View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8429_low_1 (Length: 401)

Name: NF8429_low_1
Description: NF8429
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8429_low_1
NF8429_low_1
[»] chr7 (61 HSPs)
chr7 (1-385)||(34440927-34441311)
chr7 (90-161)||(35536034-35536105)
chr7 (73-183)||(9527140-9527250)
chr7 (95-185)||(28165023-28165113)
chr7 (101-165)||(27121654-27121718)
chr7 (90-185)||(991997-992092)
chr7 (103-194)||(7623078-7623169)
chr7 (114-185)||(21453245-21453316)
chr7 (114-185)||(40689034-40689105)
chr7 (71-185)||(27481342-27481456)
chr7 (79-185)||(27548179-27548285)
chr7 (107-161)||(39591539-39591593)
chr7 (78-163)||(3610810-3610895)
chr7 (103-184)||(5006558-5006639)
chr7 (101-180)||(1432017-1432099)
chr7 (44-185)||(22759065-22759208)
chr7 (117-185)||(46825052-46825120)
chr7 (102-186)||(48157167-48157251)
chr7 (93-184)||(1417194-1417285)
chr7 (94-153)||(8960707-8960766)
chr7 (130-193)||(12110327-12110390)
chr7 (74-161)||(19624137-19624224)
chr7 (71-193)||(22387943-22388066)
chr7 (90-161)||(45593791-45593862)
chr7 (112-163)||(47046178-47046229)
chr7 (102-192)||(23918896-23918986)
chr7 (114-180)||(39551601-39551667)
chr7 (114-164)||(43318597-43318647)
chr7 (72-185)||(47177544-47177658)
chr7 (96-185)||(22296276-22296364)
chr7 (90-159)||(24973871-24973940)
chr7 (90-163)||(26935620-26935693)
chr7 (92-185)||(28340892-28340985)
chr7 (90-163)||(33894550-33894622)
chr7 (114-187)||(35266850-35266923)
chr7 (102-179)||(49060479-49060556)
chr7 (105-153)||(43152982-43153030)
chr7 (90-181)||(5628618-5628709)
chr7 (90-157)||(7244629-7244696)
chr7 (93-152)||(21853197-21853256)
chr7 (113-180)||(22283797-22283863)
chr7 (114-161)||(30456522-30456569)
chr7 (114-181)||(34083577-34083644)
chr7 (131-170)||(40428523-40428562)
chr7 (130-193)||(46104342-46104405)
chr7 (72-142)||(753295-753365)
chr7 (125-163)||(30180013-30180051)
chr7 (123-185)||(38010674-38010736)
chr7 (114-163)||(2767248-2767297)
chr7 (114-163)||(12835007-12835056)
chr7 (104-157)||(28178910-28178963)
chr7 (75-160)||(28440431-28440516)
chr7 (132-185)||(39907772-39907825)
chr7 (134-179)||(47795926-47795971)
chr7 (94-142)||(2176840-2176888)
chr7 (90-142)||(5373152-5373204)
chr7 (134-186)||(10190766-10190818)
chr7 (102-194)||(30133988-30134080)
chr7 (102-185)||(44686867-44686951)
chr7 (100-160)||(45813253-45813313)
chr7 (71-163)||(47528003-47528095)
[»] chr1 (83 HSPs)
chr1 (71-194)||(4363671-4363793)
chr1 (90-196)||(44032036-44032142)
chr1 (90-194)||(52286605-52286709)
chr1 (105-184)||(49517012-49517091)
chr1 (102-196)||(48830113-48830207)
chr1 (107-183)||(11211062-11211138)
chr1 (90-185)||(17269177-17269272)
chr1 (73-163)||(4200139-4200229)
chr1 (72-165)||(27140391-27140487)
chr1 (73-169)||(43372023-43372119)
chr1 (71-163)||(49557049-49557141)
chr1 (73-196)||(7273976-7274099)
chr1 (123-185)||(27738228-27738290)
chr1 (74-163)||(37841908-37841998)
chr1 (102-163)||(15360833-15360894)
chr1 (116-185)||(25006082-25006151)
chr1 (113-185)||(9656600-9656672)
chr1 (86-238)||(18420849-18421001)
chr1 (94-185)||(23544687-23544779)
chr1 (130-185)||(6279366-6279421)
chr1 (114-185)||(26630414-26630485)
chr1 (130-185)||(33204436-33204491)
chr1 (122-185)||(34179920-34179983)
chr1 (94-185)||(45999336-45999427)
chr1 (122-196)||(49365798-49365870)
chr1 (114-180)||(31517793-31517859)
chr1 (70-173)||(47877033-47877132)
chr1 (112-157)||(14737781-14737826)
chr1 (114-163)||(15687143-15687192)
chr1 (122-195)||(30371107-30371180)
chr1 (132-185)||(34952184-34952237)
chr1 (130-186)||(10586419-10586475)
chr1 (125-189)||(39976257-39976321)
chr1 (104-236)||(46252679-46252811)
chr1 (91-163)||(46499924-46499996)
chr1 (101-157)||(50319230-50319286)
chr1 (102-185)||(4256091-4256173)
chr1 (100-155)||(4549803-4549858)
chr1 (94-157)||(6976879-6976942)
chr1 (94-181)||(33527199-33527286)
chr1 (100-163)||(34619448-34619511)
chr1 (94-181)||(36070181-36070268)
chr1 (102-161)||(36151577-36151636)
chr1 (103-206)||(37842382-37842485)
chr1 (104-163)||(45990128-45990187)
chr1 (90-196)||(48282060-48282167)
chr1 (90-157)||(48748659-48748725)
chr1 (90-164)||(870972-871046)
chr1 (115-165)||(1879095-1879145)
chr1 (122-185)||(14630014-14630079)
chr1 (77-163)||(15799618-15799704)
chr1 (72-206)||(18434505-18434639)
chr1 (57-159)||(23895230-23895332)
chr1 (122-184)||(28467356-28467418)
chr1 (70-180)||(30259540-30259650)
chr1 (114-184)||(33723431-33723501)
chr1 (114-193)||(38867871-38867952)
chr1 (101-238)||(4700061-4700198)
chr1 (114-163)||(6074425-6074474)
chr1 (100-165)||(7028229-7028294)
chr1 (132-185)||(7218122-7218175)
chr1 (86-135)||(13037787-13037836)
chr1 (112-153)||(13809947-13809988)
chr1 (134-191)||(19462808-19462865)
chr1 (130-183)||(24915101-24915154)
chr1 (101-158)||(29929696-29929753)
chr1 (116-161)||(30815707-30815752)
chr1 (79-128)||(33527339-33527388)
chr1 (103-156)||(40357963-40358016)
chr1 (67-180)||(46980182-46980294)
chr1 (123-164)||(47498905-47498946)
chr1 (130-198)||(1565570-1565638)
chr1 (112-236)||(10199405-10199529)
chr1 (72-185)||(12519016-12519131)
