View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8427_low_18 (Length: 291)
Name: NF8427_low_18
Description: NF8427
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8427_low_18 |
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Alignment Details
Target: chr3 (Bit Score: 264; Significance: 1e-147; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 18 - 289
Target Start/End: Original strand, 48415760 - 48416031
Alignment:
| Q |
18 |
gttgtgatggttgaaatttatgctggtgtgcctcatgtgattgataaaaatgttgatattcttcgtgacaccgttctttctgttgttgtgtgttctgtga |
117 |
Q |
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| T |
48415760 |
gttgtgatggttgaaatttatgctggtgtacctcatgtgattgataaaaatgttgatattcttcgtgacaccgttctttctgttgttgtgtgttctgtaa |
48415859 |
T |
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| Q |
118 |
agattgtgagtaatgatagtgttggagaatagggtgatgaatgtggtttggggttaagatatttggagagttgttgagaacggaaccatcatcaagggtg |
217 |
Q |
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| T |
48415860 |
agattgtgagtaatgatagtgttggagaatagggtgatgaatgtggtttggggttaagatatttggagagttgttgagaacggaaccatcatcaagggtg |
48415959 |
T |
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| Q |
218 |
agtttctgttcatgataaaggatgttattggccatttcattgtaaggctgcatcagcacacttaagattcaa |
289 |
Q |
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| T |
48415960 |
agtttctgttcatgataaaggatgttattggccatttcattgtaaggctgcatcagcacacttaagattcaa |
48416031 |
T |
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