91-262)||(17887883-17888055)
chr1 (125-262)||(28340370-28340506)
chr1 (125-262)||(30105747-30105883)
chr1 (125-262)||(42510496-42510632)
chr1 (125-262)||(51264466-51264602)
chr1 (118-262)||(25539819-25539962)
chr1 (118-262)||(31004096-31004239)
chr1 (125-258)||(44738113-44738244)
chr1 (98-261)||(1601116-1601277)
chr1 (125-262)||(26118282-26118418)
chr1 (125-262)||(32270324-32270460)
chr1 (179-259)||(16476225-16476305)
chr1 (125-262)||(24339705-24339840)
chr1 (179-262)||(32289411-32289494)
chr1 (179-262)||(41967916-41967999)
chr1 (125-262)||(50540315-50540451)
chr1 (180-262)||(26764862-26764944)
chr1 (180-262)||(39281919-39282001)
chr1 (180-262)||(41972936-41973018)
chr1 (118-262)||(45658785-45658928)
chr1 (125-262)||(17327716-17327852)
chr1 (125-259)||(42705308-42705441)
chr1 (183-262)||(5109756-5109835)
chr1 (179-262)||(11772699-11772782)
chr1 (180-262)||(6029368-6029450)
chr1 (180-262)||(50382470-50382552)
chr1 (194-262)||(10384406-10384474)
chr1 (113-262)||(16704684-16704833)
chr1 (198-262)||(38087063-38087127)
chr1 (179-262)||(13994142-13994225)
chr1 (98-261)||(51703232-51703393)
chr1 (118-262)||(42512837-42512980)
chr1 (108-250)||(38663086-38663227)
chr1 (133-259)||(49303424-49303548)
chr1 (125-262)||(3414920-3415057)
chr1 (118-262)||(50304615-50304758)
chr1 (98-168)||(4895337-4895407)
chr1 (205-262)||(23799604-23799661)
chr1 (109-242)||(2761643-2761774)
chr1 (180-262)||(46154925-46155014)
chr1 (180-262)||(6144053-6144135)
chr1 (99-171)||(30798848-30798920)
chr1 (99-259)||(25343279-25343438)
chr1 (179-228)||(46447688-46447737)
chr1 (180-239)||(16643272-16643331)
chr1 (179-262)||(26733579-26733662)
chr1 (49-87)||(4895337-4895375)
chr1 (196-262)||(17291620-17291685)
chr1 (179-248)||(7837157-7837226)
chr1 (180-233)||(40856172-40856225)
chr1 (188-249)||(570419-570482)
chr1 (198-262)||(6771411-6771475)
chr1 (214-262)||(21763170-21763218)
[»] scaffold0014 (1 HSPs)
scaffold0014 (125-262)||(101911-102047)
[»] chr6 (46 HSPs)
chr6 (125-262)||(15277311-15277447)
chr6 (98-262)||(10959935-10960098)
chr6 (133-261)||(24242634-24242761)
chr6 (93-262)||(3932838-3933007)
chr6 (93-262)||(2614825-2614994)
chr6 (125-262)||(3259645-3259781)
chr6 (125-262)||(11613822-11613958)
chr6 (108-261)||(31870132-31870284)
chr6 (125-262)||(32132411-32132547)
chr6 (179-261)||(166955-167037)
chr6 (180-262)||(24203378-24203460)
chr6 (93-259)||(17867764-17867930)
chr6 (93-259)||(17877547-17877713)
chr6 (125-262)||(10324142-10324278)
chr6 (179-262)||(11279143-11279226)
chr6 (125-262)||(15276968-15277104)
chr6 (179-262)||(18057534-18057617)
chr6 (179-262)||(32409883-32409966)
chr6 (125-262)||(34176792-34176928)
chr6 (107-262)||(10485101-10485255)
chr6 (179-262)||(14925487-14925570)
chr6 (179-262)||(17443277-17443360)
chr6 (108-245)||(27824698-27824834)
chr6 (187-259)||(4494149-4494221)
chr6 (180-262)||(9902689-9902771)
chr6 (179-262)||(11382079-11382160)
chr6 (179-262)||(3379725-3379808)
chr6 (136-262)||(34684016-34684140)
chr6 (179-262)||(3290687-3290768)
chr6 (180-251)||(8177923-8177994)
chr6 (183-262)||(29054375-29054454)
chr6 (179-245)||(7396173-7396239)
chr6 (180-262)||(11212273-11212355)
chr6 (116-247)||(29424613-29424743)
chr6 (198-262)||(18597189-18597253)
chr6 (204-251)||(14808043-14808090)
chr6 (200-262)||(11675405-11675467)
chr6 (180-249)||(32860067-32860136)
chr6 (105-171)||(28068753-28068819)
chr6 (118-171)||(32614059-32614112)
chr6 (98-171)||(10552710-10552785)
chr6 (210-249)||(13415781-13415820)
chr6 (196-259)||(23636255-23636318)
chr6 (179-262)||(35004159-35004242)
chr6 (28-74)||(8342783-8342829)
chr6 (201-242)||(9200439-9200480)
[»] chr2 (52 HSPs)
chr2 (125-262)||(17540676-17540813)
chr2 (125-262)||(32497877-32498013)
chr2 (125-262)||(5278826-5278962)
chr2 (125-262)||(2645078-2645214)
chr2 (125-262)||(7258858-7258995)
chr2 (179-259)||(30798484-30798564)
chr2 (133-262)||(7761565-7761693)
chr2 (125-262)||(9732922-9733058)
chr2 (125-262)||(16104236-16104372)
chr2 (179-262)||(19513681-19513764)
chr2 (125-262)||(34338772-34338908)
chr2 (125-262)||(35114747-35114883)
chr2 (91-262)||(42706285-42706457)
chr2 (98-262)||(11114807-11114970)
chr2 (180-262)||(33889259-33889341)
chr2 (179-262)||(9717239-9717322)
chr2 (179-262)||(37308670-37308753)
chr2 (125-262)||(44284591-44284727)
chr2 (180-262)||(26418939-26419021)
chr2 (93-262)||(18685765-18685934)
chr2 (180-261)||(37003861-37003942)
chr2 (133-262)||(12672466-12672594)
chr2 (179-262)||(28824549-28824632)
chr2 (108-262)||(32766496-32766650)
chr2 (125-262)||(3913452-3913588)
chr2 (98-262)||(16177875-16178036)
chr2 (125-262)||(33366572-33366708)
chr2 (188-262)||(1247171-1247245)
chr2 (188-262)||(40692321-40692395)
chr2 (182-262)||(26981701-26981781)
chr2 (125-261)||(4641478-4641613)
chr2 (125-262)||(30326324-30326459)
chr2 (179-262)||(40832461-40832544)
chr2 (93-261)||(2086001-2086169)
chr2 (179-259)||(6896183-6896263)
chr2 (198-262)||(38623296-38623360)
chr2 (179-262)||(38993063-38993146)
chr2 (180-262)||(12939292-12939374)
chr2 (180-262)||(13829454-13829536)
chr2 (180-262)||(41366102-41366184)
chr2 (93-262)||(42365506-42365675)
chr2 (125-262)||(10399862-10399998)
chr2 (212-261)||(8112348-8112397)
chr2 (121-262)||(1230869-1231009)
chr2 (108-249)||(26796174-26796313)
chr2 (180-262)||(41934597-41934679)
chr2 (202-252)||(45463112-45463162)
chr2 (214-250)||(27462806-27462842)
chr2 (183-262)||(36843481-36843560)
chr2 (113-166)||(1247105-1247158)
chr2 (180-262)||(30712872-30712958)
chr2 (201-261)||(18278939-18278999)
[»] scaffold0054 (1 HSPs)
scaffold0054 (125-262)||(23539-23673)
[»] scaffold0004 (1 HSPs)
scaffold0004 (125-262)||(372962-373098)
[»] scaffold0208 (1 HSPs)
scaffold0208 (179-262)||(2336-2419)
[»] scaffold0181 (1 HSPs)
scaffold0181 (125-258)||(19092-19224)
[»] scaffold0360 (1 HSPs)
scaffold0360 (179-262)||(15379-15462)
[»] scaffold0098 (1 HSPs)
scaffold0098 (99-262)||(51374-51536)
[»] scaffold0027 (1 HSPs)
scaffold0027 (126-262)||(15135-15270)
[»] scaffold0025 (1 HSPs)
scaffold0025 (180-259)||(5441-5520)
[»] scaffold0729 (1 HSPs)
scaffold0729 (198-262)||(4577-4641)
[»] scaffold0650 (1 HSPs)
scaffold0650 (179-262)||(1641-1724)
[»] scaffold0280 (1 HSPs)
scaffold0280 (179-262)||(13685-13768)
[»] scaffold0957 (1 HSPs)
scaffold0957 (134-262)||(2494-2620)
[»] scaffold0050 (1 HSPs)
scaffold0050 (201-261)||(42949-43009)
[»] scaffold0155 (1 HSPs)
scaffold0155 (116-245)||(33559-33687)
[»] scaffold0077 (1 HSPs)
scaffold0077 (111-262)||(7456-7610)


Alignment Details
Target: chr3 (Bit Score: 107; Significance: 1e-53; HSPs: 56)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 88 - 248
Target Start/End: Original strand, 44000187 - 44000346
Alignment:
Q  88 aataatacatcacaagacaaaacaatacaagacaaacttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttg 187  Q
    ||||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||||||||||||||||||||||||||       |||||||||    
T  44000187 aataatacatcacaagacaaaacaatacaagacaaacttttatggtattgaataatttttggtcttatacgatttttggtggac-aaaaaactatttttg 44000285  T
Q  188 tatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaa 248  Q
    ||||| ||||||||||||||||||||||||| |||||||||||||| |||||||| |||||    
T  44000286 tatttcagataacttgtacgtgggacaaaaaattgtgatgtggtttagtgagggaaaaaaa 44000346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 93 - 261
Target Start/End: Original strand, 2135000 - 2135168
Alignment:
Q  93 tacatcacaagacaaaacaatacaagacaaactttt-atagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatt 191  Q
    |||| |||||| || ||||| |||||||||| |||| || |||||||||||||||| || ||||||||||||||  ||||       ||||||| |||||    
T  2135000 tacaacacaaggcagaacaacacaagacaaattttttatggcattgagtaattttttgttttatacgatttttgagggacaaagtg-ctattttggtatt 2135098  T
Q  192 taagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgt 261  Q
    | |||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  2135099 ttagataatttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttttgt 2135168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 93 - 262
Target Start/End: Original strand, 28675720 - 28675889
Alignment:
Q  93 tacatcacaagacaaaacaatacaagacaaactttt-atagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatt 191  Q
    |||| |||||| || ||||| ||| |||||| |||| || |||||||||||||||| || ||||||||||||||  ||||       ||||||| |||||    
T  28675720 tacaacacaaggcagaacaacacaggacaaattttttatggcattgagtaattttttgttttatacgatttttgagggacaaaatg-ctattttggtatt 28675818  T
Q  192 taagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    | ||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  28675819 ttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtc 28675889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 125 - 262
Target Start/End: Complemental strand, 39052960 - 39052824
Alignment:
Q  125 ttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaaagttgtg 224  Q
    ||||||||||||||||||||| | || ||||||||||||||| ||||        |||||| |||||| ||| |||||||||||||||||||||||||||    
T  39052960 ttttatagcattgagtaatttgttgttttatacgatttttgggggacaaaatgt-tattttggtattttagacaacttgtacgtgggacaaaaagttgtg 39052862  T
Q  225 atgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
     |||||||||||||| ||||||||||||||||||||||    
T  39052861 ttgtggtttggtgagagacaaaaatatgagtttttgtc 39052824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 125 - 262
Target Start/End: Original strand, 24571244 - 24571380
Alignment:
Q  125 ttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaaagttgtg 224  Q
    |||||| |||||||||||||| | || |||| |||||||||| ||||       |||||||||||||| ||| ||||||||| |||||||||||||||||    
T  24571244 ttttatggcattgagtaatttgttgttttattcgatttttgggggacaaaatc-ctatttttgtattttagacaacttgtacatgggacaaaaagttgtg 24571342  T
Q  225 atgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
     |||||||||||||||||||||||||||||||||||||    
T  24571343 ctgtggtttggtgagggacaaaaatatgagtttttgtc 24571380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 125 - 262
Target Start/End: Original strand, 29584838 - 29584974
Alignment:
Q  125 ttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaaagttgtg 224  Q
    |||||| ||||||||||||||||  | ||||||||||||||  ||||       ||||||| |||||| ||| |||||||||||||||||||||||||||    
T  29584838 ttttattgcattgagtaattttttattttatacgatttttgaaggacaaaatg-ctattttggtattttagacaacttgtacgtgggacaaaaagttgtg 29584936  T
Q  225 atgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
     |||||||||||||||||||||||||||||||||||||    
T  29584937 ttgtggtttggtgagggacaaaaatatgagtttttgtc 29584974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 125 - 262
Target Start/End: Original strand, 44116902 - 44117038
Alignment:
Q  125 ttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaaagttgtg 224  Q
    |||||| |||||||||||||||| || ||||||||||||||  ||||       |||||||||||||| ||| |||||||||||||||||||||||||||    
T  44116902 ttttatggcattgagtaattttttgttttatacgatttttgagggacaaaatg-ctatttttgtattttagacaacttgtacgtgggacaaaaagttgtg 44117000  T
Q  225 atgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
      |||||||| |||||||||||||||||||||||||||    
T  44117001 cagtggtttgatgagggacaaaaatatgagtttttgtc 44117038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 43999897 - 43999983
Alignment:
Q  1 tgaaacatacgcgcgttttagcaaaagagtatatactagacaaaacatcacaagacaaaacaacacaatacaaacttttatggtatt 87  Q
    ||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  43999897 tgaaacatacgtgcgttttaacaaaagagtatgtactagacaaaacatcacaagacaaaacaacacaagacaaacttttatggtatt 43999983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 125 - 262
Target Start/End: Complemental strand, 1344829 - 1344693
Alignment:
Q  125 ttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaaagttgtg 224  Q
    |||||| |||||||||||||||| || ||||||||||||||  ||||       ||||||| |||||| ||| |||||||||||| ||||||||||||||    
T  1344829 ttttatggcattgagtaattttttgttttatacgatttttgagggacaaaatg-ctattttggtattttagacaacttgtacgtgagacaaaaagttgtg 1344731  T
Q  225 atgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
     |||||||||||||||||||||||||||||||| ||||    
T  1344730 ctgtggtttggtgagggacaaaaatatgagtttctgtc 1344693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 125 - 262
Target Start/End: Complemental strand, 3864796 - 3864661
Alignment:
Q  125 ttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaaagttgtg 224  Q
    |||||| |||||||||||||||| || ||||| ||||||||| ||||       ||||||| |||||| ||| |||||||||||||||||||||||||||    
T  3864796 ttttatggcattgagtaattttttgttttatatgatttttgg-ggacaaaatg-ctattttggtattttagacaacttgtacgtgggacaaaaagttgtg 3864699  T
Q  225 atgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
     |||||||||| ||||||||||||||||||||||||||    
T  3864698 ttgtggtttggcgagggacaaaaatatgagtttttgtc 3864661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 125 - 262
Target Start/End: Complemental strand, 12349293 - 12349157
Alignment:
Q  125 ttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaaagttgtg 224  Q
    |||||| |||||||||||||||| || ||||||||||||||  ||||       ||||||| |||||| ||| ||||||||||||||||| |||||||||    
T  12349293 ttttatggcattgagtaattttttgttttatacgatttttgagggacaaaatg-ctattttggtattttagacaacttgtacgtgggacataaagttgtg 12349195  T
Q  225 atgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
     |||||||||||||| ||||||||||||||||||||||    
T  12349194 ctgtggtttggtgagagacaaaaatatgagtttttgtc 12349157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 179 - 262
Target Start/End: Complemental strand, 20609717 - 20609634
Alignment:
Q  179 ctatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    ||||||| |||||| ||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  20609717 ctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttttgtc 20609634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 125 - 262
Target Start/End: Complemental strand, 21221482 - 21221346
Alignment:
Q  125 ttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaaagttgtg 224  Q
    |||||| |||||||||||||||| || |||||| |||||||  ||||       ||||||| |||||| ||| |||||||||||| ||||||||||||||    
T  21221482 ttttatggcattgagtaattttttgttttatacaatttttgagggacaaaatg-ctattttggtattttagacaacttgtacgtgagacaaaaagttgtg 21221384  T
Q  225 atgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
     |||||||||||||||||||||||||||||||||||||    
T  21221383 ttgtggtttggtgagggacaaaaatatgagtttttgtc 21221346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 125 - 262
Target Start/End: Complemental strand, 25860543 - 25860407
Alignment:
Q  125 ttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaaagttgtg 224  Q
    |||||| ||| |||||||||||| || ||||||||||||||| | ||       ||||||  |||||| ||| |||||||||||| ||||||||||||||    
T  25860543 ttttatggcaatgagtaattttttgttttatacgatttttggagaacaaaatg-ctatttcggtattttagacaacttgtacgtgagacaaaaagttgtg 25860445  T
Q  225 atgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    ||||||||||||||||||||||||||||||||||||||    
T  25860444 atgtggtttggtgagggacaaaaatatgagtttttgtc 25860407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 125 - 262
Target Start/End: Original strand, 34026630 - 34026766
Alignment:
Q  125 ttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaaagttgtg 224  Q
    |||||| | |||||||||||||| || ||||||||||||||  ||||       ||||||| |||||| ||| ||||||||||||||||||||| |||||    
T  34026630 ttttatggtattgagtaattttttgttttatacgatttttgagggacaaaatg-ctattttggtattttagacaacttgtacgtgggacaaaaaattgtg 34026728  T
Q  225 atgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
     |||||||||||||||||||||||||||||||||||||    
T  34026729 ttgtggtttggtgagggacaaaaatatgagtttttgtc 34026766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 133 - 262
Target Start/End: Complemental strand, 47958546 - 47958418
Alignment:
Q  133 cattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtt 232  Q
    ||||||||||||||| || ||||||||||||||  ||||       ||||||| |||||| ||| ||||||||||||||||||||||||||| ||| |||    
T  47958546 cattgagtaattttttgttttatacgatttttgagggacaaaatg-ctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtagtt 47958448  T
Q  233 tggtgagggacaaaaatatgagtttttgtc 262  Q
    ||||||||||||||||||||||||||||||    
T  47958447 tggtgagggacaaaaatatgagtttttgtc 47958418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 118 - 262
Target Start/End: Complemental strand, 51925337 - 51925194
Alignment:
Q  118 gacaaacttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaa 217  Q
    |||||| |||||| ||||||| |||||||| || ||||||||||||||| ||||        |||||| ||||| || | ||||||||||||||||||||    
T  51925337 gacaaatttttatggcattgaataattttttgttttatacgatttttgggggacgaaatgt-tattttggtattaaaaacaacttgtacgtgggacaaaa 51925239  T
Q  218 agttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    ||||||| |||||||||||||||||||||||||| ||||||||||    
T  51925238 agttgtgttgtggtttggtgagggacaaaaatatcagtttttgtc 51925194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 91 - 262
Target Start/End: Original strand, 40094431 - 40094602
Alignment:
Q  91 aatacatcacaagacaaaacaatacaagacaaactttt-atagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgta 189  Q
    |||||| |||||| || ||||| ||| |||||| |||| || |||||||||||||||| || |||| |||||||||  ||||       ||||||| |||    
T  40094431 aatacaacacaaggcagaacaacacatgacaaaatttttatggcattgagtaattttttgttttatgcgatttttgagggacaaaatg-ctattttggta 40094529  T
Q  190 tttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    ||| ||| || |||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40094530 ttttagacaatttgtacgtgaaacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 40094602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 180 - 261
Target Start/End: Complemental strand, 42636471 - 42636390
Alignment:
Q  180 tatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgt 261  Q
    |||||| |||||| ||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  42636471 tattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttttgt 42636390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 125 - 262
Target Start/End: Original strand, 38213317 - 38213453
Alignment:
Q  125 ttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaaagttgtg 224  Q
    |||||| ||| |||||||||||| || ||||||||||||||| ||||        |||||| |||||| ||| |||||||||||||||||||||||||||    
T  38213317 ttttatggcaatgagtaattttttgttttatacgatttttgggggacaaaatgg-tattttggtattttagacaacttgtacgtgggacaaaaagttgtg 38213415  T
Q  225 atgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
     |||||||| ||||| ||||||||||||||||||||||    
T  38213416 ttgtggtttcgtgagtgacaaaaatatgagtttttgtc 38213453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 133 - 262
Target Start/End: Complemental strand, 49749025 - 49748897
Alignment:
Q  133 cattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtt 232  Q
    |||||| |||||||| || ||||||||||||||| ||||        |||||| |||||||| | ||||||||||||||||||||||||||| |||||||    
T  49749025 cattgaataattttttgttttatacgatttttgggggacgaaatgt-tattttggtatttaaaacaacttgtacgtgggacaaaaagttgtgttgtggtt 49748927  T
Q  233 tggtgagggacaaaaatatgagtttttgtc 262  Q
    ||||||||||||||||||| ||||||||||    
T  49748926 tggtgagggacaaaaatatcagtttttgtc 49748897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 179 - 262
Target Start/End: Original strand, 21373946 - 21374029
Alignment:
Q  179 ctatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    ||||||| |||||| ||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||    
T  21373946 ctattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagattttgtc 21374029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 114 - 262
Target Start/End: Original strand, 29646017 - 29646165
Alignment:
Q  114 acaagacaaacttttatagcattgagtaatttttg-gtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtggga 212  Q
    |||||||||| |||||| ||||| | ||||||||  || ||||||||||||||| ||||       ||||||| |||||| | | |||||||||||||||    
T  29646017 acaagacaaatttttatggcattaaataatttttttgttttatacgatttttgggggacaaaatg-ctattttggtattttaaacaacttgtacgtggga 29646115  T
Q  213 caaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    |||||||||||||||||||||||||||||||||||||||  |||||||||    
T  29646116 caaaaagttgtgatgtggtttggtgagggacaaaaatatatgtttttgtc 29646165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 125 - 262
Target Start/End: Original strand, 51296544 - 51296680
Alignment:
Q  125 ttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaaagttgtg 224  Q
    |||||| | |||||||||||||| || ||||||||||||| | ||||       |||||||||||||| ||| ||||||||| | ||||||||| |||||    
T  51296544 ttttatggtattgagtaattttttgttttatacgattttttggggacaaaatg-ctatttttgtattttagacaacttgtacttaggacaaaaaattgtg 51296642  T
Q  225 atgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
     |||||||||||||||||||||||||||||||||||||    
T  51296643 ttgtggtttggtgagggacaaaaatatgagtttttgtc 51296680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 125 - 262
Target Start/End: Complemental strand, 53557917 - 53557781
Alignment:
Q  125 ttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaaagttgtg 224  Q
    |||||| |||||||||||||||| || ||||||||||||||  ||||       ||||||| |||||| ||| |||||||||||| ||||||||||||||    
T  53557917 ttttatggcattgagtaattttttgttttatacgatttttgaaggacaaaatg-ctattttggtattttagacaacttgtacgtgagacaaaaagttgtg 53557819  T
Q  225 atgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
      ||||||||||||||||||||| ||||||||||||||    
T  53557818 cagtggtttggtgagggacaaaactatgagtttttgtc 53557781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 125 - 262
Target Start/End: Complemental strand, 54622918 - 54622782
Alignment:
Q  125 ttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaaagttgtg 224  Q
    |||||| ||||||| |||||||| || ||||||||||||||| ||||       ||||||| |||||| ||| ||||||||||||||| |||||||||||    
T  54622918 ttttatggcattgaataattttttgttttatacgatttttgggggacgaaatg-ctattttggtattttagacaacttgtacgtgggataaaaagttgtg 54622820  T
Q  225 atgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
     |||||||| ||||| ||||||||||||||||||||||    
T  54622819 ttgtggtttcgtgagcgacaaaaatatgagtttttgtc 54622782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 180 - 262
Target Start/End: Complemental strand, 51259848 - 51259766
Alignment:
Q  180 tatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    |||||| |||||| ||| |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||    
T  51259848 tattttggtattttagacaacttgtacgtgggacaaaaagttgtgccgtggtttggtgagggacaaaaatatgagtttttgtc 51259766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 93 - 262
Target Start/End: Complemental strand, 4851611 - 4851444
Alignment:
Q  93 tacatcacaagacaaaacaatacaagacaaactttt-atagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatt 191  Q
    |||| |||||| || ||||| ||| |||||| |||| || |||||||||||||||| || ||||||||||||||  ||||       ||||||| |||||    
T  4851611 tacaacacaaggcagaacaagacaggacaaattttttatggcattgagtaattttttgttttatacgatttttgagggacaaaatg-ctattttggtatt 4851513  T
Q  192 taagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    | ||| ||||||||||||||||||||||||||| ||||| ||||||||||||||||  |||||||||||||    
T  4851512 ttagacaacttgtacgtgggacaaaaagttgtgttgtgggttggtgagggacaaaa--atgagtttttgtc 4851444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 108 - 262
Target Start/End: Complemental strand, 31883161 - 31883008
Alignment:
Q  108 aacaatacaagacaaacttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacg 207  Q
    ||||| ||| |||||| ||||||  |||||| |||||||| || ||||||||||||||| ||||       |||||||  ||||| ||| ||||||||||    
T  31883161 aacaacacaggacaaatttttatgacattgaataattttttgttttatacgatttttgggggacaaaatg-ctattttgatattttagacaacttgtacg 31883063  T
Q  208 tgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    ||||||||||||||||| ||||||||| ||||| |||||||||| ||||||||||    
T  31883062 tgggacaaaaagttgtgctgtggtttgctgaggcacaaaaatatcagtttttgtc 31883008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 180 - 262
Target Start/End: Complemental strand, 25927395 - 25927313
Alignment:
Q  180 tatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    |||||| |||||| ||| ||||||||||||||||||||||||||| |||| |||||| |||||||||||||||||||||||||    
T  25927395 tattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtgttttggtaagggacaaaaatatgagtttttgtc 25927313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 118 - 262
Target Start/End: Complemental strand, 33364907 - 33364764
Alignment:
Q  118 gacaaacttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaa 217  Q
    |||||| ||||||  |||||| |||||||| || ||||||||||||||| ||||       |||||||  ||||| ||| |||||||||||| |||||||    
T  33364907 gacaaatttttatgacattgaataattttttgttttatacgatttttgggggacaaaatg-ctattttgatattttagacaacttgtacgtgagacaaaa 33364809  T
Q  218 agttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    ||||||||||||||||| |||||| ||||||||| ||||||||||    
T  33364808 agttgtgatgtggtttgctgaggggcaaaaatatcagtttttgtc 33364764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 109 - 262
Target Start/End: Original strand, 20254991 - 20255143
Alignment:
Q  109 acaatacaagacaaactttt-atagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacg 207  Q
    |||| |||||||||| |||| || |||||||||||||||| || ||||| ||||||||  ||||        |||||| |||||| ||| |||||||| |    
T  20254991 acaacacaagacaaattttttatggcattgagtaattttttgttttataagatttttgagggacaaaatgt-tattttggtattttagacaacttgta-g 20255088  T
Q  208 tgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    |||||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  20255089 tgggacaagaagttgtgctgtggtttggtgagggacaaaaatatgagtttttgtc 20255143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 93 - 262
Target Start/End: Complemental strand, 26282542 - 26282373
Alignment:
Q  93 tacatcacaagacaaaacaatacaagacaaactttt-atagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatt 191  Q
    |||| ||||||||| ||||  ||| |||||| |||| || ||||||| |||||||| || ||||||||||||||  ||||       ||||||| |||||    
T  26282542 tacaacacaagacagaacagcacatgacaaattttttatggcattgaataattttttgttttatacgatttttgagggacaaaatg-ctattttggtatt 26282444  T
Q  192 taagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    | ||| ||||| ||||||||||||||||||||| ||||||||| |||| ||||||||||| ||||||||||    
T  26282443 ttagacaacttatacgtgggacaaaaagttgtgctgtggtttgatgagagacaaaaatataagtttttgtc 26282373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 179 - 262
Target Start/End: Original strand, 3964304 - 3964387
Alignment:
Q  179 ctatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    ||||||| |||||| ||| ||||||||| ||||||||||||||||| |||||||||||||||||||||||| | ||||||||||    
T  3964304 ctattttggtattttagacaacttgtacatgggacaaaaagttgtgctgtggtttggtgagggacaaaaatttcagtttttgtc 3964387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 179 - 262
Target Start/End: Original strand, 50678814 - 50678897
Alignment:
Q  179 ctatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    ||||||| |||||| ||| |||||||||||| |||||||||||||| |||||||||||||| ||||||||||| ||||||||||    
T  50678814 ctattttggtattttagacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagagacaaaaatatcagtttttgtc 50678897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 179 - 262
Target Start/End: Original strand, 19906778 - 19906861
Alignment:
Q  179 ctatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    ||||||| || ||| ||| |||||||||||| |||||||||||||| |||||||||||||||||||||||| | ||||||||||    
T  19906778 ctattttggtgttttagacaacttgtacgtgagacaaaaagttgtgctgtggtttggtgagggacaaaaatttcagtttttgtc 19906861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 179 - 262
Target Start/End: Complemental strand, 3867718 - 3867635
Alignment:
Q  179 ctatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    ||||||| || ||| ||| ||||||||||| ||||||||||||||| |||||||||||||||||||||||| | || |||||||    
T  3867718 ctattttggtgttttagaaaacttgtacgtaggacaaaaagttgtgctgtggtttggtgagggacaaaaatttcaggttttgtc 3867635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 125 - 239
Target Start/End: Complemental strand, 3695414 - 3695301
Alignment:
Q  125 ttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaaagttgtg 224  Q
    |||||| |||||||||||||| | || |||||| |||||||| |||        ||||||| |||||| ||| |||||||||||||||||||| ||||||    
T  3695414 ttttatggcattgagtaatttgttgttttatacaatttttggggga-taaaatactattttggtattttagacaacttgtacgtgggacaaaaggttgtg 3695316  T
Q  225 atgtggtttggtgag 239  Q
    |||||||||||||||    
T  3695315 atgtggtttggtgag 3695301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 108 - 249
Target Start/End: Complemental strand, 28625058 - 28624919
Alignment:
Q  108 aacaatacaagacaaacttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacg 207  Q
    ||||| ||||||||||||||||| | ||||| |||||||| |||||||| |||||||||| |||         |||||||||||| ||||||||| ||||    
T  28625058 aacaacacaagacaaacttttatggtattgaataattttttgtcttataagatttttggtagactaaaatg--atttttgtattttagataacttatacg 28624961  T
Q  208 tgggacaaaaagttgtgatgtggtttggtgagggacaaaaat 249  Q
    | ||||||||| || || |||| |||  ||||||||||||||    
T  28624960 taggacaaaaatttatgttgtgctttaatgagggacaaaaat 28624919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 179 - 262
Target Start/End: Complemental strand, 50386525 - 50386442
Alignment:
Q  179 ctatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    |||||||  ||||| ||| ||||||||||| ||||||||||||||| ||||||||| ||||| |||||||||| | ||||||||    
T  50386525 ctattttgatattttagacaacttgtacgtaggacaaaaagttgtgctgtggtttgttgaggcacaaaaatatcaatttttgtc 50386442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 125 - 248
Target Start/End: Original strand, 5442254 - 5442376
Alignment:
Q  125 ttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaaagttgtg 224  Q
    |||||| ||||||| |||||||| || ||||||||||||||  |||        |||||||  ||||| ||| | |||||||||||||||||||||||||    
T  5442254 ttttatggcattgaataattttttgttttatacgatttttgaggga-taaaatgctattttgatattttagacagcttgtacgtgggacaaaaagttgtg 5442352  T
Q  225 atgtggtttggtgagggacaaaaa 248  Q
     |||| ||||||||||||||||||    
T  5442353 ctgtgatttggtgagggacaaaaa 5442376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 179 - 249
Target Start/End: Original strand, 19190717 - 19190786
Alignment:
Q  179 ctatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaat 249  Q
    |||||||||||||| ||||||||| || ||| |||||||| |||||||||||||| |||||||||| ||||    
T  19190717 ctatttttgtattttagataacttatatgtgagacaaaaa-ttgtgatgtggtttagtgagggacacaaat 19190786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 179 - 249
Target Start/End: Complemental strand, 22484812 - 22484742
Alignment:
Q  179 ctatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaat 249  Q
    |||||||||||||| ||| ||||| ||||||||||||||||||||| ||| ||||||  ||| ||||||||    
T  22484812 ctatttttgtattttagacaacttatacgtgggacaaaaagttgtgttgtagtttggcaaggaacaaaaat 22484742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 198 - 262
Target Start/End: Original strand, 25954485 - 25954549
Alignment:
Q  198 aacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    ||||| || ||| |||||||||||||| |||  ||||||||| ||||||||||||||||||||||    
T  25954485 aacttatatgtgagacaaaaagttgtgctgtaatttggtgagagacaaaaatatgagtttttgtc 25954549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 125 - 262
Target Start/End: Complemental strand, 34351490 - 34351354
Alignment:
Q  125 ttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaaagttgtg 224  Q
    |||||||| ||||| |||||| ||||||| |||||||||| |||||         ||||||  ||||| ||| |||||||| ||| ||||||||||||||    
T  34351490 ttttatagtattgaataatttatggtcttgtacgattttttgtggataaaatgt-tattttgatattttagacaacttgtatgtgcgacaaaaagttgtg 34351392  T
Q  225 atgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
     ||||||||| |||||||||| ||| |  |||||||||    
T  34351391 ttgtggtttgatgagggacaataatttttgtttttgtc 34351354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 179 - 262
Target Start/End: Original strand, 24721501 - 24721584
Alignment:
Q  179 ctatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    ||||||| || ||| ||| |||||||| |||||| ||||||||||| ||||||||| ||||| || ||||| | ||||||||||    
T  24721501 ctattttggtgttttagacaacttgtatgtgggataaaaagttgtgttgtggtttgttgaggtaccaaaattttagtttttgtc 24721584  T

