View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF8427_low_1 (Length: 655)
Name: NF8427_low_1
Description: NF8427
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8427_low_1 |
 | |
|
| [»] scaffold0511 (1 HSPs) |
| | |
|
| [»] scaffold0230 (1 HSPs) |
| | |
|
| [»] scaffold0133 (2 HSPs) |
| | |
|
| [»] scaffold0256 (1 HSPs) |
| | |
|
Alignment Details
Target: chr1 (Bit Score: 595; Significance: 0; HSPs: 2)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 595; E-Value: 0
Query Start/End: Original strand, 1 - 636
Target Start/End: Complemental strand, 7581767 - 7581132
Alignment:
| Q |
1 |
aatatgaagggtgctttttgacatatttgtcaaacatgcattctctaaaaccatacattcttgcaccactactgatcgagcaagatcatggatgagatca |
100 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7581767 |
aatatgatgggtgctttttgacatatttgtcaaacattcattctctaaaaccatacattcttgcaccactactgatcgagcaagatcatggatgagatca |
7581668 |
T |
|
| Q |
101 |
tgcattttgaaagaaatgtctcttgaatcatcatccatatgaatgtcttgaaagaaagacttttggcacaattcattccaaatcatgttgccaacatctt |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7581667 |
tgcattttgaaagaaatgtctcttgaatcatcatccatatgaatgtcttgaaagaaagacttttggcacaattcattccaaatcatgttgccaacatctt |
7581568 |
T |
|
| Q |
201 |
caacctccaaattttttctagatgaaataaattcattagccatccaaagatgaatcagttcttccttcatgatttttgtatctttaggaaatatagcaca |
300 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7581567 |
caacctccaaattttttctagatgaaataaattcattagccatccaaagatgaatcaattcttccttcatgatttttgtatctttaggaaatatagcaca |
7581468 |
T |
|
| Q |
301 |
aaaagcgaaacattgttttaaggttggtgataaatgaaagtagctcaacctcagagctggcaaagtagaattctcatgcggtaaatcccaaagctcgctc |
400 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7581467 |
aaaagcgaaacattgttttaaggttggtgataaatgaaagtagctcaatctcagagctggcaaagtagaattctcatgcggtaaatcccaaagctcgctc |
7581368 |
T |
|
| Q |
401 |
tctttaatttcaaaccattccttttcttcactccttgagtgcattagacaccccaatgcttgtgttgcaagaggcaatcccgcacannnnnnnactatct |
500 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||| |
|
|
| T |
7581367 |
tctttaatttcaaaccattccttttcttcactccttgagtgcattagacaccccaatgcttgtgctgcaagaggcaatcccgcacatttttttactatct |
7581268 |
T |
|
| Q |
501 |
ccttgcctattgccacaagctctgcactctcttctctatcatgtccaaatgcatattgtttgaacaataaccaacattcatcatcagagagaactgacaa |
600 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7581267 |
ccttgcctattgccacaagctctgcactctcttctctatcatgtccaaatgcatattgtttgaacaataaccaacattcatcatcagagagaactgacaa |
7581168 |
T |
|
| Q |
601 |
agaacgagttgagcatgttcccatgattgatgcaac |
636 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |
|
|
| T |
7581167 |
agaacgagttgagcatgttcccatgattgatgcaac |
7581132 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 391; E-Value: 0
Query Start/End: Original strand, 1 - 636
Target Start/End: Original strand, 7099479 - 7100114
Alignment:
| Q |
1 |
aatatgaagggtgctttttgacatatttgtcaaacatgcattctctaaaaccatacattcttgcaccactactgatcgagcaagatcatggatgagatca |
100 |
Q |
| |
|
||||||| | ||||||||||||| || |||| | ||||||| ||||||||||||||||||||| || |||||||| ||||||||||||||| ||||||| |
|
|
| T |
7099479 |
aatatgatgtgtgctttttgacaagttagtcacatatgcattatctaaaaccatacattcttgcccccctactgattgagcaagatcatggacgagatca |
7099578 |
T |
|
| Q |
101 |
tgcattttgaaagaaatgtctcttgaatcatcatccatatgaatgtcttgaaagaaagacttttggcacaattcattccaaatcatgttgccaacatctt |
200 |
Q |
| |
|
||||||||||||||||| ||||||||| |||||||||||| ||||||||||||||||| |||||| |||||||||||||||||||||| |||||||||| |
|
|
| T |
7099579 |
tgcattttgaaagaaatcactcttgaataatcatccatatggatgtcttgaaagaaagatttttggtacaattcattccaaatcatgtttccaacatctt |
7099678 |
T |
|
| Q |
201 |
caacctccaaattttttctagatgaaataaattcattagccatccaaagatgaatcagttcttccttcatgatttttgtatctttaggaaatatagcaca |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
7099679 |
caacctccaaattttttctagatgaaataaatccattagccatccaaagatgaatcaattcttccttcatgatttttgtatctttgcgaaatatagcaca |
7099778 |
T |
|
| Q |
301 |
aaaagcgaaacattgttttaaggttggtgataaatgaaagtagctcaacctcagagctggcaaagtagaattctcatgcggtaaatcccaaagctcgctc |
400 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||| |||||||||| ||||||||| |||| | ||| ||| |
|
|
| T |
7099779 |
aaaagcgaaacattgttttaaggttggtgataaatggaagtagctcaacctcaaagctggcaaaatagaattctcgtgcggtaaagcccagatctcactc |
7099878 |
T |
|
| Q |
401 |
tctttaatttcaaaccattccttttcttcactccttgagtgcattagacaccccaatgcttgtgttgcaagaggcaatcccgcacannnnnnnactatct |
500 |
Q |
| |
|
||||||||||| |||||| | ||||||||||| ||||| |||||||||||||| |||||||||| ||||||||||||||| |||| ||||||| |
|
|
| T |
7099879 |
tctttaatttctaaccatgctttttcttcacttcttgaatgcattagacaccctaatgcttgtgctgcaagaggcaatcctccacacttttttactatct |
7099978 |
T |
|
| Q |
501 |
ccttgcctattgccacaagctctgcactctcttctctatcatgtccaaatgcatattgtttgaacaataaccaacattcatcatcagagagaactgacaa |
600 |
Q |
| |
|
||||||||||| ||||||||| |||| ||||||||| | ||||||||||||||||||||||||||| ||||| || |||| |||||||||||| ||||| |
|
|
| T |
7099979 |
ccttgcctattttcacaagctcagcacgctcttctctgtaatgtccaaatgcatattgtttgaacaacaaccagcactcatgatcagagagaaccgacaa |
7100078 |
T |
|
| Q |
601 |
agaacgagttgagcatgttcccatgattgatgcaac |
636 |
Q |
| |
|
|| ||| |||| |||||||||| ||||||| ||||| |
|
|
| T |
7100079 |
aggacgggttgggcatgttcccgtgattgaggcaac |
7100114 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 338; Significance: 0; HSPs: 20)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 338; E-Value: 0
Query Start/End: Original strand, 14 - 636
Target Start/End: Original strand, 17982978 - 17983591
Alignment:
| Q |
14 |
ctttttgacatatttgtcaaacatgcattctctaaaaccatacattcttgcaccactactgatcgagcaagatcatggatgagatcatgcattttgaaag |
113 |
Q |
| |
|
|||||||||| || |||| | |||||||||||||||||| |||||| ||| || |||||||| ||||||||||||||| |||||| ||||||||||||| |
|
|
| T |
17982978 |
ctttttgacaagttagtcacagatgcattctctaaaaccacacattcatgccccgctactgattgagcaagatcatggacgagatcgtgcattttgaaag |
17983077 |
T |
|
| Q |
114 |
aaatgtctcttgaatcatcatccatatgaatgtcttgaaagaaagacttttggcacaattcattccaaatcatgttgccaacatcttcaacctccaaatt |
213 |
Q |
| |
|
|||| | ||||||| |||||| ||||| ||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17983078 |
aaatcacacttgaataatcatcaatatggatgtcttgaaagaaagatttttggtacaattcattccaaatcatgttgccaacatcttcaacctccaaatt |
17983177 |
T |
|
| Q |
214 |
ttttctagatgaaataaattcattagccatccaaagatgaatcagttcttccttcatgatttttgtatctttaggaaatatagcacaaaaagcgaaacat |
313 |
Q |
| |
|
|||||||||||| ||||||| ||||||||||||||||||||| |||||||| |||||||||| || ||||| ||||||||||||||||||||||||||| |
|
|
| T |
17983178 |
ttttctagatgagataaatttattagccatccaaagatgaattagttcttctttcatgatttctgcttctttgggaaatatagcacaaaaagcgaaacat |
17983277 |
T |
|
| Q |
314 |
tgttttaaggttggtgataaatgaaagtagctcaacctcagagctggcaaagtagaattctcatgcggtaaatcccaaagctcgctctctttaatttcaa |
413 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |||||||| ||| |||||||||||||||||||| |||| |||||||||||||||||||||| |
|
|
| T |
17983278 |
tgttttaaggttggtgataaatgaaagtagctcaaccttagagctgggaaaatagaattctcatgcggtaaagcccagagctcgctctctttaatttcaa |
17983377 |
T |
|
| Q |
414 |
accattccttttcttcactccttgagtgcattagacaccccaatgcttgtgttgcaagaggcaatcccgcacannnnnnnactatctccttgcctattgc |
513 |
Q |
| |
|
|||||||||||| |||| |||||||| ||||| ||||||| || ||||||||||||||| |||| |||||||||||||||||| |
|
|
| T |
17983378 |
accattcctttt---------ttgaatgcattaggcaccctaatgcttttgctgcaagaggcaatcctccacacttttttactatctccttgcctatttt |
17983468 |
T |
|
| Q |
514 |
cacaagctctgcactctcttctctatcatgtccaaatgcatattgtttgaacaataaccaacattcatcatcagagagaactgacaaagaacgagttgag |
613 |
Q |
| |
|
||||||||| | ||||||||||||||| ||||||||||||||||||||||| ||| ||||||||| |||||||||||||||| || |||||||| |