chr1 (130-186)||(15361680-15361736)
chr1 (132-164)||(15784305-15784337)
chr1 (134-238)||(18403191-18403295)
chr1 (123-163)||(28788608-28788648)
chr1 (100-180)||(40304107-40304187)
chr1 (112-172)||(44936651-44936711)
chr1 (73-161)||(45107533-45107620)
chr1 (113-185)||(47002922-47002994)
chr1 (101-185)||(49888705-49888789)
[»] chr2 (67 HSPs)
chr2 (87-196)||(3673731-3673840)
chr2 (90-185)||(18962086-18962181)
chr2 (71-185)||(11513809-11513920)
chr2 (124-185)||(8017395-8017456)
chr2 (94-185)||(10143103-10143194)
chr2 (82-177)||(11344340-11344435)
chr2 (90-165)||(33267584-33267659)
chr2 (95-181)||(2416245-2416331)
chr2 (70-163)||(11393725-11393818)
chr2 (70-163)||(11410386-11410479)
chr2 (84-185)||(17952749-17952850)
chr2 (71-196)||(42817413-42817538)
chr2 (100-196)||(15377702-15377798)
chr2 (57-160)||(13630354-13630457)
chr2 (134-185)||(18066099-18066150)
chr2 (72-163)||(28803576-28803667)
chr2 (123-185)||(9556199-9556261)
chr2 (72-165)||(34339032-34339125)
chr2 (77-181)||(35755554-35755658)
chr2 (105-181)||(39567845-39567921)
chr2 (73-165)||(44600448-44600543)
chr2 (123-194)||(1056392-1056462)
chr2 (94-153)||(3611157-3611216)
chr2 (130-185)||(12464521-12464576)
chr2 (114-196)||(656814-656896)
chr2 (143-193)||(680483-680533)
chr2 (72-161)||(5133683-5133770)
chr2 (123-181)||(34339866-34339924)
chr2 (116-182)||(42592292-42592358)
chr2 (95-185)||(43199346-43199436)
chr2 (68-181)||(1493565-1493678)
chr2 (84-196)||(13864571-13864681)
chr2 (120-165)||(16451082-16451127)
chr2 (144-193)||(25800810-25800859)
chr2 (84-161)||(37053515-37053592)
chr2 (116-185)||(41875701-41875770)
chr2 (54-179)||(3235438-3235563)
chr2 (90-158)||(35809860-35809927)
chr2 (94-181)||(1646945-1647032)
chr2 (71-157)||(32098384-32098473)
chr2 (131-178)||(33944573-33944620)
chr2 (94-185)||(34054949-34055040)
chr2 (104-159)||(40837502-40837557)
chr2 (102-160)||(3423841-3423899)
chr2 (70-160)||(4550684-4550774)
chr2 (130-196)||(9395097-9395163)
chr2 (123-185)||(22681233-22681295)
chr2 (93-163)||(28902007-28902077)
chr2 (94-144)||(29629078-29629128)
chr2 (72-165)||(43808485-43808578)
chr2 (107-185)||(44439408-44439486)
chr2 (112-165)||(3458606-3458659)
chr2 (132-185)||(17221588-17221641)
chr2 (94-163)||(25609727-25609796)
chr2 (130-183)||(28039382-28039435)
chr2 (92-185)||(28933753-28933846)
chr2 (90-163)||(35459837-35459910)
chr2 (117-162)||(36114594-36114639)
chr2 (72-128)||(2400065-2400121)
chr2 (101-165)||(8820341-8820405)
chr2 (74-110)||(9404511-9404547)
chr2 (105-185)||(15866716-15866796)
chr2 (109-161)||(29288613-29288665)
chr2 (101-185)||(29316823-29316907)
chr2 (153-185)||(32848898-32848930)
chr2 (100-152)||(33576675-33576727)
chr2 (130-194)||(43141838-43141902)
[»] chr5 (63 HSPs)
chr5 (71-194)||(29588788-29588910)
chr5 (94-193)||(9202788-9202887)
chr5 (44-160)||(20982208-20982324)
chr5 (69-161)||(37063146-37063238)
chr5 (125-181)||(8158353-8158409)
chr5 (72-136)||(38819672-38819736)
chr5 (71-183)||(39128547-39128659)
chr5 (114-185)||(14295457-14295528)
chr5 (100-185)||(26209461-26209545)
chr5 (136-206)||(7319379-7319449)
chr5 (78-180)||(32059642-32059743)
chr5 (71-185)||(32172561-32172675)
chr5 (100-186)||(33458982-33459068)
chr5 (102-163)||(29117000-29117061)
chr5 (72-156)||(6738484-6738568)
chr5 (101-185)||(7674586-7674670)
chr5 (116-160)||(12595813-12595857)
chr5 (93-196)||(16945020-16945121)
chr5 (144-196)||(32408629-32408681)
chr5 (91-163)||(35135732-35135804)
chr5 (130-185)||(12425538-12425593)
chr5 (71-122)||(27104525-27104576)
chr5 (71-146)||(27106010-27106085)
chr5 (85-196)||(36539668-36539779)
chr5 (102-185)||(38047903-38047986)
chr5 (94-185)||(39105395-39105486)
chr5 (90-153)||(40097483-40097546)
chr5 (114-156)||(10363701-10363743)
chr5 (122-196)||(12975306-12975380)
chr5 (102-160)||(28586839-28586897)
chr5 (134-196)||(35553225-35553287)
chr5 (122-196)||(36639481-36639555)
chr5 (71-140)||(26516206-26516275)
chr5 (101-165)||(465892-465956)
chr5 (103-163)||(985573-985633)
chr5 (75-139)||(10391265-10391329)
chr5 (90-154)||(17756808-17756872)
chr5 (90-186)||(18704083-18704178)
chr5 (117-185)||(26516354-26516422)
chr5 (94-154)||(40048359-40048419)
chr5 (71-142)||(29115304-29115375)
chr5 (91-196)||(34117573-34117675)
chr5 (103-154)||(42583089-42583140)
chr5 (114-152)||(7853609-7853647)
chr5 (114-156)||(10303752-10303794)
chr5 (71-181)||(14716522-14716632)
chr5 (96-178)||(40452224-40452306)
chr5 (90-162)||(912719-912792)
chr5 (117-194)||(2563164-2563241)
chr5 (102-183)||(12407711-12407792)
chr5 (100-185)||(16889672-16889757)
chr5 (122-183)||(18857450-18857511)
chr5 (94-163)||(34112806-34112875)
chr5 (101-142)||(34690812-34690853)
chr5 (70-159)||(35963155-35963244)
chr5 (73-185)||(39141880-39141990)
chr5 (71-163)||(39823191-39823284)
chr5 (101-161)||(4855636-4855696)
chr5 (90-142)||(7096218-7096270)
chr5 (122-154)||(11835236-11835268)
chr5 (71-163)||(14714910-14715001)
chr5 (42-142)||(39257477-39257577)
chr5 (133-185)||(41957499-41957551)
[»] chr3 (63 HSPs)
chr3 (76-185)||(38462194-38462303)