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Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 180 - 262
Target Start/End: Complemental strand, 39215537 - 39215455
Alignment:
Q  180 tatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    |||||| |||||| ||| ||||||||||||||||||||| || |||| ||||| ||| ||||  |||||| | ||||||||||    
T  39215537 tattttggtattttagacaacttgtacgtgggacaaaaaattatgatttggttcggtaaggggtaaaaatttcagtttttgtc 39215455  T

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Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 45 - 87
Target Start/End: Original strand, 44000193 - 44000235
Alignment:
Q  45 acatcacaagacaaaacaacacaatacaaacttttatggtatt 87  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  44000193 acatcacaagacaaaacaatacaagacaaacttttatggtatt 44000235  T

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Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 179 - 245
Target Start/End: Original strand, 44267758 - 44267824
Alignment:
Q  179 ctatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaa 245  Q
    |||||||||||||| ||| || ||||| |||||| |||||||| || |||||||||| |||||||||    
T  44267758 ctatttttgtattttagacaatttgtatgtgggataaaaagttatgttgtggtttggcgagggacaa 44267824  T

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Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 118 - 262
Target Start/End: Complemental strand, 45691029 - 45690892
Alignment:
Q  118 gacaaacttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaa 217  Q
    |||||| |||||||||||||| |||||||| || ||||||||||||||| ||||       | ||||| |||||| ||| ||||| | |||| |||||||    
T  45691029 gacaaatttttatagcattgaataattttt-gttttatacgatttttggaggac-gaaatgcgattttggtattttagacaacttatgcgtgagacaaaa 45690932  T
Q  218 agttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    ||||||| ||     |||||||||| |||||||| ||||||||||    
T  45690931 agttgtgctg-----tggtgagggagaaaaatatcagtttttgtc 45690892  T

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Target: chr3; HSP #51
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 180 - 262
Target Start/End: Original strand, 52300454 - 52300535
Alignment:
Q  180 tatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    |||||| || ||| ||| ||||||||| ||||||||||| ||| | ||||||||||||| |||||||||| | ||||||||||    
T  52300454 tattttggtgttttagacaacttgtac-tgggacaaaaaattgcgttgtggtttggtgatggacaaaaatttcagtttttgtc 52300535  T

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Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 130
Target Start/End: Original strand, 43999941 - 43999977
Alignment:
Q  94 acatcacaagacaaaacaatacaagacaaacttttat 130  Q
    ||||||||||||||||||| |||||||||||||||||    
T  43999941 acatcacaagacaaaacaacacaagacaaacttttat 43999977  T

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Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 262
Target Start/End: Complemental strand, 8648625 - 8648543
Alignment:
Q  180 tatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    |||||| |||||| ||| || |||||| || |||||||||||||||||| |||| || ||| |||| ||| | ||||||||||    
T  8648625 tattttggtattttagacaatttgtacttgtgacaaaaagttgtgatgtagtttagttaggaacaagaatttcagtttttgtc 8648543  T

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Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 166
Target Start/End: Original strand, 10747169 - 10747221
Alignment:
Q  114 acaagacaaacttttatagcattgagtaatttttggtcttatacgatttttgg 166  Q
    |||||||||| ||||||  |||||| |||||||| || |||||||||||||||    
T  10747169 acaagacaaatttttatgacattgaataattttttgttttatacgatttttgg 10747221  T

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Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 247
Target Start/End: Complemental strand, 42547423 - 42547371
Alignment:
Q  195 gataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaa 247  Q
    ||||||||||||||| |||||||||||||| ||| |||| || || |||||||    
T  42547423 gataacttgtacgtgagacaaaaagttgtgttgtagtttagtaagagacaaaa 42547371  T

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Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 125 - 165
Target Start/End: Complemental strand, 53046763 - 53046723
Alignment:
Q  125 ttttatagcattgagtaatttttggtcttatacgatttttg 165  Q
    |||||| |||||||||||||||| || ||||||||||||||    
T  53046763 ttttatggcattgagtaattttttgttttatacgatttttg 53046723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 86; Significance: 3e-41; HSPs: 61)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 88 - 262
Target Start/End: Original strand, 29661251 - 29661425
Alignment:
Q  88 aataatacatcacaagacaaaacaatacaagacaaactttt-atagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctattttt 186  Q
    |||| |||| |||||| || ||||| |||||||||| |||| ||||||||||||||||||| || ||||||||||||||  ||||       |||||||     
T  29661251 aatagtacaacacaaggcagaacaacacaagacaaattttttatagcattgagtaattttttgttttatacgatttttgtgggacaaaatg-ctattttg 29661349  T
Q  187 gtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    |||||| ||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||    
T  29661350 gtattttagataacttgtacgtgggataaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttttgtc 29661425  T

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Target: chr7; HSP #2
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 93 - 262
Target Start/End: Complemental strand, 11322047 - 11321878
Alignment:
Q  93 tacatcacaagacaaaacaatacaagacaaactttt-atagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatt 191  Q
    |||| |||||| || |||| |||| |||||| |||| || |||||||||||||||| || ||||||||||||||  ||||       ||||||| |||||    
T  11322047 tacaacacaaggcagaacagtacatgacaaattttttatggcattgagtaattttttgttttatacgatttttgagggacaaaatg-ctattttggtatt 11321949  T
Q  192 taagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    | ||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  11321948 ttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttttgtc 11321878  T

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Target: chr7; HSP #3
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 124 - 262
Target Start/End: Original strand, 21784836 - 21784973
Alignment:
Q  124 cttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaaagttgt 223  Q
    ||||||| |||||||||||||||  || ||||||||||||||| ||||       ||||||| |||||| ||| ||||||||||||||||||||||||||    
T  21784836 cttttatggcattgagtaattttatgttttatacgatttttggaggacaaaatg-ctattttggtattttagacaacttgtacgtgggacaaaaagttgt 21784934  T
Q  224 gatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    | |||||||||||||||||||||||||||||||||||||    
T  21784935 gttgtggtttggtgagggacaaaaatatgagtttttgtc 21784973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 93 - 262
Target Start/End: Original strand, 46633630 - 46633799
Alignment:
Q  93 tacatcacaagacaaaacaatacaagacaaactttt-atagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatt 191  Q
    |||| |||||| || ||||| |||||||||| |||| || |||||||||||||||| || ||||||||||||||  ||||       ||||||| |||||    
T  46633630 tacaacacaaggcagaacaacacaagacaaattttttatggcattgagtaattttttgttttatacgatttttgagggacaaaatg-ctattttggtatt 46633728  T
Q  192 taagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    | ||| ||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  46633729 ttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggataaaaatatgagtttttgtc 46633799  T

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Target: chr7; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 125 - 262
Target Start/End: Original strand, 47953156 - 47953292
Alignment:
Q  125 ttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaaagttgtg 224  Q
    |||||| |||||||||||||||| || ||||||||||||||  ||||       ||||||| |||||| ||| |||||||||||||||||||||||||||    
T  47953156 ttttatggcattgagtaattttttgttttatacgatttttgagggacaaaatg-ctattttggtattttagacaacttgtacgtgggacaaaaagttgtg 47953254  T
Q  225 atgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
     |||||||||||||||||||||||||||||||||||||    
T  47953255 ctgtggtttggtgagggacaaaaatatgagtttttgtc 47953292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 99 - 259
Target Start/End: Original strand, 34117392 - 34117551
Alignment:
Q  99 acaagacaaaacaatacaagacaaacttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagata 198  Q
    |||||||| ||||| |||||||||| |||||| ||||||| |||||||| || ||||||||||||||| ||||       ||||||| | |||| ||| |    
T  34117392 acaagacagaacaacacaagacaaatttttatggcattgaataatttttcgttttatacgatttttgggggacgaaatg-ctattttggcattttagaca 34117490  T
Q  199 acttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagttttt 259  Q
    |||||||| ||| ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  34117491 acttgtacatggaacaaaaaattgtgatgtggtttggtgagggacaaaaatatgagttttt 34117551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 125 - 262
Target Start/End: Complemental strand, 41211330 - 41211193
Alignment:
Q  125 ttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaaagttgtg 224  Q
    |||||| |||||||||||||||| || |||||||||||||   |||        ||||||| |||||| ||| |||||||||||||||||||||||||||    
T  41211330 ttttatggcattgagtaattttttgttttatacgattttttagggataaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtg 41211231  T
Q  225 atgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
     |||||||||||||||||||||||||||||||||||||    
T  41211230 ctgtggtttggtgagggacaaaaatatgagtttttgtc 41211193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 125 - 262
Target Start/End: Complemental strand, 3922832 - 3922696
Alignment:
Q  125 ttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaaagttgtg 224  Q
    |||||| |||||||||| ||||| || ||||||||||||||  ||||       ||||||| |||||| |||||||||||||||||||||||||||||||    
T  3922832 ttttatggcattgagtatttttttgttttatacgatttttgagggacaaaatg-ctattttggtattttagataacttgtacgtgggacaaaaagttgtg 3922734  T
Q  225 atgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
     ||||||||||||||| |||||||||||||||||||||    
T  3922733 ctgtggtttggtgaggaacaaaaatatgagtttttgtc 3922696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 125 - 262
Target Start/End: Complemental strand, 10932686 - 10932550
Alignment:
Q  125 ttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaaagttgtg 224  Q
    |||||| |||||||||||||||| || ||||||||||||||  ||||       ||||||| |||||| ||| |||||||||||||||||||||||||||    
T  10932686 ttttatggcattgagtaattttttgttttatacgatttttgagggacaaaatg-ctattttggtattttagacaacttgtacgtgggacaaaaagttgtg 10932588  T
Q  225 atgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
     ||| |||||||||||||||||||||||||||||||||    
T  10932587 ttgtagtttggtgagggacaaaaatatgagtttttgtc 10932550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 125 - 262
Target Start/End: Complemental strand, 36769698 - 36769562
Alignment:
Q  125 ttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaaagttgtg 224  Q
    |||||| |||||||||||||||| || ||||||||||||||   |||       ||||||| |||||| ||| |||||||||||||||||||||||||||    
T  36769698 ttttatggcattgagtaattttttgttttatacgatttttgagagacaaaatg-ctattttggtattttagacaacttgtacgtgggacaaaaagttgtg 36769600  T
Q  225 atgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
     |||||||||||||||||||||||||||||||||||||    
T  36769599 ctgtggtttggtgagggacaaaaatatgagtttttgtc 36769562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 125 - 262
Target Start/End: Original strand, 40753121 - 40753257
Alignment:
Q  125 ttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaaagttgtg 224  Q
    |||||| |||||||||||||||| || ||||||||||||||  ||||       ||||||| |||||| ||| |||||||||||||||||||||||||||    
T  40753121 ttttatggcattgagtaattttttgttttatacgatttttgagggacaaaatg-ctattttggtattttagacaacttgtacgtgggacaaaaagttgtg 40753219  T
Q  225 atgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
     |||| ||||||||||||||||||||||||||||||||    
T  40753220 ctgtgatttggtgagggacaaaaatatgagtttttgtc 40753257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 91 - 258
Target Start/End: Original strand, 18386456 - 18386623
Alignment:
Q  91 aatacatcacaagacaaaacaatacaagacaaactttt-atagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgta 189  Q
    |||||| |||||| || ||||| ||| |||||| |||| ||  ||||||||||||||| || ||||||||||||||  ||||       ||||||| |||    
T  18386456 aatacaacacaaggcagaacaacacatgacaaattttttatgacattgagtaattttttgttttatacgatttttgagggacaaaatg-ctattttggta 18386554  T
Q  190 tttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttt 258  Q
    ||| ||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  18386555 ttttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttt 18386623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 93 - 262
Target Start/End: Complemental strand, 32873931 - 32873762
Alignment:
Q  93 tacatcacaagacaaaacaatacaagacaaactttt-atagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatt 191  Q
    |||| |||||| || ||||| ||| |||||| |||| || |||||||||||||||| || ||||||||||||||  ||||       ||||||| |||||    
T  32873931 tacaacacaaggcagaacaacacatgacaaattttttatggcattgagtaattttttgttttatacgatttttgagggacaaaatg-ctattttggtatt 32873833  T
Q  192 taagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    | ||| |||||||||||| |||||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  32873832 tcagacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgaaggacaaaaatatgagtttttgtc 32873762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 93 - 262
Target Start/End: Complemental strand, 43158848 - 43158679
Alignment:
Q  93 tacatcacaagacaaaacaatacaagacaaactttt-atagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatt 191  Q
    |||| ||||||||| |||| |||| |||||| |||| || |||||||||||||||| || ||||||||||||||  ||||       |||||||  | ||    
T  43158848 tacaacacaagacagaacagtacaggacaaattttttatggcattgagtaattttttgttttatacgatttttgagggacaaaatg-ctattttgatgtt 43158750  T
Q  192 taagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    | ||| ||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  43158749 ttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggtaagggacaaaaatatgagtttttgtc 43158679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 125 - 262
Target Start/End: Complemental strand, 26371938 - 26371802
Alignment:
Q  125 ttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaaagttgtg 224  Q
    |||||| ||||||| |||||||| || ||||||||||||||  ||||       ||||||| |||||| ||| |||||||||||||||||||||||||||    
T  26371938 ttttatggcattgaataattttttgttttatacgatttttgagggacaaaatg-ctattttagtattttagacaacttgtacgtgggacaaaaagttgtg 26371840  T
Q  225 atgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
     |||| ||||||||||||||||||||||||||||||||    
T  26371839 ctgtgatttggtgagggacaaaaatatgagtttttgtc 26371802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 125 - 262
Target Start/End: Complemental strand, 26994354 - 26994218
Alignment:
Q  125 ttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaaagttgtg 224  Q
    |||||| |||||||||||||||| || |||||||||||||   ||||       ||||||| |||||| ||| |||||||||||||||||||||||||||    
T  26994354 ttttatggcattgagtaattttttgttttatacgattttttagggacaaaatg-ctattttggtattttagacaacttgtacgtgggacaaaaagttgtg 26994256  T
Q  225 atgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
     ||||||||||||||||||||||||||||| |||||||    
T  26994255 ctgtggtttggtgagggacaaaaatatgagattttgtc 26994218  T

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Target: chr7; HSP #17
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 125 - 261
Target Start/End: Original strand, 44748661 - 44748796
Alignment:
Q  125 ttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaaagttgtg 224  Q
    |||||| ||| |||||||||||| || ||||||||||||||| ||||       ||||||| |||||| ||| ||||||||||||||||||||||||||     
T  44748661 ttttatggcaatgagtaattttttgttttatacgatttttgggggacaaaatg-ctattttggtattttagacaacttgtacgtgggacaaaaagttgta 44748759  T
Q  225 atgtggtttggtgagggacaaaaatatgagtttttgt 261  Q
     |||||||||||||||||||||||| |||||||||||    
T  44748760 ttgtggtttggtgagggacaaaaatttgagtttttgt 44748796  T

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Target: chr7; HSP #18
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 93 - 262
Target Start/End: Complemental strand, 30849408 - 30849239
Alignment:
Q  93 tacatcacaagacaaaacaatacaagacaaactttt-atagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatt 191  Q
    |||| ||||||||| ||||| ||| |||||  |||| || |||||||||||||||| || ||||||||||||||| ||||        |||||| |||||    
T  30849408 tacaacacaagacagaacaacacaggacaatttttttatggcattgagtaattttttgttttatacgatttttgggggacaaaatgt-tattttggtatt 30849310  T
Q  192 taagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    | | | ||||||||  ||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  30849309 ttatacaacttgtatatgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtc 30849239  T

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Target: chr7; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 188 - 262
Target Start/End: Original strand, 1870163 - 1870237
Alignment:
Q  188 tatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    ||||| ||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  1870163 tattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtc 1870237  T

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Target: chr7; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 114 - 262
Target Start/End: Complemental strand, 34295544 - 34295397
Alignment:
Q  114 acaagacaaacttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggac 213  Q
    |||||||||| ||||||  |||||| |||||||| || ||||| ||||||||| ||||       |||||||  ||||| ||| ||||||||||||||||    
T  34295544 acaagacaaatttttatgacattgaataattttttgttttatatgatttttgggggacaaaatg-ctattttgatattttagacaacttgtacgtgggac 34295446  T
Q  214 aaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    ||||||||||| ||||||||| |||||||||||||||| ||||||||||    
T  34295445 aaaaagttgtgctgtggtttgctgagggacaaaaatatcagtttttgtc 34295397  T

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Target: chr7; HSP #21
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 125 - 262
Target Start/End: Original strand, 18470650 - 18470786
Alignment:
Q  125 ttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaaagttgtg 224  Q
    |||||| |||||||||||||||| || ||||| ||||||||  ||||        |||||| |||||| ||| |||||||||||||||||||||||| ||    
T  18470650 ttttatggcattgagtaattttttgttttatatgatttttgagggacaaaatgt-tattttggtattttagacaacttgtacgtgggacaaaaagttatg 18470748  T
Q  225 atgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
     |||||||||||||| ||||||||||||||||||||||    
T  18470749 ctgtggtttggtgagagacaaaaatatgagtttttgtc 18470786  T

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Target: chr7; HSP #22
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 125 - 262
Target Start/End: Complemental strand, 43189372 - 43189235
Alignment:
Q  125 ttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaaagttgtg 224  Q
    |||||| |||||||||||||| | || | ||||||||||||| ||         ||||||| |||||  ||| ||||||||||||||| |||||||||||    
T  43189372 ttttatggcattgagtaatttgttgtttcatacgatttttggggggacaaaatactattttggtattctagacaacttgtacgtgggataaaaagttgtg 43189273  T
Q  225 atgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
     |||||||||||||||||||||||||||||||||||||    
T  43189272 ttgtggtttggtgagggacaaaaatatgagtttttgtc 43189235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 109 - 262
Target Start/End: Complemental strand, 47316844 - 47316691
Alignment:
Q  109 acaatacaagacaaactttt-atagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacg 207  Q
    |||| |||||||||| |||| || |||||||||||||||| || ||||||||||||||  ||||       ||||||| ||| || ||| |||||| | |    
T  47316844 acaacacaagacaaattttttatggcattgagtaattttttgttttatacgatttttgagggacaaaatg-ctattttggtaatttagacaacttgcatg 47316746  T
Q  208 tgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    || |||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  47316745 tgagacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtc 47316691  T

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Target: chr7; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 118 - 259
Target Start/End: Original strand, 26652825 - 26652965
Alignment:
Q  118 gacaaacttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaa 217  Q
    |||||| ||||||  |||||| |||||||| || ||||||||||||||| ||||       |||||||  ||||| ||| ||||||||||||||||||||    
T  26652825 gacaaatttttatgacattgaataattttttgttttatacgatttttggcggacaaaatg-ctattttgatattttagacaacttgtacgtgggacaaaa 26652923  T
Q  218 agttgtgatgtggtttggtgagggacaaaaatatgagttttt 259  Q
    ||||||| ||||||||| |||||||||||||||| |||||||    
T  26652924 agttgtgctgtggtttgctgagggacaaaaatatcagttttt 26652965  T

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Target: chr7; HSP #25
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 98 - 262
Target Start/End: Original strand, 329409 - 329572
Alignment:
Q  98 cacaagacaaaacaatacaagacaaacttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagat 197  Q
    |||||| || |||| |||| |||||| |||||| | ||||| |||||| | || ||||| ||||||||| ||||       ||||||| || ||| ||      
T  329409 cacaaggcataacagtacatgacaaatttttatggtattgaataatttcttgttttatatgatttttgggggacaaaatg-ctattttggtgttttaggc 329507  T
Q  198 aacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||    
T  329508 aacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatttcagtttttgtc 329572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 118 - 261
Target Start/End: Complemental strand, 23349427 - 23349285
Alignment:
Q  118 gacaaacttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaa 217  Q
    |||||| ||||||| |||||| |||||||| || || ||||||| |||| ||||       | ||||| |||||| ||| |||||||| |||||||||||    
T  23349427 gacaaatttttataacattgaataattttttgttttctacgattgttgggggacgaaatgtc-attttagtattttagacaacttgtatgtgggacaaaa 23349329  T
Q  218 agttgtgatgtggtttggtgagggacaaaaatatgagtttttgt 261  Q
    ||||||| |||||||||||||||||||||||||| |||||||||    
T  23349328 agttgtgttgtggtttggtgagggacaaaaatatcagtttttgt 23349285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 179 - 262
Target Start/End: Complemental strand, 41665651 - 41665568
Alignment:
Q  179 ctatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    |||||||||||||| ||| |||||||||||| ||||||||||||||||||||||||| |||||||||||||   ||||||||||    
T  41665651 ctatttttgtattttagacaacttgtacgtgagacaaaaagttgtgatgtggtttggcgagggacaaaaattgcagtttttgtc 41665568  T

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Target: chr7; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 108 - 262
Target Start/End: Original strand, 1363586 - 1363738
Alignment:
Q  108 aacaatacaagacaaacttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacg 207  Q
    ||||| ||| |||||| |||||| ||||||| |||||||| || |||||| |||||||| | ||       ||||||||||||||  || ||| ||||||    
T  1363586 aacaacacatgacaaatttttatggcattgaataattttttgttttatacaatttttgg-gtacgaaatg-ctatttttgtatttttgacaacctgtacg 1363683  T
Q  208 tgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    || |||||||||||||||||||||||| |||||||||||||||| || |||||||    
T  1363684 tgagacaaaaagttgtgatgtggtttgatgagggacaaaaatatcagcttttgtc 1363738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 125 - 262
Target Start/End: Complemental strand, 3892155 - 3892019
Alignment:
Q  125 ttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaaagttgtg 224  Q
    |||||| |||||||||||||||| || ||| ||||||||||  |||        ||||||| |||||  ||| ||||||||||| |||||||||||||||    
T  3892155 ttttatggcattgagtaattttttgttttacacgatttttga-ggaacaaaatgctattttggtattctagacaacttgtacgtaggacaaaaagttgtg 3892057  T
Q  225 atgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
     |||| ||||||||| ||||||||||||||||||||||    
T  3892056 ctgtgatttggtgagagacaaaaatatgagtttttgtc 3892019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 179 - 262
Target Start/End: Original strand, 34519527 - 34519610
Alignment:
Q  179 ctatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    |||||||||||||| ||| ||||||||| ||||||||||||||||| |||||||||| |||||||||||||   ||||||||||    
T  34519527 ctatttttgtattttagacaacttgtacctgggacaaaaagttgtgttgtggtttggcgagggacaaaaattgcagtttttgtc 34519610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 179 - 258
Target Start/End: Original strand, 46408908 - 46408987
Alignment:
Q  179 ctatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttt 258  Q
    |||||||  ||||| ||| |||||||| || ||||||||||||||| |||||||||||||||||||||||||||||||||    
T  46408908 ctattttgatattttagacaacttgtatgtcggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttt 46408987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 179 - 249
Target Start/End: Complemental strand, 22724607 - 22724537
Alignment:
Q  179 ctatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaat 249  Q
    |||||||||||||| ||| ||||||||||||||||| ||||||| | ||||||||||||||||||||||||    
T  22724607 ctatttttgtattttagacaacttgtacgtgggacataaagttgcgctgtggtttggtgagggacaaaaat 22724537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 180 - 262
Target Start/End: Complemental strand, 30599083 - 30599001
Alignment:
Q  180 tatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    |||||| |||||| |||||| |||||| || |||||||||||||| ||||||||| ||||||||||||||||||| |||||||    
T  30599083 tattttggtattttagataatttgtacttgagacaaaaagttgtgttgtggtttgatgagggacaaaaatatgagcttttgtc 30599001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 114 - 262
Target Start/End: Original strand, 48699353 - 48699500
Alignment:
Q  114 acaagacaaacttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggac 213  Q
    ||||||||| ||||||| | ||||| | | |||||||||| |||||||||| ||||||       ||||||| |||||| ||| ||||||||||||| ||    
T  48699353 acaagacaagcttttatggtattgaatgacttttggtcttgtacgattttttgtggacataagt-ctattttggtattttagacaacttgtacgtggaac 48699451  T
Q  214 aaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    ||| ||||||| |||||||| ||||||||||| ||| | ||||||||||    
T  48699452 aaatagttgtgttgtggtttagtgagggacaagaatttcagtttttgtc 48699500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 201 - 262
Target Start/End: Original strand, 48894758 - 48894819
Alignment:
Q  201 ttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    ||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||||||||    
T  48894758 ttgtacgtgggacaaaaagttgtgatgtggtttagtgaatgacaaaaatatgagtttttgtc 48894819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 118 - 247
Target Start/End: Original strand, 9913484 - 9913612
Alignment:
Q  118 gacaaacttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaa 217  Q
    |||||| |||||| | ||||| |||||||| || ||||||||||||||| ||||        |||||| |||||| ||| ||| ||||||||||| ||||    
T  9913484 gacaaatttttatggaattgaataatttttagttttatacgatttttgggggacgaaatgt-tattttggtattttagacaacctgtacgtgggaaaaaa 9913582  T
Q  218 agttgtgatgtggtttggtgagggacaaaa 247  Q
    |||||||||||||||||||||| |||||||    
T  9913583 agttgtgatgtggtttggtgagcgacaaaa 9913612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 118 - 247
Target Start/End: Original strand, 9927172 - 9927300
Alignment:
Q  118 gacaaacttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaa 217  Q
    |||||| |||||| | ||||| |||||||| || ||||||||||||||| ||||        |||||| |||||| ||| ||| ||||||||||| ||||    
T  9927172 gacaaatttttatggaattgaataatttttagttttatacgatttttgggggacgaaatgt-tattttggtattttagacaacctgtacgtgggaaaaaa 9927270  T
Q  218 agttgtgatgtggtttggtgagggacaaaa 247  Q
    |||||||||||||||||||||| |||||||    
T  9927271 agttgtgatgtggtttggtgagcgacaaaa 9927300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 198 - 262
Target Start/End: Original strand, 16963176 - 16963240
Alignment:
Q  198 aacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    ||||||||||||||||||||||||||  ||||||||| | |||||||||||||||||||||||||    
T  16963176 aacttgtacgtgggacaaaaagttgtattgtggtttgataagggacaaaaatatgagtttttgtc 16963240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 179 - 262
Target Start/End: Original strand, 43368220 - 43368303
Alignment:
Q  179 ctatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    |||||||  ||||| ||| ||||||||||| ||||||||||||||| ||||||||| ||||| |||||||||| ||||||||||    
T  43368220 ctattttgatattttagacaacttgtacgtaggacaaaaagttgtgctgtggtttgctgaggcacaaaaatatcagtttttgtc 43368303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 208 - 262
Target Start/End: Original strand, 11250665 - 11250719
Alignment:
Q  208 tgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  11250665 tgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgattttttgtc 11250719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 179 - 249
Target Start/End: Complemental strand, 26910486 - 26910416
Alignment:
Q  179 ctatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaat 249  Q
    ||||||||||||||  || |||||||||||| |||||||||||||| |||||||||| |||||||||||||    
T  26910486 ctatttttgtatttttgacaacttgtacgtgtgacaaaaagttgtgttgtggtttggcgagggacaaaaat 26910416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 188 - 262
Target Start/End: Original strand, 38301371 - 38301444
Alignment:
Q  188 tatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    ||||| ||| ||||||| ||||||||||||||||||| ||||||||| |||||||||||||||| ||||||||||    
T  38301371 tattttagacaacttgt-cgtgggacaaaaagttgtgttgtggtttgctgagggacaaaaatatcagtttttgtc 38301444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 205 - 262
Target Start/End: Original strand, 11822268 - 11822325
Alignment:
Q  205 acgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    |||||||||||||||||||| |||||||| |||| |||||||||||||||||||||||    
T  11822268 acgtgggacaaaaagttgtgttgtggtttagtgaaggacaaaaatatgagtttttgtc 11822325  T

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Target: chr7; HSP #44
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 201 - 262
Target Start/End: Original strand, 20127330 - 20127391
Alignment:
Q  201 ttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    |||||||||||||||||||||||||||||||||| ||||| |||||||||| || |||||||    
T  20127330 ttgtacgtgggacaaaaagttgtgatgtggtttgctgaggaacaaaaatatcagcttttgtc 20127391  T