|
|
| T |
17983469 |
cacaagctcgaaaggctcttctctatcatgcccaaatgcatattgtttgaacaacaactaacattcattgtcagagagaactgacagaggacgagttgga |
17983568 |
T |
|
| Q |
614 |
catgttcccatgattgatgcaac |
636 |
Q |
| |
|
||||||||||| ||||| ||||| |
|
|
| T |
17983569 |
catgttcccataattgaggcaac |
17983591 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 52 - 594
Target Start/End: Original strand, 30206631 - 30207173
Alignment:
| Q |
52 |
catacattcttgcaccactactgatcgagcaagatcatggatgagatcatgcattttgaaagaaatgtctcttgaatcatcatccatatgaatgtcttga |
151 |
Q |
| |
|
|||||||||||| ||| ||||||| ||||||||||||||| ||||||||||| |||||||||||||||| ||| | | ||||| | ||||||||| |
|
|
| T |
30206631 |
catacattcttgacccattactgattgagcaagatcatggacaagatcatgcatcttgaaagaaatgtctccagaaccgttgtccatcttgatgtcttga |
30206730 |
T |
|
| Q |
152 |
aagaaagacttttggcacaattcattccaaatcatgttgccaacatcttcaacctccaaattttttctagatgaaataaattcattagccatccaaagat |
251 |
Q |
| |
|
|||||||| |||||||||||||||||||||| |||| ||||||||||||||||||||| ||||| |||||| ||||||||||||||||||||||||||| |
|
|
| T |
30206731 |
aagaaagatttttggcacaattcattccaaaccatgctgccaacatcttcaacctccatattttccctagataaaataaattcattagccatccaaagat |
30206830 |
T |
|
| Q |
252 |
gaatcagttcttccttcatgatttttgtatctttaggaaatatagcacaaaaagcgaaacattgttttaaggttggtgataaatgaaagtagctcaacct |
351 |
Q |
| |
|
|||||| ||||||| ||| || || ||||||||| ||||| |||||||||||||||||||| | ||||||||||| | ||||||||||||||||||||| |
|
|
| T |
30206831 |
gaatcaattcttccctcacgaattctgtatctttgggaaacatagcacaaaaagcgaaacaccgctttaaggttggagttaaatgaaagtagctcaacct |
30206930 |
T |
|
| Q |
352 |
cagagctggcaaagtagaattctcatgcggtaaatcccaaagctcgctctctttaatttcaaaccattccttttcttcactccttgagtgcattagacac |
451 |
Q |
| |
|
|| ||| || ||| || |||||||||| |||||| ||||||| || |||||||||||||||| |||||| ||||||||| ||||||| |||||||| |
|
|
| T |
30206931 |
caaagcaggtaaaatataattctcatgtggtaaagcccaaagttcactctctttaatttcaagccattctttttcttcattccttgaactcattagacct |
30207030 |
T |
|
| Q |
452 |
cccaatgcttgtgttgcaagaggcaatcccgcacannnnnnnactatctccttgcctattgccacaagctctgcactctcttctctatcatgtccaaatg |
551 |
Q |
| |
|
||||||||||||| ||||||||||||||| |||| ||||||||||| |||||| ||||||||||||||| ||||||||||| |||||||||| |
|
|
| T |
30207031 |
cccaatgcttgtgctgcaagaggcaatccatcacatttctttactatctcctttcctatttccacaagctctgcacgctcttctctattttgtccaaatg |
30207130 |
T |
|
| Q |
552 |
catattgtttgaacaataaccaacattcatcatcagagagaac |
594 |
Q |
| |
|
|||||||||||||||| ||||||||||||| |||||||||||| |
|
|
| T |
30207131 |
catattgtttgaacaacaaccaacattcattatcagagagaac |
30207173 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 52 - 636
Target Start/End: Original strand, 29872283 - 29872867
Alignment:
| Q |
52 |
catacattcttgcaccactactgatcgagcaagatcatggatgagatcatgcattttgaaagaaatgtctcttgaatcatcatccatatgaatgtcttga |
151 |
Q |
| |
|
||||||||||||| ||| || |||| |||| |||||||||| ||||||||||| |||||||||||||||| |||| |||||||| | |||||| |
|
|
| T |
29872283 |
catacattcttgccccattattgattgagcgagatcatggacaagatcatgcatcttgaaagaaatgtctccagaatattcatccatcttgccatcttga |
29872382 |
T |
|
| Q |
152 |
aagaaagacttttggcacaattcattccaaatcatgttgccaacatcttcaacctccaaattttttctagatgaaataaattcattagccatccaaagat |
251 |
Q |
| |
|
||||| || |||||| ||||||| ||||||| |||||| |||||||||||||| |||||||| ||||||||||||||||||||||||||||||| | |
|
|
| T |
29872383 |
aagaatgatttttggtacaattccttccaaaccatgtttccaacatcttcaacgtccaaattacccatagatgaaataaattcattagccatccaaagtt |
29872482 |
T |
|
| Q |
252 |
gaatcagttcttccttcatgatttttgtatctttaggaaatatagcacaaaaagcgaaacattgttttaaggttggtgataaatgaaagtagctcaacct |
351 |
Q |
| |
|
|||||| |||||| |||| ||||||| |||| || ||||||||||| ||||||| ||||||||| |||| |||||||| ||||| |||||| |||||||| |
|
|
| T |
29872483 |
gaatcaattcttctttcaggatttttctatccttgggaaatatagcgcaaaaagagaaacattgctttagggttggtgttaaataaaagtaactcaacct |
29872582 |
T |
|
| Q |
352 |
cagagctggcaaagtagaattctcatgcggtaaatcccaaagctcgctctctttaatttcaaaccattccttttcttcactccttgagtgcattagacac |
451 |
Q |
| |
|
|| ||| ||||| ||||||| || |||| |||| |||||||||| || || ||||| |||| |||||||||||||||| |||||||| ||| | || |
|
|
| T |
29872583 |
caaagcaagcaaaatagaattttcttgcgataaagcccaaagctcactgtccttaatatcaagccattccttttcttcattccttgagctcatcaaacct |
29872682 |
T |
|
| Q |
452 |
cccaatgcttgtgttgcaagaggcaatcccgcacannnnnnnactatctccttgcctattgccacaagctctgcactctcttctctatcatgtccaaatg |
551 |
Q |
| |
|
|||||||||| || ||||||||||||||| ||| || |||||||| |||||| ||| ||||| || | ||||||||| | || |||||||| |
|
|
| T |
29872683 |
cccaatgcttttgctgcaagaggcaatccattacatttctttacaatctcctttcctatttccataagctttgtatgctcttctctgtaatatccaaatg |
29872782 |
T |
|
| Q |
552 |
catattgtttgaacaataaccaacattcatcatcagagagaactgacaaagaacgagttgagcatgttcccatgattgatgcaac |
636 |
Q |
| |
|
|||||| ||||||||| |||||||||||| |||||||| | | |||||||| ||| | ||||||||||| ||||| |||||| |
|
|
| T |
29872783 |
catattctttgaacaacaaccaacattcactatcagagataccagacaaagagtgagcttggcatgttcccacgattgttgcaac |
29872867 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 73 - 627
Target Start/End: Complemental strand, 30521601 - 30521047
Alignment:
| Q |
73 |
tgatcgagcaagatcatggatgagatcatgcattttgaaagaaatgtctcttgaatcatcatccatatgaatgtcttgaaagaaagacttttggcacaat |
172 |
Q |
| |
|
|||| ||||||||||||||| |||||||||| |||||||||||| ||| ||||||||| |||| | || ||||| || || ||||||||||||||| |
|
|
| T |
30521601 |
tgattgagcaagatcatggacaagatcatgcaacttgaaagaaatgcctcctgaatcatcgaccatcttgatttcttggaaaaatgacttttggcacaat |
30521502 |
T |
|
| Q |
173 |
tcattccaaatcatgttgccaacatcttcaacctccaaattttttctagatgaaataaattcattagccatccaaagatgaatcagttcttccttcatga |
272 |
Q |
| |
|
|||||||||||||| || ||||||||||| ||||| ||||||| || ||||| |||||| | || || ||||| |||||||| | ||| ||||||||| |
|
|
| T |
30521501 |
tcattccaaatcatatttccaacatcttctacctctaaattttcccttgatgatataaatccgttggcgatccagagatgaattaaatctcccttcatga |
30521402 |
T |
|
| Q |
273 |
tttttgtatctttaggaaatatagcacaaaaagcgaaacattgttttaaggttggtgataaatgaaagtagctcaacctcagagctggcaaagtagaatt |
372 |
Q |
| |
|
||| | ||||||| ||||| || |||||||||| ||||||||||||||||||||| ||||||||||||||||||||| | ||| |||||| ||||||| |
|
|
| T |
30521401 |
tttctatatctttgggaaacatggcacaaaaagtgaaacattgttttaaggttgggtttaaatgaaagtagctcaaccttaaagcaggcaaaatagaatt |
30521302 |
T |
|
| Q |
373 |
ctcatgcggtaaatcccaaagctcgctctctttaatttcaaaccattccttttcttcactccttgagtgcattagacaccccaatgcttgtgttgcaaga |
472 |
Q |
| |
|
||||| ||||||| ||||| | ||| ||||||||||||| |||||| |||||| ||||||||||| |||||| | ||||||||||||| ||||||| |
|
|
| T |
30521301 |
ctcattcggtaaagaccaaatcctgctatctttaatttcaagccattctttttctccactccttgagcacattaggcctcccaatgcttgtgctgcaaga |
30521202 |
T |
|
| Q |
473 |
ggcaatcccgcacannnnnnnactatctccttgcctattgccacaagctctgcactctcttctctatcatgtccaaatgcatattgtttgaacaataacc |
572 |
Q |
| |
|
||||||||| |||| |||||||| || ||||||| |||||||| | || ||||||||||||| ||||||||||||||||||||| |||| |
|
|
| T |
30521201 |
ggcaatcccccacacttctttactatctcttttcctattgtgacaagctcagtctgctgctctctatcatgtcgaaatgcatattgtttgaacaacaacc |
30521102 |
T |
|
| Q |
573 |
aacattcatcatcagagagaactgacaaagaacgagttgagcatgttcccatgat |
627 |
Q |
| |
|
||||||||| ||||| ||| | |||||| | ||| | ||||||||||||||| |
|
|
| T |
30521101 |
aacattcatattcagatagaccagacaaatgatgagcttggcatgttcccatgat |
30521047 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 73 - 627
Target Start/End: Complemental strand, 30561941 - 30561387
Alignment:
| Q |
73 |
tgatcgagcaagatcatggatgagatcatgcattttgaaagaaatgtctcttgaatcatcatccatatgaatgtcttgaaagaaagacttttggcacaat |
172 |
Q |
| |
|
|||| ||||||||||||||| |||||||||| |||||||||||| ||| ||||||||| |||| | || ||||| || || ||||||||||||||| |
|
|
| T |
30561941 |