chr3 (122-194)||(37689423-37689495)
chr3 (90-185)||(22232753-22232848)
chr3 (114-193)||(33405207-33405286)
chr3 (114-196)||(52618954-52619036)
chr3 (103-180)||(1395611-1395688)
chr3 (112-161)||(10101548-10101597)
chr3 (112-161)||(10212473-10212522)
chr3 (104-165)||(42809242-42809303)
chr3 (90-169)||(905034-905113)
chr3 (114-169)||(15304411-15304466)
chr3 (90-157)||(44374720-44374787)
chr3 (73-139)||(20173982-20174048)
chr3 (94-196)||(35127408-35127510)
chr3 (71-153)||(39971227-39971309)
chr3 (116-165)||(42808932-42808981)
chr3 (84-160)||(22214754-22214830)
chr3 (130-190)||(25447287-25447347)
chr3 (71-163)||(41028921-41029013)
chr3 (102-153)||(2128331-2128382)
chr3 (102-185)||(3365344-3365427)
chr3 (130-185)||(14145879-14145934)
chr3 (131-194)||(22031164-22031227)
chr3 (90-153)||(36189493-36189556)
chr3 (114-185)||(36783382-36783453)
chr3 (90-193)||(47217284-47217387)
chr3 (65-155)||(3015927-3016016)
chr3 (44-183)||(23785134-23785275)
chr3 (131-185)||(37795564-37795618)
chr3 (102-156)||(48364956-48365010)
chr3 (112-161)||(10357382-10357431)
chr3 (131-196)||(20170745-20170810)
chr3 (133-178)||(21367824-21367869)
chr3 (86-185)||(24158551-24158649)
chr3 (90-191)||(32095233-32095334)
chr3 (114-186)||(34254855-34254928)
chr3 (114-163)||(49586986-49587035)
chr3 (91-163)||(8007765-8007837)
chr3 (72-140)||(16790181-16790249)
chr3 (85-161)||(33307652-33307728)
chr3 (101-193)||(52440702-52440794)
chr3 (37-184)||(21574366-21574511)
chr3 (114-185)||(24887331-24887402)
chr3 (90-185)||(27792799-27792894)
chr3 (73-168)||(32703048-32703143)
chr3 (114-185)||(36646430-36646501)
chr3 (114-177)||(45432995-45433058)
chr3 (130-181)||(48286862-48286913)
chr3 (70-163)||(21862245-21862339)
chr3 (130-196)||(23315593-23315659)
chr3 (95-160)||(20192679-20192744)
chr3 (101-189)||(23815991-23816076)
chr3 (114-159)||(26990685-26990730)
chr3 (122-196)||(33965526-33965602)
chr3 (102-187)||(37788800-37788884)
chr3 (138-183)||(45264416-45264461)
chr3 (73-154)||(49772747-49772828)
chr3 (133-185)||(1217848-1217900)
chr3 (112-180)||(23952159-23952227)
chr3 (105-185)||(24235731-24235811)
chr3 (144-180)||(33306776-33306812)
chr3 (101-157)||(40122828-40122884)
chr3 (71-159)||(51455852-51455939)
[»] chr8 (63 HSPs)
chr8 (70-185)||(31884501-31884616)
chr8 (70-195)||(787144-787269)
chr8 (39-185)||(4558674-4558820)
chr8 (72-194)||(28769378-28769500)
chr8 (76-163)||(37444485-37444573)
chr8 (93-189)||(38874576-38874672)
chr8 (100-163)||(1112790-1112853)
chr8 (71-142)||(34563158-34563229)
chr8 (71-161)||(29699162-29699252)
chr8 (76-161)||(7026644-7026729)
chr8 (101-186)||(12361130-12361215)
chr8 (122-163)||(42237492-42237533)
chr8 (101-182)||(42597339-42597420)
chr8 (101-189)||(7514516-7514604)
chr8 (38-142)||(11119090-11119194)
chr8 (101-184)||(3936787-3936870)
chr8 (95-206)||(12224926-12225037)
chr8 (90-153)||(14482129-14482192)
chr8 (130-185)||(28784843-28784898)
chr8 (130-181)||(35374425-35374476)
chr8 (71-186)||(35869745-35869860)
chr8 (90-157)||(40280281-40280348)
chr8 (122-180)||(8909009-8909067)
chr8 (91-185)||(11188203-11188297)
chr8 (71-177)||(12972764-12972870)
chr8 (90-196)||(13652142-13652248)
chr8 (90-196)||(13710785-13710891)
chr8 (94-160)||(26215427-26215493)
chr8 (113-187)||(27049318-27049391)
chr8 (104-185)||(1470904-1470985)
chr8 (102-183)||(7646145-7646226)
chr8 (44-159)||(8536123-8536237)
chr8 (75-196)||(11813142-11813263)
chr8 (94-163)||(14280471-14280540)
chr8 (104-153)||(32976358-32976407)
chr8 (124-185)||(34770853-34770914)
chr8 (130-182)||(778356-778408)
chr8 (94-154)||(21653012-21653072)
chr8 (72-196)||(29056028-29056151)
chr8 (70-185)||(44617837-44617950)
chr8 (130-185)||(6509351-6509406)
chr8 (94-185)||(10114421-10114511)
chr8 (104-163)||(16210956-16211015)
chr8 (114-157)||(27119984-27120027)
chr8 (94-153)||(37152970-37153029)
chr8 (122-161)||(44168517-44168556)
chr8 (90-152)||(30627983-30628045)
chr8 (80-142)||(40356788-40356850)
chr8 (131-196)||(7918810-7918875)
chr8 (73-153)||(26716518-26716596)
chr8 (130-167)||(29262940-29262977)
chr8 (72-161)||(35453695-35453784)
chr8 (90-159)||(41620365-41620434)
chr8 (130-178)||(773296-773344)
chr8 (130-178)||(787790-787838)
chr8 (115-163)||(3537101-3537149)
chr8 (70-185)||(8062430-8062546)
chr8 (137-185)||(29342259-29342307)
chr8 (139-195)||(30043784-30043840)
chr8 (130-186)||(33209267-33209323)
chr8 (90-185)||(35298525-35298621)
chr8 (81-160)||(41475133-41475213)
chr8 (132-196)||(42215119-42215182)
[»] scaffold0024 (3 HSPs)
scaffold0024 (71-185)||(27484-27598)
scaffold0024 (101-165)||(21346-21410)
scaffold0024 (132-165)||(58906-58939)
[»] chr6 (57 HSPs)
chr6 (71-161)||(8349736-8349826)
chr6 (100-186)||(29274276-29274362)
chr6 (94-183)||(9093606-9093695)
chr6 (114-185)||(1402947-1403018)
chr6 (94-185)||(4006645-4006736)
chr6 (37-163)||(7713899-7714025)
chr6 (75-181)||(22742278-22742384)
chr6 (71-179)||(5550040-5550148)
chr6 (71-194)||(2206498-2206621)
chr6 (71-153)||(6654522-6654605)
chr6 (72-163)||(7351678-7351769)