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Target: chr7; HSP #45
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 108 - 262
Target Start/End: Complemental strand, 29372925 - 29372772
Alignment:
Q  108 aacaatacaagacaaacttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacg 207  Q
    ||||||||||||||||||||||| | ||| | ||||||||||||||||| |||||||||||||         || |||   |||| ||| |||||||||     
T  29372925 aacaatacaagacaaacttttatggtattaaataatttttggtcttatatgatttttggtgga-taaaaggttaatttgaaattttagacaacttgtaca 29372827  T
Q  208 tgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    ||| ||| ||||||||| |||||||| |||| |||||||||| | ||||||||||    
T  29372826 tggaacagaaagttgtgttgtggtttagtgacggacaaaaattttagtttttgtc 29372772  T

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Target: chr7; HSP #46
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 194 - 262
Target Start/End: Original strand, 17237110 - 17237178
Alignment:
Q  194 agataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    |||||| ||||||||| |||||||||||||| |||||||| ||||  ||||||||||||||||||||||    
T  17237110 agataatttgtacgtgagacaaaaagttgtgttgtggtttagtgaatgacaaaaatatgagtttttgtc 17237178  T

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Target: chr7; HSP #47
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 194 - 262
Target Start/End: Original strand, 37967008 - 37967076
Alignment:
Q  194 agataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    ||||||||||||||||| |||||||||||||||||||| | ||||  |||||||||||| |||||||||    
T  37967008 agataacttgtacgtggaacaaaaagttgtgatgtggtctagtgaaagacaaaaatatgggtttttgtc 37967076  T

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Target: chr7; HSP #48
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 179 - 251
Target Start/End: Complemental strand, 43214001 - 43213929
Alignment:
Q  179 ctatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatat 251  Q
    ||||||| ||||||  || |||||||| |||||||||||||||||| ||||||||||||| ||||||||||||    
T  43214001 ctattttggtatttttgacaacttgtatgtgggacaaaaagttgtgttgtggtttggtgaaggacaaaaatat 43213929  T

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Target: chr7; HSP #49
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 194 - 259
Target Start/End: Complemental strand, 46448705 - 46448640
Alignment:
Q  194 agataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagttttt 259  Q
    |||||| || ||| ||||||||||||||||| |||||||| |||| ||||||||||||||||||||    
T  46448705 agataatttatacatgggacaaaaagttgtgctgtggtttagtgacggacaaaaatatgagttttt 46448640  T

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Target: chr7; HSP #50
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 125 - 224
Target Start/End: Original strand, 47947726 - 47947824
Alignment:
Q  125 ttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaaagttgtg 224  Q
    |||||| |||||||||||||||| || ||||||||||||||  ||||       ||||||| |||||| ||| |||||||||||||||||||||||||||    
T  47947726 ttttatggcattgagtaattttttgttttatacgatttttgagggacaaaatg-ctattttggtattttagacaacttgtacgtgggacaaaaagttgtg 47947824  T

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Target: chr7; HSP #51
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 179 - 262
Target Start/End: Original strand, 21133391 - 21133474
Alignment:
Q  179 ctatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    ||||||| |||||| ||| || ||||| ||| |||||||||||||||||||||||  ||||||| || ||||| ||||||||||    
T  21133391 ctattttggtattttagacaatttgtatgtgagacaaaaagttgtgatgtggtttattgagggaaaataatatcagtttttgtc 21133474  T

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Target: chr7; HSP #52
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 246
Target Start/End: Complemental strand, 21408776 - 21408635
Alignment:
Q  98 cacaagacaaaacaatacaagacaaacttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagat 197  Q
    |||||||||||||||||||  |||||  ||||||   |||| ||||||||  ||||||||||||||| ||||||       |||||||||||||| ||||    
T  21408776 cacaagacaaaacaatacataacaaa--tttata---ttgaataattttttatcttatacgatttttagtggacgaaaa--ctatttttgtattttagat 21408684  T
Q  198 aacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaa 246  Q
    ||||||||| ||  | |||||||| || ||||||||  |||||||||||    
T  21408683 aacttgtacatgaaataaaaagttatgttgtggtttaatgagggacaaa 21408635  T

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Target: chr7; HSP #53
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 181 - 262
Target Start/End: Original strand, 22631759 - 22631840
Alignment:
Q  181 atttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    ||||| |||||| ||| |||||||||||   |||||||||| || ||||||||||||| |||||||||||| |||| |||||    
T  22631759 attttggtattttagacaacttgtacgtataacaaaaagttatgttgtggtttggtgaaggacaaaaatatcagttattgtc 22631840  T

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Target: chr7; HSP #54
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 135 - 221
Target Start/End: Complemental strand, 29992813 - 29992729
Alignment:
Q  135 ttgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaaagtt 221  Q
    |||| ||||||||||||||||||||||||||||||||        |  |||||||||| |||||||||||||||| |||||||||||    
T  29992813 ttgaataatttttggtcttatacgatttttggtggacaaaaaa--ttattttgtattttagataacttgtacgtgagacaaaaagtt 29992729  T

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Target: chr7; HSP #55
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 179 - 246
Target Start/End: Complemental strand, 22724108 - 22724041
Alignment:
Q  179 ctatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaa 246  Q
    |||||||||||||| | | ||||||||||||||| ||||||||| | |||||||||| || |||||||    
T  22724108 ctatttttgtattttatacaacttgtacgtgggataaaaagttgcgttgtggtttggcgatggacaaa 22724041  T

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Target: chr7; HSP #56
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 179 - 249
Target Start/End: Original strand, 2048970 - 2049040
Alignment:
Q  179 ctatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaat 249  Q
    ||||||||||||||   ||||||| |||||||||||||| ||| || |||||||| |||| ||||||||||    
T  2048970 ctatttttgtattttttataacttctacgtgggacaaaatgttttgttgtggtttagtgatggacaaaaat 2049040  T

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Target: chr7; HSP #57
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 188 - 238
Target Start/End: Original strand, 42332087 - 42332137
Alignment:
Q  188 tatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtga 238  Q
    ||||||||| || ||||| ||| ||||||||||||||||||||||||||||    
T  42332087 tatttaagacaatttgtatgtgagacaaaaagttgtgatgtggtttggtga 42332137  T

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Target: chr7; HSP #58
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 98 - 262
Target Start/End: Original strand, 48445460 - 48445623
Alignment:
Q  98 cacaagacaaaacaatacaagacaaacttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagat 197  Q
    |||||| || ||||| ||| |||||| |||||| | ||||| |||||| | || ||||| ||||||||| ||||        |||||| || ||| |||     
T  48445460 cacaaggcataacaacacatgacaaatttttatggtattgaataatttcttgttttatatgatttttgggggacaaaatgt-tattttcgtgttttagac 48445558  T
Q  198 aacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    |||||||| | | |||||||||||||  |||| |||||||| |||||||||| | ||||||||||    
T  48445559 aacttgtatgcgagacaaaaagttgtcctgtgatttggtgaaggacaaaaatttcagtttttgtc 48445623  T

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Target: chr7; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 163
Target Start/End: Complemental strand, 29455995 - 29455937
Alignment:
Q  105 caaaacaatacaagacaaacttttatagcattgagtaatttttggtcttatacgatttt 163  Q
    |||||||| ||| ||||||||||||| | ||||| |||| |||||||||||| ||||||    
T  29455995 caaaacaacacatgacaaacttttatggtattgaataatatttggtcttatatgatttt 29455937  T

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Target: chr7; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 249
Target Start/End: Original strand, 46627189 - 46627259
Alignment:
Q  179 ctatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaat 249  Q
    |||||||||||||| ||| ||   ||||||| |||||||| ||||| ||||||||| ||||||| ||||||    
T  46627189 ctatttttgtattttagacaatccgtacgtgagacaaaaaattgtgctgtggtttgatgagggataaaaat 46627259  T

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Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 179 - 243
Target Start/End: Original strand, 35645466 - 35645530
Alignment:
Q  179 ctatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggac 243  Q
    |||||||  ||||| ||| |||||||||||  || ||||||||||| |||||||| |||||||||    
T  35645466 ctattttattattttagacaacttgtacgtacgataaaaagttgtgttgtggtttagtgagggac 35645530  T