tgattgagcaagatcatggacaagatcatgcaacttgaaagaaatgcctcctgaatcatcgaccatcttgatttcttggaaaaatgacttttggcacaat |
30561842 |
T |
|
| Q |
173 |
tcattccaaatcatgttgccaacatcttcaacctccaaattttttctagatgaaataaattcattagccatccaaagatgaatcagttcttccttcatga |
272 |
Q |
| |
|
|||||||||||||| || ||||||||||| ||||| ||||||| || ||||| |||||| | || || ||||| |||||||| | ||| ||||||||| |
|
|
| T |
30561841 |
tcattccaaatcatatttccaacatcttctacctctaaattttcccttgatgatataaatccgttggcgatccagagatgaattaaatctcccttcatga |
30561742 |
T |
|
| Q |
273 |
tttttgtatctttaggaaatatagcacaaaaagcgaaacattgttttaaggttggtgataaatgaaagtagctcaacctcagagctggcaaagtagaatt |
372 |
Q |
| |
|
||| | ||||||| ||||| || |||||||||| ||||||||||||||||||||| ||||||||||||||||||||| | ||| |||||| ||||||| |
|
|
| T |
30561741 |
tttctatatctttgggaaacatggcacaaaaagtgaaacattgttttaaggttgggtttaaatgaaagtagctcaaccttaaagcaggcaaaatagaatt |
30561642 |
T |
|
| Q |
373 |
ctcatgcggtaaatcccaaagctcgctctctttaatttcaaaccattccttttcttcactccttgagtgcattagacaccccaatgcttgtgttgcaaga |
472 |
Q |
| |
|
||||| ||||||| ||||| | ||| ||||||||||||| |||||| |||||| ||||||||||| |||||| | ||||||||||||| ||||||| |
|
|
| T |
30561641 |
ctcattcggtaaagaccaaatcctgctatctttaatttcaagccattctttttctccactccttgagcacattaggcctcccaatgcttgtgctgcaaga |
30561542 |
T |
|
| Q |
473 |
ggcaatcccgcacannnnnnnactatctccttgcctattgccacaagctctgcactctcttctctatcatgtccaaatgcatattgtttgaacaataacc |
572 |
Q |
| |
|
||||||||| |||| |||||||| || ||||||| |||||||| | || ||||||||||||| ||||||||||||||||||||| |||| |
|
|
| T |
30561541 |
ggcaatcccccacacttctttactatctcttttcctattgtgacaagctcagtctgctgctctctatcatgtcgaaatgcatattgtttgaacaacaacc |
30561442 |
T |
|
| Q |
573 |
aacattcatcatcagagagaactgacaaagaacgagttgagcatgttcccatgat |
627 |
Q |
| |
|
||||||||| ||||| ||| | |||||| | ||| | ||||||||||||||| |
|
|
| T |
30561441 |
aacattcatattcagatagaccagacaaatgatgagcttggcatgttcccatgat |
30561387 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 183; E-Value: 1e-98
Query Start/End: Original strand, 37 - 636
Target Start/End: Original strand, 29853405 - 29854004
Alignment:
| Q |
37 |
tgcattctctaaaaccatacattcttgcaccactactgatcgagcaagatcatggatgagatcatgcattttgaaagaaatgtctcttgaatcatcatcc |
136 |
Q |
| |
|
||||||||| ||| || |||||||||| ||| ||||||| |||| |||||||||| ||||||||||| |||||| ||||||||| || | |||||| |
|
|
| T |
29853405 |
tgcattctccaaatacacacattcttgccccattactgattgagcgagatcatggacaagatcatgcatcttgaaaaaaatgtctccagagtattcatcc |
29853504 |
T |
|
| Q |
137 |
atatgaatgtcttgaaagaaagacttttggcacaattcattccaaatcatgttgccaacatcttcaacctccaaattttttctagatgaaataaattcat |
236 |
Q |
| |
|
|| | || ||||||||||| ||||||||| ||||||| ||||||| ||| || |||||||||||||| |||||||| |||||||||||||| ||| |
|
|
| T |
29853505 |
atcttgatatcttgaaagaatgacttttggtacaattccttccaaaccatatttccaacatcttcaacgtccaaattacccttagatgaaataaatccat |
29853604 |
T |
|
| Q |
237 |
tagccatccaaagatgaatcagttcttccttcatgatttttgtatctttaggaaatatagcacaaaaagcgaaacattgttttaaggttggtgataaatg |
336 |
Q |
| |
|
||||||||||||| ||||||| |||||| |||| ||||| | ||| || ||||||||||| ||||| | |||||||||||||| |||||||| ||||| |
|
|
| T |
29853605 |
tagccatccaaagttgaatcaattcttctttcaggatttctccatccttgggaaatatagcgcaaaaggagaaacattgttttagggttggtgttaaata |
29853704 |
T |
|
| Q |
337 |
aaagtagctcaacctcagagctggcaaagtagaattctcatgcggtaaatcccaaagctcgctctctttaatttcaaaccattccttttcttcactcctt |
436 |
Q |
| |
|
|||||| |||||||||| ||| ||||| ||||||| || || |||||| |||||||||| || |||||||| |||| |||||||||||||||| ||||| |
|
|
| T |
29853705 |
aaagtaactcaacctcaaagcaagcaaaatagaattttcttgtggtaaagcccaaagctcactgtctttaatatcaagccattccttttcttcattcctt |
29853804 |
T |
|
| Q |
437 |
gagtgcattagacaccccaatgcttgtgttgcaagaggcaatcccgcacannnnnnnactatctccttgcctattgccacaagctctgcactctcttctc |
536 |
Q |
| |
|
||| ||| | || ||||||| || || ||||||||||||||| ||| || |||||||| |||||| ||||||||| || | |||||||| |
|
|
| T |
29853805 |
gagctcatcaaacctcccaatgtttttgctgcaagaggcaatccattacatttctttacaatctcctttcctatttccacaagctttgtatgctcttctc |
29853904 |
T |
|
| Q |
537 |
tatcatgtccaaatgcatattgtttgaacaataaccaacattcatcatcagagagaactgacaaagaacgagttgagcatgttcccatgattgatgcaac |
636 |
Q |
| |
|
| || |||||||||||||| ||||||||| |||||||||||| |||||||||| | ||||||| ||| | ||||||||||||||||| |||||| |
|
|
| T |
29853905 |
tgaaatatccaaatgcatattctttgaacaacaaccaacattcactatcagagagaccatacaaagagtgagcttggcatgttcccatgattgttgcaac |
29854004 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 171; E-Value: 2e-91
Query Start/End: Original strand, 52 - 601
Target Start/End: Complemental strand, 30338519 - 30337973
Alignment:
| Q |
52 |
catacattcttgcaccactactgatcgagcaagatcatggatgagatcatgcattttgaaagaaatgtctcttgaatcatcatccatatgaatgtcttga |
151 |
Q |
| |
|
||||||||||||| ||| ||||||| |||| |||||||||| ||||||||||| |||||||||||||||| |||| |||||||| | | |||||| |
|
|
| T |
30338519 |
catacattcttgccccattactgattgagcgagatcatggacaagatcatgcatcttgaaagaaatgtctccagaatattcatccatcttgctatcttga |
30338420 |
T |
|
| Q |
152 |
aagaaagacttttggcacaattcattccaaatcatgttgccaacatcttcaacctccaaattttttctagatgaaataaattcattagccatccaaagat |
251 |
Q |
| |
|
||||| || |||| | ||||||| ||||||| |||||| ||||||||||||||||| ||||| | | || ||||||| |||||||||||||||| | |
|
|
| T |
30338419 |
aagaacgattttttgtacaattccttccaaaccatgtttccaacatcttcaacctctaaattcctctt---tgcaataaatccattagccatccaaagtt |
30338323 |
T |
|
| Q |
252 |
gaatcagttcttccttcatgatttttgtatctttaggaaatatagcacaaaaagcgaaacattgttttaaggttggtgataaatgaaagtagctcaacct |
351 |
Q |
| |
|
|||||| ||||||||||| ||||| | ||||||| ||||||||||||||||| | ||||||||| |||| |||||||| ||||| |||||| ||||| || |
|
|
| T |
30338322 |
gaatcaattcttccttcaggatttctctatctttgggaaatatagcacaaaaggagaaacattgctttagggttggtgttaaataaaagtaactcaaact |
30338223 |
T |
|
| Q |
352 |
cagagctggcaaagtagaattctcatgcggtaaatcccaaagctcgctctctttaatttcaaaccattccttttcttcactccttgagtgcattagacac |
451 |
Q |
| |
|
|| ||| || ||| |||| || ||||| ||||||||||||||||| || |||||||| |||| |||||||||||||||| || ||||| ||||| || | |
|
|
| T |
30338222 |
caaagcaggtaaaatagatttttcatgtggtaaatcccaaagctcactgtctttaatatcaagccattccttttcttcattcattgagaccattaaaccc |
30338123 |
T |
|
| Q |
452 |
cccaatgcttgtgttgcaagaggcaatcccgcacannnnnnnactatctccttgcctattgccacaagctctgcactctcttctctatcatgtccaaatg |
551 |
Q |
| |
|
|||||||||| || ||||||||||||||| ||| ||||||||||| || ||| ||||||||| || | ||||||| | | | || ||||| |
|
|
| T |
30338122 |
cccaatgcttttgctgcaagaggcaatccattacatttctttactatctcctttccaatttccacaagctttgtatcctcttctttgttacgtttaaatg |
30338023 |
T |
|
| Q |
552 |
catattgtttgaacaataaccaacattcatcatcagagagaactgacaaa |
601 |
Q |
| |
|
||| |||||||||||| |||||||| ||| |||||||||| | |||||| |
|
|
| T |
30338022 |
catgttgtttgaacaacaaccaacaatcactatcagagagaccagacaaa |
30337973 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 170; E-Value: 7e-91
Query Start/End: Original strand, 52 - 592
Target Start/End: Complemental strand, 30242369 - 30241838
Alignment:
| Q |
52 |
catacattcttgcaccactactgatcgagcaagatcatggatgagatcatgcattttgaaagaaatgtctcttgaatcatcatccatatgaatgtcttga |
151 |
Q |
| |
|
|||||||||| || ||| ||||||| |||| |||||||||| ||||||||||| |||||||||||||||| |||| |||||||| | |||||||| |
|
|
| T |
30242369 |
catacattctggccccattactgattgagcgagatcatggacaagatcatgcatcttgaaagaaatgtctccagaatattcatccattttgctgtcttga |
30242270 |
T |
|
| Q |
152 |
aagaaagacttttggcacaattcattccaaatcatgttgccaacatcttcaacctccaaattttttctagatgaaataaattcattagccatccaaagat |
251 |
Q |
| |
|
|| || || |||||| ||||||| ||||||| |||||| ||||||||||||||||| || ||| || || ||||||| |||||||||| || || | |
|
|
| T |
30242269 |
aaaaatgatttttggtacaattccttccaaaccatgtttccaacatcttcaacctctaa---tttcctctttgcaataaatccattagccattcagagct |