chr6 (91-194)||(11340664-11340767)
chr6 (59-149)||(4248854-4248944)
chr6 (102-160)||(24836272-24836330)
chr6 (94-191)||(9559584-9559680)
chr6 (72-185)||(32975887-32976000)
chr6 (71-183)||(2514610-2514722)
chr6 (93-185)||(20671913-20672005)
chr6 (72-183)||(33068610-33068722)
chr6 (122-185)||(281896-281959)
chr6 (100-163)||(507157-507220)
chr6 (90-185)||(10016472-10016567)
chr6 (90-165)||(32386167-32386242)
chr6 (90-161)||(32386635-32386706)
chr6 (114-184)||(769090-769160)
chr6 (71-156)||(9732384-9732469)
chr6 (116-169)||(29940749-29940802)
chr6 (71-158)||(1497888-1497976)
chr6 (101-189)||(24476540-24476628)
chr6 (130-198)||(28088257-28088325)
chr6 (91-183)||(33259744-33259836)
chr6 (101-193)||(33736776-33736868)
chr6 (90-161)||(3217262-3217333)
chr6 (125-196)||(3785737-3785808)
chr6 (106-157)||(10728575-10728626)
chr6 (114-161)||(10749300-10749347)
chr6 (90-169)||(21959655-21959734)
chr6 (130-185)||(25426137-25426192)
chr6 (116-167)||(27595633-27595684)
chr6 (130-185)||(31671122-31671177)
chr6 (71-181)||(3155084-3155194)
chr6 (90-160)||(8420270-8420340)
chr6 (71-161)||(9027485-9027575)
chr6 (114-160)||(30537019-30537065)
chr6 (71-137)||(31668781-31668847)
chr6 (114-196)||(33787782-33787864)
chr6 (122-191)||(2735028-2735097)
chr6 (90-163)||(4325378-4325451)
chr6 (134-183)||(7485118-7485167)
chr6 (90-163)||(10452430-10452503)
chr6 (130-167)||(27615339-27615376)
chr6 (130-167)||(27693505-27693542)
chr6 (122-163)||(28621180-28621221)
chr6 (130-163)||(34611839-34611872)
chr6 (124-196)||(3181105-3181177)
chr6 (76-152)||(24332856-24332931)
chr6 (100-160)||(31624195-31624255)
[»] chr4 (80 HSPs)
chr4 (125-193)||(51630073-51630141)
chr4 (72-181)||(25409795-25409904)
chr4 (90-163)||(30024627-30024700)
chr4 (80-185)||(54325085-54325190)
chr4 (90-165)||(22684584-22684659)
chr4 (133-196)||(28300336-28300399)
chr4 (92-181)||(8130103-8130192)
chr4 (102-163)||(26883934-26883995)
chr4 (100-185)||(29263307-29263392)
chr4 (101-185)||(6364087-6364171)
chr4 (84-184)||(30207620-30207719)
chr4 (100-183)||(30338641-30338725)
chr4 (74-185)||(44319861-44319971)
chr4 (43-161)||(24193465-24193583)
chr4 (100-189)||(24160927-24161016)
chr4 (113-193)||(47119005-47119085)
chr4 (106-194)||(49219082-49219170)
chr4 (125-188)||(437477-437540)
chr4 (122-185)||(6978757-6978820)
chr4 (71-163)||(8703690-8703784)
chr4 (71-186)||(24443946-24444061)
chr4 (100-163)||(27043900-27043963)
chr4 (104-183)||(31038917-31038996)
chr4 (130-193)||(32421072-32421135)
chr4 (100-179)||(47946135-47946214)
chr4 (103-166)||(49803151-49803214)
chr4 (103-193)||(3155543-3155633)
chr4 (114-196)||(17884019-17884101)
chr4 (114-196)||(29778747-29778828)
chr4 (130-196)||(35290224-35290290)
chr4 (71-157)||(35727109-35727195)
chr4 (85-155)||(47970240-47970310)
chr4 (71-182)||(50298438-50298546)
chr4 (116-182)||(53626729-53626795)
chr4 (114-163)||(4071833-4071882)
chr4 (116-185)||(26520277-26520346)
chr4 (131-184)||(40174531-40174584)
chr4 (113-196)||(47800580-47800656)
chr4 (71-154)||(485989-486073)
chr4 (90-157)||(4191666-4191734)
chr4 (90-206)||(5219527-5219643)
chr4 (99-191)||(29373929-29374021)
chr4 (125-189)||(42685386-42685450)
chr4 (101-156)||(5131309-5131364)
chr4 (94-153)||(7601690-7601749)
chr4 (94-181)||(11389457-11389544)
chr4 (90-185)||(18630607-18630702)
chr4 (134-181)||(24091434-24091481)
chr4 (39-157)||(25548182-25548298)
chr4 (92-172)||(28623218-28623300)
chr4 (122-165)||(41701509-41701552)
chr4 (122-185)||(43372017-43372080)
chr4 (122-185)||(52746888-52746951)
chr4 (90-160)||(19422345-19422415)
chr4 (116-182)||(22662298-22662364)
chr4 (116-182)||(22666777-22666843)
chr4 (102-236)||(23819029-23819162)
chr4 (122-160)||(42321952-42321990)
chr4 (102-168)||(44119227-44119293)
chr4 (90-180)||(45128363-45128453)
chr4 (70-152)||(51555948-51556030)
chr4 (114-196)||(52735073-52735155)
chr4 (130-163)||(13949914-13949947)
chr4 (144-185)||(20907328-20907369)
chr4 (116-181)||(25885812-25885877)
chr4 (132-185)||(27321877-27321930)
chr4 (100-185)||(53155202-53155285)
chr4 (106-163)||(54327519-54327576)
chr4 (125-185)||(3175913-3175973)
chr4 (93-169)||(4663760-4663836)
chr4 (72-163)||(8422909-8422998)
chr4 (112-160)||(11917508-11917556)
chr4 (132-172)||(21952930-21952970)
chr4 (81-169)||(32724037-32724125)
chr4 (122-182)||(35411064-35411123)
chr4 (135-187)||(44138712-44138764)
chr4 (102-162)||(44249225-44249285)
chr4 (134-194)||(46715036-46715096)
chr4 (94-181)||(49004024-49004109)
chr4 (102-157)||(51044534-51044590)
[»] scaffold0590 (1 HSPs)
scaffold0590 (57-162)||(1145-1250)
[»] scaffold0275 (1 HSPs)
scaffold0275 (57-162)||(2725-2830)
[»] scaffold0549 (2 HSPs)
scaffold0549 (91-194)||(1763-1866)
scaffold0549 (91-194)||(3853-3956)
[»] scaffold0100 (1 HSPs)
scaffold0100 (70-191)||(42524-42644)
[»] scaffold0103 (1 HSPs)
scaffold0103 (103-158)||(51508-51563)
[»] scaffold0508 (1 HSPs)
scaffold0508 (71-161)||(9847-9937)
[»] scaffold0654 (1 HSPs)
scaffold0654 (79-157)||(6713-6791)
[»] scaffold0221 (1 HSPs)
scaffold0221 (94-160)||(20226-20292)
[»] scaffold0014 (1 HSPs)