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Target: chr8 (Bit Score: 84; Significance: 5e-40; HSPs: 54)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 98 - 262
Target Start/End: Complemental strand, 29672494 - 29672330
Alignment:
Q  98 cacaagacaaaacaatacaagacaaactttt-atagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaaga 196  Q
    ||||||||| ||||| ||| |||||| |||| || |||||||||||||||| || ||||||||||||||  ||||       ||||||| |||||| |||    
T  29672494 cacaagacagaacaacacaggacaaatttttcatggcattgagtaattttttgttttatacgatttttgagggacaaaatg-ctattttggtattttaga 29672396  T
Q  197 taacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  29672395 taacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtc 29672330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 125 - 262
Target Start/End: Complemental strand, 29563369 - 29563233
Alignment:
Q  125 ttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaaagttgtg 224  Q
    |||||| |||||||||||||||| || ||||||||||||||  ||||       ||||||| |||||| ||| |||||||||||||||||||||||||||    
T  29563369 ttttatggcattgagtaattttttgttttatacgatttttgagggacaaaata-ctattttggtattttagacaacttgtacgtgggacaaaaagttgtg 29563271  T
Q  225 atgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
     |||||||||||||||||||||||||||||||||||||    
T  29563270 ttgtggtttggtgagggacaaaaatatgagtttttgtc 29563233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 125 - 262
Target Start/End: Original strand, 41709739 - 41709875
Alignment:
Q  125 ttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaaagttgtg 224  Q
    |||||| |||||||||||||||| || ||||||||||||||  ||||       ||||||| |||||| ||||||||||||||| |||||||||||||||    
T  41709739 ttttatggcattgagtaattttttgttttatacgatttttgagggacaaaatg-ctattttggtattttagataacttgtacgttggacaaaaagttgtg 41709837  T
Q  225 atgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
     |||||||||||||||||||||||||||||||||||||    
T  41709838 ctgtggtttggtgagggacaaaaatatgagtttttgtc 41709875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 93 - 262
Target Start/End: Complemental strand, 8673231 - 8673062
Alignment:
Q  93 tacatcacaagacaaaacaatacaagacaaactttt-atagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatt 191  Q
    |||| |||||| |||||||  ||| |||||| |||| || |||||||||||||||| || ||||| ||||||||  ||||       ||||||| |||||    
T  8673231 tacaacacaaggcaaaacagcacaggacaaaatttttatggcattgagtaattttttgttttatatgatttttgagggacaaaatg-ctattttggtatt 8673133  T
Q  192 taagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    | ||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  8673132 ttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtc 8673062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 125 - 262
Target Start/End: Original strand, 6386538 - 6386674
Alignment:
Q  125 ttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaaagttgtg 224  Q
    |||||| |||||||||||||||| || ||||||||||||||  ||||       ||||||| |||||| ||| |||||||||||| ||||||||||||||    
T  6386538 ttttatggcattgagtaattttttgttttatacgatttttgagggacaaaatg-ctattttggtattttagacaacttgtacgtgagacaaaaagttgtg 6386636  T
Q  225 atgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
     |||||||||||||||||||||||||||||||||||||    
T  6386637 ttgtggtttggtgagggacaaaaatatgagtttttgtc 6386674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 91 - 262
Target Start/End: Complemental strand, 12753503 - 12753332
Alignment:
Q  91 aatacatcacaagacaaaacaatacaagacaaac-ttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgta 189  Q
    |||||| ||||||||| ||||| ||| ||||||  |||||| |||||||||||||| | || ||||||||||||||| ||||        |||||| |||    
T  12753503 aatacaacacaagacagaacaacacatgacaaaaattttatggcattgagtaatttgttgttttatacgatttttgggggacaaaatgt-tattttggta 12753405  T
Q  190 tttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    ||| ||| |||||||| |||||||||||||||||| ||||||||||||||| |||||||||||||||||||||    
T  12753404 ttttagacaacttgtatgtgggacaaaaagttgtgttgtggtttggtgaggaacaaaaatatgagtttttgtc 12753332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 125 - 262
Target Start/End: Complemental strand, 32303728 - 32303592
Alignment:
Q  125 ttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaaagttgtg 224  Q
    |||||| |||||||||||||||| || ||||| ||||||||  ||||       ||||||| |||||| ||| |||||||||||||||||||||||||||    
T  32303728 ttttatggcattgagtaattttttgttttatatgatttttgagggacaaaatg-ctattttggtattttagacaacttgtacgtgggacaaaaagttgtg 32303630  T
Q  225 atgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
     |||||||||||||||||||||||||||||||||||||    
T  32303629 ttgtggtttggtgagggacaaaaatatgagtttttgtc 32303592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 179 - 262
Target Start/End: Complemental strand, 37664373 - 37664290
Alignment:
Q  179 ctatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    ||||||| |||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37664373 ctattttggtattttagacaacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 37664290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 93 - 262
Target Start/End: Complemental strand, 30543198 - 30543029
Alignment:
Q  93 tacatcacaagacaaaacaatacaagacaaac-ttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatt 191  Q
    |||| |||||| || ||||| ||| ||||||  |||||| |||||||||||||||  || ||||||||||||||| ||||        |||||| |||||    
T  30543198 tacaacacaaggcagaacaacacaggacaaatattttatggcattgagtaattttatgttttatacgatttttgggggacaaaatgt-tattttggtatt 30543100  T
Q  192 taagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    | ||| |||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||    
T  30543099 ttagacaacttgtacgtgggacgaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtc 30543029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 125 - 262
Target Start/End: Original strand, 4052444 - 4052578
Alignment:
Q  125 ttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaaagttgtg 224  Q
    |||||| |||||||||||||||  || ||||||||||||||  ||||       ||||||| |||||| ||| |||||||||||||||||||||||||||    
T  4052444 ttttatggcattgagtaatttt--gttttatacgatttttgagggacaaaatg-ctattttggtattttagacaacttgtacgtgggacaaaaagttgtg 4052540  T
Q  225 atgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
     |||||||||||||||||||||||||||||||||||||    
T  4052541 ctgtggtttggtgagggacaaaaatatgagtttttgtc 4052578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 93 - 262
Target Start/End: Complemental strand, 31513759 - 31513590
Alignment:
Q  93 tacatcacaagacaaaacaatacaagacaaactttt-atagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatt 191  Q
    |||| |||||| || ||||| ||| |||||| |||| || |||||||||||||||| || ||||||||||||||  ||||       ||||||| |||||    
T  31513759 tacaacacaaggcagaacaacacatgacaaattttttatggcattgagtaattttttgttttatacgatttttgaaggacaaaatg-ctattttggtatt 31513661  T
Q  192 taagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    | ||| ||||||||| | ||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  31513660 ttagacaacttgtacctaggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttttgtc 31513590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 125 - 259
Target Start/End: Original strand, 45446417 - 45446550
Alignment:
Q  125 ttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaaagttgtg 224  Q
    |||||| |||||||||||||||| || ||||||||||||||  ||||       ||||||| |||||| ||| |||||||||||||||||||||||||||    
T  45446417 ttttatggcattgagtaattttttgttttatacgatttttgagggacaaaatg-ctattttggtattttagacaacttgtacgtgggacaaaaagttgtg 45446515  T
Q  225 atgtggtttggtgagggacaaaaatatgagttttt 259  Q
     ||||||||||||||| ||||||||||||||||||    
T  45446516 ctgtggtttggtgaggaacaaaaatatgagttttt 45446550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 93 - 261
Target Start/End: Complemental strand, 13407111 - 13406943
Alignment:
Q  93 tacatcacaagacaaaacaatacaagacaaactttt-atagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatt 191  Q
    |||| |||||| || ||||| ||| |||||| |||| ||||||||||||||||||| || ||||||||||||||| | ||       ||||||| |||||    
T  13407111 tacaacacaaggcagaacaacacatgacaaattttttatagcattgagtaattttttgttttatacgatttttggggcacaaaatg-ctattttggtatt 13407013  T
Q  192 taagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgt 261  Q
    | ||| |||||||||||| |||||||| || || ||||||||||||||||||||||||||||||||||||    
T  13407012 ttagacaacttgtacgtgagacaaaaaattatgctgtggtttggtgagggacaaaaatatgagtttttgt 13406943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 179 - 262
Target Start/End: Original strand, 21272699 - 21272782
Alignment:
Q  179 ctatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    ||||||| |||||| ||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  21272699 ctattttagtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttttgtc 21272782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 125 - 262
Target Start/End: Complemental strand, 32020144 - 32020008
Alignment:
Q  125 ttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaaagttgtg 224  Q
    |||||| |||||||||||||||| || ||||||||||||||  ||||       ||||||| |||||| ||| ||||||||||||| |||||||||||||    
T  32020144 ttttatggcattgagtaattttttgttttatacgatttttgagggacaaaata-ctattttggtattttagacaacttgtacgtggaacaaaaagttgtg 32020046  T
Q  225 atgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
     ||||||||||||||||| |||||||||||||||||||    
T  32020045 ctgtggtttggtgagggataaaaatatgagtttttgtc 32020008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 125 - 262
Target Start/End: Original strand, 34063090 - 34063226
Alignment:
Q  125 ttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaaagttgtg 224  Q
    |||||| ||||||| |||||||| || ||||||||||||||  ||||       ||||||| |||||| ||| |||||||||||||||||||||||||||    
T  34063090 ttttatggcattgaataattttttgttttatacgatttttgagggacaaaatg-ctattttggtattttagacaacttgtacgtgggacaaaaagttgtg 34063188  T
Q  225 atgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
     |||||||||| ||||||||||||||||||||||||||    
T  34063189 ctgtggtttggcgagggacaaaaatatgagtttttgtc 34063226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 125 - 261
Target Start/End: Complemental strand, 3251799 - 3251664
Alignment:
Q  125 ttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaaagttgtg 224  Q
    |||||| |||||||||||||||| || ||||||||||||||  ||||        |||||| |||||| ||| ||||||||||| ||| |||||||||||    
T  3251799 ttttatggcattgagtaattttttgttttatacgatttttgagggacaaaatgt-tattttggtattttagacaacttgtacgtaggataaaaagttgtg 3251701  T
Q  225 atgtggtttggtgagggacaaaaatatgagtttttgt 261  Q
    ||||||||||||||||||||||||||| |||||||||    
T  3251700 atgtggtttggtgagggacaaaaatataagtttttgt 3251664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 125 - 262
Target Start/End: Original strand, 27103921 - 27104057
Alignment:
Q  125 ttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaaagttgtg 224  Q
    |||||| |||||||||||||||| || ||||| ||||||||  ||||       |||||||  ||||| ||| |||||||||||||||||||||||||||    
T  27103921 ttttatggcattgagtaattttttgttttatatgatttttgagggacaaaatg-ctattttgatattttagacaacttgtacgtgggacaaaaagttgtg 27104019  T
Q  225 atgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
      ||||||||||||||||||||||||||||||||||||    
T  27104020 cagtggtttggtgagggacaaaaatatgagtttttgtc 27104057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 125 - 262
Target Start/End: Original strand, 31732026 - 31732162
Alignment:
Q  125 ttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaaagttgtg 224  Q
    |||||| |||||||||||||||| || ||||||||||||||  ||||       ||||||| |||||| ||| |||||||| ||| |||||||||||||     
T  31732026 ttttatggcattgagtaattttttgttttatacgatttttgagggacaaaatg-ctattttggtattttagacaacttgtatgtgagacaaaaagttgta 31732124  T
Q  225 atgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
     |||||||||||||||||||||||||||||||||||||    
T  31732125 ctgtggtttggtgagggacaaaaatatgagtttttgtc 31732162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 180 - 262
Target Start/End: Complemental strand, 14005133 - 14005051
Alignment:
Q  180 tatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    |||||| |||||| ||| ||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  14005133 tattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgatggacaaaaatatgagtttttgtc 14005051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 179 - 261
Target Start/End: Original strand, 15001481 - 15001563
Alignment:
Q  179 ctatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgt 261  Q
    ||||||| |||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | |||||||||    
T  15001481 ctattttggtattttagataacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatttcagtttttgt 15001563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 180 - 262
Target Start/End: Original strand, 30501161 - 30501243
Alignment:
Q  180 tatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    ||||||||||||| ||  ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  30501161 tatttttgtattttaggcaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgtgtttttgtc 30501243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 126 - 262
Target Start/End: Complemental strand, 37618534 - 37618399
Alignment:
Q  126 tttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaaagttgtga 225  Q
    ||||| ||||||| |||||||| || |||||| |||||||| ||||       ||||||| |||||||| | |||||||||||| ||||||||||||||     
T  37618534 tttatggcattgaataattttttgttttatacaatttttgggggacgaaatg-ctattttggtatttaaaacaacttgtacgtgagacaaaaagttgtgt 37618436  T
Q  226 tgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    |||||||||||||||||||||||||| ||||||||||    
T  37618435 tgtggtttggtgagggacaaaaatatcagtttttgtc 37618399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 120 - 247
Target Start/End: Complemental strand, 16595297 - 16595171
Alignment:
Q  120 caaacttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaaag 219  Q
    ||||||||| | | ||||| ||||||||||||||||||||||||||||| ||       |||||||||||||| ||||||||||||||||||||||||||    
T  16595297 caaacttttttggtattgaataatttttggtcttatacgatttttggtgaacaaaaag-ctatttttgtattttagataacttgtacgtgggacaaaaag 16595199  T
Q  220 ttgtgatgtggtttggtgagggacaaaa 247  Q
    ||||| ||||| || | |||||||||||    
T  16595198 ttgtgttgtggattagcgagggacaaaa 16595171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 125 - 262
Target Start/End: Complemental strand, 5969007 - 5968871
Alignment:
Q  125 ttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaaagttgtg 224  Q
    |||||| |||||||||||||||| || ||||||||||||||  ||||        |||||| |||||| ||| || |||||||||||| |||||||||||    
T  5969007 ttttatggcattgagtaattttttgttttatacgatttttgagggacaaaatgt-tattttggtattttagacaatttgtacgtgggataaaaagttgtg 5968909  T
Q  225 atgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
     ||||||||||||| |||||||||||||||||||||||    
T  5968908 ctgtggtttggtgaaggacaaaaatatgagtttttgtc 5968871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 180 - 262
Target Start/End: Complemental strand, 7394903 - 7394821
Alignment:
Q  180 tatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    |||||| |||||| ||| |||||||||||| |||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  7394903 tattttggtattttagacaacttgtacgtgagacaaaaagttgtgttatggtttggtgagggacaaaaatatgagtttttgtc 7394821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 125 - 261
Target Start/End: Original strand, 34101470 - 34101605
Alignment:
Q  125 ttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaaagttgtg 224  Q
    |||||| || ||||||||||||| || ||||||||||||||  ||||       ||||||| |||||| ||| ||||||||||||| | |||||||| ||    
T  34101470 ttttatggcgttgagtaattttttgttttatacgatttttgagggacaaaatg-ctattttggtattttagacaacttgtacgtggaaaaaaaagttatg 34101568  T
Q  225 atgtggtttggtgagggacaaaaatatgagtttttgt 261  Q
     ||||||||||||||||||||||||||||||||||||    
T  34101569 ttgtggtttggtgagggacaaaaatatgagtttttgt 34101605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 125 - 259
Target Start/End: Original strand, 25478205 - 25478338
Alignment:
Q  125 ttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaaagttgtg 224  Q
    |||||| |||||||||||||||| || |||||||||||||   ||||       ||||||| |||||| ||| ||||||||||| |||||||||||||||    
T  25478205 ttttatggcattgagtaattttttgttttatacgattttttagggacaaaata-ctattttggtattttagacaacttgtacgtaggacaaaaagttgtg 25478303  T
Q  225 atgtggtttggtgagggacaaaaatatgagttttt 259  Q
     |||| |||| ||||||||||||||||||||||||    
T  25478304 ctgtgatttgatgagggacaaaaatatgagttttt 25478338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 114 - 259
Target Start/End: Original strand, 39642834 - 39642978
Alignment:
Q  114 acaagacaaacttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggac 213  Q
    |||||||||| ||||||  |||||| |||||||| || |||||| |||||||| |||        ||||||| |||||| ||| ||| ||||||||||||    
T  39642834 acaagacaaatttttatgacattgaataattttttgttttatacaatttttggggga-tgaaatgctattttggtattttagacaacctgtacgtgggac 39642932  T
Q  214 aaaaagttgtgatgtggtttggtgagggacaaaaatatgagttttt 259  Q
    | ||||||||| |||||||||||||||||||||||||| |||||||    
T  39642933 agaaagttgtgttgtggtttggtgagggacaaaaatatcagttttt 39642978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 179 - 262
Target Start/End: Original strand, 37861874 - 37861957
Alignment:
Q  179 ctatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    ||||||| |||||| ||| ||||||||||| ||||||| |||| |||||||||||||||||||| |||||||||||||||||||    
T  37861874 ctattttggtattttagacaacttgtacgtaggacaaatagttatgatgtggtttggtgagggataaaaatatgagtttttgtc 37861957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 118 - 262
Target Start/End: Original strand, 10467019 - 10467162
Alignment:
Q  118 gacaaacttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaa 217  Q
    |||||| ||||||  ||| || |||||||| || ||||||||||||||| ||||       |||||||  ||||| ||| ||||||||||||||||||||    
T  10467019 gacaaatttttatgacatagaataattttttgttttatacgatttttgggggacaaaatg-ctattttgatattttagacaacttgtacgtgggacaaaa 10467117  T
Q  218 agttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    ||||||| ||||||||| ||||| |||||||||| ||||||||||    
T  10467118 agttgtgttgtggtttgctgaggaacaaaaatatcagtttttgtc 10467162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 98 - 262
Target Start/End: Original strand, 35225597 - 35225760
Alignment:
Q  98 cacaagacaaaacaatacaagacaaacttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagat 197  Q
    ||||||||| ||||| |||||||||| |||||| | ||||| ||||||   || ||||| |||||||||  |||       |||||||||||||| |||     
T  35225597 cacaagacagaacaacacaagacaaatttttatggtattgaataatttcctgttttatatgatttttgggtgacgaaatg-ctatttttgtattttagac 35225695  T
Q  198 aacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    ||||||||| || ||||||||||||||||||||||||| |||||||||||||   ||||||||||    
T  35225696 aacttgtacttgtgacaaaaagttgtgatgtggtttggcgagggacaaaaattgcagtttttgtc 35225760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 98 - 262
Target Start/End: Original strand, 40388975 - 40389138
Alignment:
Q  98 cacaagacaaaacaatacaagacaaacttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagat 197  Q
    |||||| || ||||| ||| || ||| |||||| ||||||| ||||||||  | ||||||||||||||| ||||       ||||||| | |||||| |     
T  40388975 cacaaggcagaacaacacaggaaaaaattttatggcattgaataattttttattttatacgatttttgggggacgaaatg-ctattttggcatttaaaac 40389073  T
Q  198 aacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    |||||||| |||||||||||||||||| |||||||||||||| || |||||||| ||||||||||    
T  40389074 aacttgtatgtgggacaaaaagttgtgctgtggtttggtgagagataaaaatatcagtttttgtc 40389138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 118 - 262
Target Start/End: Original strand, 41548573 - 41548716
Alignment:
Q  118 gacaaacttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaa 217  Q
    |||||| ||||||  |||||| |||||||| || ||||||||||||||| ||||        ||||||  ||||| ||| ||||||||||||||||||||    
T  41548573 gacaaatttttatgacattgaataattttttgttttatacgatttttgggggacaaaatgt-tattttgatattttagacaacttgtacgtgggacaaaa 41548671  T
Q  218 agttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    ||||||| |||||| || ||||| |||||||||| ||||||||||    
T  41548672 agttgtgttgtggtctgctgaggtacaaaaatatcagtttttgtc 41548716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 179 - 262
Target Start/End: Original strand, 45114070 - 45114153
Alignment:
Q  179 ctatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    ||||||| |||||| ||| ||||||||| |  |||||||||||||  |||||||||||||||||||||||||||||||||||||    
T  45114070 ctattttggtattttagacaacttgtacctatgacaaaaagttgtactgtggtttggtgagggacaaaaatatgagtttttgtc 45114153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 118 - 262
Target Start/End: Complemental strand, 7591597 - 7591454
Alignment:
Q  118 gacaaacttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaa 217  Q
    |||||| ||||||  |||||| |||||||| || ||||||||||||||| ||||       |||||||  ||||| ||| ||||| |||||| |||||||    
T  7591597 gacaaatttttatgacattgaataattttttgttttatacgatttttgggggacaaaatg-ctattttgatattttagacaacttatacgtgtgacaaaa 7591499  T
Q  218 agttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    ||||||| ||||||||| ||||| |||||||||| ||||||||||    
T  7591498 agttgtgttgtggtttgctgaggcacaaaaatatcagtttttgtc 7591454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 180 - 262
Target Start/End: Original strand, 17805707 - 17805789
Alignment:
Q  180 tatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    |||||| |||||| ||| |||||||||||| |||||| ||||||| | ||||||||||||| |||||||||||||||||||||    
T  17805707 tattttggtattttagacaacttgtacgtgagacaaagagttgtgctttggtttggtgaggaacaaaaatatgagtttttgtc 17805789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 179 - 262
Target Start/End: Complemental strand, 29611145 - 29611062
Alignment:
Q  179 ctatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    ||||||| || ||| ||| ||||| ||||||||||||||||||||| |||||||||| ||||||||||||| | ||||||||||    
T  29611145 ctattttggtgttttagacaacttttacgtgggacaaaaagttgtgttgtggtttggcgagggacaaaaatttcagtttttgtc 29611062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 179 - 249
Target Start/End: Complemental strand, 16485899 - 16485829
Alignment:
Q  179 ctatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaat 249  Q
    |||||||||||||| ||| ||||| ||||| ||||||||||||||| |||||||||| |||||||||||||    
T  16485899 ctatttttgtattttagaaaacttatacgtaggacaaaaagttgtgctgtggtttggcgagggacaaaaat 16485829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 198 - 260
Target Start/End: Original strand, 17520629 - 17520690
Alignment:
Q  198 aacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttg 260  Q
    |||||||| |||||||||||||||||| |||||||||||||||||| ||||||| ||||||||    
T  17520629 aacttgtatgtgggacaaaaagttgtgttgtggtttggtgagggac-aaaatataagtttttg 17520690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 119 - 262
Target Start/End: Original strand, 22999213 - 22999356
Alignment:
Q  119 acaaacttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaaa 218  Q
    ||||| ||||||  |||||| |||||||| || ||||||||||||||| ||||       |||||||  ||||| ||| || ||||||||||||||||||    
T  22999213 acaaatttttatgacattgaataattttttgttttatacgatttttggaggacaaaatg-ctattttgatattttagacaagttgtacgtgggacaaaaa 22999311  T
Q  219 -gttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
     ||| || | ||||||| |||||||||||||||| ||||||||||    
T  22999312 agttttgctatggtttgctgagggacaaaaatatcagtttttgtc 22999356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 179 - 247
Target Start/End: Original strand, 10932751 - 10932819
Alignment:
Q  179 ctatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaa 247  Q
    ||||||| |||||| ||| || |||||||||| || ||||||||||||||||||| |||||||||||||    
T  10932751 ctattttggtattttagacaaattgtacgtggaactaaaagttgtgatgtggtttagtgagggacaaaa 10932819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 183 - 262
Target Start/End: Original strand, 54189 - 54268
Alignment:
Q  183 ttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    ||||||||||  ||||||||||| ||||||||||||||||||||||||||| |  | |||||||||| |  |||||||||    
T  54189 ttttgtattttcgataacttgtatgtgggacaaaaagttgtgatgtggtttagcaaaggacaaaaatttatgtttttgtc 54268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 180 - 246
Target Start/End: Original strand, 6460277 - 6460344
Alignment:
Q  180 tatttttgtatttaagataacttgtacgtgggacaaaa-agttgtgatgtggtttggtgagggacaaa 246  Q
    |||||| |||||| ||| ||||| |||||||||||||| |||||||||||||||||||||| ||||||    
T  6460277 tattttggtattttagacaacttatacgtgggacaaaaaagttgtgatgtggtttggtgagagacaaa 6460344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 179 - 262
Target Start/End: Complemental strand, 22756501 - 22756418
Alignment:
Q  179 ctatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    |||||||||||||| ||||||||||||||||  ||||||||||||| |||||| |  ||||||| |||||| |  |||||||||    
T  22756501 ctatttttgtattttagataacttgtacgtgatacaaaaagttgtgttgtggtataatgagggataaaaatttatgtttttgtc 22756418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 179 - 248
Target Start/End: Complemental strand, 3801033 - 3800964
Alignment:
Q  179 ctatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaa 248  Q
    |||||||||||||| |||||||| ||| |||  ||||||||||||||||||||||  ||||| |||||||    
T  3801033 ctatttttgtattttagataactagtatgtgaaacaaaaagttgtgatgtggtttaatgaggaacaaaaa 3800964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 180 - 251
Target Start/End: Complemental strand, 27109630 - 27109559
Alignment:
Q  180 tatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatat 251  Q
    |||||| |||||| | | || ||||||| |||||||||||||||| ||||||||||| ||| ||||||||||    
T  27109630 tattttggtattttaaacaatttgtacgcgggacaaaaagttgtgttgtggtttggtaaggaacaaaaatat 27109559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 188 - 262
Target Start/End: Complemental strand, 10656767 - 10656693
Alignment:
Q  188 tatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    ||||| ||| || ||||||||| |||||||||||||| |||||||| |||| |||||||||  | ||||||||||    
T  10656767 tattttagacaatttgtacgtgagacaaaaagttgtgttgtggttttgtgaaggacaaaaaattcagtttttgtc 10656693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 223
Target Start/End: Complemental strand, 5859619 - 5859518
Alignment:
Q  121 aaacttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaaagt 220  Q
    |||||||||| | ||||| ||||| ||||||||||| |||||||  |||||       ||||||| |||||| |||||||||||||||  ||||||||||    
T  5859619 aaacttttattgtattgattaattattggtcttataagattttttatggacaaaata-ctattttagtattttagataacttgtacgtatgacaaaaagt 5859521  T
Q  221 tgt 223  Q
    |||    
T  5859520 tgt 5859518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 188 - 242
Target Start/End: Complemental strand, 10320358 - 10320304
Alignment:
Q  188 tatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgaggga 242  Q
    ||||| ||| |||||||||||| |  ||||||||||| |||||||||||||||||    
T  10320358 tattttagacaacttgtacgtgtggtaaaaagttgtgttgtggtttggtgaggga 10320304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 199 - 233
Target Start/End: Original strand, 14958993 - 14959027
Alignment:
Q  199 acttgtacgtgggacaaaaagttgtgatgtggttt 233  Q
    |||||||||||||||||||||||||| ||||||||    
T  14958993 acttgtacgtgggacaaaaagttgtgttgtggttt 14959027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 101 - 164
Target Start/End: Complemental strand, 18297534 - 18297469
Alignment:
Q  101 aagacaaaacaatacaaga-caaacttttatagcatt-gagtaatttttggtcttatacgattttt 164  Q
    |||| |||||||||||||| |||| |||||| | ||| || |||||||||||||||||||||||||    
T  18297534 aagataaaacaatacaagaacaaaattttatggtatttgaataatttttggtcttatacgattttt 18297469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 39 - 87
Target Start/End: Original strand, 35225587 - 35225635
Alignment:
Q  39 gacaaaacatcacaagacaaaacaacacaatacaaacttttatggtatt 87  Q
    ||||| ||| ||||||||| |||||||||| ||||| ||||||||||||    
T  35225587 gacaacacaacacaagacagaacaacacaagacaaatttttatggtatt 35225635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 226 - 262
Target Start/End: Original strand, 37474762 - 37474798
Alignment:
Q  226 tgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    ||||||||| |||||||||||||||| ||||||||||    
T  37474762 tgtggtttgctgagggacaaaaatataagtttttgtc 37474798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 81; Significance: 3e-38; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 125 - 262
Target Start/End: Original strand, 39788154 - 39788291
Alignment:
Q  125 ttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaaagttgtg 224  Q
    |||||| | |||||||||||||| || ||||||||||||||| ||||        |||||| |||||| ||| |||||||||||||||||||||||||||    
T  39788154 ttttatggtattgagtaattttttgttttatacgatttttgggggacaaaaatgttattttagtattttagacaacttgtacgtgggacaaaaagttgtg 39788253  T
Q  225 atgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    ||||||||||||||||||||||||||||||||||||||    
T  39788254 atgtggtttggtgagggacaaaaatatgagtttttgtc 39788291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 98 - 262
Target Start/End: Complemental strand, 4818302 - 4818138
Alignment:
Q  98 cacaagacaaaacaatacaagacaaactttt-atagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaaga 196  Q
    |||||| || ||||| |||||||||| |||| || |||||||||||||||| || |||||||||||||   ||||       ||||||| |||||| |||    
T  4818302 cacaaggcagaacaacacaagacaaattttttatggcattgagtaattttttgttttatacgattttttagggacaaaatg-ctattttggtattttaga 4818204  T
Q  197 taacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
     ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  4818203 caacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttttgtc 4818138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 125 - 262
Target Start/End: Complemental strand, 5571776 - 5571642
Alignment:
Q  125 ttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaaagttgtg 224  Q
    |||||| |||||||||||||||| || ||||||||||||||| ||||       ||||||| |||||| ||| ||||||||||| |||||||||||||||    
T  5571776 ttttatggcattgagtaattttttgttttatacgatttttgggggacaatg---ctattttggtattttagacaacttgtacgttggacaaaaagttgtg 5571680  T
Q  225 atgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
     |||||||||||||||||||||||||||| ||||||||    
T  5571679 ttgtggtttggtgagggacaaaaatatgaatttttgtc 5571642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 179 - 262
Target Start/End: Original strand, 7523187 - 7523270
Alignment:
Q  179 ctatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    ||||||| |||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7523187 ctattttggtattttagacaacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 7523270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 125 - 262
Target Start/End: Original strand, 32528677 - 32528813
Alignment:
Q  125 ttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaaagttgtg 224  Q
    |||||| ||||||| |||||||| || ||||||||||||||  ||||       ||||||| |||||| ||| |||||||||||||||||||||||||||    
T  32528677 ttttatggcattgaataattttttgttttatacgatttttgagggacaaaatg-ctattttggtattttagacaacttgtacgtgggacaaaaagttgtg 32528775  T
Q  225 atgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
     |||||||||||||||||||||||||||||||||||||    
T  32528776 ttgtggtttggtgagggacaaaaatatgagtttttgtc 32528813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 125 - 262
Target Start/End: Original strand, 2351642 - 2351778
Alignment:
Q  125 ttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaaagttgtg 224  Q
    |||||| |||||||||||||||| || || |||||||||||  ||||        |||||| |||||| ||| |||||||||||||||||||||||||||    
T  2351642 ttttatggcattgagtaattttttgttttgtacgatttttgagggacaaaatgt-tattttggtattttagacaacttgtacgtgggacaaaaagttgtg 2351740  T
Q  225 atgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
     |||||||||||||||||||||||||||||||||||||    
T  2351741 ctgtggtttggtgagggacaaaaatatgagtttttgtc 2351778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 125 - 262
Target Start/End: Complemental strand, 28090654 - 28090518
Alignment:
Q  125 ttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaaagttgtg 224  Q
    |||||||  |||||||||||||| || ||||||||||||||  ||||        ||||||||||||| ||| |||||||||||||||||||||||||||    
T  28090654 ttttatattattgagtaattttttgttttatacgatttttgagggacaaaatgt-tatttttgtattttagacaacttgtacgtgggacaaaaagttgtg 28090556  T
Q  225 atgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
     ||| |||||||||||||||||||||||||||||||||    
T  28090555 ttgtagtttggtgagggacaaaaatatgagtttttgtc 28090518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 125 - 262
Target Start/End: Original strand, 39918469 - 39918605
Alignment:
Q  125 ttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaaagttgtg 224  Q
    |||||||| |||||||||||||  || ||||||||||||||| ||||        |||||| |||||| ||| |||||||||||| ||||||||||||||    
T  39918469 ttttatagtattgagtaattttatgttttatacgatttttgggggacaaaatgt-tattttggtattttagacaacttgtacgtgagacaaaaagttgtg 39918567  T
Q  225 atgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
     |||||||||||||||||||||||||||||||||||||    
T  39918568 ctgtggtttggtgagggacaaaaatatgagtttttgtc 39918605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 179 - 262
Target Start/End: Complemental strand, 21739242 - 21739159
Alignment:
Q  179 ctatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    ||||||| |||||| ||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  21739242 ctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttttgtc 21739159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 125 - 262
Target Start/End: Complemental strand, 31770725 - 31770589
Alignment:
Q  125 ttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaaagttgtg 224  Q
    |||||| |||||||||||||||| || ||||| ||||||||  ||||       ||||||| |||||| ||| |||||||||||||||||||||||||||    
T  31770725 ttttatggcattgagtaattttttgttttatatgatttttgagggacaaaatg-ctattttggtatttcagacaacttgtacgtgggacaaaaagttgtg 31770627  T
Q  225 atgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
     ||||||||||||||||| |||||||||||||||||||    
T  31770626 ttgtggtttggtgagggataaaaatatgagtttttgtc 31770589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 179 - 262
Target Start/End: Original strand, 34794902 - 34794985
Alignment:
Q  179 ctatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    ||||||| |||||| ||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34794902 ctattttggtattttagacaacttatacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 34794985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 93 - 262
Target Start/End: Complemental strand, 41790629 - 41790460
Alignment:
Q  93 tacatcacaagacaaaacaatacaagacaaac-ttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatt 191  Q
    |||| |||||| || ||||| ||| ||||||  |||||| |||||||||||||||  || ||||||||||||||| ||||        |||||| |||||    
T  41790629 tacaacacaaggcagaacaacacatgacaaatattttatggcattgagtaattttatgttttatacgatttttgggggacaaaatgt-tattttagtatt 41790531  T
Q  192 taagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    | ||| || ||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  41790530 ttagacaatttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtc 41790460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 125 - 258
Target Start/End: Complemental strand, 7208364 - 7208232
Alignment:
Q  125 ttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaaagttgtg 224  Q
    |||||| |||||||||||||||| || ||||||||||||||  |||        ||||||| |||||| ||| |||||||||||| ||||||||||||||    
T  7208364 ttttatggcattgagtaattttttgttttatacgatttttga-ggaacaaaatgctattttggtattttagacaacttgtacgtgagacaaaaagttgtg 7208266  T
Q  225 atgtggtttggtgagggacaaaaatatgagtttt 258  Q
     |||||||||||||||||||||||||||||||||    
T  7208265 ctgtggtttggtgagggacaaaaatatgagtttt 7208232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 108 - 262
Target Start/End: Original strand, 31644391 - 31644544
Alignment:
Q  108 aacaatacaagacaaacttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacg 207  Q
    ||||| |||||||||| ||||||  |||||| |||||||  || ||||| ||||||| | ||||       ||||||| |||||| ||| ||||||||||    
T  31644391 aacaacacaagacaaatttttatgacattgaataattttatgttttatatgatttttaggggacaaaatg-ctattttggtattttagacaacttgtacg 31644489  T
Q  208 tgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  31644490 tgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtatttgtc 31644544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 93 - 262
Target Start/End: Complemental strand, 31880243 - 31880074
Alignment:
Q  93 tacatcacaagacaaaacaatacaagacaaactttt-atagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatt 191  Q
    |||| |||||| || |||| |||| |||||| |||| ||  |||||| |||||||| || |||||||||| |||| ||||       ||||||| |||||    
T  31880243 tacaacacaaggcagaacagtacatgacaaattttttatgacattgaataattttttgtattatacgattgttgggggacaaaatg-ctattttggtatt 31880145  T
Q  192 taagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    | ||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  31880144 ttagacaacttgtacgtaggacaaatagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 31880074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 118 - 262
Target Start/End: Original strand, 3735312 - 3735455
Alignment:
Q  118 gacaaacttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaa 217  Q
    |||||| ||||||  |||||| |||||||| || ||||||||||||||| ||||        |||||| |||||| ||| ||||||||||||||||||||    
T  3735312 gacaaatttttatgacattgaataattttttgttttatacgatttttggaggacaaaatgt-tattttggtattttagacaacttgtacgtgggacaaaa 3735410  T
Q  218 agttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    ||||||| ||||||||||||| |||||||||||| ||||||||||    
T  3735411 agttgtgctgtggtttggtgatggacaaaaatatcagtttttgtc 3735455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 179 - 262
Target Start/End: Original strand, 11963356 - 11963439
Alignment:
Q  179 ctatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    ||||||| |||||| ||| |||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  11963356 ctattttggtattttagacaacttgcacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttttgtc 11963439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 125 - 262
Target Start/End: Complemental strand, 24181758 - 24181622
Alignment:
Q  125 ttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaaagttgtg 224  Q
    |||||| |||||||||||||| | || ||||||||| ||||| ||||       ||||||| |||||| ||| ||||| |||||||||||||||||| ||    
T  24181758 ttttatggcattgagtaatttgttgttttatacgatctttgggggacaaaatg-ctattttggtattttagacaacttatacgtgggacaaaaagttatg 24181660  T
Q  225 atgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
     |||||||||||||||||||||||||||||||||||||    
T  24181659 ctgtggtttggtgagggacaaaaatatgagtttttgtc 24181622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 125 - 262
Target Start/End: Original strand, 35701239 - 35701375
Alignment:
Q  125 ttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaaagttgtg 224  Q
    |||||| ||| |||||||||||| || ||||||||||||||  ||||       ||||||| |||||| ||| ||||||||||||| |||||||||| ||    
T  35701239 ttttatggcaatgagtaattttttgttttatacgatttttgagggacaaaatg-ctattttggtattttagacaacttgtacgtggaacaaaaagttatg 35701337  T
Q  225 atgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
     |||||||||||||||||||||||||||||||||||||    
T  35701338 ttgtggtttggtgagggacaaaaatatgagtttttgtc 35701375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 180 - 262
Target Start/End: Original strand, 553413 - 553495
Alignment:
Q  180 tatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    |||||| |||||| ||| ||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||    
T  553413 tattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagagacaaaaatatgagtttttgtc 553495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 180 - 262
Target Start/End: Complemental strand, 4689778 - 4689696
Alignment:
Q  180 tatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    ||||||||||||| ||  ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  4689778 tatttttgtattttaggcaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgtgtttttgtc 4689696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 180 - 262
Target Start/End: Original strand, 8136853 - 8136935
Alignment:
Q  180 tatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    |||||| |||||| ||| ||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  8136853 tattttggtattttagacaacttgtacgtaggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtc 8136935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 180 - 262
Target Start/End: Original strand, 24036246 - 24036328
Alignment:
Q  180 tatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    |||||| |||||| ||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||    
T  24036246 tattttggtattttagacaacttgtacgtgggataaaaagttgtgatgtggtttggtgagggacaaaaatatgagattttgtc 24036328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 93 - 256
Target Start/End: Original strand, 40182393 - 40182556
Alignment:
Q  93 tacatcacaagacaaaacaatacaagacaaactttt-atagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatt 191  Q
    |||| |||||| |||||||  ||| |||||| |||| || |||||||||||||||| || ||||||||||||||   |||       ||||||| |||||    
T  40182393 tacaacacaaggcaaaacagcacatgacaaattttttatggcattgagtaattttttgttttatacgatttttgagagacaaaatg-ctattttggtatt 40182491  T
Q  192 taagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtt 256  Q
    | ||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  40182492 ttagacaacttgtacatgggacaaaaagttgtgatgtggtttggtgagggacaaaaatataagtt 40182556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 108 - 262
Target Start/End: Complemental strand, 8561132 - 8560980
Alignment:
Q  108 aacaatacaagacaaacttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacg 207  Q
    ||||| ||| |||||| |||||| ||||||| |||||||| || ||||||||||||||| ||||        |||||| |||||| ||| |||||||||     
T  8561132 aacaaaacatgacaaatttttatggcattgattaattttttgttttatacgatttttgg-ggacgaaatgt-tattttggtattttagacaacttgtacc 8561035  T
Q  208 tgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    ||| ||||||||||||||||||||||||||||| |||||||||| ||||||||||    
T  8561034 tggaacaaaaagttgtgatgtggtttggtgaggaacaaaaatatcagtttttgtc 8560980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 125 - 262
Target Start/End: Complemental strand, 6284433 - 6284296
Alignment:
Q  125 ttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttg-tatttaagataacttgtacgtgggacaaaaagttgt 223  Q
    |||||| |||||||||||||||| || ||||||||||||||  ||||       ||||||||| |||||  || ||||||||||||||||||||||||||    
T  6284433 ttttatggcattgagtaattttttgttttatacgatttttgagggacaaaatg-ctatttttggtattttggacaacttgtacgtgggacaaaaagttgt 6284335  T
Q  224 gatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    | ||||||||||||||||||||||| || ||||||||||    
T  6284334 gttgtggtttggtgagggacaaaaaaataagtttttgtc 6284296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 125 - 262
Target Start/End: Original strand, 40489299 - 40489435
Alignment:
Q  125 ttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaaagttgtg 224  Q
    |||||| |||||||||||||||| || |||||| |||||||  ||||        |||||| |||||| ||| |||||||| ||||||||||||||||||    
T  40489299 ttttatggcattgagtaattttttgttttatacaatttttgagggacaaaatgt-tattttggtattttagacaacttgtatgtgggacaaaaagttgtg 40489397  T
Q  225 atgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
     |||| ||||||||||||||||||||||||||||||||    
T  40489398 ctgtgatttggtgagggacaaaaatatgagtttttgtc 40489435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 179 - 262
Target Start/End: Complemental strand, 22493500 - 22493417
Alignment:
Q  179 ctatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    |||||||  ||||| ||| |||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  22493500 ctattttgatattttagacaacttgtacgtgtgacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttttgtc 22493417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 180 - 262
Target Start/End: Complemental strand, 7770359 - 7770277
Alignment:
Q  180 tatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    ||||||||||||| ||  ||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| |||||||||    
T  7770359 tatttttgtattttaggcaacttgtacgtgggacaaaaagttgtgctgtggtttggtgaaggacaaaaatatgtgtttttgtc 7770277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 180 - 261
Target Start/End: Complemental strand, 700681 - 700600
Alignment:
Q  180 tatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgt 261  Q
    |||||| |||||| |||||||||||||||| |||||||||||||| ||||||||||||||| |||||||||||| |||||||    
T  700681 tattttggtattttagataacttgtacgtgagacaaaaagttgtgttgtggtttggtgaggaacaaaaatatgaatttttgt 700600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 125 - 260
Target Start/End: Original strand, 29241340 - 29241474
Alignment:
Q  125 ttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaaagttgtg 224  Q