30242173 |
T |
|
| Q |
252 |
gaatcagttcttccttcatgatttttgtatctttaggaaatatagcacaaaaagcgaaacattgttttaaggttggtgataaatgaaagtagctcaacct |
351 |
Q |
| |
|
|||||| ||||||||||| ||||| | |||||| ||||||||||||||||||| |||||||||||||| ||||||| ||||| |||||| |||||||| |
|
|
| T |
30242172 |
gaatcaattcttccttcaggatttctccatctttgggaaatatagcacaaaaagagaaacattgttttagagttggtgttaaataaaagtaactcaacct |
30242073 |
T |
|
| Q |
352 |
cagagctggcaaagtagaattctcatgcggtaaatcccaaagctcgctctctttaatttcaaaccattccttttcttcactccttgagtgcattagacac |
451 |
Q |
| |
|
|| ||| ||||| |||| || || || || ||||||||||||| ||||||||||||| |||||||| ||||||| |||||||| ||||| || |
|
|
| T |
30242072 |
caaagcaggcaa-----aatt-tcttgtggcaaggcccaaagctcgctatctttaatttcaagccattcctcttcttcattccttgagctcattaaacct |
30241979 |
T |
|
| Q |
452 |
cccaatgcttgtgttgcaagaggcaatcccgcacannnnnnnactatctccttgcctattgccacaagctctgcactctcttctctatcatgtccaaatg |
551 |
Q |
| |
|
|||||||||| | ||||||||||||||| ||| || |||||||| |||||| |||||||| || |||||||||||||| ||||||||||| |
|
|
| T |
30241978 |
cccaatgctttcgctgcaagaggcaatccattacatttctttacaatctcctttcctattttcacaagctttgtactctcttctctataatgtccaaatg |
30241879 |
T |
|
| Q |
552 |
catattgtttgaacaataaccaacattcatcatcagagaga |
592 |
Q |
| |
|
|||||||||||||||| |||||||||||||| || |||||| |
|
|
| T |
30241878 |
catattgtttgaacaacaaccaacattcatcctcggagaga |
30241838 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 167; E-Value: 4e-89
Query Start/End: Original strand, 53 - 636
Target Start/End: Original strand, 30400184 - 30400767
Alignment:
| Q |
53 |
atacattcttgcaccactactgatcgagcaagatcatggatgagatcatgcattttgaaagaaatgtctcttgaatcatcatccatatgaatgtcttgaa |
152 |
Q |
| |
|
|||||||||||| ||| |||||| ||| |||||||||| ||||||||||| ||||| ||||||| | ||| |||||||| | ||||||||| |
|
|
| T |
30400184 |
atacattcttgccccattactgacttagcgagatcatggacaagatcatgcatcttgaatgaaatgttgccagaaaattcatccatttttttgtcttgaa |
30400283 |
T |
|
| Q |
153 |
agaaagacttttggcacaattcattccaaatcatgttgccaacatcttcaacctccaaattttttctagatgaaataaattcattagccatccaaagatg |
252 |
Q |
| |
|
|||| || |||||| ||||||||| ||||| |||| |||||||||||||||||||| ||| | ||||||||| ||| |||||||||||||||| || |
|
|
| T |
30400284 |
agaatgatttttggtacaattcatcccaaaccatgatgccaacatcttcaacctccgtattaccccaagatgaaatcaatccattagccatccaaagctg |
30400383 |
T |
|
| Q |
253 |
aatcagttcttccttcatgatttttgtatctttaggaaatatagcacaaaaagcgaaacattgttttaaggttggtgataaatgaaagtagctcaacctc |
352 |
Q |
| |
|
||||| |||||| |||| ||||| |||| || ||||||||||||||||||| ||||||||| |||| ||| |||| ||||| |||||| ||||||||| |
|
|
| T |
30400384 |
aatcaattcttctttcaagatttccctatccttgggaaatatagcacaaaaagagaaacattgctttagggtcggtgttaaataaaagtaactcaacctc |
30400483 |
T |
|
| Q |
353 |
agagctggcaaagtagaattctcatgcggtaaatcccaaagctcgctctctttaatttcaaaccattccttttcttcactccttgagtgcattagacacc |
452 |
Q |
| |
|
| || ||||| || |||| || | |||||| |||||||||| | |||||||| |||| ||||||||||||| || |||||||| ||| | || | |
|
|
| T |
30400484 |
aaagaacgcaaaatataattttcttctggtaaagcccaaagctcagtgtctttaatatcaagccattccttttctccattccttgagctcatcaaacctc |
30400583 |
T |
|
| Q |
453 |
ccaatgcttgtgttgcaagaggcaatcccgcacannnnnnnactatctccttgcctattgccacaagctctgcactctcttctctatcatgtccaaatgc |
552 |
Q |
| |
|
||||||||| || ||||||||||||||| ||| ||||||||||| |||||||| ||||| ||||||| ||||||||||| |||||| ||||| |
|
|
| T |
30400584 |
ccaatgcttttgctgcaagaggcaatccattacatttctttactatctcctttcctattgctacaagttctgcacgctcttctctataatgtcccaatgc |
30400683 |
T |
|
| Q |
553 |
atattgtttgaacaataaccaacattcatcatcagagagaactgacaaagaacgagttgagcatgttcccatgattgatgcaac |
636 |
Q |
| |
|
||||| ||||||||| |||||||||||| |||||||||| | |||||||| ||| | ||||||||||||||||| |||||| |
|
|
| T |
30400684 |
atattctttgaacaacaaccaacattcactatcagagagaccagacaaagagtgagcttggcatgttcccatgattgttgcaac |
30400767 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 167; E-Value: 4e-89
Query Start/End: Original strand, 37 - 592
Target Start/End: Original strand, 30749737 - 30750292
Alignment:
| Q |
37 |
tgcattctctaaaaccatacattcttgcaccactactgatcgagcaagatcatggatgagatcatgcattttgaaagaaatgtctcttgaatcatcatcc |
136 |
Q |
| |
|
||||||||| ||| ||||||||||||| ||| ||||||| ||||||||||||||| |||||||| || ||||| |||||||| | ||| |||||| |
|
|
| T |
30749737 |
tgcattctccaaatacatacattcttgccccattactgattgagcaagatcatggacaagatcatgaatcttgaatgaaatgtcgccagaaaattcatcc |
30749836 |
T |
|
| Q |
137 |
atatgaatgtcttgaaagaaagacttttggcacaattcattccaaatcatgttgccaacatcttcaacctccaaattttttctagatgaaataaattcat |
236 |
Q |
| |
|
|| | | ||||||||||| || ||||| ||||||||| ||||| |||| ||||||||||||||||||||| ||| ||||||||||| ||| ||| |
|
|
| T |
30749837 |
atttttctatcttgaaagaatgatttttgatacaattcatcccaaaccatgatgccaacatcttcaacctccatattacccctagatgaaatcaatccat |
30749936 |
T |
|
| Q |
237 |
tagccatccaaagatgaatcagttcttccttcatgatttttgtatctttaggaaatatagcacaaaaagcgaaacattgttttaaggttggtgataaatg |
336 |
Q |
| |
|
||||||||||||| ||||| || |||||| | ||||| || |||||| ||||||||||||||||||| |||||||||||||| || || | ||||| |
|
|
| T |
30749937 |
tagccatccaaagccaaatcaatttttcctttaggatttctgcatctttgggaaatatagcacaaaaagagaaacattgttttagggctgccggtaaata |
30750036 |
T |
|
| Q |
337 |
aaagtagctcaacctcagagctggcaaagtagaattctcatgcggtaaatcccaaagctcgctctctttaatttcaaaccattccttttcttcactcctt |
436 |
Q |
| |
|
|||||| |||||||||| ||| |||||| | ||||| |||| | |||||||||||| || || |||||||||| || |||||||||||| || ||||| |
|
|
| T |
30750037 |
aaagtaactcaacctcaaagcaggcaaaatggaattttcatctgataaatcccaaagttcactatctttaattttaagccattccttttcatctttcctt |
30750136 |
T |
|
| Q |
437 |
gagtgcattagacaccccaatgcttgtgttgcaagaggcaatcccgcacannnnnnnactatctccttgcctattgccacaagctctgcactctcttctc |
536 |
Q |
| |
|
|||| ||||| || |||||||||| || ||||||||||||||| ||| ||||||||||| ||||||||||| || || |||| ||||||| |
|
|
| T |
30750137 |
gagttcattaaacttcccaatgcttttgctgcaagaggcaatccattacatttctttactatctcctttcctattgccacgagatcagcacgctcttctt |
30750236 |
T |
|
| Q |
537 |
tatcatgtccaaatgcatattgtttgaacaataaccaacattcatcatcagagaga |
592 |
Q |
| |
|
| | |||||||||||||||||||| |||||| | |||||||||| |||||||||| |
|
|
| T |
30750237 |
tgtaatgtccaaatgcatattgttcgaacaacagccaacattcactatcagagaga |
30750292 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 164; E-Value: 3e-87
Query Start/End: Original strand, 54 - 576
Target Start/End: Original strand, 30483515 - 30484034
Alignment:
| Q |
54 |
tacattcttgcaccactactgatcgagcaagatcatggatgagatcatgcattttgaaagaaatgtctcttgaatcatcatccatatgaatgtcttgaaa |
153 |
Q |
| |
|
||||||||||| ||| ||||||| |||| |||||||||| ||||||||||| |||||||||||||||| |||| |||||||| | | |||||||| |
|
|
| T |
30483515 |
tacattcttgccccattactgattgagcgagatcatggacaagatcatgcatcttgaaagaaatgtctccagaatattcatccatcttgctatcttgaaa |
30483614 |
T |
|
| Q |
154 |
gaaagacttttggcacaattcattccaaatcatgttgccaacatcttcaacctccaaattttttctagatgaaataaattcattagccatccaaagatga |
253 |
Q |
| |
|
||| || ||| | ||||||| ||||||| |||||| ||||||||||||||||| ||||| | | || ||||||| |||||||||||||||| ||| |
|
|
| T |
30483615 |
gaacgattttctgtacaattccttccaaaccatgtttccaacatcttcaacctctaaattcctctt---tgcaataaatccattagccatccaaagctga |
30483711 |
T |
|
| Q |
254 |
atcagttcttccttcatgatttttgtatctttaggaaatatagcacaaaaagcgaaacattgttttaaggttggtgataaatgaaagtagctcaacctca |
353 |
Q |
| |
|
|||| ||||||||||| ||||| | ||||||| ||||||||||||||||| | ||||||||| |||| |||||||| ||||| |||||| |||||||||| |
|
|
| T |
30483712 |
atcaattcttccttcaggatttctctatctttgggaaatatagcacaaaaggagaaacattgctttagggttggtgttaaataaaagtaactcaacctca |
30483811 |
T |
|
| Q |
354 |
gagctggcaaagtagaattctcatgcggtaaatcccaaagctcgctctctttaatttcaaaccattccttttcttcactccttgagtgcattagacaccc |
453 |
Q |
| |
|