scaffold0014 (79-157)||(116632-116710)
[»] scaffold0428 (1 HSPs)
scaffold0428 (91-183)||(3832-3924)


Alignment Details
Target: chr7 (Bit Score: 353; Significance: 0; HSPs: 61)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 353; E-Value: 0
Query Start/End: Original strand, 1 - 385
Target Start/End: Original strand, 34440927 - 34441311
Alignment:
Q  1 ttatattatacatatgtaaaatttacaggagaaaactaggtcttgtttgcattaaaaacttcatttagtacttatagcataaacacttgtcatataaggg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||    
T  34440927 ttatattatacatatgtaaaatttacaggagaaaactaggtcttgtttgcattaaaaacttcatttagtacttatagcatgaacacttgtcgtataaggg 34441026  T
Q  101 cttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagctattttgaagagctcaga 200  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  34441027 cttatgtatacgttattcctctaacaaacgataaaataaagttaaattgtttgcatataagctgtaaactattttcataagctattttgaagagctcaga 34441126  T
Q  201 aaaatagcgtgaaaacaagtcataaacatgtcataaataacctatttccataagttttctcaaacgctaataaataagttcaaactaatcaacccaaaca 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  34441127 aaaatagcgtgaaaacaagtcataaacatgtcataaataacctatttccataagttttctcaaacgccaataaataagctcaaactaatcaacccaaaca 34441226  T
Q  301 cgctcttagaatgcaatttgtaaatttttgtcttagtagatttcctacttgtcaattgttacaaattcaatattgtctcatgatg 385  Q
    ||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34441227 cgctcttagaatataatttgtaaatttttgtcttagtagatttcctacttgtcaattgttacaaattcaatattgtctcatgatg 34441311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 90 - 161
Target Start/End: Original strand, 35536034 - 35536105
Alignment:
Q  90 tcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataag 161  Q
    |||||||| |||||||||||| | ||||||| ||||| | ||||||||||||| ||||||||||||||||||    
T  35536034 tcatataaaggcttatgtataagctatttctataacataagataaaataaagtcaaattgttttcatataag 35536105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 73 - 183
Target Start/End: Complemental strand, 9527250 - 9527140
Alignment:
Q  73 tatagcataaacacttgtcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactat 172  Q
    ||||| |||||||||| ||||| ||| |||||| |||||| ||| ||| ||||||| |||| |||||||| ||| ||||||||||||| || |||  | |    
T  9527250 tatagtataaacacttatcatacaagtgcttatatatacgctatatctataacaaaagatataataaagtcaaactgttttcatataaactataagttgt 9527151  T
Q  173 tttcataagct 183  Q
    |||||||||||    
T  9527150 tttcataagct 9527140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 95 - 185
Target Start/End: Original strand, 28165023 - 28165113
Alignment:
Q  95 taagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagctat 185  Q
    |||| ||||||||||| ||| ||||| ||||||| |||||||| |||| |||||||||| ||||||||| |||||| | || |||||||||    
T  28165023 taagtgcttatgtataagttctttctataacaaaagataaaatgaagtcaaattgttttaatataagctataaactgtctttataagctat 28165113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 101 - 165
Target Start/End: Complemental strand, 27121718 - 27121654
Alignment:
Q  101 cttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgt 165  Q
    |||||||||| | ||||||| ||| ||| ||||||||||||| ||||||||||||||||||||||    
T  27121718 cttatgtataagatatttctataataaatgataaaataaagtcaaattgttttcatataagctgt 27121654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 90 - 185
Target Start/End: Original strand, 991997 - 992092
Alignment:
Q  90 tcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagctat 185  Q
    ||||||||| ||||| ||||| ||| ||||| |||||||  |||||||||||  ||| | |||||||||||| | |||||| ||||||||||||||    
T  991997 tcatataagtgcttacgtataagttgtttctataacaaaaaataaaataaagacaaaatattttcatataaggtataaacttttttcataagctat 992092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 103 - 194
Target Start/End: Original strand, 7623078 - 7623169
Alignment:
Q  103 tatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagctattttgaagag 194  Q
    |||||||| ||||||| | ||||||| | |||||||||||  || | |||| ||||||||||||| |||||||||||| |||| ||||||||    
T  7623078 tatgtataagttatttttataacaaaaggtaaaataaagtccaactctttttatataagctgtaagctattttcataaactatcttgaagag 7623169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 114 - 185
Target Start/End: Original strand, 21453245 - 21453316
Alignment:
Q  114 tatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagctat 185  Q
    ||||||| ||||||| ||||| ||||||| || ||||| ||||||||||| |||||| ||||||||||||||    
T  21453245 tatttctgtaacaaaagataagataaagtcaagttgttctcatataagctataaactgttttcataagctat 21453316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 114 - 185
Target Start/End: Complemental strand, 40689105 - 40689034
Alignment:
Q  114 tatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagctat 185  Q
    ||||||| || |||| ||||||||||||||||||| |||||||||||||| ||| || | ||||||||||||    
T  40689105 tatttctatagcaaaagataaaataaagttaaattattttcatataagctataagctgtgttcataagctat 40689034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 71 - 185
Target Start/End: Complemental strand, 27481456 - 27481342
Alignment:
Q  71 cttatagcataaacacttgtcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaact 170  Q