    |||||| |||||||||||||||| || ||||||||||||||  ||||       |||||||  ||||| ||  |||||||||||||||||||||||||||    
T  29241340 ttttatggcattgagtaattttttgttttatacgatttttgagggacaaaatg-ctattttgatattttagccaacttgtacgtgggacaaaaagttgtg 29241438  T
Q  225 atgtggtttggtgagggacaaaaatatgagtttttg 260  Q
     |||||||||| |||||||||||||||||| |||||    
T  29241439 ctgtggtttggcgagggacaaaaatatgagcttttg 29241474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 132 - 259
Target Start/End: Original strand, 41459558 - 41459684
Alignment:
Q  132 gcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggt 231  Q
    |||||||||||||||| || ||||||||||||||  ||||        ||||||  ||||| ||| ||||||||||||| ||||||||||||| | ||||    
T  41459558 gcattgagtaattttttgttttatacgatttttgagggacaaaatgt-tattttgatattttagacaacttgtacgtggaacaaaaagttgtgctctggt 41459656  T
Q  232 ttggtgagggacaaaaatatgagttttt 259  Q
    ||||||||||||||||||||||||||||    
T  41459657 ttggtgagggacaaaaatatgagttttt 41459684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 203 - 260
Target Start/End: Original strand, 5673178 - 5673235
Alignment:
Q  203 gtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttg 260  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  5673178 gtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttg 5673235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 179 - 262
Target Start/End: Complemental strand, 32093062 - 32092980
Alignment:
Q  179 ctatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    ||||||| |||||| |||||| |||||||||||||||||||||||| ||||||||||||| |||||||||| | ||||||||||    
T  32093062 ctattttggtattttagataatttgtacgtgggacaaaaagttgtgctgtggtttggtga-ggacaaaaatttcagtttttgtc 32092980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 93 - 262
Target Start/End: Complemental strand, 23091471 - 23091302
Alignment:
Q  93 tacatcacaagacaaaacaatacaagacaaactt-ttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatt 191  Q
    |||| ||||||| | ||||| |||||||||| || |||| |||||||||||| ||| || ||||||||||||||  ||||        ||||||  ||||    
T  23091471 tacaacacaagatagaacaacacaagacaaatttcttatggcattgagtaatgttttgttttatacgatttttgagggacaaaatgt-tattttgatatt 23091373  T
Q  192 taagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    | ||| || || |||||| |||||||||||||| ||||||||| ||| |||||||||||||||||||||||    
T  23091372 ttagacaatttatacgtgagacaaaaagttgtgttgtggtttgatgacggacaaaaatatgagtttttgtc 23091302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 118 - 262
Target Start/End: Complemental strand, 7725950 - 7725807
Alignment:
Q  118 gacaaacttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttg-tatttaagataacttgtacgtgggacaaa 216  Q
    |||||| |||||| | ||||| |||||||| || ||||||||||||||| ||||       ||||||| | |||||| || ||||| |||||||||||||    
T  7725950 gacaaatttttatggaattgaataattttttgttttatacgatttttgggggacgaaatg-ctattttggatattta-gacaacttatacgtgggacaaa 7725853  T
Q  217 aagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    |||||||| ||||||||  ||| |||||||||||||||||||||||    
T  7725852 aagttgtgttgtggtttaatgaaggacaaaaatatgagtttttgtc 7725807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 179 - 262
Target Start/End: Complemental strand, 22432390 - 22432307
Alignment:
Q  179 ctatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    ||||||| |||||| ||| ||||||||| || |||||||| ||||| ||||||||| |||||||||||||||| ||||||||||    
T  22432390 ctattttggtattttagacaacttgtacttgagacaaaaaattgtgttgtggtttgatgagggacaaaaatatcagtttttgtc 22432307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 180 - 262
Target Start/End: Complemental strand, 18470508 - 18470426
Alignment:
Q  180 tatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    |||||| || ||| ||| ||||||||||||||| ||||||||||| ||||||||||| |||||||||||| | ||||||||||    
T  18470508 tattttggtgttttagacaacttgtacgtgggataaaaagttgtgctgtggtttggtaagggacaaaaatttcagtttttgtc 18470426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 140 - 262
Target Start/End: Original strand, 17031134 - 17031255
Alignment:
Q  140 taatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgag 239  Q
    ||||||||||||||||| ||||||| ||||||       |||||||||||||| | |||||||||||||||||| |||||||||| |||| |||  ||||    
T  17031134 taatttttggtcttatatgattttttgtggacaaaaag-ctatttttgtattttaaataacttgtacgtgggacgaaaagttgtgctgtgatttaatgag 17031232  T
Q  240 ggacaaaaatatgagtttttgtc 262  Q
    || ||||||| |  |||||||||    
T  17031233 gggcaaaaatttatgtttttgtc 17031255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 179 - 249
Target Start/End: Complemental strand, 27839154 - 27839084
Alignment:
Q  179 ctatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaat 249  Q
    ||||||| |||||| ||| ||||||||| || |||||||||||||  | ||||||||||||||||||||||    
T  27839154 ctattttggtattttagacaacttgtacatgagacaaaaagttgttttatggtttggtgagggacaaaaat 27839084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 171
Target Start/End: Original strand, 32313773 - 32313846
Alignment:
Q  98 cacaagacaaaacaatacaagacaaacttttatagcattgagtaatttttggtcttatacgatttttggtggac 171  Q
    ||||||||| ||||| ||| |||||| || ||||| ||||| ||||||||| |||||||||||||||| |||||    
T  32313773 cacaagacagaacaacacatgacaaatttgtatagtattgattaatttttgatcttatacgatttttgctggac 32313846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 188 - 262
Target Start/End: Original strand, 5598504 - 5598578
Alignment:
Q  188 tatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    ||||| ||| || ||||||||| |||||||||||||| ||| ||||| ||| ||||||||||||  |||||||||    
T  5598504 tattttagacaagttgtacgtgagacaaaaagttgtgctgttgtttgatgaaggacaaaaatatctgtttttgtc 5598578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 81; Significance: 3e-38; HSPs: 82)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 93 - 262
Target Start/End: Complemental strand, 33552996 - 33552827
Alignment:
Q  93 tacatcacaagacaaaacaatacaagacaaactttt-atagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatt 191  Q
    |||| |||||| |||||||| ||| |||||| |||| || |||||||||||||||| || ||||||||||||||  ||||       ||||||| |||||    
T  33552996 tacaacacaaggcaaaacaacacaggacaaattttttatggcattgagtaattttttgttttatacgatttttgagggacaaaatg-ctattttggtatt 33552898  T
Q  192 taagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    | ||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  33552897 ttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttttgtc 33552827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 132 - 262
Target Start/End: Original strand, 24002310 - 24002440
Alignment:
Q  132 gcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggt 231  Q
    |||||||||||||||| || ||||||||||||||  ||||       ||||||| |||||| ||| ||||||||||||||||||||||||||| ||||||    
T  24002310 gcattgagtaattttttgttttatacgatttttgagggacaaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggt 24002409  T
Q  232 ttggtgagggacaaaaatatgagtttttgtc 262  Q
    |||||||||||||||||||||||||||||||    
T  24002410 ttggtgagggacaaaaatatgagtttttgtc 24002440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 93 - 262
Target Start/End: Complemental strand, 20802685 - 20802516
Alignment:
Q  93 tacatcacaagacaaaacaatacaagacaaactttt-atagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatt 191  Q
    |||| |||||| || ||||| ||| |||||| |||| || |||||||||||||||| || ||||| ||||||||  ||||       ||||||| |||||    
T  20802685 tacaacacaaggcagaacaacacaggacaaattttttatggcattgagtaattttttgttttatatgatttttgagggacaaaatg-ctattttggtatt 20802587  T
Q  192 taagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    | ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20802586 ttagacaacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 20802516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 88 - 262
Target Start/End: Complemental strand, 55065491 - 55065318
Alignment:
Q  88 aataatacatcacaagacaaaacaatacaagacaaacttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttg 187  Q
    |||| |||| |||||| || ||||  ||| |||||| |||||| |||||||||||||||| || ||||||||||||||  ||||       |||||||      
T  55065491 aatagtacaacacaaggcagaacagcacaggacaaatttttatggcattgagtaattttttgttttatacgatttttgaaggacaaaatg-ctattttga 55065393  T
Q  188 tatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    ||||| ||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  55065392 tattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtc 55065318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 125 - 262
Target Start/End: Original strand, 23521845 - 23521981
Alignment:
Q  125 ttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaaagttgtg 224  Q
    |||||| |||||||||||||||| || ||||||||||||||  ||||       ||||||| |||||| ||| |||||||||||||||||||||||||||    
T  23521845 ttttatggcattgagtaattttttgttttatacgatttttgagggacaaaatg-ctattttggtattttagacaacttgtacgtgggacaaaaagttgtg 23521943  T
Q  225 atgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
     |||||||||||||||||||||||||||||||||||||    
T  23521944 ttgtggtttggtgagggacaaaaatatgagtttttgtc 23521981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 125 - 262
Target Start/End: Original strand, 43641064 - 43641200
Alignment:
Q  125 ttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaaagttgtg 224  Q
    |||||| |||||||||||||||| || ||||||||||||||  ||||       ||||||| |||||| ||| |||||||||||||||||||||||||||    
T  43641064 ttttatggcattgagtaattttttgttttatacgatttttgagggacaaaatg-ctattttggtattttagacaacttgtacgtgggacaaaaagttgtg 43641162  T
Q  225 atgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
     |||||||||||||||||||||||||||||||||||||    
T  43641163 ctgtggtttggtgagggacaaaaatatgagtttttgtc 43641200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 118 - 262
Target Start/End: Complemental strand, 44324470 - 44324327
Alignment:
Q  118 gacaaacttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaa 217  Q
    |||||| |||||| ||||||| |||||||| || ||||||||||||||| ||||       ||||||| |||||||| | ||||||||||||||||||||    
T  44324470 gacaaatttttatggcattgaataattttttgttttatacgatttttgggggacgaaatg-ctattttggtatttaaaacaacttgtacgtgggacaaaa 44324372  T
Q  218 agttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    ||||||| |||||||||||||||||||||||||| ||||||||||    
T  44324371 agttgtgctgtggtttggtgagggacaaaaatatcagtttttgtc 44324327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 93 - 261
Target Start/End: Original strand, 56154553 - 56154721
Alignment:
Q  93 tacatcacaagacaaaacaatacaagacaaactttt-atagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatt 191  Q
    |||| |||||| || |||| |||| |||||| |||| || |||||||||||||||| || ||||| ||||||||  ||||       ||||||| |||||    
T  56154553 tacaacacaaggcagaacagtacatgacaaattttttatggcattgagtaattttttgttttatatgatttttgagggacaaaatg-ctattttggtatt 56154651  T
Q  192 taagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgt 261  Q
    | ||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  56154652 ttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttttgt 56154721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 92 - 262
Target Start/End: Original strand, 24210249 - 24210420
Alignment:
Q  92 atacatcacaagacaaaacaatacaagacaaac-ttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtat 190  Q
    ||||| |||||| || ||||| ||| ||||||  |||||| | |||||||||||||| || ||||||||||||||  ||||       ||||||| ||||    
T  24210249 atacaacacaaggcagaacaacacatgacaaatattttatggtattgagtaattttttgttttatacgatttttgagggacaaaaatgctattttggtat 24210348  T
Q  191 ttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    || ||| ||||||||||||||| ||||||||||| |||||||||||||||||||| ||||||||||||||||    
T  24210349 tttagacaacttgtacgtgggataaaaagttgtgctgtggtttggtgagggacaataatatgagtttttgtc 24210420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 93 - 262
Target Start/End: Complemental strand, 33177186 - 33177017
Alignment:
Q  93 tacatcacaagacaaaacaatacaagacaaac-ttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatt 191  Q
    |||| ||||||||| ||||| | | ||||||  |||||| |||||||||||||||  || ||||||||||||||| ||||        |||||| |||||    
T  33177186 tacaacacaagacagaacaacaaaggacaaatattttatggcattgagtaattttatgttttatacgatttttgggggacaaaatgt-tattttggtatt 33177088  T
Q  192 taagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    | ||| ||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  33177087 ttagacaacttgtgcgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtc 33177017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 93 - 262
Target Start/End: Original strand, 21579958 - 21580127
Alignment:
Q  93 tacatcacaagacaaaacaatacaagacaaactttt-atagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatt 191  Q
    |||| |||||| || ||||| ||| |||||| |||| || | |||||||||||||| || ||||||||||||||  ||||       ||||||| |||||    
T  21579958 tacaacacaaggcagaacaacacaggacaaattttttatggtattgagtaatttttagttttatacgatttttgagggacaacatg-ctattttggtatt 21580056  T
Q  192 taagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    | ||| || ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21580057 ttagacaatttgtacgtgagacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 21580127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 133 - 262
Target Start/End: Complemental strand, 2725245 - 2725118
Alignment:
Q  133 cattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtt 232  Q
    ||||||||||||||| || ||||||||||||||  ||||       ||||||| |||||| ||| ||||||||||||| |||||||||||||||||||||    
T  2725245 cattgagtaattttttgttttatacgatttttgagggacaaaatg-ctattttggtattttagacaacttgtacgtgg-acaaaaagttgtgatgtggtt 2725148  T
Q  233 tggtgagggacaaaaatatgagtttttgtc 262  Q
    ||||||||||||||||||||||||||||||    
T  2725147 tggtgagggacaaaaatatgagtttttgtc 2725118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 125 - 262
Target Start/End: Complemental strand, 9512461 - 9512325
Alignment:
Q  125 ttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaaagttgtg 224  Q
    |||||| |||||||||||||||| || ||||| ||||||||  ||||       ||||||| |||||| ||| |||||||||||||||||||||||||||    
T  9512461 ttttatggcattgagtaattttttgttttatatgatttttgagggacaaaatg-ctattttggtattttagacaacttgtacgtgggacaaaaagttgtg 9512363  T
Q  225 atgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
     ||||||||||||| |||||||||||||||||||||||    
T  9512362 ctgtggtttggtgaaggacaaaaatatgagtttttgtc 9512325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 179 - 262
Target Start/End: Original strand, 38812538 - 38812621
Alignment:
Q  179 ctatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    ||||||| |||||| ||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  38812538 ctattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtc 38812621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 98 - 249
Target Start/End: Original strand, 7001792 - 7001940
Alignment:
Q  98 cacaagacaaaacaatacaagacaaacttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagat 197  Q
    ||||||||| ||||||||| |||||| |||||| ||||||| ||||||||||||||||||||||||||||||||        |||||| |||||| |||     
T  7001792 cacaagacagaacaatacaggacaaatttttatggcattgaataatttttggtcttatacgatttttggtggacaaatgt--tattttggtattt-agac 7001888  T
Q  198 aacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaat 249  Q
    ||||| ||| | | ||||||||||||| ||||||||||||||||||||||||    
T  7001889 aacttatacatagaacaaaaagttgtgttgtggtttggtgagggacaaaaat 7001940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 125 - 261
Target Start/End: Complemental strand, 29785658 - 29785523
Alignment:
Q  125 ttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaaagttgtg 224  Q
    |||||| ||||||| |||||||| || ||||||||||||||  ||||       ||||||| |||||| ||| |||||||||||||||||||||| ||||    
T  29785658 ttttatggcattgaataattttttgttttatacgatttttgagggacaaaatg-ctattttggtattttagacaacttgtacgtgggacaaaaagctgtg 29785560  T
Q  225 atgtggtttggtgagggacaaaaatatgagtttttgt 261  Q
     ||||||||||||||||||||||||||||||||||||    
T  29785559 ttgtggtttggtgagggacaaaaatatgagtttttgt 29785523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 126 - 262
Target Start/End: Original strand, 36497183 - 36497318
Alignment:
Q  126 tttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaaagttgtga 225  Q
    ||||||||||||||||||||||  | ||||||||||||||  ||||       |||||||  ||||| ||| |||||||| || ||||||||||||||||    
T  36497183 tttatagcattgagtaattttttattttatacgatttttgagggacagaatg-ctattttgatattttagacaacttgtatgttggacaaaaagttgtga 36497281  T
Q  226 tgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    |||||||||||||||||||||||||||||||||||||    
T  36497282 tgtggtttggtgagggacaaaaatatgagtttttgtc 36497318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 125 - 262
Target Start/End: Original strand, 42869938 - 42870072
Alignment:
Q  125 ttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaaagttgtg 224  Q
    |||||| |||||||||||||||| || ||||||||||||||  ||||       |||||||||||||| ||| ||||| ||||||||||||   ||||||    
T  42869938 ttttatggcattgagtaattttttgttttatacgatttttgagggacaaaaatgctatttttgtattttagacaacttatacgtgggacaa---gttgtg 42870034  T
Q  225 atgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
     |||||||||||||||||||||||||||||||||||||    
T  42870035 ctgtggtttggtgagggacaaaaatatgagtttttgtc 42870072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 93 - 262
Target Start/End: Original strand, 55593817 - 55593986
Alignment:
Q  93 tacatcacaagacaaaacaatacaagacaaactttt-atagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatt 191  Q
    |||| |||||| || |||||| ||| ||||| |||| || |||||||||||||||| || ||||||||||||||  ||||        |||||| |||||    
T  55593817 tacaacacaaggcagaacaatgcaaaacaaattttttatggcattgagtaattttttgttttatacgatttttgagggacaaaatgt-tattttggtatt 55593915  T
Q  192 taagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    | ||| ||||||||||||||| ||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  55593916 ttagacaacttgtacgtgggataaaaagttgtgctgtggtttggtgagggactaaaatatgagtttttgtc 55593986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 125 - 262
Target Start/End: Complemental strand, 49152220 - 49152085
Alignment:
Q  125 ttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaaagttgtg 224  Q
    |||||| |||||||||||||||| || |||||||||||||| |||||        |||||| || |||| || ||||||||||||||| |||||||||||    
T  49152220 ttttatggcattgagtaattttttgttttatacgatttttgatggacaaaatgt-tattttggttttta-gacaacttgtacgtgggataaaaagttgtg 49152123  T
Q  225 atgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
     |||||||||||||||||||||||||||||||||||||    
T  49152122 ttgtggtttggtgagggacaaaaatatgagtttttgtc 49152085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 125 - 262
Target Start/End: Complemental strand, 50728034 - 50727898
Alignment:
Q  125 ttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaaagttgtg 224  Q
    |||||| ||||||| |||||||| || ||||||||||||||  ||||        |||||| |||||| ||| |||||||||||||||||||||||||||    
T  50728034 ttttatggcattgaataattttttgttttatacgatttttgagggacaaaatgt-tattttggtattttagacaacttgtacgtgggacaaaaagttgtg 50727936  T
Q  225 atgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
     ||||||||| |||||||||||||||||||||||||||    
T  50727935 ttgtggtttgatgagggacaaaaatatgagtttttgtc 50727898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 125 - 262
Target Start/End: Complemental strand, 50736048 - 50735912
Alignment:
Q  125 ttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaaagttgtg 224  Q
    |||||| ||||||| |||||||| || ||||||||||||||  ||||        |||||| |||||| ||| |||||||||||||||||||||||||||    
T  50736048 ttttatggcattgaataattttttgttttatacgatttttgagggacaaaatgt-tattttggtattttagacaacttgtacgtgggacaaaaagttgtg 50735950  T
Q  225 atgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
     ||||||||| |||||||||||||||||||||||||||    
T  50735949 ttgtggtttgatgagggacaaaaatatgagtttttgtc 50735912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 125 - 262
Target Start/End: Original strand, 21202705 - 21202840
Alignment:
Q  125 ttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaaagttgtg 224  Q
    |||||| ||| |||||||||||| || ||||||||||||||| ||||       |||||||  ||||| ||| |||||||||||||||||||||||||||    
T  21202705 ttttatggcaatgagtaattttttgttttatacgatttttgg-ggacaaaatg-ctattttgatattttagacaacttgtacgtgggacaaaaagttgtg 21202802  T
Q  225 atgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
     |||||||||||||||||||||| ||||||||||||||    
T  21202803 ttgtggtttggtgagggacaaaattatgagtttttgtc 21202840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 179 - 262
Target Start/End: Original strand, 32181281 - 32181364
Alignment:
Q  179 ctatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    ||||||| |||||| ||| ||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||    
T  32181281 ctattttggtattttagacaacttgtacgtgggacaaaaagttgtactgtggtttggtgagggacaaaaatatgagtttttgtc 32181364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 114 - 262
Target Start/End: Complemental strand, 37695673 - 37695526
Alignment:
Q  114 acaagacaaacttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggac 213  Q
    |||||||||| |||||| ||||||| |||||||| || ||||||||||||||| ||||        ||||||  ||||| ||| ||| ||||||||||||    
T  37695673 acaagacaaatttttatggcattgaataattttttgttttatacgatttttgggggacgaaatgt-tattttgatattttagacaacctgtacgtgggac 37695575  T
Q  214 aaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    ||||||||||| ||||||||| |||||||||||||||| ||||||||||    
T  37695574 aaaaagttgtgttgtggtttgatgagggacaaaaatatcagtttttgtc 37695526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 88 - 262
Target Start/End: Complemental strand, 36743847 - 36743673
Alignment:
Q  88 aataatacatcacaagacaaaacaatacaagacaaactttt-atagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctattttt 186  Q
    ||||||||| || ||| || ||||  |||||||||| |||| || |||||||||||||| | || |||||| |||||||  ||||       |||||||     
T  36743847 aataatacaacataaggcagaacagcacaagacaaattttttatggcattgagtaatttgttgttttatacaatttttgagggacaaaatg-ctattttg 36743749  T
Q  187 gtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    |||||| ||| ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| ||||||||    
T  36743748 gtattttagacaacttgtacgtgggacaaaaagttgtgctgtagtttggtgagggacaaaaatatgaatttttgtc 36743673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 179 - 259
Target Start/End: Original strand, 50186546 - 50186626
Alignment:
Q  179 ctatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagttttt 259  Q
    |||||||||||||| ||| |||||||| |||||| ||||||||||| ||||||||||||||||||||||||||||||||||    
T  50186546 ctatttttgtattttagacaacttgtatgtgggataaaaagttgtgttgtggtttggtgagggacaaaaatatgagttttt 50186626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 179 - 262
Target Start/End: Original strand, 12600904 - 12600987
Alignment:
Q  179 ctatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    ||||||| |||||| ||| |||||||||||| |||||||||||||| ||||||||| |||||||||||||||||||||||||||    
T  12600904 ctattttggtattttagacaacttgtacgtgagacaaaaagttgtgttgtggtttgatgagggacaaaaatatgagtttttgtc 12600987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 108 - 259
Target Start/End: Original strand, 16320469 - 16320617
Alignment:
Q  108 aacaatacaagacaaacttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacg 207  Q
    ||||| |||||||||| |||||| ||||||| |||||||  || |||||||| |||||| |||        |||||||||||||| ||  ||| ||||||    
T  16320469 aacaacacaagacaaatttttatggcattgaataatttt--gttttatacgagttttggggga-tgaaattctatttttgtattttaggcaacctgtacg 16320565  T
Q  208 tgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagttttt 259  Q
    ||||||||||||||||| |||||||||||||||||||||||||| |||||||    
T  16320566 tgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatcagttttt 16320617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 179 - 262
Target Start/End: Original strand, 20694389 - 20694472
Alignment:
Q  179 ctatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    ||||||| |||||| ||| ||||||||||| ||||||||||||| | |||||||||||||||||||||||||||||||||||||    
T  20694389 ctattttggtattttagacaacttgtacgttggacaaaaagttgcgttgtggtttggtgagggacaaaaatatgagtttttgtc 20694472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 179 - 262
Target Start/End: Original strand, 37865771 - 37865854
Alignment:
Q  179 ctatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    ||||||| |||||| ||| ||||||||| ||||||||||||||||| |||| ||||||||||||||||||||||||||||||||    
T  37865771 ctattttggtattttagacaacttgtacatgggacaaaaagttgtgttgtgatttggtgagggacaaaaatatgagtttttgtc 37865854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 188 - 262
Target Start/End: Original strand, 1231338 - 1231412
Alignment:
Q  188 tatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    ||||| ||| ||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||    
T  1231338 tattttagacaacttgtacgtgggacaaaaagttgtgctgtggttttgtgagggacaaaaatatgagtttttgtc 1231412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 180 - 262
Target Start/End: Complemental strand, 2630018 - 2629936
Alignment:
Q  180 tatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    |||||| |||||| ||| |||||||||||| |||||||||||||||| |||| ||||||||||||||||||||||||||||||    
T  2630018 tattttggtattttagacaacttgtacgtgagacaaaaagttgtgatttggtctggtgagggacaaaaatatgagtttttgtc 2629936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 118 - 262
Target Start/End: Original strand, 52949679 - 52949821
Alignment:
Q  118 gacaaacttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaa 217  Q
    |||||| ||||||  |||||| ||||||||| | ||||||||||||||| ||||       |||||||  ||||| ||| ||||||||||||||||||||    
T  52949679 gacaaatttttatgacattgaataatttttgtt-ttatacgatttttgggggacaaaatg-ctattttgatattttagacaacttgtacgtgggacaaaa 52949776  T
Q  218 agttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    ||||||| ||||||||| |||||||||||||||| ||||||||||    
T  52949777 agttgtgttgtggtttgctgagggacaaaaatatcagtttttgtc 52949821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 125 - 262
Target Start/End: Original strand, 23327882 - 23328020
Alignment:
Q  125 ttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaa-agttgt 223  Q
    |||||| ||| |||||||||||| || ||||||||||||||| ||          |||||| |||||| ||| |||||||||||||||||||| ||||||    
T  23327882 ttttatggcaatgagtaattttttgttttatacgatttttggggggataaaatgttattttggtattttagacaacttgtacgtgggacaaaaaagttgt 23327981  T
Q  224 gatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    | ||||||||| |||||||||||||||||||||||||||    
T  23327982 gttgtggtttgctgagggacaaaaatatgagtttttgtc 23328020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 189 - 258
Target Start/End: Original strand, 52319351 - 52319420
Alignment:
Q  189 atttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttt 258  Q
    |||| ||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  52319351 attttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttt 52319420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 125 - 259
Target Start/End: Original strand, 4325756 - 4325889
Alignment:
Q  125 ttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaaagttgtg 224  Q
    |||||| ||| |||||||||||| || |||| |||||||||| ||||       ||||||| |||||| ||| |||||||||||||||||||||||||||    
T  4325756 ttttatggcaatgagtaattttttgttttatgcgatttttgggggacaaaatg-ctattttggtattttagacaacttgtacgtgggacaaaaagttgtg 4325854  T
Q  225 atgtggtttggtgagggacaaaaatatgagttttt 259  Q
     || ||||| ||||| |||||||||||||||||||    
T  4325855 ttgcggttttgtgagagacaaaaatatgagttttt 4325889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 198 - 262
Target Start/End: Original strand, 6776615 - 6776679
Alignment:
Q  198 aacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    ||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  6776615 aacttttacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtc 6776679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 125 - 262
Target Start/End: Original strand, 36885896 - 36886033
Alignment:
Q  125 ttttatagcattgagt-aatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaaagttgt 223  Q
    |||||| ||||||||| ||||||| || ||||||||||||||  ||||       ||||||  |||||| ||| || |||||||||||| ||||||||||    
T  36885896 ttttatggcattgagttaattttttgttttatacgatttttgagggacaaaatg-ctatttaggtattttagacaatttgtacgtgggataaaaagttgt 36885994  T
Q  224 gatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    | |||||||||||||||||||||||||||||||||||||    
T  36885995 gctgtggtttggtgagggacaaaaatatgagtttttgtc 36886033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 133 - 259
Target Start/End: Complemental strand, 47642604 - 47642479
Alignment:
Q  133 cattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtt 232  Q
    |||||| |||||||| || ||||||||||||||| ||||       |||||||  ||||| ||| ||||||||||||||||||||||||||| |||||||    
T  47642604 cattgaataattttttgttttatacgatttttgggggacaaaatg-ctattttgatattttagacaacttgtacgtgggacaaaaagttgtgttgtggtt 47642506  T
Q  233 tggtgagggacaaaaatatgagttttt 259  Q
    || |||||||||||||||| |||||||    
T  47642505 tgctgagggacaaaaatatcagttttt 47642479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 133 - 262
Target Start/End: Original strand, 54542963 - 54543090
Alignment:
Q  133 cattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtt 232  Q
    ||||||||||||||| || ||||||||||||||  ||||        |||||| |||||| ||| |||||||||||||||||||| |||||| | |||||    
T  54542963 cattgagtaattttttgttttatacgatttttgagggacaaaatga-tattttggtattttagacaacttgtacgtgggacaaaa-gttgtgctatggtt 54543060  T
Q  233 tggtgagggacaaaaatatgagtttttgtc 262  Q
    ||||||||||||||||||||||||||||||    
T  54543061 tggtgagggacaaaaatatgagtttttgtc 54543090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 179 - 262
Target Start/End: Complemental strand, 38486325 - 38486242
Alignment:
Q  179 ctatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    |||||||  ||||| ||| |||||||||||  |||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  38486325 ctattttgatattttagacaacttgtacgttagacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttttgtc 38486242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 180 - 262
Target Start/End: Original strand, 3649655 - 3649737
Alignment:
Q  180 tatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    |||||| || ||| ||| ||||||||||||||||||||||||||| |||||||||||||||||||||||| | ||||||||||    
T  3649655 tattttggtgttttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaattttagtttttgtc 3649737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 114 - 261
Target Start/End: Original strand, 37931874 - 37932020
Alignment:
Q  114 acaagacaaacttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggac 213  Q
    |||||||||  |||||| ||||||| |||||||| || |||||| |||||||| ||||       |||||||   |||| | | |||||||| || ||||    
T  37931874 acaagacaactttttatggcattgaataatttttcgttttatacaatttttgggggacgaaatg-ctattttgacattttaaacaacttgtatgtaggac 37931972  T
Q  214 aaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgt 261  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  37931973 aaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttgt 37932020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 194 - 262
Target Start/End: Original strand, 2786997 - 2787065
Alignment:
Q  194 agataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    |||||| |||||||||||||||||| |||||||||||||| |||| |||||||||||||||||||||||    
T  2786997 agataatttgtacgtgggacaaaaatttgtgatgtggtttagtgaaggacaaaaatatgagtttttgtc 2787065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 179 - 251
Target Start/End: Original strand, 28115270 - 28115342
Alignment:
Q  179 ctatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatat 251  Q
    ||||||| |||||| ||| |||||||| |||||||||||||||||| ||||||||||||||||||||||||||    
T  28115270 ctattttggtattttagacaacttgtatgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatat 28115342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 179 - 262
Target Start/End: Complemental strand, 20518090 - 20518007
Alignment:
Q  179 ctatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    ||||||| |||||| ||| |||||||||||||||||| ||||| || |||| ||||||||||||||||||||||| ||||||||    
T  20518090 ctattttggtattttagacaacttgtacgtgggacaagaagttatgctgtgatttggtgagggacaaaaatatgactttttgtc 20518007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 125 - 262
Target Start/End: Original strand, 34929880 - 34930016
Alignment:
Q  125 ttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaaagttgtg 224  Q
    |||||| ||||| ||||| |||| || ||||||||||||||| ||||       |||||||  ||||| ||| ||||||||  |||| ||||||||||||    
T  34929880 ttttatggcattcagtaaatttttgttttatacgatttttgggggacaaaatg-ctattttgatattttagacaacttgtatatggggcaaaaagttgtg 34929978  T
Q  225 atgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
     ||||||||||||||| |||||||||||||||||||||    
T  34929979 ctgtggtttggtgaggaacaaaaatatgagtttttgtc 34930016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 179 - 262
Target Start/End: Original strand, 41711865 - 41711948
Alignment:
Q  179 ctatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    ||||||| |||||| ||| ||| |||||||| |||||||||||||  |||||||||||||||||||||||||||||| ||||||    
T  41711865 ctattttggtattttagacaacctgtacgtgagacaaaaagttgtactgtggtttggtgagggacaaaaatatgagtctttgtc 41711948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 179 - 262
Target Start/End: Complemental strand, 44649232 - 44649149
Alignment:
Q  179 ctatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    |||||||  ||||| ||| ||||||||| ||||||||||||||||| ||||||||| |||||||||||||||| ||||||||||    
T  44649232 ctattttgatattttagacaacttgtacatgggacaaaaagttgtgttgtggtttgctgagggacaaaaatatcagtttttgtc 44649149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 187 - 262
Target Start/End: Complemental strand, 46680570 - 46680495
Alignment:
Q  187 gtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    |||||| ||| || ||||||||| |||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  46680570 gtattttagacaatttgtacgtgagacaaaaagttgtgctgtggtttggtaagggacaaaaatatgagtttttgtc 46680495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 118 - 262
Target Start/End: Complemental strand, 50178621 - 50178477
Alignment:
Q  118 gacaaacttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaa 217  Q
    |||||| ||||||  |||||| |||||||| || ||||||||||||||| ||||       |||||||  ||||| ||| ||||||||||||||||||||    
T  50178621 gacaaatttttatgacattgaataattttttgttttatacgatttttgggggacaaaatg-ctattttgatattttagacaacttgtacgtgggacaaaa 50178523  T
Q  218 a-gttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    | |||||| ||||||||| ||||| |||||||||| ||||||||||    
T  50178522 aagttgtgctgtggtttgctgaggcacaaaaatatcagtttttgtc 50178477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 205 - 262
Target Start/End: Original strand, 42772832 - 42772889
Alignment:
Q  205 acgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    |||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  42772832 acgtgggacaaaaagttgtgttgtggtttggtgaaggacaaaaatatgagtttttgtc 42772889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 98 - 259
Target Start/End: Complemental strand, 7555105 - 7554945
Alignment:
Q  98 cacaagacaaaacaatacaagacaaacttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagat 197  Q
    ||||||||| ||||  ||| |||||| |||||| ||||||| |||||||| || ||||||||||||||| || |       ||||||| |  ||| |||     
T  7555105 cacaagacagaacatcacacgacaaatttttatggcattgaataattttttgttttatacgatttttggagg-ccgaaatgctattttggatttttagac 7555007  T
Q  198 aacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagttttt 259  Q
    |||||||||||| |||||||||||||| | |||||| |||| ||||||||||| ||||||||    
T  7555006 aacttgtacgtgagacaaaaagttgtgttatggtttagtgaaggacaaaaatacgagttttt 7554945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 179 - 262
Target Start/End: Complemental strand, 50729610 - 50729527
Alignment:
Q  179 ctatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    ||||||| |||||| ||| |||||||||||| |||||||||||||| |||||||||||||  ||||||||| | ||||||||||    
T  50729610 ctattttggtattttagacaacttgtacgtgagacaaaaagttgtgctgtggtttggtgatagacaaaaatttcagtttttgtc 50729527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 118 - 262
Target Start/End: Original strand, 9807114 - 9807256
Alignment:
Q  118 gacaaacttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaa 217  Q
    |||||| || ||| ||||||| |||||||  || ||||||||||||||| ||||       ||||||| |||||| ||| ||||||||||| ||||||||    
T  9807114 gacaaatttgtatggcattgaataattttatgttttatacgatttttggaggacgaaatg-ctattttggtattttagacaacttgtacgtaggacaaaa 9807212  T
Q  218 agttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    ||||||  ||||||||||||| |||||||||  ||||||||||||    
T  9807213 agttgtactgtggtttggtga-ggacaaaaagttgagtttttgtc 9807256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 93 - 262
Target Start/End: Original strand, 29616102 - 29616266
Alignment:
Q  93 tacatcacaagacaaaacaatacaagacaaactttt-atagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatt 191  Q
    |||| ||||||||| ||||| ||| |||||| |||| || |||||||||||||||| || |||||||||||||   ||||        |||||| |||||    
T  29616102 tacaacacaagacagaacaacacatgacaaattttttatggcattgagtaattttttgttttatacgatttttaagggacaaaatgt-tattttggtatt 29616200  T
Q  192 taagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    | ||| || |||||||||||||||||||||||| ||     |||| |||||||||||||||||||||||||    
T  29616201 ttagacaatttgtacgtgggacaaaaagttgtgctg-----tggtcagggacaaaaatatgagtttttgtc 29616266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 198 - 262
Target Start/End: Complemental strand, 53200693 - 53200628
Alignment:
Q  198 aacttgtacgtgggacaaaaa-gttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    ||||||||||||||||||||| |||||| |||||||||||||||||||||||| | ||||||||||    
T  53200693 aacttgtacgtgggacaaaaaagttgtgctgtggtttggtgagggacaaaaatttcagtttttgtc 53200628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 198 - 262
Target Start/End: Complemental strand, 25978660 - 25978596
Alignment:
Q  198 aacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    |||||||| ||| |||||||||||||||| |||||||||||||||||||||| | ||||||||||    
T  25978660 aacttgtaagtgagacaaaaagttgtgatatggtttggtgagggacaaaaatttcagtttttgtc 25978596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 198 - 262
Target Start/End: Original strand, 26083376 - 26083440
Alignment:
Q  198 aacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    |||||||| ||||||||||||||| || |||||||||||||||||||||||| | ||||||||||    
T  26083376 aacttgtaagtgggacaaaaagttatgctgtggtttggtgagggacaaaaatttcagtttttgtc 26083440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 108 - 249
Target Start/End: Complemental strand, 20644379 - 20644239
Alignment:
Q  108 aacaatacaagacaaacttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacg 207  Q
    ||||| ||| |||| |||||||| ||||||| ||||||||| | ||||||||||||||||| ||       |||||||||||| | |||||||||||||     
T  20644379 aacaacacatgacacacttttatcgcattgaataatttttgattttatacgatttttggtgtac-aaaaatctatttttgtatcttagataacttgtaca 20644281  T
Q  208 tgggacaaaaagttgtgatgtggtttggtgagggacaaaaat 249  Q
     | ||||| ||| || |||||||||| ||||| |||||||||    
T  20644280 cgagacaagaagctgggatgtggtttagtgagagacaaaaat 20644239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 114 - 262
Target Start/End: Original strand, 29592849 - 29592996
Alignment:
Q  114 acaagacaaacttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggac 213  Q
    |||||||||| |||| | ||||||| |||||||| || ||||| ||||||||| ||||       | ||||| |  ||| ||| ||||| || |||||||    
T  29592849 acaagacaaatttttttggcattgaataattttttgttttatatgatttttgggggacgaaatgcc-attttggatttttagacaacttttatgtgggac 29592947  T
Q  214 aaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    ||||||||||| |||||||| |||| | |||||||||||||||||||||    
T  29592948 aaaaagttgtgctgtggtttagtgaagtacaaaaatatgagtttttgtc 29592996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 188 - 262
Target Start/End: Original strand, 43739488 - 43739562
Alignment:
Q  188 tatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    ||||| ||| |||||||| ||||||||||| |||||| |||||||||||||||||||| ||| | ||||||||||    
T  43739488 tattttagacaacttgtatgtgggacaaaatgttgtgttgtggtttggtgagggacaataatttcagtttttgtc 43739562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 100 - 233
Target Start/End: Original strand, 9435338 - 9435471
Alignment:
Q  100 caagacaaaacaatacaagacaaacttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataa 199  Q
    ||||||| ||||| ||| |||||||||||||   ||||| | |||||||||||||||| ||||||||| |||       |||||||||||||| ||||||    
T  9435338 caagacagaacaacacacgacaaacttttatgatattgaattatttttggtcttataccatttttggtagac-aaaaagctatttttgtattttagataa 9435436  T
Q  200 c-ttgtacgtgggacaaaaagttgtgatgtggttt 233  Q
    | |||||  | || |||||||||||||||||||||    
T  9435437 ctttgtatattggtcaaaaagttgtgatgtggttt 9435471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 202 - 262
Target Start/End: Original strand, 11056083 - 11056143
Alignment:
Q  202 tgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    ||||| ||||||| ||||||||| ||||||||||| |||||||||||||| ||||||||||    
T  11056083 tgtacatgggacataaagttgtgttgtggtttggtaagggacaaaaatatcagtttttgtc 11056143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 210 - 258
Target Start/End: Complemental strand, 47361450 - 47361402
Alignment:
Q  210 ggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttt 258  Q
    ||||||||||||||| |||||||||||||||||||||||||||| ||||    
T  47361450 ggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgaatttt 47361402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 179 - 262
Target Start/End: Original strand, 9947947 - 9948030
Alignment:
Q  179 ctatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    ||||||| ||||||   |||||||||||||| ||||||||||||| ||||||||| |||||||| || ||| | ||||||||||    
T  9947947 ctattttggtattttgaataacttgtacgtgagacaaaaagttgtaatgtggtttagtgagggataagaattttagtttttgtc 9948030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 180 - 262
Target Start/End: Original strand, 39078680 - 39078762
Alignment:
Q  180 tatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    |||||| || ||| ||| |||| |||||| ||||||||| ||||| |||||||||||||||||||||||| | || |||||||    
T  39078680 tattttggtgttttagacaactcgtacgtaggacaaaaatttgtgttgtggtttggtgagggacaaaaatttcaggttttgtc 39078762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 180 - 262
Target Start/End: Original strand, 52673830 - 52673912
Alignment:
Q  180 tatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    ||||||||||||| ||||||||  |||||| |||||||| ||||| || ||||| ||||||||||||||| |  |||||||||    
T  52673830 tatttttgtattttagataactcatacgtgagacaaaaaattgtgttgaggtttagtgagggacaaaaatttctgtttttgtc 52673912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 180 - 249
Target Start/End: Complemental strand, 22318451 - 22318382
Alignment:
Q  180 tatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaat 249  Q
    |||||| || ||| ||| ||||| |||||  |||||||||||||| ||||||||||||||||||||||||    
T  22318451 tattttggtgttttagacaacttctacgtaagacaaaaagttgtgttgtggtttggtgagggacaaaaat 22318382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 214 - 262
Target Start/End: Complemental strand, 6973946 - 6973898
Alignment:
Q  214 aaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    ||||||||||| |||||||||| ||||||||||| ||||||||||||||    
T  6973946 aaaaagttgtgttgtggtttggcgagggacaaaattatgagtttttgtc 6973898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 179 - 230
Target Start/End: Original strand, 40792435 - 40792486
Alignment:
Q  179 ctatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtgg 230  Q
    |||||||||||||| ||||||||||||| ||  |||||||||||||||||||    
T  40792435 ctatttttgtattttagataacttgtacatgaaacaaaaagttgtgatgtgg 40792486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 179 - 246
Target Start/End: Original strand, 43893595 - 43893662
Alignment:
Q  179 ctatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaa 246  Q
    |||||||||||||| ||||||| || ||||| |||||||| ||||| |||||||| |||| |||||||    
T  43893595 ctatttttgtattttagataacctgcacgtgagacaaaaaattgtgttgtggtttagtgaaggacaaa 43893662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 180 - 246
Target Start/End: Complemental strand, 31445943 - 31445878
Alignment:
Q  180 tatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaa 246  Q
    ||||||||||||| |||||| ||||||||| | |||||||||||||||| |||| ||| ||||||||    
T  31445943 tatttttgtattttagataatttgtacgtgtggcaaaaagttgtgatgttgtttagtg-gggacaaa 31445878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 180 - 246
Target Start/End: Original strand, 38520518 - 38520584
Alignment:
Q  180 tatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaa 246  Q
    |||||| |||||| | | ||||||| ||||||||||||| || || |||||||||||||||||||||    
T  38520518 tattttggtattttatacaacttgtgcgtgggacaaaaaattatgctgtggtttggtgagggacaaa 38520584  T