||| || ||| |||| || ||||| ||||||||||||||||| || |||||||| |||| |||||||||||||||| || ||||| ||||| || ||| |
|
|
| T |
30483812 |
aagcaggtaaaatagatttttcatgtggtaaatcccaaagctcactgtctttaatatcaagccattccttttcttcattcattgagaccattaaaccccc |
30483911 |
T |
|
| Q |
454 |
caatgcttgtgttgcaagaggcaatcccgcacannnnnnnactatctccttgcctattgccacaagctctgcactctcttctctatcatgtccaaatgca |
553 |
Q |
| |
|
|||||||| || ||||||||||||||| ||| ||||||||||| || || ||||||||| || | ||||||| | | | ||| ||||||| |
|
|
| T |
30483912 |
caatgcttttgctgcaagaggcaatccattacatttctttactatctcctttccaatctccacaagctttgtatgctcttctttgttacgtctaaatgca |
30484011 |
T |
|
| Q |
554 |
tattgtttgaacaataaccaaca |
576 |
Q |
| |
|
| |||||||||||| |||||||| |
|
|
| T |
30484012 |
tgttgtttgaacaacaaccaaca |
30484034 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 161; E-Value: 2e-85
Query Start/End: Original strand, 11 - 592
Target Start/End: Original strand, 30060437 - 30061018
Alignment:
| Q |
11 |
gtgctttttgacatatttgtcaaacatgcattctctaaaaccatacattcttgcaccactactgatcgagcaagatcatggatgagatcatgcattttga |
110 |
Q |
| |
|
||||||||||||| | | ||||| ||||||||| ||| ||||||||||||| ||| ||||||| ||||||||||||||| || |||||||| |||| |
|
|
| T |
30060437 |
gtgctttttgacaaactagtcaagtttgcattctccaaatacatacattcttgccccattactgattgagcaagatcatggacaaggtcatgcatcttga |
30060536 |
T |
|
| Q |
111 |
aagaaatgtctcttgaatcatcatccatatgaatgtcttgaaagaaagacttttggcacaattcattccaaatcatgttgccaacatcttcaacctccaa |
210 |
Q |
| |
|
| |||||||| | ||| |||||||| | | ||||||||||| || |||||| ||||||||| ||| | |||| |||||||||||||||||||| |
|
|
| T |
30060537 |
atgaaatgtcgccagaaaattcatccatttttctatcttgaaagaatgatttttggtacaattcatcccacaccatgatgccaacatcttcaacctccgt |
30060636 |
T |
|
| Q |
211 |
attttttctagatgaaataaattcattagccatccaaagatgaatcagttcttccttcatgatttttgtatctttaggaaatatagcacaaaaagcgaaa |
310 |
Q |
| |
|
| | ||||||||||| ||| |||||||||||||||| ||||| ||||||||| | ||||| || |||||| ||||||||||||||||||| |||| |
|
|
| T |
30060637 |
agtacccctagatgaaatcaatccattagccatccaaagccaaatcaattcttcctttaggatttctgcatctttgggaaatatagcacaaaaagagaaa |
30060736 |
T |
|
| Q |
311 |
cattgttttaaggttggtgataaatgaaagtagctcaacctcagagctggcaaagtagaattctcatgcggtaaatcccaaagctcgctctctttaattt |
410 |
Q |
| |
|
|||||||||| || || | ||||| |||||| |||||||||| ||| |||||| | ||||| |||| | |||||||||||| || || |||||||||| |
|
|
| T |
30060737 |
cattgttttagggctgccggtaaataaaagtaactcaacctcaaagcaggcaaaatggaattttcatctgataaatcccaaagttcactgtctttaattt |
30060836 |
T |
|
| Q |
411 |
caaaccattccttttcttcactccttgagtgcattagacaccccaatgcttgtgttgcaagaggcaatcccgcacannnnnnnactatctccttgcctat |
510 |
Q |
| |
|
|| |||||||||||| || ||||||||| ||||| || ||||||| || || ||||||||||||||| || ||||||||||| ||||| |
|
|
| T |
30060837 |
taagccattccttttcatctttccttgagttcattaaacttcccaatgattttgctgcaagaggcaatccattgcatttctttactatctcctttcctat |
30060936 |
T |
|
| Q |
511 |
tgccacaagctctgcactctcttctctatcatgtccaaatgcatattgtttgaacaataaccaacattcatcatcagagaga |
592 |
Q |
| |
|
|||||| || || |||| ||||||| | | |||||||||||||||||||| |||||| |||||||||||| |||||||||| |
|
|
| T |
30060937 |
tgccacgagatcagcacgctcttctttgtgatgtccaaatgcatattgttcgaacaacaaccaacattcactatcagagaga |
30061018 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 161; E-Value: 2e-85
Query Start/End: Original strand, 37 - 636
Target Start/End: Original strand, 30435910 - 30436506
Alignment:
| Q |
37 |
tgcattctctaaaaccatacattcttgcaccactactgatcgagcaagatcatggatgagatcatgcattttgaaagaaatgtctcttgaatcatcatcc |
136 |
Q |
| |
|
||||||||| ||| ||||||||||| | || ||||||| |||| |||||||||| ||||||||||| |||||||||||||||| ||| |||||| |
|
|
| T |
30435910 |
tgcattctccaaatacatacattctttccccgttactgattgagcgagatcatggacaagatcatgcatcttgaaagaaatgtctccaaaatattcatcc |
30436009 |
T |
|
| Q |
137 |
atatgaatgtcttgaaagaaagacttttggcacaattcattccaaatcatgttgccaacatcttcaacctccaaattttttctagatgaaataaattcat |
236 |
Q |
| |
|
|| | | ||||||||||| || |||||| ||||||| ||||||| ||| || |||||||||||||| |||||||| |||||||||||||||||| |
|
|
| T |
30436010 |
atcttgctatcttgaaagaatgatttttggtacaattccttccaaaccatttttccaacatcttcaacgtccaaattacccatagatgaaataaattcat |
30436109 |
T |
|
| Q |
237 |
tagccatccaaagatgaatcagttcttccttcatgatttttgtatctttaggaaatatagcacaaaaagcgaaacattgttttaaggttggtgataaatg |
336 |
Q |
| |
|
||||||||||||| |||||| |||||| || | ||||| | |||| || ||||||||||||||||||| ||||||||| |||| |||||||| ||||| |
|
|
| T |
30436110 |
tagccatccaaagtcgaatcaattcttcttttaggatttctctatccttgggaaatatagcacaaaaagagaaacattgctttagggttggtgttaaata |
30436209 |
T |
|
| Q |
337 |
aaagtagctcaacctcagagctggcaaagtagaattctcatgcggtaaatcccaaagctcgctctctttaatttcaaaccattccttttcttcactcctt |
436 |
Q |
| |
|
|||||| ||||| |||| ||| |||||| ||||||| || || |||||| |||||||||| || |||||||| |||| |||||||||||||||| ||||| |
|
|
| T |
30436210 |
aaagtaactcaatctcaaagcgggcaaaatagaattttcttgtggtaaagcccaaagctcactgtctttaatatcaagccattccttttcttcattcctt |
30436309 |
T |
|
| Q |
437 |
gagtgcattagacaccccaatgcttgtgttgcaagaggcaatcccgcacannnnnnnactatctccttgcctattgccacaagctctgcactctcttctc |
536 |
Q |
| |
|
||| ||| | || ||||||||||| || ||||||||||||||| ||| ||||||||||| || ||| |||||| || || | ||||| |
|
|
| T |
30436310 |
gagctcatcaaaccccccaatgcttttgctgcaagaggcaatccattacatttctttactatctcctttccaatttccacaaactttgtatgctctt--- |
30436406 |
T |
|
| Q |
537 |
tatcatgtccaaatgcatattgtttgaacaataaccaacattcatcatcagagagaactgacaaagaacgagttgagcatgttcccatgattgatgcaac |
636 |
Q |
| |
|
| | | ||| |||||||| |||||||||||| |||||||| ||| |||||||||| | |||||| ||||| |||||||||||||||| |||||| |
|
|
| T |
30436407 |
tgtaacgtctaaatgcatgttgtttgaacaacaaccaacagtcactatcagagagaccagacaaacggtgagtttcccatgttcccatgattgttgcaac |
30436506 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 37 - 480
Target Start/End: Complemental strand, 30713437 - 30712994
Alignment:
| Q |
37 |
tgcattctctaaaaccatacattcttgcaccactactgatcgagcaagatcatggatgagatcatgcattttgaaagaaatgtctcttgaatcatcatcc |
136 |
Q |
| |
|
||||||||| ||| || |||||||| | || ||||||| |||| |||||||||| |||||||||||||| |||||||||| || |||| |||||| |
|
|
| T |
30713437 |
tgcattctccaaatacacacattctttccccgttactgattgagcgagatcatggacaagatcatgcattttaaaagaaatgtttccagaatattcatcc |
30713338 |
T |
|
| Q |
137 |
atatgaatgtcttgaaagaaagacttttggcacaattcattccaaatcatgttgccaacatcttcaacctccaaattttttctagatgaaataaattcat |
236 |
Q |
| |
|
|| | ||||| ||||| || |||||| ||||||| ||||||| |||||| |||||||||||||| |||||||| |||||||||||||| ||| |
|
|
| T |
30713337 |
atcttgcaatcttggaagaatgatttttggtacaattccttccaaaccatgtttccaacatcttcaacgtccaaattacccatagatgaaataaatccat |
30713238 |
T |
|
| Q |
237 |
tagccatccaaagatgaatcagttcttccttcatgatttttgtatctttaggaaatatagcacaaaaagcgaaacattgttttaaggttggtgataaatg |
336 |
Q |
| |
|
||||||||||||| |||||| |||||| || | ||||| | |||| || ||||||||||||||||||| ||||||||| |||| |||||||||||||| |
|
|
| T |
30713237 |
tagccatccaaagtcgaatcaattcttcttttaggatttctctatccttgggaaatatagcacaaaaagagaaacattgctttagggttggtgataaata |
30713138 |
T |
|
| Q |
337 |
aaagtagctcaacctcagagctggcaaagtagaattctcatgcggtaaatcccaaagctcgctctctttaatttcaaaccattccttttcttcactcctt |
436 |
Q |
| |
|
|||||| |||| ||||| ||| |||||| ||||||| || || |||||| |||||||||| || |||||||| |||| |||||| ||||||||| ||||| |
|
|
| T |
30713137 |
aaagtaactcagcctcaaagcaggcaaaatagaattttcttgtggtaaagcccaaagctcactgtctttaatatcaagccattcattttcttcattcctt |
30713038 |
T |
|
| Q |
437 |
gagtgcattagacaccccaatgcttgtgttgcaagaggcaatcc |
480 |
Q |
| |
|
||| ||| | || ||||||||||| || |||||| |||||||| |
|
|
| T |
30713037 |
gagctcatcaaaccccccaatgcttttgctgcaagtggcaatcc |
30712994 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 71 - 592
Target Start/End: Original strand, 30475503 - 30476024