    |||||||||||||   || | ||||||| | ||||||||| | ||||||| ||||||| |||||||  |||| ||| ||||| |||||||||| |||  |    
T  27481456 cttatagcataaatgtttattatataagtgtttatgtataagctatttctataacaaaggataaaacgaagtcaaactgtttccatataagctataagtt 27481357  T
Q  171 attttcataagctat 185  Q
    |||||||||||||||    
T  27481356 attttcataagctat 27481342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 79 - 185
Target Start/End: Original strand, 27548179 - 27548285
Alignment:
Q  79 ataaacacttgtcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcat 178  Q
    ||||||| || || |||||| |||||| |||| | ||||||  || |||| |||||||||||||  |||||||||||| |||||| ||| || |||||||    
T  27548179 ataaacatttatcttataagtgcttatctataagctatttccttagcaaaagataaaataaagtctaattgttttcatttaagctataagctgttttcat 27548278  T
Q  179 aagctat 185  Q
    |||||||    
T  27548279 aagctat 27548285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 107 - 161
Target Start/End: Complemental strand, 39591593 - 39591539
Alignment:
Q  107 tatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataag 161  Q
    |||| ||||||||| ||||||| ||||||||||||| ||||||||||||||||||    
T  39591593 tataagttatttctataacaaaagataaaataaagtcaaattgttttcatataag 39591539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 78 - 163
Target Start/End: Complemental strand, 3610895 - 3610810
Alignment:
Q  78 cataaacacttgtcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagct 163  Q
    ||||||||||||||||||||| ||||||||||| | |||||||  |||||| |||||||| |||  ||| ||||||  ||||||||    
T  3610895 cataaacacttgtcatataagtgcttatgtataagctatttctacaacaaaagataaaatgaaggcaaactgttttggtataagct 3610810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 103 - 184
Target Start/End: Complemental strand, 5006639 - 5006558
Alignment:
Q  103 tatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagcta 184  Q
    |||||||| | |||| || ||||||| ||||||||||||| ||| |||||||||||||| | |||| | |||||||||||||    
T  5006639 tatgtataagctattcctataacaaaagataaaataaagtcaaactgttttcatataaggtataaattgttttcataagcta 5006558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 101 - 180
Target Start/End: Complemental strand, 1432099 - 1432017
Alignment:
Q  101 cttatgtatacgttatttctctaacaaacgataaaat---aaagttaaattgttttcatataagctgtaaactattttcataa 180  Q
    |||||||||| ||||||||| ||||||| ||||||||   ||||||||||| |||||||||||||| | | || |||||||||    
T  1432099 cttatgtataagttatttctataacaaaagataaaataaaaaagttaaattattttcatataagctatcagctgttttcataa 1432017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 44 - 185
Target Start/End: Original strand, 22759065 - 22759208
Alignment:
Q  44 tgtttgcattaaaaacttcatttagtacttatagcataaacacttgt--catataagggcttatgtatacgttatttctctaacaaacgataaaataaag 141  Q
    |||||| || || ||||| ||| || |||||||| ||||||| || |  |||||||| | |||||| || | ||||| | ||||||| ||||||||||||    
T  22759065 tgtttggataaacaacttaattaagcacttatagtataaacatttttatcatataagcgtttatgtttaagctatttgtataacaaaagataaaataaag 22759164  T
Q  142 ttaaattgttttcatataagctgtaaactattttcataagctat 185  Q
      ||||||||||||||||||||  || ||  |||||||||||||    
T  22759165 gaaaattgttttcatataagctaaaagctgatttcataagctat 22759208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 117 - 185
Target Start/End: Original strand, 46825052 - 46825120
Alignment:
Q  117 ttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagctat 185  Q
    |||| ||| ||| ||||||||||||| |||||||||||||||||||  |||||  ||||||||||||||    
T  46825052 ttctataaaaaaagataaaataaagtcaaattgttttcatataagccataaaccgttttcataagctat 46825120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 102 - 186
Target Start/End: Complemental strand, 48157251 - 48157167
Alignment:
Q  102 ttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagctatt 186  Q
    |||||||||  |||||||| ||| ||| ||||||||||||| |||||||||| ||||||||| |||  | |||||| ||||||||    
T  48157251 ttatgtataacttatttctataataaaagataaaataaagtgaaattgttttaatataagctataatttgttttcacaagctatt 48157167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 93 - 184
Target Start/End: Original strand, 1417194 - 1417285
Alignment:
Q  93 tataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagcta 184  Q
    |||| ||| |||||||||   ||||| | ||||||| ||||||||||||| |||||||||||||||||||  |||  | |||||||||||||    
T  1417194 tatacgggtttatgtataaactatttatataacaaaagataaaataaagtcaaattgttttcatataagcaataagttgttttcataagcta 1417285  T

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Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 94 - 153
Target Start/End: Complemental strand, 8960766 - 8960707
Alignment:
Q  94 ataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgtttt 153  Q
    ||||||||||||||||| | |||| || || |||| ||||||||||||||||||||||||    
T  8960766 ataagggcttatgtatatgctattcctatagcaaatgataaaataaagttaaattgtttt 8960707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 130 - 193
Target Start/End: Original strand, 12110327 - 12110390
Alignment:
Q  130 gataaaataaagttaaattgttttcatataagctgtaaactattttcataagctattttgaaga 193  Q