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Target: chr4; HSP #76
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 180 - 221
Target Start/End: Original strand, 41720862 - 41720903
Alignment:
Q  180 tatttttgtatttaagataacttgtacgtgggacaaaaagtt 221  Q
    ||||||||||||| |||||| |||||||||||||||||||||    
T  41720862 tatttttgtattttagataatttgtacgtgggacaaaaagtt 41720903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 171
Target Start/End: Original strand, 985214 - 985293
Alignment:
Q  91 aatacatcacaagacaaaacaatacaagacaaacttttatagcattgagtaatttttggtcttatacgatttttggtggac 171  Q
    |||||| ||||||||||||||  | |||||||| |||||| |  |||| ||||||||||||||||| |||||||| |||||    
T  985214 aatacaacacaagacaaaacatcataagacaaatttttatggt-ttgaataatttttggtcttatatgatttttgctggac 985293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 125 - 218
Target Start/End: Original strand, 14296562 - 14296654
Alignment:
Q  125 ttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaaa 218  Q
    |||||| |||||||||||||||| || |||||||||||||||  |||        |||||| |||||| ||| |||||||||||||||||||||    
T  14296562 ttttatggcattgagtaattttttgttttatacgatttttgggagacaaaatgt-tattttggtattttagacaacttgtacgtgggacaaaaa 14296654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 125 - 218
Target Start/End: Original strand, 14314810 - 14314902
Alignment:
Q  125 ttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaaa 218  Q
    |||||| |||||||||||||||| || |||||||||||||||  |||        |||||| |||||| ||| |||||||||||||||||||||    
T  14314810 ttttatggcattgagtaattttttgttttatacgatttttgggagacaaaatgt-tattttggtattttagacaacttgtacgtgggacaaaaa 14314902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 181 - 233
Target Start/End: Complemental strand, 45577758 - 45577706
Alignment:
Q  181 atttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggttt 233  Q
    ||||| |||||| ||| |||||| |||||||||||||||||||| ||||||||    
T  45577758 attttggtattttagacaacttgcacgtgggacaaaaagttgtgttgtggttt 45577706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 204 - 258
Target Start/End: Original strand, 13110370 - 13110425
Alignment:
Q  204 tacgtgggacaaaaagttgtgatgtgg-tttggtgagggacaaaaatatgagtttt 258  Q
    ||||||||||||| ||||||| ||||| ||| |||| |||||||||||||||||||    
T  13110370 tacgtgggacaaacagttgtgttgtggttttagtgaaggacaaaaatatgagtttt 13110425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 221
Target Start/End: Original strand, 42772724 - 42772818
Alignment:
Q  126 tttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaaagtt 221  Q
    ||||| |||||||||||||||| || ||||| ||||||||| |||         |||||| |||||| ||||||||| ||||||||||||||||||    
T  42772724 tttatggcattgagtaattttttgttttatatgatttttggaggaaaaaatgt-tattttggtattttagataacttatacgtgggacaaaaagtt 42772818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 80; Significance: 1e-37; HSPs: 2)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 125 - 262
Target Start/End: Complemental strand, 12670 - 12534
Alignment:
Q  125 ttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaaagttgtg 224  Q
    ||||||||||||||||||||||| || ||||||||||||||  ||||       ||||||| |||||| ||| |||||||||||||||||||||||||||    
T  12670 ttttatagcattgagtaattttttgttttatacgatttttgagggacaaaatg-ctattttggtattttagacaacttgtacgtgggacaaaaagttgtg 12572  T
Q  225 atgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
     |||||||||||||||||||||||||||||||||||||    
T  12571 ttgtggtttggtgagggacaaaaatatgagtttttgtc 12534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 125 - 262
Target Start/End: Complemental strand, 18188 - 18052
Alignment:
Q  125 ttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaaagttgtg 224  Q
    ||||||||||||||||||||||| || ||||||||||||||  ||||       ||||||| |||||| ||| |||||||||||||||||||||||||||    
T  18188 ttttatagcattgagtaattttttgttttatacgatttttgagggacaaaatg-ctattttggtattttagacaacttgtacgtgggacaaaaagttgtg 18090  T
Q  225 atgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
     |||||||||||||||||||||||||||||||||||||    
T  18089 ttgtggtttggtgagggacaaaaatatgagtttttgtc 18052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 80; Significance: 1e-37; HSPs: 63)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 125 - 262
Target Start/End: Original strand, 16386825 - 16386961
Alignment:
Q  125 ttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaaagttgtg 224  Q
    |||||| |||||||||||||||| || ||||||||||||||  ||||       ||||||| |||||| ||| |||||||||||||||||||||||||||    
T  16386825 ttttatggcattgagtaattttttgttttatacgatttttgagggacaaaatg-ctattttggtattttagacaacttgtacgtgggacaaaaagttgtg 16386923  T
Q  225 atgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    ||||||||||||||||||||||||||||||||||||||    
T  16386924 atgtggtttggtgagggacaaaaatatgagtttttgtc 16386961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 125 - 262
Target Start/End: Complemental strand, 844927 - 844791
Alignment:
Q  125 ttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaaagttgtg 224  Q
    |||||| |||||||||||||||| || ||||||||||||||  ||||       ||||||| |||||| ||| |||||||||||||||||||||||||||    
T  844927 ttttatggcattgagtaattttttgttttatacgatttttgagggacaaaatg-ctattttggtattttagacaacttgtacgtgggacaaaaagttgtg 844829  T
Q  225 atgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
     |||||||||||||||||||||||||||||||||||||    
T  844828 ctgtggtttggtgagggacaaaaatatgagtttttgtc 844791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 113 - 262
Target Start/End: Original strand, 16437321 - 16437469
Alignment:
Q  113 tacaagacaaacttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtggga 212  Q
    |||| |||||| |||||| |||||||||||||||| || ||||||||||||||  ||||       |||||||  ||||| ||| |||||||||||||||    
T  16437321 tacaggacaaatttttatggcattgagtaattttttgttttatacgatttttgaaggacaaaatg-ctattttgatattttagacaacttgtacgtggga 16437419  T
Q  213 caaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||    
T  16437420 caaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtc 16437469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 91 - 262
Target Start/End: Complemental strand, 45491113 - 45490942
Alignment:
Q  91 aatacatcacaagacaaaacaatacaagacaaacttt-tatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgta 189  Q
    |||||| |||||| || ||||  ||| |||||| ||| ||| |||||||||||||||| || ||||||||||||||  ||||       ||||||| |||    
T  45491113 aatacaacacaaggcagaacagcacatgacaaattttgtatggcattgagtaattttttgttttatacgatttttgagggacaaaatg-ctattttggta 45491015  T
Q  190 tttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    ||| ||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  45491014 ttttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtc 45490942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 93 - 262
Target Start/End: Complemental strand, 6711282 - 6711113
Alignment:
Q  93 tacatcacaagacaaaacaatacaagacaaactttt-atagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatt 191  Q
    |||| |||||| || ||||  |||||||||| |||| || |||||||||||||||| || ||||||||||||||  ||||       ||||||| |||||    
T  6711282 tacaacacaaggcagaacagcacaagacaaattttttatggcattgagtaattttttgttttatacgatttttgagggacaaaatg-ctattttggtatt 6711184  T
Q  192 taagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    | ||| ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||    
T  6711183 ttagacaacttgtacgtgggacaaaaaattgtgttgtggtttggtgagggacaaaaatatgagtttttgtc 6711113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 93 - 262
Target Start/End: Original strand, 7183856 - 7184025
Alignment:
Q  93 tacatcacaagacaaaacaatacaagacaaactttt-atagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatt 191  Q
    |||| ||||||||| ||||||||| |||||| |||| || |||||||||||||||| || ||||||||||||||   |||       |||| || |||||    
T  7183856 tacaacacaagacagaacaatacaggacaaattttttatggcattgagtaattttttgttttatacgatttttgagagacaaaata-ctatattggtatt 7183954  T
Q  192 taagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    | ||| ||||||||||| ||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  7183955 ttagacaacttgtacgtaggacaaaaagttgtgttgtggtttggtaagggacaaaaatatgagtttttgtc 7184025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 125 - 262
Target Start/End: Complemental strand, 35387514 - 35387378
Alignment:
Q  125 ttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaaagttgtg 224  Q
    |||||| |||||||||||||||| || ||||||||||||||  |||        ||||||| |||||| ||| ||||||||||||| |||||||||||||    
T  35387514 ttttatggcattgagtaattttttgttttatacgatttttgaggga-taaaatgctattttggtattttagacaacttgtacgtggaacaaaaagttgtg 35387416  T
Q  225 atgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
     |||||||||||||||||||||||||||||||||||||    
T  35387415 ctgtggtttggtgagggacaaaaatatgagtttttgtc 35387378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 179 - 262
Target Start/End: Complemental strand, 1351585 - 1351502
Alignment:
Q  179 ctatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    ||||||| |||||| ||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  1351585 ctattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtc 1351502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 125 - 262
Target Start/End: Original strand, 12890209 - 12890345
Alignment:
Q  125 ttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaaagttgtg 224  Q
    |||||| |||||||||||||||| || ||||||||||||||  ||||       ||||||| |||| | ||| |||||||||||||||||||||||||||    
T  12890209 ttttatggcattgagtaattttttgttttatacgatttttgagggacaaaatg-ctattttggtatcttagacaacttgtacgtgggacaaaaagttgtg 12890307  T
Q  225 atgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
     ||||||||| |||||||||||||||||||||||||||    
T  12890308 ctgtggtttgatgagggacaaaaatatgagtttttgtc 12890345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 125 - 262
Target Start/End: Original strand, 16451098 - 16451234
Alignment:
Q  125 ttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaaagttgtg 224  Q
    |||||| |||||||||||||||| || ||||||||||||||  ||||       ||||||| |||||| ||| |||||||| ||||||||||||||||||    
T  16451098 ttttatggcattgagtaattttttgttttatacgatttttgagggacaaaatg-ctattttggtattttagacaacttgtatgtgggacaaaaagttgtg 16451196  T
Q  225 atgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
     |||||||||||||| ||||||||||||||||||||||    
T  16451197 ttgtggtttggtgagagacaaaaatatgagtttttgtc 16451234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 91 - 262
Target Start/End: Original strand, 17887883 - 17888055
Alignment:
Q  91 aatacatcacaagacaaaacaatacaagacaaactttt-atagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgta 189  Q
    |||||| |||||| || ||||| ||| |||||| |||| || |||||||||||||| | || ||||||||||||||| ||          |||||| |||    
T  17887883 aatacaacacaaggcagaacaacacatgacaaattttttatggcattgagtaatttgttgttttatacgatttttggggggacaaaatgttattttggta 17887982  T
Q  190 tttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    ||| ||| ||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||    
T  17887983 ttttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggcgagggacaaaaatatgagtttttgtc 17888055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 125 - 262
Target Start/End: Complemental strand, 28340506 - 28340370
Alignment:
Q  125 ttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaaagttgtg 224  Q
    |||||| |||||||||||||||| || ||||||||||||||  ||||       ||||||| |||||| ||| |||||||||||| ||||||||||||||    
T  28340506 ttttatggcattgagtaattttttgttttatacgatttttgagggacaaaatg-ctattttggtattttagacaacttgtacgtgagacaaaaagttgtg 28340408  T
Q  225 atgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
     ||||||||| |||||||||||||||||||||||||||    
T  28340407 ctgtggtttgatgagggacaaaaatatgagtttttgtc 28340370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 125 - 262
Target Start/End: Complemental strand, 30105883 - 30105747
Alignment:
Q  125 ttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaaagttgtg 224  Q
    |||||| ||||| |||||||||| || ||||||||||||||  ||||       ||||||| |||||| ||| |||||||||||||||||||||||| ||    
T  30105883 ttttatggcattaagtaattttttgttttatacgatttttgagggacaaaatg-ctattttggtattttagacaacttgtacgtgggacaaaaagttatg 30105785  T
Q  225 atgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
     |||||||||||||||||||||||||||||||||||||    
T  30105784 ctgtggtttggtgagggacaaaaatatgagtttttgtc 30105747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 125 - 262
Target Start/End: Original strand, 42510496 - 42510632
Alignment:
Q  125 ttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaaagttgtg 224  Q
    |||||| ||||||| |||||||| || ||||||||||||||  ||||       ||||||| |||||| ||| |||||||||||||||||||||||||||    
T  42510496 ttttatggcattgaataattttttgttttatacgatttttgagggacaaaatg-ctattttggtattttagacaacttgtacgtgggacaaaaagttgtg 42510594  T
Q  225 atgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
     |||||||||||||| ||||||||||||||||||||||    
T  42510595 ctgtggtttggtgagagacaaaaatatgagtttttgtc 42510632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 125 - 262
Target Start/End: Original strand, 51264466 - 51264602
Alignment:
Q  125 ttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaaagttgtg 224  Q
    |||||| |||||||||||||||| || |||||||||||||   ||||       ||||||| |||||| | | |||||||||||||||||||||||||||    
T  51264466 ttttatggcattgagtaattttttgttttatacgatttttaaaggacaaaatg-ctattttagtattttaaacaacttgtacgtgggacaaaaagttgtg 51264564  T
Q  225 atgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
     |||||||||||||||||||||||||||||||||||||    
T  51264565 ttgtggtttggtgagggacaaaaatatgagtttttgtc 51264602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 118 - 262
Target Start/End: Original strand, 25539819 - 25539962
Alignment:
Q  118 gacaaacttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaa 217  Q
    |||||| |||||| || |||| |||||||| || ||||||||||||||| ||||       ||||||| |||||||| | |||||||| |||||||||||    
T  25539819 gacaaatttttatggctttgaataattttttgttttatacgatttttgggggacgaaatg-ctattttggtatttaaaacaacttgtaggtgggacaaaa 25539917  T
Q  218 agttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    ||||||| |||||||||||||||||||||||||| ||||||||||    
T  25539918 agttgtgttgtggtttggtgagggacaaaaatatcagtttttgtc 25539962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 118 - 262
Target Start/End: Original strand, 31004096 - 31004239
Alignment:
Q  118 gacaaacttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaa 217  Q
    |||||| |||||| ||||||| |||||||| || ||||| ||||||||| ||||       ||||||| |||||| ||| ||||||||||||||||||||    
T  31004096 gacaaatttttatggcattgaataattttttgttttataggatttttgggggacgaaata-ctattttggtattttagacaacttgtacgtgggacaaaa 31004194  T
Q  218 agttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    ||||||| ||||||||||||||||||||||| || ||||||||||    
T  31004195 agttgtgttgtggtttggtgagggacaaaaacatcagtttttgtc 31004239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 125 - 258
Target Start/End: Complemental strand, 44738244 - 44738113
Alignment:
Q  125 ttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaaagttgtg 224  Q
    |||||| |||||||||||||||| || ||||||||||||||  | |        |||||||  ||||| ||| |||||||||||||||||||||||||||    
T  44738244 ttttatggcattgagtaattttttgttttatacgatttttgaggaa--taaaaactattttgctattttagacaacttgtacgtgggacaaaaagttgtg 44738147  T
Q  225 atgtggtttggtgagggacaaaaatatgagtttt 258  Q
    ||||||||||||||||||||||||||||||||||    
T  44738146 atgtggtttggtgagggacaaaaatatgagtttt 44738113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 98 - 261
Target Start/End: Original strand, 1601116 - 1601277
Alignment:
Q  98 cacaagacaaaacaatacaagacaaactttt-atagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaaga 196  Q
    |||||| || ||||| |||||||||| |||| || ||| |||||||||||| || || |||||||||||||||||       ||||||| |||||| |||    
T  1601116 cacaaggcagaacaacacaagacaaattttttatggcaatgagtaattttttgttttgtacgatttttggtggacaaaatg-ctattttggtattttaga 1601214  T
Q  197 taacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgt 261  Q
     |||||||| |||||||||||||||||| ||||||||||||||||||||||  ||||||||||||    
T  1601215 caacttgtatgtgggacaaaaagttgtgttgtggtttggtgagggacaaaa--atgagtttttgt 1601277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 125 - 262
Target Start/End: Complemental strand, 26118418 - 26118282
Alignment:
Q  125 ttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaaagttgtg 224  Q
    |||||| ||||||| |||||||| || ||||||||||||||  ||||       ||||||| |||||| ||| ||||| |||||||||||||||||||||    
T  26118418 ttttatggcattgaataattttttgttttatacgatttttgagggacaaaatg-ctattttggtattttagacaacttttacgtgggacaaaaagttgtg 26118320  T
Q  225 atgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
     |||| ||||||||||||||||||||||||||||||||    
T  26118319 ctgtgatttggtgagggacaaaaatatgagtttttgtc 26118282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 125 - 262
Target Start/End: Original strand, 32270324 - 32270460
Alignment:
Q  125 ttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaaagttgtg 224  Q
    |||||| |||||||||||||||| || ||||| ||||||||  ||||       |||||||  ||||| ||| ||||||||| |||||||||||||||||    
T  32270324 ttttatggcattgagtaattttttgttttatatgatttttgagggacaaaatg-ctattttgatattttagacaacttgtacatgggacaaaaagttgtg 32270422  T
Q  225 atgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
     |||||||||||||||||||||||||||||||||||||    
T  32270423 ctgtggtttggtgagggacaaaaatatgagtttttgtc 32270460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 179 - 259
Target Start/End: Complemental strand, 16476305 - 16476225
Alignment:
Q  179 ctatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagttttt 259  Q
    ||||||| |||||| ||| |||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||    
T  16476305 ctattttggtattttagacaacttgtacgtgggacaaaaagttgtgccgtggtttggtgagggacaaaaatatgagttttt 16476225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 125 - 262
Target Start/End: Complemental strand, 24339840 - 24339705
Alignment:
Q  125 ttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaaagttgtg 224  Q
    |||||| ||||||| |||||||| || ||||||||| ||||| ||||       ||||||| |||||| ||| ||||||||||||||| |||||||||||    
T  24339840 ttttatggcattgaataattttttgttttatacgatgtttgggggacaatg---ctattttggtattttagacaacttgtacgtgggaaaaaaagttgtg 24339744  T
Q  225 atgtgg-tttggtgagggacaaaaatatgagtttttgtc 262  Q
     ||||| ||||||||||||||||||||||||||||||||    
T  24339743 ttgtggttttggtgagggacaaaaatatgagtttttgtc 24339705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 179 - 262
Target Start/End: Complemental strand, 32289494 - 32289411
Alignment:
Q  179 ctatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    ||||||| |||||| | | ||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  32289494 ctattttggtattttaaacaacttgtacgtggaacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttttgtc 32289411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 179 - 262
Target Start/End: Complemental strand, 41967999 - 41967916
Alignment:
Q  179 ctatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    ||||||| |||||| ||| |||||||||||| |||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  41967999 ctattttggtattttagacaacttgtacgtgagacaaaaagttgtgttgtggtttggtaagggacaaaaatatgagtttttgtc 41967916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 125 - 262
Target Start/End: Original strand, 50540315 - 50540451
Alignment:
Q  125 ttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaaagttgtg 224  Q
    |||||| |||||||||||||| | || ||||| ||||||||| ||||       ||||||| |||||| ||| |||||||||||||||||||||||||||    
T  50540315 ttttatggcattgagtaatttgttgttttatatgatttttgggggacaaaatg-ctattttggtattttagacaacttgtacgtgggacaaaaagttgtg 50540413  T
Q  225 atgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
     ||||||||| ||| |||||||||||||||||| ||||    
T  50540414 ttgtggtttgatgaaggacaaaaatatgagtttatgtc 50540451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 180 - 262
Target Start/End: Complemental strand, 26764944 - 26764862
Alignment:
Q  180 tatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    |||||| |||||| ||| ||||||||||||||||||||||||||| ||||||| |||||||||||||||||| ||||||||||    
T  26764944 tattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggttcggtgagggacaaaaatataagtttttgtc 26764862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 180 - 262
Target Start/End: Original strand, 39281919 - 39282001
Alignment:
Q  180 tatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    |||||| |||||| ||| ||||||||||| ||||||||||||||  |||||||||||||||||||||||||||||||||||||    
T  39281919 tattttggtattttagacaacttgtacgtaggacaaaaagttgtactgtggtttggtgagggacaaaaatatgagtttttgtc 39282001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 180 - 262
Target Start/End: Original strand, 41972936 - 41973018
Alignment:
Q  180 tatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    |||||| |||||| ||| |||||||||||| |||||||||||||  |||||||||||||||||||||||||||||||||||||    
T  41972936 tattttggtattttagacaacttgtacgtgagacaaaaagttgtagtgtggtttggtgagggacaaaaatatgagtttttgtc 41973018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 118 - 262
Target Start/End: Original strand, 45658785 - 45658928
Alignment:
Q  118 gacaaacttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaa 217  Q
    |||||| |||||| || |||| |||||||| || ||||| ||||||||| ||||       ||||||| |||||||| | |||||||| |||||||||||    
T  45658785 gacaaatttttatggctttgaataattttttgttttatatgatttttgggggacgaaatg-ctattttggtatttaaaacaacttgtaggtgggacaaaa 45658883  T
Q  218 agttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    ||||||| |||||||||||||| ||||||||||| ||||||||||    
T  45658884 agttgtgttgtggtttggtgagcgacaaaaatatcagtttttgtc 45658928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 125 - 262
Target Start/End: Complemental strand, 17327852 - 17327716
Alignment:
Q  125 ttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaaagttgtg 224  Q
    |||||| || ||||||||||| | || ||||||||||||||| ||||        |||||| |||||| |||||| |||||| || ||||||||||||||    
T  17327852 ttttatggcgttgagtaatttgttgttttatacgatttttgggggacaaaatat-tattttggtattttagataatttgtacatgagacaaaaagttgtg 17327754  T
Q  225 atgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
     |||| ||||||||||||||||||||||||||||||||    
T  17327753 ctgtgatttggtgagggacaaaaatatgagtttttgtc 17327716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 125 - 259
Target Start/End: Complemental strand, 42705441 - 42705308
Alignment:
Q  125 ttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaaagttgtg 224  Q
    |||||| ||| |||||||||||| || ||||| ||||||||| ||||       |||||||   |||| ||| |||||||||||||||| ||||||||||    
T  42705441 ttttatggcaatgagtaattttttgttttatatgatttttgggggacaaaatg-ctattttgacatttcagacaacttgtacgtgggacgaaaagttgtg 42705343  T
Q  225 atgtggtttggtgagggacaaaaatatgagttttt 259  Q
     ||||||||||||||||||||||||||||||||||    
T  42705342 ttgtggtttggtgagggacaaaaatatgagttttt 42705308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 183 - 262
Target Start/End: Original strand, 5109756 - 5109835
Alignment:
Q  183 ttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    ||||| |||| ||| ||||||||| | ||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  5109756 ttttgcattttagacaacttgtactttggacaaaaagttgtgatgtggtttggtgagggacaaaaacatgagtttttgtc 5109835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 179 - 262
Target Start/End: Complemental strand, 11772782 - 11772699
Alignment:
Q  179 ctatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    ||||||| |||||||| | || ||||| |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||    
T  11772782 ctattttggtatttaaaacaatttgtaggtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatcagtttttgtc 11772699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 180 - 262
Target Start/End: Complemental strand, 6029450 - 6029368
Alignment:
Q  180 tatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    |||||| || ||| ||| ||||||||||||||||||||||||||| |||||||||||||||||||||||| | ||||||||||    
T  6029450 tattttggtgttttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatttcagtttttgtc 6029368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 180 - 262
Target Start/End: Complemental strand, 50382552 - 50382470
Alignment:
Q  180 tatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    ||||||||| ||| ||| ||||||||||||||||||||||||||| ||||||||||||| |||||||||| | ||||||||||    
T  50382552 tatttttgtgttttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgaaggacaaaaatttcagtttttgtc 50382470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 194 - 262
Target Start/End: Original strand, 10384406 - 10384474
Alignment:
Q  194 agataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    |||||| |||||||||||||||||||||||| |||||||| |||| |||||||||||||||||||||||    
T  10384406 agataatttgtacgtgggacaaaaagttgtgctgtggtttagtgaaggacaaaaatatgagtttttgtc 10384474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 113 - 262
Target Start/End: Original strand, 16704684 - 16704833
Alignment:
Q  113 tacaagacaaacttttatagcattgagtaa-tttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtggg 211  Q
    ||||||||||| |||||| ||||| | ||| ||||| || ||||||||||||||| ||||       ||||||| |||||| ||| |||||||| ||| |    
T  16704684 tacaagacaaatttttatggcattaaataaattttttgttttatacgatttttggaggacaaaaag-ctattttggtattttagacaacttgtatgtgag 16704782  T
Q  212 acaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    ||||| ||||||||||||||||||| ||||||||||||||  |||||||||    
T  16704783 acaaagagttgtgatgtggtttggtaagggacaaaaatatatgtttttgtc 16704833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 198 - 262
Target Start/End: Complemental strand, 38087127 - 38087063
Alignment:
Q  198 aacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    ||||||||| |||||||||||||||||||||||||| |||| |||||||||||||||||||||||    
T  38087127 aacttgtacttgggacaaaaagttgtgatgtggtttagtgaaggacaaaaatatgagtttttgtc 38087063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 179 - 262
Target Start/End: Complemental strand, 13994225 - 13994142
Alignment:
Q  179 ctatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    ||||||| |||||| ||| ||||||||| || |||||||||||||| |||||||||||||||||||||||| | ||||||||||    
T  13994225 ctattttggtattttagacaacttgtacatgagacaaaaagttgtgttgtggtttggtgagggacaaaaatttcagtttttgtc 13994142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 98 - 261
Target Start/End: Complemental strand, 51703393 - 51703232
Alignment:
Q  98 cacaagacaaaacaatacaagacaaactttt-atagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaaga 196  Q
    |||||| |||||||||||| |||||| |||| || |||||||||||||||| || |||||| |||||  | ||||        ||||||||||||| |||    
T  51703393 cacaaggcaaaacaatacatgacaaattttttatggcattgagtaattttttgttttataccattttgag-ggacaaaatgt-tatttttgtattttaga 51703296  T
Q  197 taacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgt 261  Q
     ||| |||| |||||||||||||||||| ||||| ||||||||| ||||||||||||||||||||    
T  51703295 caacatgtaggtgggacaaaaagttgtgttgtgg-ttggtgaggaacaaaaatatgagtttttgt 51703232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 118 - 262
Target Start/End: Complemental strand, 42512980 - 42512837
Alignment:
Q  118 gacaaacttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaa 217  Q
    |||||| ||||||  |||||| |||||||| || ||||||||||||||| ||||       |||||||  ||||| ||| || |||||||| ||||||||    
T  42512980 gacaaatttttatcacattgaataattttttgttttatacgatttttgggggacaaaatt-ctattttgatattttagacaatttgtacgtaggacaaaa 42512882  T
Q  218 agttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    ||||||| ||||||||| ||||| |||||||||| ||||||||||    
T  42512881 agttgtgttgtggtttgctgaggcacaaaaatatcagtttttgtc 42512837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 108 - 250
Target Start/End: Original strand, 38663086 - 38663227
Alignment:
Q  108 aacaatacaagacaaacttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacg 207  Q
    ||||| ||| |||||| ||||||  |||||| |||||||| || ||||||||||||||  ||||        ||||||  ||||| ||| ||||||||||    
T  38663086 aacaacacaggacaaatttttatgacattgaataattttttgttttatacgatttttgagggacaaaatgt-tattttgatattttagacaacttgtacg 38663184  T
Q  208 tgggacaaaaagttgtgatgtggtttggtgagggacaaaaata 250  Q
    ||||||||||||||||| ||||||||| |||||||||||||||    
T  38663185 tgggacaaaaagttgtgctgtggtttgctgagggacaaaaata 38663227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 133 - 259
Target Start/End: Complemental strand, 49303548 - 49303424
Alignment:
Q  133 cattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtt 232  Q
    ||||||||||||||| || ||||||||||||||| ||||        |||||| |||||| ||| ||||||||||| ||| ||||| ||||| |||||||    
T  49303548 cattgagtaattttttgttttatacgatttttgg-ggacaaaatgt-tattttagtattttagacaacttgtacgtaggataaaaaattgtgctgtggtt 49303451  T
Q  233 tggtgagggacaaaaatatgagttttt 259  Q
    |||||| ||||||||||||||||||||    
T  49303450 tggtgaaggacaaaaatatgagttttt 49303424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 125 - 262
Target Start/End: Complemental strand, 3415057 - 3414920
Alignment:
Q  125 ttttatagcattgagtaatttttg-gtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaaagttgt 223  Q
    |||||| ||||||||||||||||  || ||||| ||||||||| ||||       ||||||| |||||| | | |||| |||||||||| ||||| || |    
T  3415057 ttttatggcattgagtaatttttttgttttatatgatttttgggggacaaaatg-ctattttggtattttaaacaactagtacgtgggataaaaaattat 3414959  T
Q  224 gatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  3414958 gatgtagtttggtgagggacaaaaatatgagtttttgtc 3414920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 118 - 262
Target Start/End: Original strand, 50304615 - 50304758
Alignment:
Q  118 gacaaacttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaa 217  Q
    |||||| ||||||  |||||| |||||||| || ||||||||||||||| ||||       |||||||  ||||| ||| |||||  ||||| |||||||    
T  50304615 gacaaatttttatgacattgaataattttttgttttatacgatttttggaggacaaaatg-ctattttgatattttagacaacttaaacgtgagacaaaa 50304713  T
Q  218 agttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    ||||||| |||||||||  ||||||||||||||| ||||||||||    
T  50304714 agttgtgctgtggtttgcagagggacaaaaatatcagtttttgtc 50304758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 98 - 168
Target Start/End: Original strand, 4895337 - 4895407
Alignment:
Q  98 cacaagacaaaacaatacaagacaaacttttatagcattgagtaatttttggtcttatacgatttttggtg 168  Q
    ||||||||||||||| |||| |||||| ||||||| ||||| ||| |||| ||||||||||||||||||||    
T  4895337 cacaagacaaaacaacacaatacaaacgtttatagtattgaataagttttagtcttatacgatttttggtg 4895407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 205 - 262
Target Start/End: Complemental strand, 23799661 - 23799604
Alignment:
Q  205 acgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    ||||| || ||||||||||| |||||||||||||||||||||||||| ||||||||||    
T  23799661 acgtgcgataaaaagttgtgctgtggtttggtgagggacaaaaatatcagtttttgtc 23799604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 109 - 242
Target Start/End: Complemental strand, 2761774 - 2761643
Alignment:
Q  109 acaatacaagacaaacttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgt 208  Q
    |||| ||| |||| |||||||||| ||||| ||||||||||| ||||| |||||||| || ||       |||||||||||||| |||||| |||||| |    
T  2761774 acaacacatgacagacttttatagtattgaataatttttggttttatatgatttttgttg-acaaaaat-ctatttttgtattttagataatttgtactt 2761677  T
Q  209 gggacaaaaagttgtgatgtggtttggtgaggga 242  Q
    | |||||||| ||||| |||||||| ||||||||    
T  2761676 gagacaaaaaattgtgttgtggtttagtgaggga 2761643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 180 - 262
Target Start/End: Original strand, 46154925 - 46155014
Alignment:
Q  180 tatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggttt-------ggtgagggacaaaaatatgagtttttgtc 262  Q
    |||||| |||||| ||| |||||||| |||||||||||||||||| ||| ||||       |||||||||||||||||||||||||||||    
T  46154925 tattttggtattttagacaacttgtaagtgggacaaaaagttgtgctgtagtttgtagtttggtgagggacaaaaatatgagtttttgtc 46155014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 180 - 262
Target Start/End: Complemental strand, 6144135 - 6144053
Alignment:
Q  180 tatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    ||||||||| ||| ||| ||||| ||||||||| ||||||||||| |||||||||  |||||||||||||   ||||||||||    
T  6144135 tatttttgtgttttagacaacttctacgtgggagaaaaagttgtgttgtggtttgccgagggacaaaaattgcagtttttgtc 6144053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 99 - 171
Target Start/End: Complemental strand, 30798920 - 30798848
Alignment:
Q  99 acaagacaaaacaatacaagacaaacttttatagcattgagtaatttttggtcttatacgatttttggtggac 171  Q
    |||||||| ||||||| |  ||||| ||||||   ||||| ||||||||||||||||||||||||||||||||    
T  30798920 acaagacagaacaatatataacaaaattttatgatattgaataatttttggtcttatacgatttttggtggac 30798848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 99 - 259
Target Start/End: Complemental strand, 25343438 - 25343279
Alignment:
Q  99 acaagacaaaacaatacaagacaaacttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagata 198  Q
    |||||||| ||||| |||||||||| ||||||  |||||| |||||||| |  |||| |||||||||  ||||       ||||||| |  |||  || |    
T  25343438 acaagacagaacaacacaagacaaatttttatgacattgaataattttttgctttatgcgatttttgagggacgaaata-ctattttggatttttggaca 25343340  T
Q  199 acttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagttttt 259  Q
    ||||||||||| |||||||||||||  | |||||| |||| ||||||||||||| ||||||    
T  25343339 acttgtacgtgcgacaaaaagttgtactatggtttagtgaaggacaaaaatatgtgttttt 25343279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 228
Target Start/End: Original strand, 46447688 - 46447737
Alignment:
Q  179 ctatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgt 228  Q
    |||||||  ||||| ||||||||||||||||| |||||||||||||||||    
T  46447688 ctattttgatattttagataacttgtacgtggaacaaaaagttgtgatgt 46447737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 180 - 239
Target Start/End: Complemental strand, 16643331 - 16643272
Alignment:
Q  180 tatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgag 239  Q
    ||||||||||||| ||| ||| |||| ||||||||||||||||||  ||| |||||||||    
T  16643331 tatttttgtattttagacaacctgtatgtgggacaaaaagttgtgtcgtgatttggtgag 16643272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 179 - 262
Target Start/End: Original strand, 26733579 - 26733662
Alignment:
Q  179 ctatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    ||||||| |||||| ||| ||||||||| || | |||||||||||| | |||||| ||| ||||||| ||| | ||||||||||    
T  26733579 ctattttggtattttagacaacttgtacatgaggcaaaaagttgtgttatggtttagtgggggacaagaatttcagtttttgtc 26733662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 87
Target Start/End: Original strand, 4895337 - 4895375
Alignment:
Q  49 cacaagacaaaacaacacaatacaaacttttatggtatt 87  Q
    ||||||||||||||||||||||||||| ||||| |||||    
T  4895337 cacaagacaaaacaacacaatacaaacgtttatagtatt 4895375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 262
Target Start/End: Original strand, 17291620 - 17291685
Alignment:
Q  196 ataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    |||||||||||| ||||||||||||| || |||||||| ||| ||||||||||| |  |||||||||    
T  17291620 ataacttgtacgagggacaaaaagttttgttgtggtttagtg-gggacaaaaatttatgtttttgtc 17291685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 248
Target Start/End: Original strand, 7837157 - 7837226
Alignment:
Q  179 ctatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaa 248  Q
    |||||||  ||||| ||| |||||||  ||| ||||||||||||||||||| |||||| | |||||||||    
T  7837157 ctattttgatattttagacaacttgtctgtgagacaaaaagttgtgatgtgatttggtaatggacaaaaa 7837226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 180 - 233
Target Start/End: Original strand, 40856172 - 40856225
Alignment:
Q  180 tatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggttt 233  Q
    ||||||||||||| |||||| || || ||| |||||||||||||| ||||||||    
T  40856172 tatttttgtattttagataatttatatgtgagacaaaaagttgtgttgtggttt 40856225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 188 - 249
Target Start/End: Original strand, 570419 - 570482
Alignment:
Q  188 tatttaagataacttgtacgtgggacaaaaagttgtga--tgtggtttggtgagggacaaaaat 249  Q
    ||||| ||| ||||| |||| | ||||||||||||||   ||||||||||||||||||||||||    
T  570419 tattttagacaacttatacgcgagacaaaaagttgtgcattgtggtttggtgagggacaaaaat 570482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 198 - 262
Target Start/End: Original strand, 6771411 - 6771475
Alignment:
Q  198 aacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    |||||||| |||||| ||||||||||| |||| ||| ||||| ||||| ||| | ||||||||||    
T  6771411 aacttgtatgtgggagaaaaagttgtgttgtgatttagtgagtgacaagaattttagtttttgtc 6771475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 214 - 262
Target Start/End: Complemental strand, 21763218 - 21763170
Alignment:
Q  214 aaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    ||||||||||||||| |||||||||||||||| ||| | || |||||||    
T  21763218 aaaaagttgtgatgtagtttggtgagggacaagaatttcagcttttgtc 21763170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 125 - 262
Target Start/End: Original strand, 101911 - 102047
Alignment:
Q  125 ttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaaagttgtg 224  Q
    |||||| |||||||||||||||| || |||||||||||||   ||||       ||||||| |||||| ||| |||||||||||||||||||||||||||    
T  101911 ttttatggcattgagtaattttttgttttatacgattttttagggacaaaatg-ctattttggtattttagacaacttgtacgtgggacaaaaagttgtg 102009  T
Q  225 atgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    ||||||||||||||||||||||||||||||||||||||    
T  102010 atgtggtttggtgagggacaaaaatatgagtttttgtc 102047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 76; Significance: 3e-35; HSPs: 46)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 125 - 262
Target Start/End: Complemental strand, 15277447 - 15277311
Alignment:
Q  125 ttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaaagttgtg 224  Q
    ||||||||||||||||||||| | || |||||||||||||||  |||       ||||||| |||||| ||| ||||||||||||||| |||||||||||    
T  15277447 ttttatagcattgagtaatttgttgttttatacgatttttggaagacaaaatg-ctattttggtattttagacaacttgtacgtgggataaaaagttgtg 15277349  T
Q  225 atgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    ||||||||||||||||||||||||||||||||||||||    
T  15277348 atgtggtttggtgagggacaaaaatatgagtttttgtc 15277311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 98 - 262
Target Start/End: Original strand, 10959935 - 10960098
Alignment:
Q  98 cacaagacaaaacaatacaagacaaacttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagat 197  Q
    |||||| || ||||| ||| |||||| |||||| ||||||| | || ||| || ||||||||||||||| ||||       |||||||||||||| |||     
T  10959935 cacaaggcagaacaacacatgacaaatttttatggcattgaatgatattttgttttatacgatttttgggggacaaaatg-ctatttttgtattttagac 10960033  T
Q  198 aacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    ||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||    
T  10960034 aacttgtacgtgggacaaaaagttgtgttgtggtttgttgagggacaaaaatatgagtttttgtc 10960098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 133 - 261
Target Start/End: Original strand, 24242634 - 24242761
Alignment:
Q  133 cattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtt 232  Q
    ||||||||||||||| || ||||||||||||||  ||||       ||||||| |||||| ||| |||||||||||||||||||||||||||||||||||    
T  24242634 cattgagtaattttttgttttatacgatttttgagggacaaaatg-ctattttggtattttagacaacttgtacgtgggacaaaaagttgtgatgtggtt 24242732  T
Q  233 tggtgagggacaaaaatatgagtttttgt 261  Q
    |||||||||||||||||||||||||||||    
T  24242733 tggtgagggacaaaaatatgagtttttgt 24242761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 93 - 262
Target Start/End: Complemental strand, 3933007 - 3932838
Alignment:
Q  93 tacatcacaagacaaaacaatacaagacaaactttt-atagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatt 191  Q
    |||| ||||||||||||||  ||| |||||| |||| || ||||||| |||||||| || ||||||||||||||  ||||        |||||| |||||    
T  3933007 tacaacacaagacaaaacagcacaggacaaattttttatggcattgaataattttttgttttatacgatttttgagggacaaaatgt-tattttggtatt 3932909  T
Q  192 taagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    | ||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  3932908 ttagacaacttgtacgtgggacaaaaagttgtgatgtggtttggtgagagacaaaaatatgagtttttgtc 3932838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 93 - 262
Target Start/End: Original strand, 2614825 - 2614994
Alignment:
Q  93 tacatcacaagacaaaacaatacaagacaaactttt-atagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatt 191  Q
    |||| |||||| || ||||| ||| |||||| |||| || ||||||||||||||||  | ||||||||||||||  ||||       ||||||| |||||    
T  2614825 tacaacacaaggcagaacaacacatgacaaattttttatggcattgagtaattttttattttatacgatttttgagggacaaaatg-ctattttggtatt 2614923  T
Q  192 taagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    | ||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  2614924 ttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttttgtc 2614994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 125 - 262
Target Start/End: Original strand, 3259645 - 3259781
Alignment:
Q  125 ttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaaagttgtg 224  Q
    |||||| |||||||||||||||| || ||||||||||||||  ||||       ||||||| |||||| ||| ||||||||||||||| |||||||||||    
T  3259645 ttttatggcattgagtaattttttgttttatacgatttttgagggacaaaatg-ctattttggtattttagacaacttgtacgtgggataaaaagttgtg 3259743  T
Q  225 atgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
     |||||||||||||||||||||||||||||||||||||    
T  3259744 ttgtggtttggtgagggacaaaaatatgagtttttgtc 3259781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 125 - 262
Target Start/End: Complemental strand, 11613958 - 11613822
Alignment:
Q  125 ttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaaagttgtg 224  Q
    |||||| |||||||||||||||| || ||||||||||||||  ||||       ||||||| |||||| | | |||||||||||||||||||||||||||    
T  11613958 ttttatggcattgagtaattttttgttttatacgatttttgagggacaaaatg-ctattttggtattttatacaacttgtacgtgggacaaaaagttgtg 11613860  T
Q  225 atgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
     |||||||||||||||||||||||||||||||||||||    
T  11613859 ctgtggtttggtgagggacaaaaatatgagtttttgtc 11613822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 108 - 261
Target Start/End: Complemental strand, 31870284 - 31870132
Alignment:
Q  108 aacaatacaagacaaacttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacg 207  Q
    ||||| ||| |||||| |||||| ||||||| |||||||| || |||||||| |||||| ||||       |||||||||||||| ||| ||| | ||||    
T  31870284 aacaacacatgacaaatttttatggcattgaataattttttgttttatacgagttttgggggacgaaatg-ctatttttgtattttagacaacctatacg 31870186  T
Q  208 tgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgt 261  Q
    ||||||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  31870185 tgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatcagtttttgt 31870132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 125 - 262
Target Start/End: Complemental strand, 32132547 - 32132411
Alignment:
Q  125 ttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaaagttgtg 224  Q
    |||||| |||||||||||||| | || ||||||||||||||| ||||       |||||||  ||||| ||| |||||||||||||||||||||||||||    
T  32132547 ttttatggcattgagtaatttgttgttttatacgatttttgggggacaaaatg-ctattttgatattttagacaacttgtacgtgggacaaaaagttgtg 32132449  T
Q  225 atgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
     ||||| |||||||||||||||||||||||||||||||    
T  32132448 ttgtggattggtgagggacaaaaatatgagtttttgtc 32132411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 179 - 261
Target Start/End: Complemental strand, 167037 - 166955
Alignment:
Q  179 ctatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgt 261  Q
    ||||||| |||||| ||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  167037 ctattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttgt 166955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 180 - 262
Target Start/End: Original strand, 24203378 - 24203460
Alignment:
Q  180 tatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    |||||| |||||| ||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  24203378 tattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttttgtc 24203460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 93 - 259
Target Start/End: Original strand, 17867764 - 17867930
Alignment:
Q  93 tacatcacaagacaaaacaatacaagacaaactttt-atagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatt 191  Q
    |||| |||||| || ||||| ||| |||||| |||| || |||||||||||||||| || ||||||||||||||  ||||       ||||||| |||||    
T  17867764 tacaacacaaggcagaacaacacaggacaaattttttatggcattgagtaattttttgttttatacgatttttgagggacaaaatg-ctattttggtatt 17867862  T
Q  192 taagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagttttt 259  Q
    | ||| || |||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  17867863 ttagacaatttgtacgtgggacaaaaagttgtgctgtggtttgatgagggacaaaaatatgagttttt 17867930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 93 - 259
Target Start/End: Original strand, 17877547 - 17877713
Alignment:
Q  93 tacatcacaagacaaaacaatacaagacaaactttt-atagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatt 191  Q
    |||| |||||| || ||||| ||| |||||| |||| || |||||||||||||||| || ||||||||||||||  ||||       ||||||| |||||    
T  17877547 tacaacacaaggcagaacaacacaggacaaattttttatggcattgagtaattttttgttttatacgatttttgagggacaaaatg-ctattttggtatt 17877645  T
Q  192 taagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagttttt 259  Q
    | ||| || |||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  17877646 ttagacaatttgtacgtgggacaaaaagttgtgctgtggtttgatgagggacaaaaatatgagttttt 17877713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 125 - 262
Target Start/End: Complemental strand, 10324278 - 10324142
Alignment:
Q  125 ttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaaagttgtg 224  Q
    |||||| | |||||||||||||| || ||||||||||||| | ||||        |||||| |||||| ||| |||||||||||| ||||||||||||||    
T  10324278 ttttatgggattgagtaattttttgttttatacgattttttggggacaaaatgt-tattttggtattttagacaacttgtacgtgagacaaaaagttgtg 10324180  T
Q  225 atgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
     |||||||||||||||||||||||||||||||||||||    
T  10324179 ttgtggtttggtgagggacaaaaatatgagtttttgtc 10324142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 179 - 262
Target Start/End: Original strand, 11279143 - 11279226
Alignment:
Q  179 ctatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    ||||||| |||||| ||| |||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  11279143 ctattttggtattttagacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtc 11279226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 125 - 262
Target Start/End: Complemental strand, 15277104 - 15276968
Alignment:
Q  125 ttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaaagttgtg 224  Q
    |||||| |||||||||||||||| || ||||| ||||||||  ||||       |||||||  | ||| ||| ||||||||||||||| |||||||||||    
T  15277104 ttttatggcattgagtaattttttgttttataagatttttgagggacaaaatg-ctattttgttcttttagacaacttgtacgtgggaaaaaaagttgtg 15277006  T
Q  225 atgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    ||||||||||||||||||||||||||||||||||||||    
T  15277005 atgtggtttggtgagggacaaaaatatgagtttttgtc 15276968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 179 - 262
Target Start/End: Original strand, 18057534 - 18057617
Alignment:
Q  179 ctatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    ||||||| |||||| ||| ||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||    
T  18057534 ctattttggtattttagacaacttgtacgtgggacaaaaagttgtactgtggtttggtgagggacaaaaatatgagtttttgtc 18057617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 179 - 262
Target Start/End: Complemental strand, 32409966 - 32409883
Alignment:
Q  179 ctatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    ||||||| |||||| ||| |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32409966 ctattttggtattttagacaacttgtgagtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 32409883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 125 - 262
Target Start/End: Original strand, 34176792 - 34176928
Alignment:
Q  125 ttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaaagttgtg 224  Q
    |||||| |||||||||||||||| || ||||||||||||||  ||||       ||||||| |||||| |||  ||||||||||||||||||||||||||    
T  34176792 ttttatggcattgagtaattttttgttttatacgatttttgagggacaaaatg-ctattttggtattttagactacttgtacgtgggacaaaaagttgtg 34176890  T
Q  225 atgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
     |||| ||||||||| ||||||||||||||||||||||    
T  34176891 ctgtgatttggtgagagacaaaaatatgagtttttgtc 34176928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 107 - 262
Target Start/End: Original strand, 10485101 - 10485255
Alignment:
Q  107 aaacaatacaagacaaacttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtac 206  Q
    |||||| ||| ||||||  |||||  |||||| |||||||| || ||||||||||||||| ||||       |||||||  ||||| ||| |||||||||    
T  10485101 aaacaacacaggacaaatatttatgacattgaataattttttgttttatacgatttttgggggacaaaatg-ctattttgatattttagacaacttgtac 10485199  T
Q  207 gtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    |||||||||||||||||| ||||||||| |||||||||||||||| ||||||||||    
T  10485200 gtgggacaaaaagttgtgctgtggtttgctgagggacaaaaatatcagtttttgtc 10485255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 179 - 262
Target Start/End: Complemental strand, 14925570 - 14925487
Alignment:
Q  179 ctatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    ||||||| |||||| ||| |||||||| |||||||||||||||||  |||||||||||||||||||||||||||||||||||||    
T  14925570 ctattttggtattttagacaacttgtaagtgggacaaaaagttgtactgtggtttggtgagggacaaaaatatgagtttttgtc 14925487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 179 - 262
Target Start/End: Original strand, 17443277 - 17443360
Alignment:
Q  179 ctatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    ||||||| |||||| ||| ||||||||||||||||||||||||||  ||||||||||||||||| |||||||||||||||||||    
T  17443277 ctattttggtattttagacaacttgtacgtgggacaaaaagttgtactgtggtttggtgagggataaaaatatgagtttttgtc 17443360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 108 - 245
Target Start/End: Complemental strand, 27824834 - 27824698
Alignment:
Q  108 aacaatacaagacaaacttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacg 207  Q
    ||||||||| ||||||||||||| | ||||| ||||||||| ||||||| |||||||| |||||       ||||||||||||||  ||||||| |||||    
T  27824834 aacaatacatgacaaacttttatggtattgaataatttttgatcttatatgatttttgttggacaaaaag-ctatttttgtattttggataactcgtacg 27824736  T
Q  208 tgggacaaaaagttgtgatgtggtttggtgagggacaa 245  Q
    |||||||||||||||||||||||| |  ||||||||||    
T  27824735 tgggacaaaaagttgtgatgtggtataatgagggacaa 27824698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 187 - 259
Target Start/End: Complemental strand, 4494221 - 4494149
Alignment:
Q  187 gtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagttttt 259  Q
    |||||| ||| ||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  4494221 gtattttagacaacttgtacgtgggacaaaaagttgtactgtggtttggtgagggacaaaaatatgagttttt 4494149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 180 - 262
Target Start/End: Complemental strand, 9902771 - 9902689
Alignment:
Q  180 tatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    |||||| |||||| ||| ||||||||||||||||||||||||||| ||||||||  |||||||||||||||| ||||||||||    
T  9902771 tattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttaatgagggacaaaaatatcagtttttgtc 9902689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 179 - 262
Target Start/End: Original strand, 11382079 - 11382160
Alignment:
Q  179 ctatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    ||||||| |||||| ||| |||||||||||| |||||||||||||| |||||||||||||  ||||||||||||||||||||||    
T  11382079 ctattttggtattttagacaacttgtacgtgagacaaaaagttgtgttgtggtttggtga--gacaaaaatatgagtttttgtc 11382160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 179 - 262
Target Start/End: Original strand, 3379725 - 3379808
Alignment:
Q  179 ctatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    ||||||| |||||||||| |||||||| ||| |||||||||||||| | |||||||||||| ||||||||||| ||||||||||    
T  3379725 ctattttggtatttaagacaacttgtatgtgagacaaaaagttgtgctatggtttggtgagcgacaaaaatatcagtttttgtc 3379808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 136 - 262
Target Start/End: Complemental strand, 34684140 - 34684016
Alignment:
Q  136 tgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtattta-agataacttgtacgtgggacaaaaagttgtgatgtggtttg 234  Q
    |||||||||||| || ||||||||||||||| ||||       ||||||| ||||||  ||| ||||||||||||| ||||||||||||| |||||||||    
T  34684140 tgagtaattttttgttttatacgatttttggaggacaaaatg-ctattttggtatttttagacaacttgtacgtggaacaaaaagttgtgttgtggtttg 34684042  T
Q  235 gtgagggacaaaaatatgagtttttgtc 262  Q
    |||||||||||||  |||||||||||||    
T  34684041 gtgagggacaaaa--atgagtttttgtc 34684016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 179 - 262
Target Start/End: Original strand, 3290687 - 3290768
Alignment:
Q  179 ctatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    ||||||| |||||| ||| ||||| |||||||||  |||||||||| ||||||||||| |||||||||||||||||||||||||    
T  3290687 ctattttggtattttagacaacttatacgtggga--aaaagttgtgttgtggtttggtaagggacaaaaatatgagtttttgtc 3290768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 180 - 251
Target Start/End: Complemental strand, 8177994 - 8177923
Alignment:
Q  180 tatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatat 251  Q
    |||||| |||||| ||| |||||| |||||||||||||||||||| ||||||||||| ||||||||||||||    
T  8177994 tattttggtattttagacaacttgaacgtgggacaaaaagttgtgttgtggtttggtaagggacaaaaatat 8177923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 183 - 262
Target Start/End: Original strand, 29054375 - 29054454
Alignment:
Q  183 ttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    |||||||||| ||| |||||||||||| |||||||||||||| |||||||||| |||||||||||||   ||||||||||    
T  29054375 ttttgtattttagacaacttgtacgtgagacaaaaagttgtgctgtggtttggcgagggacaaaaattgtagtttttgtc 29054454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 179 - 245
Target Start/End: Complemental strand, 7396239 - 7396173
Alignment:
Q  179 ctatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaa 245  Q
    |||||||||||||| |||||||||||||||| ||||||||||||||  ||||||| |||||||||||    
T  7396239 ctatttttgtattttagataacttgtacgtgagacaaaaagttgtgtagtggtttagtgagggacaa 7396173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 180 - 262
Target Start/End: Original strand, 11212273 - 11212355
Alignment:
Q  180 tatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    |||||| |||||| ||| |||||| ||||| ||||||| ||| || |||||||||||||||||||||| ||||||||||||||    
T  11212273 tattttggtattttagacaacttgcacgtgagacaaaaggttatgttgtggtttggtgagggacaaaagtatgagtttttgtc 11212355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 116 - 247
Target Start/End: Complemental strand, 29424743 - 29424613
Alignment:
Q  116 aagacaaacttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaa 215  Q
    ||||| ||||||||| | ||||| |||||||||||||| |||| ||||||||||||       |||||||||||||| ||||||||||||||| || | |    
T  29424743 aagacgaacttttatggtattgaataatttttggtcttgtacgttttttggtggacaaaaaa-ctatttttgtattttagataacttgtacgtaggtcta 29424645  T
Q  216 aaagttgtgatgtggtttggtgagggacaaaa 247  Q
    ||| ||||| ||| |||| |||| ||||||||    
T  29424644 aaaattgtgttgtcgtttagtgatggacaaaa 29424613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 198 - 262
Target Start/End: Complemental strand, 18597253 - 18597189
Alignment:
Q  198 aacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    ||||| ||||||||||||||||||||| |||||||||||||||||||||||| | || |||||||    
T  18597253 aacttatacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatttcagattttgtc 18597189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 204 - 251
Target Start/End: Complemental strand, 14808090 - 14808043
Alignment:
Q  204 tacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatat 251  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||    
T  14808090 tacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatat 14808043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 200 - 262
Target Start/End: Complemental strand, 11675467 - 11675405
Alignment:
Q  200 cttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    ||||||||||||| ||||||||||| | |||||||||||| ||||||||||| ||||||||||    
T  11675467 cttgtacgtgggataaaaagttgtgttatggtttggtgagagacaaaaatatcagtttttgtc 11675405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 180 - 249
Target Start/End: Original strand, 32860067 - 32860136
Alignment:
Q  180 tatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaat 249  Q
    ||||||||||||| ||| |||||||||||| ||||||| |||||| |||||||||| || ||||||||||    
T  32860067 tatttttgtattttagaaaacttgtacgtgagacaaaaggttgtgctgtggtttggcgatggacaaaaat 32860136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 105 - 171
Target Start/End: Original strand, 28068753 - 28068819
Alignment:
Q  105 caaaacaatacaagacaaacttttatagcattgagtaatttttggtcttatacgatttttggtggac 171  Q
    |||||||| | |||| |||||||||||| ||||  |||||||||||||||||| | |||||||||||    
T  28068753 caaaacaacataagagaaacttttatagtattgtataatttttggtcttataccacttttggtggac 28068819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 118 - 171
Target Start/End: Complemental strand, 32614112 - 32614059
Alignment:
Q  118 gacaaacttttatagcattgagtaatttttggtcttatacgatttttggtggac 171  Q
    ||||||||||||| | |||   ||||||||||||||||||||||||||||||||    
T  32614112 gacaaacttttatggtattatataatttttggtcttatacgatttttggtggac 32614059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 171
Target Start/End: Original strand, 10552710 - 10552785
Alignment:
Q  98 cacaagacaaaacaatacaagacaaacttttatagcat--tgagtaatttttggtcttatacgatttttggtggac 171  Q
    |||||||||||| || | |||||||||||||||   ||  ||| ||||||||| ||||||||||||||||||||||    
T  10552710 cacaagacaaaataacataagacaaacttttatgatatattgaataatttttgatcttatacgatttttggtggac 10552785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 210 - 249
Target Start/End: Original strand, 13415781 - 13415820
Alignment:
Q  210 ggacaaaaagttgtgatgtggtttggtgagggacaaaaat 249  Q
    ||||||||||||| |||||||||| |||||||||||||||    
T  13415781 ggacaaaaagttgcgatgtggtttagtgagggacaaaaat 13415820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 196 - 259
Target Start/End: Original strand, 23636255 - 23636318
Alignment:
Q  196 ataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagttttt 259  Q
    |||||||||||||| |||||||| ||||| ||||||||  |||   ||||||||||||||||||    
T  23636255 ataacttgtacgtgagacaaaaatttgtgttgtggtttaatgaataacaaaaatatgagttttt 23636318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 179 - 262
Target Start/End: Complemental strand, 35004242 - 35004159
Alignment:
Q  179 ctatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    |||||||  ||||| ||| ||||||||||||||||||| ||||||| |||||||   |||| ||||||||  | ||||||||||    
T  35004242 ctattttgatattttagaaaacttgtacgtgggacaaagagttgtgttgtggttatatgagagacaaaaaatttagtttttgtc 35004159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 74
Target Start/End: Complemental strand, 8342829 - 8342783
Alignment:
Q  28 agtatatactagacaaaacatcacaagacaaaacaacacaatacaaa 74  Q
    ||||| |||||||||| ||| ||||||| ||||||||||||||||||    
T  8342829 agtatgtactagacaatacaacacaagaaaaaacaacacaatacaaa 8342783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 201 - 242
Target Start/End: Complemental strand, 9200480 - 9200439
Alignment:
Q  201 ttgtacgtgggacaaaaagttgtgatgtggtttggtgaggga 242  Q
    ||||| ||||||||||||||||| || |||||||||||||||    
T  9200480 ttgtatgtgggacaaaaagttgttatatggtttggtgaggga 9200439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 73; Significance: 2e-33; HSPs: 52)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 125 - 262
Target Start/End: Original strand, 17540676 - 17540813
Alignment:
Q  125 ttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttg-tatttaagataacttgtacgtgggacaaaaagttgt 223  Q
    |||||| |||||||||||||||| || ||||||||||||||  ||||       ||||||||| ||||| ||| ||||||||||||||||||||||||||    
T  17540676 ttttatggcattgagtaattttttgttttatacgatttttgagggacaaaata-ctatttttggtattttagacaacttgtacgtgggacaaaaagttgt 17540774  T
Q  224 gatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    | |||||||||||||||||||||||||||||||||||||    
T  17540775 gctgtggtttggtgagggacaaaaatatgagtttttgtc 17540813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 125 - 262
Target Start/End: Original strand, 32497877 - 32498013
Alignment:
Q  125 ttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaaagttgtg 224  Q
    |||||| |||||||||||||||| || ||||||||||||||  ||||        |||||| |||||| ||| |||||||||||||||||||||||||||    
T  32497877 ttttatggcattgagtaattttttgttttatacgatttttgaaggacaaaatgt-tattttggtattttagacaacttgtacgtgggacaaaaagttgtg 32497975  T
Q  225 atgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    |||||||||||||||| |||||||||||||||||||||    
T  32497976 atgtggtttggtgaggtacaaaaatatgagtttttgtc 32498013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 125 - 262
Target Start/End: Complemental strand, 5278962 - 5278826
Alignment:
Q  125 ttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaaagttgtg 224  Q
    |||||| |||||||||||||||| || ||||||||||||||  ||||       ||||||| |||||| ||| ||||||||||||||||||||| |||||    
T  5278962 ttttatggcattgagtaattttttgttttatacgatttttgaaggacaaaatg-ctattttggtattttagacaacttgtacgtgggacaaaaaattgtg 5278864  T
Q  225 atgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
     |||||||||||||||||||||||||||||||||||||    
T  5278863 ctgtggtttggtgagggacaaaaatatgagtttttgtc 5278826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 125 - 262
Target Start/End: Complemental strand, 2645214 - 2645078
Alignment:
Q  125 ttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaaagttgtg 224  Q
    |||||| |||||||||||||||| || ||||||||||||||  |||        ||||||| |||||| ||| |||||||| ||||||||||||||||||    
T  2645214 ttttatggcattgagtaattttttgttttatacgatttttga-ggaacaaaatgctattttggtattttagacaacttgtatgtgggacaaaaagttgtg 2645116  T
Q  225 atgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
     |||||||||||||||||||||||||||||||||||||    
T  2645115 ctgtggtttggtgagggacaaaaatatgagtttttgtc 2645078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 125 - 262
Target Start/End: Original strand, 7258858 - 7258995
Alignment:
Q  125 ttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaaagttgtg 224  Q
    |||||| |||||||||||||||| || |||||| |||||||  ||||        |||||| |||||| ||| |||||||||||| ||||||||||||||    
T  7258858 ttttatggcattgagtaattttttgttttatacaatttttgagggacaaaaatgttattttggtattttagacaacttgtacgtgagacaaaaagttgtg 7258957  T
Q  225 atgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
     |||||||||||||||||||||||||||||||||||||    
T  7258958 ctgtggtttggtgagggacaaaaatatgagtttttgtc 7258995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 179 - 259
Target Start/End: Complemental strand, 30798564 - 30798484
Alignment:
Q  179 ctatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagttttt 259  Q
    ||||||| |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  30798564 ctattttggtattttagataacttgtacgtgggataaaaagttgtgatgtggtttggtgagggacaaaaatatgagttttt 30798484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 133 - 262
Target Start/End: Complemental strand, 7761693 - 7761565
Alignment:
Q  133 cattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtt 232  Q
    ||||||||||||||| || ||||||||||||||  ||||       ||||||| |||||| ||| |||||||||||| |||||||||||||| |||||||    
T  7761693 cattgagtaattttttgttttatacgatttttgagggacaaaatg-ctattttggtattttagacaacttgtacgtgagacaaaaagttgtgctgtggtt 7761595  T
Q  233 tggtgagggacaaaaatatgagtttttgtc 262  Q
    ||||||||||||||||||||||||||||||    
T  7761594 tggtgagggacaaaaatatgagtttttgtc 7761565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 125 - 262
Target Start/End: Complemental strand, 9733058 - 9732922
Alignment:
Q  125 ttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaaagttgtg 224  Q
    |||||| ||||||| |||||||| || ||||||||||||||  ||||       |||||||  ||||| ||| |||||||||||||||||||||||||||    
T  9733058 ttttatggcattgaataattttttgttttatacgatttttgagggacaaaatg-ctattttgatattttagacaacttgtacgtgggacaaaaagttgtg 9732960  T
Q  225 atgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
     |||||||||||||||||||||||||||||||||||||    
T  9732959 ttgtggtttggtgagggacaaaaatatgagtttttgtc 9732922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 125 - 262
Target Start/End: Original strand, 16104236 - 16104372
Alignment:
Q  125 ttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaaagttgtg 224  Q
    |||||| |||||||||||||||| || ||||||||||||||  ||||       ||||||| |||||| ||| || ||||||||| ||||||||||||||    
T  16104236 ttttatggcattgagtaattttttgttttatacgatttttgagggacaaaatg-ctattttggtattttagacaatttgtacgtgagacaaaaagttgtg 16104334  T
Q  225 atgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
     |||||||||||||||||||||||||||||||||||||    
T  16104335 ctgtggtttggtgagggacaaaaatatgagtttttgtc 16104372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 179 - 262
Target Start/End: Complemental strand, 19513764 - 19513681
Alignment:
Q  179 ctatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    ||||||| |||||| ||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  19513764 ctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttttgtc 19513681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 125 - 262
Target Start/End: Original strand, 34338772 - 34338908
Alignment:
Q  125 ttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaaagttgtg 224  Q
    |||||| |||||||||||||||| || ||||||||||||||  ||||       ||||||| |||||| ||| ||||||| |||||||||||||||||||    
T  34338772 ttttatggcattgagtaattttttgttttatacgatttttgagggacaaaatg-ctattttggtattttagacaacttgtgcgtgggacaaaaagttgtg 34338870  T
Q  225 atgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
     |||||||||||||||| ||||||||||||||||||||    
T  34338871 ctgtggtttggtgagggtcaaaaatatgagtttttgtc 34338908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 125 - 262
Target Start/End: Original strand, 35114747 - 35114883
Alignment:
Q  125 ttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaaagttgtg 224  Q
    |||||| ||| |||||||||||| || ||||||||||||||  ||||       ||||||| |||||| ||| ||||||||||||||||||||| |||||    
T  35114747 ttttatggcaatgagtaattttttgttttatacgatttttgagggacaaaatg-ctattttggtattttagacaacttgtacgtgggacaaaaaattgtg 35114845  T
Q  225 atgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
     |||||||||||||||||||||||||||||||||||||    
T  35114846 ttgtggtttggtgagggacaaaaatatgagtttttgtc 35114883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 91 - 262
Target Start/End: Original strand, 42706285 - 42706457
Alignment:
Q  91 aatacatcacaagacaaaacaatacaagacaaactttt-atagcattgagtaatttttg-gtcttatacgatttttggtggacnnnnnnnctatttttgt 188  Q
    |||||| ||||||||| ||||  ||| |||||| |||| || ||||||||||||||||  || ||||||||||||||  ||||       ||||||| ||    
T  42706285 aatacaacacaagacagaacagcacaggacaaattttttatggcattgagtaatttttttgttttatacgatttttgagggacaaaatg-ctattttggt 42706383  T
Q  189 atttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    |||| ||| |||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  42706384 attttagacaacttgtatgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtc 42706457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 98 - 262
Target Start/End: Original strand, 11114807 - 11114970
Alignment:
Q  98 cacaagacaaaacaatacaagacaaacttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagat 197  Q
    ||||||||| ||||||| |||| ||| |||||| ||||||| |||||||| || |||||||||| || | ||||       ||||||| | |||| |||     
T  11114807 cacaagacagaacaatataagaaaaatttttatggcattgaataatttttcgttttatacgattgttagcggacgaaata-ctattttggaattttagac 11114905  T
Q  198 aacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    ||||||| ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  11114906 aacttgtgcgtgggacaaaaagttgtgatgtggtttggtgaggaacaaaaatatgattttttgtc 11114970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 180 - 262
Target Start/End: Original strand, 33889259 - 33889341
Alignment:
Q  180 tatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    |||||| |||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  33889259 tattttggtattttagacaacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggaaaaaaatatgagtttttgtc 33889341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 179 - 262
Target Start/End: Original strand, 9717239 - 9717322
Alignment:
Q  179 ctatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    ||||||| |||||| ||| ||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||    
T  9717239 ctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaacatgagtttttgtc 9717322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 179 - 262
Target Start/End: Original strand, 37308670 - 37308753
Alignment:
Q  179 ctatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    ||||||| |||||| ||| || |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  37308670 ctattttggtattttagacaatttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtc 37308753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 125 - 262
Target Start/End: Original strand, 44284591 - 44284727
Alignment:
Q  125 ttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaaagttgtg 224  Q
    |||||| |||||||||||||||| || ||||||||||||||  ||||       |||||||  ||||| ||| |||||||||||| ||||||||||||||    
T  44284591 ttttatggcattgagtaattttttgttttatacgatttttgagggacaaaatg-ctattttgttattttagacaacttgtacgtgagacaaaaagttgtg 44284689  T
Q  225 atgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
     |||||||| ||||||||||||||||||||||||||||    
T  44284690 ctgtggtttagtgagggacaaaaatatgagtttttgtc 44284727  T