Alignment:
| Q |
71 |
actgatcgagcaagatcatggatgagatcatgcattttgaaagaaatgtctcttgaatcatcatccatatgaatgtcttgaaagaaagacttttggcaca |
170 |
Q |
| |
|
|||||| ||||||||||||| | || |||||||| ||||||| |||||||| ||||| |||||| || | |||||||| ||||| || |||||||||| |
|
|
| T |
30475503 |
actgattgagcaagatcatgcactaggtcatgcatcttgaaagtaatgtctcctgaataatcatctatcttgatgtcttggaagaatgatttttggcaca |
30475602 |
T |
|
| Q |
171 |
attcattccaaatcatgttgccaacatcttcaacctccaaattttttctagatgaaataaattcattagccatccaaagatgaatcagttcttccttcat |
270 |
Q |
| |
|
||| ||||||||||| ||||||| | ||| || |||||||| | || |||||||| |||| ||||||| |||||||||| |||||||| | |
|
|
| T |
30475603 |
gttccttccaaatcatattgccaaaaaattctacatccaaattagcctttgagaaaataaatccattgcccatccatagatgaatcaaatcttcctttac |
30475702 |
T |
|
| Q |
271 |
gatttttgtatctttaggaaatatagcacaaaaagcgaaacattgttttaaggttggtgataaatgaaagtagctcaacctcagagctggcaaagtagaa |
370 |
Q |
| |
|
|||| ||||||| |||||||| ||||||||||| ||||| | |||||||| |||| ||||||||||||||| ||||||| ||||||||| | ||| |
|
|
| T |
30475703 |
aatttccatatctttgggaaatatcgcacaaaaagcaaaacaccgctttaaggtcggtgttaaatgaaagtagcttaacctcaaggctggcaaaatggaa |
30475802 |
T |
|
| Q |
371 |
ttctcatgcggtaaatcccaaagctcgctctctttaatttcaaaccattccttttcttcactccttgagtgcattagacaccccaatgcttgtgttgcaa |
470 |
Q |
| |
|
||||||| ||||| ||| || | || ||||||||||||| |||||| ||||| |||||||||||| ||||||||| ||||||||||||| ||||| |
|
|
| T |
30475803 |
ttctcatatggtaaggtccagagattactgtctttaatttcaagccattcattttcatcactccttgagcgcattagacctcccaatgcttgtgctgcaa |
30475902 |
T |
|
| Q |
471 |
gaggcaatcccgcacannnnnnnactatctccttgcctattgccacaagctctgcactctcttctctatcatgtccaaatgcatattgtttgaacaataa |
570 |
Q |
| |
|
|||||||||| |||| |||||| |||| |||||||| ||||||||| | | ||||||| | || |||||||||||||||| | ||||| || |
|
|
| T |
30475903 |
gaggcaatcctccacacttctttactatcgccttacctattgctacaagctcttcccgttcttctccagcacatccaaatgcatattgtctaaacaacaa |
30476002 |
T |
|
| Q |
571 |
ccaacattcatcatcagagaga |
592 |
Q |
| |
|
||||||||| | ||||||||| |
|
|
| T |
30476003 |
ccaacattcgttttcagagaga |
30476024 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 359 - 592
Target Start/End: Complemental strand, 30676978 - 30676745
Alignment:
| Q |
359 |
ggcaaagtagaattctcatgcggtaaatcccaaagctcgctctctttaatttcaaaccattccttttcttcactccttgagtgcattagacaccccaatg |
458 |
Q |
| |
|
|||||| ||||||| | || |||||| |||||||||| || |||||||| |||| ||||||||| |||||| |||||||| ||| | || |||||||| |
|
|
| T |
30676978 |
ggcaaaatagaatttttttgtggtaaagcccaaagctcactgtctttaatatcaagccattccttctcttcattccttgagctcatcaaaccccccaatg |
30676879 |
T |
|
| Q |
459 |
cttgtgttgcaagaggcaatcccgcacannnnnnnactatctccttgcctattgccacaagctctgcactctcttctctatcatgtccaaatgcatattg |
558 |
Q |
| |
|
||| || ||||||||||||||| ||| ||||||||||| || ||| ||||||||| || | ||||||| | | | || |||||||| ||| |
|
|
| T |
30676878 |
cttttgctgcaagaggcaatccattacatttctttactatctcctttccaatttccacaagctttgtatcctcttctttgttacgtttaaatgcatgttg |
30676779 |
T |
|
| Q |
559 |
tttgaacaataaccaacattcatcatcagagaga |
592 |
Q |
| |
|
||||||||| |||||||| ||| |||||||||| |
|
|
| T |
30676778 |
tttgaacaacaaccaacaatcactatcagagaga |
30676745 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #17
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 52 - 239
Target Start/End: Complemental strand, 30677165 - 30676978
Alignment:
| Q |
52 |
catacattcttgcaccactactgatcgagcaagatcatggatgagatcatgcattttgaaagaaatgtctcttgaatcatcatccatatgaatgtcttga |
151 |
Q |
| |
|
|||||||||| || ||| |||| || |||| |||||||||| ||||||||||| || ||||||||||||| |||| |||||||| | | |||||| |
|
|
| T |
30677165 |
catacattctggccccattactaattgagcgagatcatggacaagatcatgcatcttaaaagaaatgtctccagaatattcatccatctttctatcttga |
30677066 |
T |
|
| Q |
152 |
aagaaagacttttggcacaattcattccaaatcatgttgccaacatcttcaacctccaaattttttctagatgaaataaattcattag |
239 |
Q |
| |
|
||||| || |||||| ||||||| ||||||| | |||| |||||||| ||||| |||||||| |||||||||||||| |||||| |
|
|
| T |
30677065 |
aagaatgatttttggtacaattccttccaaaccgtgtttccaacatcatcaacgtccaaattacccatagatgaaataaatccattag |
30676978 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #18
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 296 - 425
Target Start/End: Complemental strand, 30330908 - 30330779
Alignment:
| Q |
296 |
gcacaaaaagcgaaacattgttttaaggttggtgataaatgaaagtagctcaacctcagagctggcaaagtagaattctcatgcggtaaatcccaaagct |
395 |
Q |
| |
|
||||||||||| ||||| || ||||||||||| | ||||||||||||||||||||||| | | | |||| || ||| | ||| ||||| ||||||| | |
|
|
| T |
30330908 |
gcacaaaaagcaaaacactgctttaaggttggagttaaatgaaagtagctcaacctcaaatcagacaaactataatcattatgttgtaaaacccaaagtt |
30330809 |
T |
|
| Q |
396 |
cgctctctttaatttcaaaccattcctttt |
425 |
Q |
| |
|
|||||||||||||||||| |||||||||| |
|
|
| T |
30330808 |
cgctctctttaatttcaagtcattcctttt |
30330779 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 494 - 592
Target Start/End: Complemental strand, 17418148 - 17418050
Alignment:
| Q |
494 |
actatctccttgcctattgccacaagctctgcactctcttctctatcatgtccaaatgcatattgtttgaacaataaccaacattcatcatcagagaga |
592 |
Q |
| |
|
||||| ||||||||||||| ||||| || | | ||||||| | |||| |||||||||||||||||||||||| ||||||||||||| |||||||||| |
|
|
| T |
17418148 |
actatatccttgcctattgggacaagttcctcgcgctcttctttgtcatttccaaatgcatattgtttgaacaacaaccaacattcattatcagagaga |
17418050 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 52 - 269
Target Start/End: Complemental strand, 30331128 - 30330911
Alignment:
| Q |
52 |
catacattcttgcaccactactgatcgagcaagatcatggatgagatcatgcattttgaaagaaatgtctcttgaatcatcatccatatgaatgtcttga |
151 |
Q |
| |
|
|||| ||| |||| ||| || |||| |||||||||||| || |||||| || | || |||||||||||| | |||| |||| || | ||||||| | |
|
|
| T |
30331128 |
catatattgttgctccagtattgattgagcaagatcattgaaaagatcacgcgtctttaaagaaatgtctttagaatattcatagatcttgatgtcttca |
30331029 |
T |
|
| Q |
152 |
aagaaagacttttggcacaattcattccaaatcatgttgccaacatcttcaacctccaaattttttctagatgaaataaattcattagccatccaaagat |
251 |
Q |
| |
|
||||| | |||||||||||| |||||||| |||| | |||||||| ||||||||||| ||||||||||||||| ||| ||||||| | |||| |
|
|
| T |
30331028 |
aagaatggtttttggcacaatccattccaagccatgctagcaacatctaggacctccaaattacgcctagatgaaataaatccatcagccatctagagat |
30330929 |
T |
|
| Q |
252 |
gaatcagttcttccttca |
269 |
Q |
| |
|
|| || || |||||||| |
|
|
| T |
30330928 |
aaaacaattattccttca |
30330911 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 313; Significance: 1e-176; HSPs: 3)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 313; E-Value: 1e-176
Query Start/End: Original strand, 36 - 636
Target Start/End: Original strand, 13616690 - 13617288
Alignment:
| Q |
36 |
atgcattctctaaaaccatacattcttgcaccactactgatcgagcaagatcatgg-atgagatcatgcattttgaaagaaatgtctcttgaatcatcat |
134 |
Q |
| |
|
||||||||||||||||||||||||||||| || | ||| || |||| ||||||||| | ||||| |||| |||||| ||||| ||||||||| ||||| |
|
|
| T |
13616690 |
atgcattctctaaaaccatacattcttgcccccc-actcattgagcgagatcatgggacgagattgtgcactttgaatgaaatcactcttgaataatcat |
13616788 |
T |
|
| Q |
135 |
ccatatgaatgtcttgaaagaaagacttttggcacaattcattccaaatcatgttgccaacatcttcaacctccaaattttttctagatgaaataaattc |
234 |
Q |
| |
|
|||||| ||||||||||| ||||| |||||| |||||||||||||||||||||| |||||||||||||||||||| |||||| || ||||||||||||| |
|
|
| T |
13616789 |
tcatatggatgtcttgaaaaaaagatttttggtacaattcattccaaatcatgtttccaacatcttcaacctccaatttttttttacatgaaataaattc |
13616888 |
T |
|
| Q |
235 |
attagccatccaaagatgaatcagttcttccttcatgatttttgtatctttaggaaatatagcacaaaaagcgaaacattgttttaaggttggtgataaa |
334 |
Q |
| |
|
||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| | |||| |||||||| |||||||| |||||||| |||||| |