    ||||||||||||| ||||||||||  |||||||| ||| || |||||||||||||| |||||||    
T  12110327 gataaaataaagtcaaattgttttggtataagctataagctgttttcataagctatcttgaaga 12110390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 74 - 161
Target Start/End: Original strand, 19624137 - 19624224
Alignment:
Q  74 atagcataaacacttgtcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataag 161  Q
    ||||||||||||||| |||||||||||||||| |||| | ||||||| ||| | | |  |||||||||| ||| | ||||||||||||    
T  19624137 atagcataaacacttatcatataagggcttatatataagatatttctataagataaggcaaaataaagtaaaactattttcatataag 19624224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 71 - 193
Target Start/End: Complemental strand, 22388066 - 22387943
Alignment:
Q  71 cttatagcataaacacttgtcatataagggcttatgtatacgttatttctctaacaaacgataaa---ataaagttaaattgttttcatataagctgtaa 167  Q
    |||||| ||||||||||| |||| |||| ||||||| ||| | ||||||| ||||||| ||||||   ||||||| ||||| |||||| ||||||| |||    
T  22388066 cttataacataaacacttatcatttaagtgcttatggataagctatttctataacaaaagataaaagtataaagtcaaattcttttca-ataagctataa 22387968  T
Q  168 actattttcataagctattttgaaga 193  Q
    | || ||| |||| ||||||||||||    
T  22387967 a-tagttttataaactattttgaaga 22387943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 90 - 161
Target Start/End: Complemental strand, 45593862 - 45593791
Alignment:
Q  90 tcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataag 161  Q
    ||||||||  ||||||||||| | ||||||| |||||||  |||||||||||| ||| ||||||||||||||    
T  45593862 tcatataaatgcttatgtataagctatttctgtaacaaaacataaaataaagtcaaactgttttcatataag 45593791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 112 - 163
Target Start/End: Complemental strand, 47046229 - 47046178
Alignment:
Q  112 gttatttctctaacaaacgataaaataaagttaaattgttttcatataagct 163  Q
    |||||||||  |||||| ||||||||||||| ||||||||||||||||||||    
T  47046229 gttatttctacaacaaaggataaaataaagtcaaattgttttcatataagct 47046178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 102 - 192
Target Start/End: Original strand, 23918896 - 23918986
Alignment:
Q  102 ttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagctattttgaag 192  Q
    |||||| || ||||| ||| | ||||| ||||||||||||| |||||||||||||||||||| ||| || |  |||||| ||||| |||||    
T  23918896 ttatgtgtaagttatctctattacaaaagataaaataaagtcaaattgttttcatataagctataatctgtaatcataaactattctgaag 23918986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 114 - 180
Target Start/End: Complemental strand, 39551667 - 39551601
Alignment:
Q  114 tatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataa 180  Q
    ||||||| ||||||| |||| | |||||| ||| |||||||||||||||| ||| ||||||||||||    
T  39551667 tatttctataacaaaagatatactaaagtaaaactgttttcatataagctataatctattttcataa 39551601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 114 - 164
Target Start/End: Complemental strand, 43318647 - 43318597
Alignment:
Q  114 tatttctctaacaaacgataaaataaagttaaattgttttcatataagctg 164  Q
    ||||||| ||||||| ||||||||||||| |||||||| ||||||||||||    
T  43318647 tatttctataacaaatgataaaataaagtcaaattgttatcatataagctg 43318597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 72 - 185
Target Start/End: Original strand, 47177544 - 47177658
Alignment:
Q  72 ttatagcataaacacttgtcat-ataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaact 170  Q
    ||||||||||| ||||| | || |||||  ||| |||||| | ||||||| || ||||  | |||| |||||||||||||||||||||||||| ||| ||    
T  47177544 ttatagcataagcacttatgatgataagcccttctgtataaggtatttctatatcaaaatacaaaacaaagttaaattgttttcatataagctataagct 47177643  T
Q  171 attttcataagctat 185  Q
     |||||| |||||||    
T  47177644 gttttcaaaagctat 47177658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 96 - 185
Target Start/End: Complemental strand, 22296364 - 22296276
Alignment:
Q  96 aagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagctat 185  Q
    ||||||||||||||  ||||||||| || | || ||||||||||||||||||| ||||| ||||| || |||| | ||||||||| ||||    
T  22296364 aagggcttatgtatttgttatttctatagcgaa-gataaaataaagttaaattattttcctataacctataaattgttttcataaactat 22296276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 90 - 159
Target Start/End: Original strand, 24973871 - 24973940
Alignment:
Q  90 tcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatata 159  Q
    ||||||||| ||||||||| | | ||||||| ||||||| ||||||||||| | ||||||||| ||||||    
T  24973871 tcatataagtgcttatgtaaaagctatttctataacaaaagataaaataaattcaaattgtttccatata 24973940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 90 - 163
Target Start/End: Complemental strand, 26935693 - 26935620
Alignment:
Q  90 tcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagct 163  Q
    ||||||||| |||| ||| || | ||||| | ||||||| |||||||||| |||||||||||||||||| ||||    
T  26935693 tcatataagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaattgttttcatatgagct 26935620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 92 - 185
Target Start/End: Complemental strand, 28340985 - 28340892
Alignment:
Q  92 atataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagctat 185  Q