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Target: chr2; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 180 - 262
Target Start/End: Original strand, 26418939 - 26419021
Alignment:
Q  180 tatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    |||||| |||||| ||| ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||    
T  26418939 tattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgaggaacaaaaatatgagtttttgtc 26419021  T

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Target: chr2; HSP #20
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 93 - 262
Target Start/End: Original strand, 18685765 - 18685934
Alignment:
Q  93 tacatcacaagacaaaacaatacaagacaaactttt-atagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatt 191  Q
    |||| ||||||||| ||||  ||| |||||| |||| || |||||||||||||||| || ||||| ||||||||  ||||        ||||||  ||||    
T  18685765 tacaacacaagacagaacagcacaggacaaattttttatggcattgagtaattttttgttttataggatttttgagggacaaaatgt-tattttaatatt 18685863  T
Q  192 taagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    | ||| ||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||    
T  18685864 ttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagagacaaaaatatgagtttttgtc 18685934  T

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Target: chr2; HSP #21
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 180 - 261
Target Start/End: Complemental strand, 37003942 - 37003861
Alignment:
Q  180 tatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgt 261  Q
    |||||| |||||| ||| || |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  37003942 tattttggtattttagacaatttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttgt 37003861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 133 - 262
Target Start/End: Complemental strand, 12672594 - 12672466
Alignment:
Q  133 cattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtt 232  Q
    ||||||||||||||| || ||||||||||||||| ||||       ||||||| |||||| ||| ||||||||| ||||| ||||| ||||| |||||||    
T  12672594 cattgagtaattttttgttttatacgatttttggaggacaaaatg-ctattttggtattttagacaacttgtacttgggataaaaacttgtgttgtggtt 12672496  T
Q  233 tggtgagggacaaaaatatgagtttttgtc 262  Q
    |||||||||||||||||||||| |||||||    
T  12672495 tggtgagggacaaaaatatgagattttgtc 12672466  T

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Target: chr2; HSP #23
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 179 - 262
Target Start/End: Complemental strand, 28824632 - 28824549
Alignment:
Q  179 ctatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    ||||||| |||||| ||| |||||| ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||    
T  28824632 ctattttagtattttagacaacttgcacgtgagataaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 28824549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 108 - 262
Target Start/End: Complemental strand, 32766650 - 32766496
Alignment:
Q  108 aacaatacaagacaaacttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacg 207  Q
    ||||| ||| |||||| |||||| ||||||| |||||||| || ||||||||||||||| ||||        |||||| |||||| ||| ||| ||||||    
T  32766650 aacaacacaggacaaatttttatggcattgaataattttttgttttatacgatttttggaggacgaaatgt-tattttggtattttagacaacctgtacg 32766552  T
Q  208 tgggacaaaaa-gttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    | ||||||||| |||||| |||||||||||||||||||||||||| ||||||||||    
T  32766551 taggacaaaaaagttgtgttgtggtttggtgagggacaaaaatatcagtttttgtc 32766496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 125 - 262
Target Start/End: Complemental strand, 3913588 - 3913452
Alignment:
Q  125 ttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaaagttgtg 224  Q
    |||||| ||||||| |||| ||| || ||||||||||||||| |||        ||||||| |||||| ||| ||||||||||||| |||||||||||||    
T  3913588 ttttatggcattgaataatattttgttttatacgatttttgg-ggagcaaaatgctattttggtattttagacaacttgtacgtggaacaaaaagttgtg 3913490  T
Q  225 atgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
     ||||||||||||||||||||| || ||||||||||||    
T  3913489 ttgtggtttggtgagggacaaacatgtgagtttttgtc 3913452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 98 - 262
Target Start/End: Complemental strand, 16178036 - 16177875
Alignment:
Q  98 cacaagacaaaacaatacaagacaaacttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagat 197  Q
    ||||||| | ||||| ||| |||||| |||||||||||||| |||||||  || ||||||||||||||| ||||       | ||||| |||||| |||     
T  16178036 cacaagatagaacaacacacgacaaatttttatagcattgaataatttt--gttttatacgatttttgggggacgaaattcc-attttggtattttagac 16177940  T
Q  198 aacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    |||||||||||| |||||||||||||| ||||||||||| || ||||||||||| ||||| ||||    
T  16177939 aacttgtacgtgagacaaaaagttgtgttgtggtttggtaagcgacaaaaatatcagtttatgtc 16177875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 125 - 262
Target Start/End: Original strand, 33366572 - 33366708
Alignment:
Q  125 ttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaaagttgtg 224  Q
    |||||| ||||||| |||||||| || ||||||||||||||  ||||        |||||| |||||| ||| |||||||| |||||| |||||||||||    
T  33366572 ttttatggcattgaataattttttgttttatacgatttttgagggacaaaatgt-tattttggtattttagacaacttgtatgtgggagaaaaagttgtg 33366670  T
Q  225 atgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
     ||||||||||||||| |||||||||||||||||||||    
T  33366671 ttgtggtttggtgaggaacaaaaatatgagtttttgtc 33366708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 188 - 262
Target Start/End: Original strand, 1247171 - 1247245
Alignment:
Q  188 tatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    ||||| ||| |||||||||||||||||||||||||||  |||||||||||||||||||||||||||| |||||||    
T  1247171 tattttagacaacttgtacgtgggacaaaaagttgtgcagtggtttggtgagggacaaaaatatgagattttgtc 1247245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 188 - 262
Target Start/End: Original strand, 40692321 - 40692395
Alignment:
Q  188 tatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    ||||| ||| ||||||||||||||||||||||||||  ||||||||||||||||||||||||| |||||||||||    
T  40692321 tattttagacaacttgtacgtgggacaaaaagttgttctgtggtttggtgagggacaaaaatacgagtttttgtc 40692395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 182 - 262
Target Start/End: Complemental strand, 26981781 - 26981701
Alignment:
Q  182 tttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    |||| |||||| ||| ||||||||||| | |||||||||| || |||||||||||||||||||||||||||||||||||||    
T  26981781 ttttggtattttagacaacttgtacgtagaacaaaaagttttgttgtggtttggtgagggacaaaaatatgagtttttgtc 26981701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 125 - 261
Target Start/End: Original strand, 4641478 - 4641613
Alignment:
Q  125 ttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaaagttgtg 224  Q
    ||||||| ||||||||||||||| || ||||||||||||||  |||        ||||||| |||||| | | |||||||| ||| ||||||||||||||    
T  4641478 ttttataccattgagtaattttttgttttatacgatttttga-ggaacaaaatgctattttggtattttaaacaacttgtatgtgagacaaaaagttgtg 4641576  T
Q  225 atgtggtttggtgagggacaaaaatatgagtttttgt 261  Q
     |||||||||||||| ||||||||||||| |||||||    
T  4641577 ctgtggtttggtgagagacaaaaatatgaatttttgt 4641613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 125 - 262
Target Start/End: Complemental strand, 30326459 - 30326324
Alignment:
Q  125 ttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaaagttgtg 224  Q
    |||||| | |||||||||||||| || ||||||||||||||  ||||       ||||||| |||||| ||| |||||||||||| ||||||||||||||    
T  30326459 ttttatggaattgagtaattttttgttttatacgatttttgagggacaaaata-ctattttggtattttagacaacttgtacgtgagacaaaaagttgtg 30326361  T
Q  225 atgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
     |||||||||| ||| ||| ||||||||||||||||||    
T  30326360 ctgtggtttggcgagagac-aaaatatgagtttttgtc 30326324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 179 - 262
Target Start/End: Complemental strand, 40832544 - 40832461
Alignment:
Q  179 ctatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    ||||||| |||||| |||  ||||||||||| |||||||||||||| ||||||||||||||||||||||||||  |||||||||    
T  40832544 ctattttggtattttagactacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacaaaaatatccgtttttgtc 40832461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 93 - 261
Target Start/End: Original strand, 2086001 - 2086169
Alignment:
Q  93 tacatcacaagacaaaacaatacaagacaaactttt-atagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatt 191  Q
    |||| |||||| || ||||| ||| |||||| |||| ||  ||||||||||||||| || ||||||||||||||  ||||        |||||| |||||    
T  2086001 tacaacacaaggcagaacaacacatgacaaattttttatgccattgagtaattttttgttttatacgatttttgagggacaaaatgt-tattttggtatt 2086099  T
Q  192 taagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgt 261  Q
    | ||| ||||||||||||  ||||||||||||  ||||||||||  ||||||||||||||||||||||||    
T  2086100 tcagacaacttgtacgtgaaacaaaaagttgtactgtggtttgggtagggacaaaaatatgagtttttgt 2086169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 179 - 259
Target Start/End: Original strand, 6896183 - 6896263
Alignment:
Q  179 ctatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagttttt 259  Q
    ||||||| || ||| ||| ||||||||||||||||||||||||||| ||| |||||||||||||||||||| | |||||||    
T  6896183 ctattttggtgttttagacaacttgtacgtgggacaaaaagttgtgctgttgtttggtgagggacaaaaatttcagttttt 6896263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 198 - 262
Target Start/End: Complemental strand, 38623360 - 38623296
Alignment:
Q  198 aacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    |||||||| |||||||||||||||||| |||||||||||||||||||||||| | ||||||||||    
T  38623360 aacttgtatgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatttcagtttttgtc 38623296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 179 - 262
Target Start/End: Complemental strand, 38993146 - 38993063
Alignment:
Q  179 ctatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    |||||||||||||| ||| ||||||||||||||||||||||||||| |||||||||  |||| ||||||||   ||||||||||    
T  38993146 ctatttttgtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttgacgaggaacaaaaattgtagtttttgtc 38993063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 180 - 262
Target Start/End: Complemental strand, 12939374 - 12939292
Alignment:
Q  180 tatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    |||||| |||| | ||| |||||||||||| || ||||||||||| ||||||||||||| |||||||||||| ||||||||||    
T  12939374 tattttggtatcttagacaacttgtacgtgagataaaaagttgtgctgtggtttggtgaaggacaaaaatatcagtttttgtc 12939292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 180 - 262
Target Start/End: Original strand, 13829454 - 13829536
Alignment:
Q  180 tatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    |||||| || ||| ||||||||||||| |||||||||||||||||||||||| | |||| |||||||||| | ||||||||||    
T  13829454 tattttggtgttttagataacttgtacctgggacaaaaagttgtgatgtggtctagtgatggacaaaaatttcagtttttgtc 13829536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 180 - 262
Target Start/End: Complemental strand, 41366184 - 41366102
Alignment:
Q  180 tatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    |||||| |||||| ||| |||||||| ||| |||||||| ||||| |||||||||||||||||||||||| | ||||||||||    
T  41366184 tattttggtattttagacaacttgtatgtgagacaaaaaattgtgttgtggtttggtgagggacaaaaatttcagtttttgtc 41366102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 93 - 262
Target Start/End: Original strand, 42365506 - 42365675
Alignment:
Q  93 tacatcacaagacaaaacaatacaagacaaactttt-atagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatt 191  Q
    |||| |||||| || ||||| |||||| ||| |||| || |||||||||||||||| || ||||| ||||||| | ||||        |||||| |||||    
T  42365506 tacaacacaaggcagaacaacacaagataaattttttatggcattgagtaattttttgttttatatgatttttaggggacaaaatgt-tattttggtatt 42365604  T
Q  192 taagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    | ||| ||||||| ||||  | ||||||||||| ||||||||| ||| |||||||||||||||||||||||    
T  42365605 ttagacaacttgtccgtgatataaaaagttgtgttgtggtttgatgaaggacaaaaatatgagtttttgtc 42365675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 125 - 262
Target Start/End: Complemental strand, 10399998 - 10399862
Alignment:
Q  125 ttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaaagttgtg 224  Q
    |||||| ||||||| |||||||| || |||||||| |||||| ||||       ||||||| |  ||| ||| ||||| ||| || ||||||||||||||    
T  10399998 ttttatggcattgaataattttttgttttatacgacttttgggggacaaaatg-ctattttggatttttagacaacttatacatgagacaaaaagttgtg 10399900  T
Q  225 atgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
     |||||||| |||| |||||||||||||||||||||||    
T  10399899 ttgtggtttagtgaaggacaaaaatatgagtttttgtc 10399862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 212 - 261
Target Start/End: Original strand, 8112348 - 8112397
Alignment:
Q  212 acaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgt 261  Q
    ||||||||||||| |||||||||||||| |||||||||||||||||||||    
T  8112348 acaaaaagttgtgttgtggtttggtgagagacaaaaatatgagtttttgt 8112397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 121 - 262
Target Start/End: Original strand, 1230869 - 1231009
Alignment:
Q  121 aaacttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaaagt 220  Q
    ||||||||||   ||||| |||||||||||| ||||| ||| |||||||||        ||||||||||||| || ||| |||||| || ||||||||||    
T  1230869 aaacttttattatattgaataatttttggtcatatactattgttggtggacaaaaaga-tatttttgtattttaggtaatttgtacatgagacaaaaagt 1230967  T
Q  221 tgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    || |||||||||| ||||  |||||||| |  ||||||||||    
T  1230968 tgagatgtggtttagtgaaagacaaaaagaatagtttttgtc 1231009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 108 - 249
Target Start/End: Original strand, 26796174 - 26796313
Alignment:
Q  108 aacaatacaagacaaacttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacg 207  Q
    ||||| |||||||||||| || | | |||||||| |||| | ||||||| ||||||||||||||       ||||||  |||||| ||| ||||||||||    
T  26796174 aacaacacaagacaaactattctggtattgagtatttttggctcttatatgatttttggtggacaaaaga-ctatttg-gtattttagacaacttgtacg 26796271  T
Q  208 tgggacaaaaagttgtgatgtggtttggtgagggacaaaaat 249  Q
    || |||||||||||| | |||| ||| |||||||||| ||||    
T  26796272 tgtgacaaaaagttgcgttgtgctttagtgagggacacaaat 26796313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 180 - 262
Target Start/End: Original strand, 41934597 - 41934679
Alignment:
Q  180 tatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    |||||| |||||| ||| ||||| ||||| ||||||||||||||| |||||||| |||| | |||| ||| | ||||||||||    
T  41934597 tattttggtattttagacaacttatacgtaggacaaaaagttgtgttgtggtttagtgaagtacaagaatttcagtttttgtc 41934679  T

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Target: chr2; HSP #47
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 202 - 252
Target Start/End: Complemental strand, 45463162 - 45463112
Alignment:
Q  202 tgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatg 252  Q
    |||||||  |||||||||||||| |||||||||||||| ||||||||||||    
T  45463162 tgtacgtatgacaaaaagttgtgttgtggtttggtgagtgacaaaaatatg 45463112  T

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Target: chr2; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 214 - 250
Target Start/End: Complemental strand, 27462842 - 27462806
Alignment:
Q  214 aaaaagttgtgatgtggtttggtgagggacaaaaata 250  Q
    ||||||||||| |||||||||||||||||||||||||    
T  27462842 aaaaagttgtgttgtggtttggtgagggacaaaaata 27462806  T

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Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 183 - 262
Target Start/End: Original strand, 36843481 - 36843560
Alignment:
Q  183 ttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    |||||||||| |||||| || |||||||||||||| ||  |  ||||||||||||||||||| |||| |  |||||||||    
T  36843481 ttttgtattttagataaattatacgtgggacaaaaggtgattttgtggtttggtgagggacacaaatttcggtttttgtc 36843560  T

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Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 113 - 166
Target Start/End: Original strand, 1247105 - 1247158
Alignment:
Q  113 tacaagacaaacttttatagcattgagtaatttttggtcttatacgatttttgg 166  Q
    ||||||||||| |||||| ||||||| ||||||||  | |||||||||||||||    
T  1247105 tacaagacaaatttttatggcattgaataattttttattttatacgatttttgg 1247158  T

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Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 180 - 262
Target Start/End: Original strand, 30712872 - 30712958
Alignment:
Q  180 tatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtgg----tttggtgagggacaaaaatatgagtttttgtc 262  Q
    |||||| || ||| ||| ||||| ||||||||| ||||||||||| |||||    ||||||||||||||||||| | ||||| ||||    
T  30712872 tattttggtgttttagacaacttctacgtgggataaaaagttgtgttgtggttaatttggtgagggacaaaaatttcagtttgtgtc 30712958  T

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Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 261
Target Start/End: Original strand, 18278939 - 18278999
Alignment:
Q  201 ttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgt 261  Q
    ||||| ||| ||||||||||||||| ||| ||| |||||| |||||||| | |||||||||    
T  18278939 ttgtatgtgagacaaaaagttgtgacgtgatttagtgaggaacaaaaattttagtttttgt 18278999  T

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Target: scaffold0054 (Bit Score: 69; Significance: 5e-31; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 125 - 262
Target Start/End: Original strand, 23539 - 23673
Alignment:
Q  125 ttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaaagttgtg 224  Q
    |||||| |||||||||||||||| || ||||||||||||||  ||||        |||||| |||||| ||| |||||||||||||||||||||||||||    
T  23539 ttttatggcattgagtaattttttgttttatacgatttttgagggacaatgt---tattttggtattttagacaacttgtacgtgggacaaaaagttgtg 23635  T
Q  225 atgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
     ||||||||||||| |||||||||||||||||||||||    
T  23636 ctgtggtttggtgaaggacaaaaatatgagtttttgtc 23673  T

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Target: scaffold0004 (Bit Score: 69; Significance: 5e-31; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 125 - 262
Target Start/End: Complemental strand, 373098 - 372962
Alignment:
Q  125 ttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaaagttgtg 224  Q
    |||||| |||||||||||||||| || ||||||||||||||  ||||        |||||| |||||| ||| |||||||||||||||||||||||||||    
T  373098 ttttatggcattgagtaattttttgttttatacgatttttgagggacaaaatga-tattttggtattttagacaacttgtacgtgggacaaaaagttgtg 373000  T
Q  225 atgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
     | |||||||||||||||||||||||||||||||||||    
T  372999 ttatggtttggtgagggacaaaaatatgagtttttgtc 372962  T

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Target: scaffold0208 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0208
Description:

Target: scaffold0208; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 179 - 262
Target Start/End: Complemental strand, 2419 - 2336
Alignment:
Q  179 ctatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    ||||||| |||||| ||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  2419 ctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttttgtc 2336  T

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Target: scaffold0181 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 125 - 258
Target Start/End: Complemental strand, 19224 - 19092
Alignment:
Q  125 ttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaaagttgtg 224  Q
    |||||| |||||||||||||||| || ||||||||||||||  ||||        |||||| |||||| ||| |||||||||||||||||||||||||||    
T  19224 ttttatggcattgagtaattttttgttttatacgatttttgaaggacaaaatgt-tattttggtattttagacaacttgtacgtgggacaaaaagttgtg 19126  T
Q  225 atgtggtttggtgagggacaaaaatatgagtttt 258  Q
     |||| ||||||||||||||||||||||||||||    
T  19125 ctgtgatttggtgagggacaaaaatatgagtttt 19092  T

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Target: scaffold0360 (Bit Score: 64; Significance: 5e-28; HSPs: 1)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 179 - 262
Target Start/End: Complemental strand, 15462 - 15379
Alignment:
Q  179 ctatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    ||||||| |||||| ||| ||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  15462 ctattttggtattttagacaacttgtacatgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtc 15379  T

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Target: scaffold0098 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 99 - 262
Target Start/End: Original strand, 51374 - 51536
Alignment:
Q  99 acaagacaaaacaatacaagacaaactttt-atagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagat 197  Q
    |||||||| ||||  |||||||||| |||| ||  ||||||||||||||| || ||||||||||||||  ||||       |||||||  ||||| |||     
T  51374 acaagacagaacagcacaagacaaattttttatgacattgagtaattttttgttttatacgatttttgagggacaaaatg-ctattttgatattttagac 51472  T
Q  198 aacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    ||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||    
T  51473 aacttgtacgtgggacaaaaagttgtgctgtggttt-gtgagggacaaaaatatgagtttttgtc 51536  T

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Target: scaffold0027 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 126 - 262
Target Start/End: Original strand, 15135 - 15270
Alignment:
Q  126 tttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaaagttgtga 225  Q
    ||||| |||||||||||||| | || ||||| ||||||||| ||||       ||||||| |||||| ||| |||||||||||| ||||||||||||||     
T  15135 tttatggcattgagtaatttgttgttttataagatttttgggggacaaaata-ctattttagtattttagacaacttgtacgtgagacaaaaagttgtgt 15233  T
Q  226 tgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    |||||||||||| ||||||||||||||||||||||||    
T  15234 tgtggtttggtgggggacaaaaatatgagtttttgtc 15270  T

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Target: scaffold0025 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 180 - 259
Target Start/End: Complemental strand, 5520 - 5441
Alignment:
Q  180 tatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagttttt 259  Q
    ||||||||||||| ||  |||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  5520 tatttttgtattttaggcaacttgtatgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgtgttttt 5441  T

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Target: scaffold0729 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0729
Description:

Target: scaffold0729; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 198 - 262
Target Start/End: Complemental strand, 4641 - 4577
Alignment:
Q  198 aacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    ||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  4641 aacttttacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtc 4577  T

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Target: scaffold0650 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 179 - 262
Target Start/End: Complemental strand, 1724 - 1641
Alignment:
Q  179 ctatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    ||||||| || ||| ||| ||||||||||||||||||||||||||| |||||||||||||||||||||||| | ||||||||||    
T  1724 ctattttggttttttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatttcagtttttgtc 1641  T

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Target: scaffold0280 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 179 - 262
Target Start/End: Complemental strand, 13768 - 13685
Alignment:
Q  179 ctatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    ||||||| || ||| ||| |||||||| |||||||||||||||||  |||||||||||||||||||||||| | ||||||||||    
T  13768 ctattttggtgttttagacaacttgtaagtgggacaaaaagttgtactgtggtttggtgagggacaaaaatttcagtttttgtc 13685  T

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Target: scaffold0957 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0957
Description:

Target: scaffold0957; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 134 - 262
Target Start/End: Complemental strand, 2620 - 2494
Alignment:
Q  134 attgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaaaaagttgtgatgtggttt 233  Q
    |||| ||||||||| || ||||||||||||||| ||||       ||||||| |||||| ||| |||||||||||| ||||| | |||||| ||||||||    
T  2620 attgggtaattttttgttttatacgatttttgggggacaaaatg-ctattttggtattttagacaacttgtacgtgagacaata-gttgtgttgtggttt 2523  T
Q  234 ggtgagggacaaaaatatgagtttttgtc 262  Q
    ||| ||||||||| |||||||||||||||    
T  2522 ggttagggacaaagatatgagtttttgtc 2494  T

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Target: scaffold0050 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 201 - 261
Target Start/End: Complemental strand, 43009 - 42949
Alignment:
Q  201 ttgtacgtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgt 261  Q
    |||||||||||||||||||||||| ||||||||||||||||||| |||| | |||||||||    
T  43009 ttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacacaaatttcagtttttgt 42949  T

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Target: scaffold0155 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 116 - 245
Target Start/End: Complemental strand, 33687 - 33559
Alignment:
Q  116 aagacaaacttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgggacaa 215  Q
    |||| ||||||||||   ||||| |||||||||||||||||| | ||||| |||||       ||||||| |||||| | | || |||||||||||||||    
T  33687 aagataaacttttatgatattgaataatttttggtcttatacaagttttgatggacaaaagc-ctattttggtattttatacaatttgtacgtgggacaa 33589  T
Q  216 aaagttgtgatgtggtttggtgagggacaa 245  Q
    ||||||||| ||||||||| ||||||||||    
T  33588 aaagttgtgttgtggtttgatgagggacaa 33559  T

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Target: scaffold0077 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 111 - 262
Target Start/End: Complemental strand, 7610 - 7456
Alignment:
Q  111 aatacaagacaaacttttatagcattgagtaatttttggtcttatacgatttttggtggacnnnnnnnctatttttgtatttaagataacttgtacgtgg 210  Q
    |||||||||||||||||||||| ||||| |||||||||||||||||  ||||||  |||||       ||||||| |||||| ||| |||| |||||||     
T  7610 aatacaagacaaacttttatagtattgaataatttttggtcttatataatttttaatggacaaaaaatctattttggtattttagacaactcgtacgtga 7511  T
Q  211 gacaaaaa---gttgtgatgtggtttggtgagggacaaaaatatgagtttttgtc 262  Q
    ||||||||    ||||| |||| ||| ||||| ||||| ||| | ||||||||||    
T  7510 gacaaaaaaatcttgtgttgtgatttagtgagagacaagaatttcagtttttgtc 7456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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