|
|
| T |
13616889 |
attagccatccaaagatgaatcaattcttcctttgtgatttttgtatctttaggaaatacaacacagaaagcgaatcattgtttaaaggttggcgataaa |
13616988 |
T |
|
| Q |
335 |
tgaaagtagctcaacctcagagctggcaaagtagaattctcatgcggtaaatcccaaagctcgctctctttaatttcaaaccattccttttcttcactcc |
434 |
Q |
| |
|
|| ||||| |||| ||||| | | || ||| |||||||||||| | ||||||||||||||||||||||| |||||||| |||||||||||||| |||||| |
|
|
| T |
13616989 |
tg-aagtaactcagcctcaaatcaggaaaaatagaattctcataccgtaaatcccaaagctcgctctctctaatttcacaccattccttttctccactcc |
13617087 |
T |
|
| Q |
435 |
ttgagtgcattagacaccccaatgcttgtgttgcaagaggcaatcccgcacannnnnnnactatctccttgcctattgccacaagctctgcactctcttc |
534 |
Q |
| |
|
| ||||| |||||| |||||||||||||| ||||||||||||||| |||| ||||||||||| |||||||||| ||||||| ||| |||||| |
|
|
| T |
13617088 |
tcgagtgtattagagaccccaatgcttgtcctgcaagaggcaatcctccacactttttaactatctcctttcctattgcca-aagctctacacactcttc |
13617186 |
T |
|
| Q |
535 |
tctatcatgtccaaatgcatattgtttgaacaataaccaacattcatcatcagagagaactgacaaagaacgagttgagcatgttcccatgattgatgca |
634 |
Q |
| |
|
|||||||||| | ||||||||||||||||||||||||||||||||| ||||| |||||||||||||| || ||||||||||||||||||||||||||||| |
|
|
| T |
13617187 |
tctatcatgttcgaatgcatattgtttgaacaataaccaacattcaccatcatagagaactgacaaacaatgagttgagcatgttcccatgattgatgca |
13617286 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 176; E-Value: 2e-94
Query Start/End: Original strand, 52 - 579
Target Start/End: Original strand, 52352067 - 52352595
Alignment:
| Q |
52 |
catacattcttgcaccactactgatcgagcaagatcatggatgagatcatgcattttgaaagaaatgtctcttgaatcatcatccatatgaatgtcttga |
151 |
Q |
| |
|
|||||| ||| || |||| | |||| ||||||||||||| | ||||||||||| |||||||||||||||| | ||| ||||| || | ||||||||| |
|
|
| T |
52352067 |
catacactctggccccacaattgattgagcaagatcatgtacaagatcatgcatcttgaaagaaatgtctcctaaataatcattgatcttgatgtcttga |
52352166 |
T |
|
| Q |
152 |
aagaaagacttttggcacaattcattccaaatcatgttgccaacatctt-caacctccaaattttttctagatgaaataaattcattagccatccaaaga |
250 |
Q |
| |
|
||||| ||||||||| ||||||||||||||||||| |||||||| |||| | ||||||||||||| |||| ||||||||| |||| |||||||| ||| |
|
|
| T |
52352167 |
aagaatgacttttggtacaattcattccaaatcatattgccaacttctttctacctccaaattttccttagacgaaataaatccattggccatccagaga |
52352266 |
T |
|
| Q |
251 |
tgaatcagttcttccttcatgatttttgtatctttaggaaatatagcacaaaaagcgaaacattgttttaaggttggtgataaatgaaagtagctcaacc |
350 |
Q |
| |
|
||||||| || || || | ||||| |||||||| |||||||| ||||| |||| |||||||||||||||||||| | |||||| || || ||||||| |
|
|
| T |
52352267 |
tgaatcaaatcgtcttttaggatttccgtatctttgggaaatatggcacagaaagagaaacattgttttaaggttgacgttaaatggaaataactcaacc |
52352366 |
T |
|
| Q |
351 |
tcagagctggcaaagtagaattctcatgcggtaaatcccaaagctcgctctctttaatttcaaaccattccttttcttcactccttgagtgcattagaca |
450 |
Q |
| |
|
||| || |||||| |||||||||||| | |||| |||||||| ||||||||||||||||| ||||||||||||| || | |||||| ||||||||| |
|
|
| T |
52352367 |
tcaaggcaggcaaaatagaattctcatctgataaagaccaaagcttgctctctttaatttcaacccattccttttctccatttcttgagcgcattagacc |
52352466 |
T |
|
| Q |
451 |
ccccaatgcttgtgttgcaagaggcaatcccgcacannnnnnnactatctccttgcctattgccacaagctctgcactctcttctctatcatgtccaaat |
550 |
Q |
| |
|
|| |||||||||| ||||||||||||||| |||| |||||| | |||||||||||||| |||||| | | |||||| |||||||| ||||| |
|
|
| T |
52352467 |
tcctaatgcttgtgcagcaagaggcaatcccccacacttctttactatcgctttgcctattgccactagctcttctcgttcttctatatcatgttcaaat |
52352566 |
T |
|
| Q |
551 |
gcatattgtttgaacaataaccaacattc |
579 |
Q |
| |
|
|||||||||||||| || | ||||||||| |
|
|
| T |
52352567 |
gcatattgtttgaataacagccaacattc |
52352595 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 157; E-Value: 4e-83
Query Start/End: Original strand, 95 - 636
Target Start/End: Complemental strand, 20296536 - 20295995
Alignment:
| Q |
95 |
agatcatgcattttgaaagaaatgtctcttgaatcatcatccatatgaatgtcttgaaagaaagacttttggcacaattcattccaaatcatgttgccaa |
194 |
Q |
| |
|
||||||||||| |||||| |||| ||||| |||| ||||| || | || ||||||||||| || |||||| ||||||| ||||||| |||||| |||| |
|
|
| T |
20296536 |
agatcatgcatcttgaaataaatatctctagaatattcatctattttgatttcttgaaagaatgatttttggtacaattccttccaaaccatgtttccaa |
20296437 |
T |
|
| Q |
195 |
catcttcaacctccaaattttttctagatgaaataaattcattagccatccaaagatgaatcagttcttccttcatgatttttgtatctttaggaaatat |
294 |
Q |
| |
|
|||||||||| |||||||| |||||||||| ||| |||||||||||||||| ||||||| |||||| |||| ||||| | |||| ||||||||||| |
|
|
| T |
20296436 |
catcttcaacgtccaaattacccatagatgaaattaatccattagccatccaaagctgaatcaattcttctttcaagatttctctatccttaggaaatat |
20296337 |
T |
|
| Q |
295 |
agcacaaaaagcgaaacattgttttaaggttggtgataaatgaaagtagctcaacctcagagctggcaaagtagaattctcatgcggtaaatcccaaagc |
394 |
Q |
| |
|
||||||||||| ||||||||| |||| ||||||| ||||| |||||| |||| ||||| ||| |||||| |||| || || || |||||| ||||||| |
|
|
| T |
20296336 |
agcacaaaaagagaaacattgctttagagttggtgttaaataaaagtaactcagcctcaaagcaggcaaaatagatttttcttgtggtaaagcccaaagg |
20296237 |
T |
|
| Q |
395 |
tcgctctctttaatttcaaaccattccttttcttcactccttgagtgcattagacaccccaatgcttgtgttgcaagaggcaatcccgcacannnnnnna |
494 |
Q |
| |
|
|| | |||||||| ||| |||||||||||||||| || ||||| ||||| || |||||||||| || ||||||||||||||| ||| | |
|
|
| T |
20296236 |
tcattgtctttaatatcacgccattccttttcttcattcattgagaccattaaacctcccaatgcttttgctgcaagaggcaatccattacatttcttta |
20296137 |
T |
|
| Q |
495 |
ctatctccttgcctattgccacaagctctgcactctcttctctatcatgtccaaatgcatattgtttgaacaataaccaacattcatcatcagagagaac |
594 |
Q |
| |
|
|||||||||| |||||| ||||||||| || | ||||||||| | ||||| |||||||| |||||||||||| |||||||| ||| | ||||||| | |
|
|
| T |
20296136 |
ctatctcctttcctatttccacaagctttgtatgctcttctctgtaatgtctaaatgcatgttgtttgaacaacaaccaacaatcactgtaagagagacc |
20296037 |
T |
|
| Q |
595 |
tgacaaagaacgagttgagcatgttcccatgattgatgcaac |
636 |
Q |
| |
|
|||||||| ||| | ||||||||||||||||| |||||| |
|
|
| T |
20296036 |
agacaaagagtgagcttggcatgttcccatgattgttgcaac |
20295995 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 201; Significance: 1e-109; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 37 - 636
Target Start/End: Original strand, 26707429 - 26708025
Alignment:
| Q |
37 |
tgcattctctaaaaccatacattcttgcaccactactgatcgagcaagatcatggatgagatcatgcattttgaaagaaatgtctcttgaatcatcatcc |
136 |
Q |
| |
|
||||||||| ||| ||| |||||||| ||| ||||||| |||| ||||||||||| ||||||||||| |||||||||||||||| |||| ||| || |
|
|
| T |
26707429 |
tgcattctccaaatacatgcattcttgtcccattactgattgagcgagatcatggataagatcatgcatcttgaaagaaatgtctccagaatattcaccc |
26707528 |
T |
|
| Q |
137 |
atatgaatgtcttgaaagaaagacttttggcacaattcattccaaatcatgttgccaacatcttcaacctccaaattttttctagatgaaataaattcat |
236 |
Q |
| |
|
|| | | |||||||||||| || |||||| ||||||| ||||||| |||||| ||||||||||||||||| ||||| | | || ||||||| ||| |
|
|
| T |
26707529 |
atcttacagtcttgaaagaatgatttttggtacaattccttccaaaccatgtttccaacatcttcaacctctaaattcctctt---tgcaataaatccat |
26707625 |
T |
|
| Q |
237 |
tagccatccaaagatgaatcagttcttccttcatgatttttgtatctttaggaaatatagcacaaaaagcgaaacattgttttaaggttggtgataaatg |
336 |
Q |
| |
|
||||||||||||| ||||||| ||||||||||| ||||| | ||||||| ||||||||||||||||||| ||||||||| |||| |||||||| ||||| |
|
|
| T |
26707626 |
tagccatccaaagttgaatcaattcttccttcaagatttctctatctttgggaaatatagcacaaaaagagaaacattgctttagggttggtgttaaata |
26707725 |
T |
|
| Q |
337 |
aaagtagctcaacctcagagctggcaaagtagaattctcatgcggtaaatcccaaagctcgctctctttaatttcaaaccattccttttcttcactcctt |
436 |
Q |
| |
|
|||||| |||||||||| ||| |||||| |||| || || || ||||||||||||||||| || |||||||| |||| |||||||||||||||| || || |
|
|
| T |
26707726 |
aaagtaactcaacctcaaagcaggcaaaatagatttttcttgtggtaaatcccaaagctcactgtctttaatatcaagccattccttttcttcattcatt |
26707825 |
T |
|
| Q |
437 |
gagtgcattagacaccccaatgcttgtgttgcaagaggcaatcccgcacannnnnnnactatctccttgcctattgccacaagctctgcactctcttctc |
536 |
Q |
| |
|
||| ||||| || |||||||||| || ||||||||| ||||| ||| ||||||||||| |||||| ||||||||| || | |||||||| |
|
|
| T |
26707826 |
gagaacattaaacctcccaatgcttttgctgcaagaggtaatccattacatttttttactatctcctttcctatttccacaagctttgtatgctcttctc |
26707925 |
T |
|
| Q |
537 |
tatcatgtccaaatgcatattgtttgaacaataaccaacattcatcatcagagagaactgacaaagaacgagttgagcatgttcccatgattgatgcaac |
636 |
Q |
| |
|
| | ||||| |||||||| |||||||||||| |||||||| ||| |||||||||| | |||||||| ||| | ||||||||||||||||| |||||| |
|
|
| T |
26707926 |
tgtaatgtctaaatgcatgttgtttgaacaacaaccaacagtcactatcagagagaccagacaaagagtgagcttggcatgttcccatgattgttgcaac |
26708025 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 143; Significance: 9e-75; HSPs: 3)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 143; E-Value: 9e-75
Query Start/End: Original strand, 146 - 476
Target Start/End: Complemental strand, 25293827 - 25293497
Alignment:
| Q |
146 |
tcttgaaagaaagacttttggcacaattcattccaaatcatgttgccaacatcttcaacctccaaattttttctagatgaaataaattcattagccatcc |
245 |
Q |
| |
|
||||||||||| || |||||||||||||||||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||| |
|
|
| T |
25293827 |
tcttgaaagaatgatttttggcacaattcattccaaaccatgctgccaacatcttcaacctccaaattttccctagatgaaataaatccattagccatcc |
25293728 |
T |
|
| Q |
246 |
aaagatgaatcagttcttccttcatgatttttgtatctttaggaaatatagcacaaaaagcgaaacattgttttaaggttggtgataaatgaaagtagct |
345 |
Q |
| |
|
|||||||| ||| ||||||||| ||||||||||||||| ||||| |||||||||||||| |||||| | |||||||| || | ||||| ||||||||| |
|
|
| T |
25293727 |
aaagatgagtcaattcttccttatcgatttttgtatcttttggaaacatagcacaaaaagcaaaacatcgctttaaggtcggagttaaataaaagtagct |
25293628 |
T |
|
| Q |
346 |
caacctcagagctggcaaagtagaattctcatgcggtaaatcccaaagctcgctctctttaatttcaaaccattccttttcttcactccttgagtgcatt |
445 |
Q |
| |
|
||||| || | || ||| |||||||||| || ||||| |||||||| |||| |||||||||| ||| || |||||| ||||||||||| ||||| |
|
|
| T |
25293627 |
caaccacaaggaaggaaaaatagaattctcttgttgtaaagcccaaagcgtgctcagcttaatttcaagccactctttttctccactccttgagcgcatt |
25293528 |
T |
|
| Q |
446 |
agacaccccaatgcttgtgttgcaagaggca |
476 |
Q |
| |
|
|||| || ||| |||||| ||||||||||| |
|
|
| T |
25293527 |
agacctccaaatacttgtgctgcaagaggca |
25293497 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 506 - 579
Target Start/End: Complemental strand, 25293484 - 25293411
Alignment:
| Q |
506 |
cctattgccacaagctctgcactctcttctctatcatgtccaaatgcatattgtttgaacaataaccaacattc |
579 |
Q |
| |
|
|||||||| ||||| | ||||| ||| ||| | | ||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
25293484 |
cctattgcgacaagttttgcacactcatctttgtaatgtccaaatgcatattgtttgaacaacaaccaacattc |
25293411 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 494 - 574
Target Start/End: Complemental strand, 38939578 - 38939498
Alignment:
| Q |
494 |
actatctccttgcctattgccacaagctctgcactctcttctctatcatgtccaaatgcatattgtttgaacaataaccaa |
574 |
Q |
| |
|
|||||||||||||||||||| |||||||||||| |||||| | ||| ||||||| |||| |||||| || ||| ||||| |
|
|
| T |
38939578 |
actatctccttgcctattgctacaagctctgcatgctcttccccatctggtccaaaagcatgttgtttaaataatgaccaa |
38939498 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0511 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0511
Description:
Target: scaffold0511; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 494 - 539
Target Start/End: Original strand, 9295 - 9340
Alignment:
| Q |
494 |
actatctccttgcctattgccacaagctctgcactctcttctctat |
539 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
9295 |
actaactccttgcctattgccacaagctctgcacgctcttctctat |
9340 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0230 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0230
Description:
Target: scaffold0230; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 494 - 539
Target Start/End: Original strand, 4615 - 4660
Alignment:
| Q |
494 |
actatctccttgcctattgccacaagctctgcactctcttctctat |
539 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
4615 |
actaactccttgcctattgccacaagctctgcacgctcttctctat |
4660 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 38; Significance: 0.000000000004; HSPs: 4)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 494 - 539
Target Start/End: Complemental strand, 18873409 - 18873364
Alignment:
| Q |
494 |
actatctccttgcctattgccacaagctctgcactctcttctctat |
539 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
18873409 |
actaactccttgcctattgccacaagctctgcacgctcttctctat |
18873364 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 502 - 539
Target Start/End: Original strand, 16797119 - 16797156
Alignment:
| Q |
502 |
cttgcctattgccacaagctctgcactctcttctctat |
539 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
16797119 |
cttgcctattgccacaagctctgcacgctcttctctat |
16797156 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 494 - 539
Target Start/End: Complemental strand, 18806415 - 18806370
Alignment:
| Q |
494 |
actatctccttgcctattgccacaagctctgcactctcttctctat |
539 |
Q |
| |
|
|||| ||||||||||||||||||||||||||| | ||||||||||| |
|
|
| T |
18806415 |
actaactccttgcctattgccacaagctctgctcgctcttctctat |
18806370 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 217 - 269
Target Start/End: Original strand, 16987119 - 16987171
Alignment:
| Q |
217 |
tctagatgaaataaattcattagccatccaaagatgaatcagttcttccttca |
269 |
Q |
| |
|
|||||||| || || | |||||||||||||||||||||| || |||||||||| |
|
|
| T |
16987119 |
tctagatgtaacaagtccattagccatccaaagatgaatgagatcttccttca |
16987171 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0133 (Bit Score: 33; Significance: 0.000000004; HSPs: 2)
Name: scaffold0133
Description:
Target: scaffold0133; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 503 - 567
Target Start/End: Original strand, 8458 - 8522
Alignment:
| Q |
503 |
ttgcctattgccacaagctctgcactctcttctctatcatgtccaaatgcatattgtttgaacaa |
567 |
Q |
| |
|
||||||||||||||||||||||||| |||||||| || | |||||| || | |||||||||||| |
|
|
| T |
8458 |
ttgcctattgccacaagctctgcacgctcttctcgattttctccaaaagcttgttgtttgaacaa |
8522 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0133; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 503 - 539
Target Start/End: Original strand, 12800 - 12836
Alignment:
| Q |
503 |
ttgcctattgccacaagctctgcactctcttctctat |
539 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
12800 |
ttgcctattgccacaagctctgcacgctcttctctat |
12836 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0256 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0256
Description:
Target: scaffold0256; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 217 - 305
Target Start/End: Original strand, 8816 - 8904
Alignment:
| Q |
217 |
tctagatgaaataaattcattagccatccaaagatgaatcagttcttccttcatgatttttgtatctttaggaaatatagcacaaaaag |
305 |
Q |
| |
|
|||||||| || || | |||||||||||||||| ||||| || | |||||||| ||||| |||||||||||| | ||||||||||| |
|
|
| T |
8816 |
tctagatgtaacaagtccattagccatccaaagttgaatgagattttccttcaccattttaaaatctttaggaaaaacagcacaaaaag |
8904 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 494 - 534
Target Start/End: Original strand, 13378033 - 13378073
Alignment:
| Q |
494 |
actatctccttgcctattgccacaagctctgcactctcttc |
534 |
Q |
| |
|
|||||||||||||||||||| |||||||||||| |||||| |
|
|
| T |
13378033 |
actatctccttgcctattgctgcaagctctgcacgctcttc |
13378073 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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