    ||||||| |||||| |||| | ||||| | ||| ||| ||| |||| |||| |||||||| ||||||||||| ||| || ||||||||||||||    
T  28340985 atataagtgcttatctatatgctatttttataataaaagatgaaatgaagtcaaattgttgtcatataagctataagctgttttcataagctat 28340892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 90 - 163
Target Start/End: Original strand, 33894550 - 33894622
Alignment:
Q  90 tcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagct 163  Q
    |||| |||| ||||||||||| | ||||||| ||||||| |||||||| |||| ||| ||||||||||||||||    
T  33894550 tcatgtaagtgcttatgtataagctatttctataacaaaagataaaat-aagtcaaactgttttcatataagct 33894622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 114 - 187
Target Start/End: Original strand, 35266850 - 35266923
Alignment:
Q  114 tatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagctattt 187  Q
    ||||||| ||||||| ||| ||||||||||||||| |||||||||||  | |||| | ||||||| ||||||||    
T  35266850 tatttctataacaaatgattaaataaagttaaatttttttcatataaattataaaatgttttcatgagctattt 35266923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 102 - 179
Target Start/End: Original strand, 49060479 - 49060556
Alignment:
Q  102 ttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcata 179  Q
    ||||||||| | ||||||| |||||||  |||||||||||| ||||| |||| ||||||||| |||  ||||||||||    
T  49060479 ttatgtataagctatttctataacaaaaaataaaataaagtcaaattatttttatataagctataagttattttcata 49060556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 105 - 153
Target Start/End: Complemental strand, 43153030 - 43152982
Alignment:
Q  105 tgtatacgttatttctctaacaaacgataaaataaagttaaattgtttt 153  Q
    |||||| | ||||||| ||||||| ||||||||||||||||||||||||    
T  43153030 tgtataagctatttctataacaaaagataaaataaagttaaattgtttt 43152982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 90 - 181
Target Start/End: Complemental strand, 5628709 - 5628618
Alignment:
Q  90 tcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataag 181  Q
    ||||| ||||||||||| ||| | ||||| | ||||||| ||||||||| |||| || ||||||||| |||| | ||| || ||||||||||    
T  5628709 tcatacaagggcttatgcataagctatttttataacaaatgataaaatagagttgaactgttttcatttaagatataagctgttttcataag 5628618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 90 - 157
Target Start/End: Original strand, 7244629 - 7244696
Alignment:
Q  90 tcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcata 157  Q
    ||||||||| ||||||||||| | ||||||| || |||| ||||||| ||||| ||| ||||||||||    
T  7244629 tcatataagtgcttatgtataagctatttctatatcaaaagataaaagaaagtcaaactgttttcata 7244696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 93 - 152
Target Start/End: Complemental strand, 21853256 - 21853197
Alignment:
Q  93 tataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttt 152  Q
    |||||| | |||| |||| ||||||||| | ||||| |||||||||||||||||||||||    
T  21853256 tataagtgattatatataagttatttctattacaaaagataaaataaagttaaattgttt 21853197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 113 - 180
Target Start/End: Complemental strand, 22283863 - 22283797
Alignment:
Q  113 ttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataa 180  Q
    |||||||| || |||| ||||||||||||||||||||||||  ||| |||| |||||| |||||||||    
T  22283863 ttatttctatagcaaa-gataaaataaagttaaattgtttttgtatcagctataaactgttttcataa 22283797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 114 - 161
Target Start/End: Complemental strand, 30456569 - 30456522
Alignment:
Q  114 tatttctctaacaaacgataaaataaagttaaattgttttcatataag 161  Q
    |||||||  |||||| ||||||||||||| ||||||||||||||||||    
T  30456569 tatttctaaaacaaaagataaaataaagtcaaattgttttcatataag 30456522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 114 - 181
Target Start/End: Complemental strand, 34083644 - 34083577
Alignment:
Q  114 tatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataag 181  Q
    ||||||| || |||| |||||||||||||||||||||||   |||||||| ||| || ||||||||||    
T  34083644 tatttctatagcaaaagataaaataaagttaaattgtttgtgtataagctataagctgttttcataag 34083577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 131 - 170
Target Start/End: Original strand, 40428523 - 40428562
Alignment:
Q  131 ataaaataaagttaaattgttttcatataagctgtaaact 170  Q
    |||||||||||||||||| |||||||||||||| ||||||    
T  40428523 ataaaataaagttaaattattttcatataagctataaact 40428562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 130 - 193
Target Start/End: Complemental strand, 46104405 - 46104342
Alignment:
Q  130 gataaaataaagttaaattgttttcatataagctgtaaactattttcataagctattttgaaga 193  Q
    |||||||||||  |||| ||||||| |||||||| |||||| |||||||||| ||| |||||||    
T  46104405 gataaaataaatctaaactgttttcgtataagctataaactgttttcataagttatcttgaaga 46104342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 72 - 142
Target Start/End: Complemental strand, 753365 - 753295
Alignment:
Q  72 ttatagcataaacacttgtcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagt 142  Q
    |||||||||||||| || ||||||||| |||| |||||||  ||||||| |||||||  || |||||||||    
T  753365 ttatagcataaacatttatcatataagcgcttgtgtatacactatttctataacaaaatatgaaataaagt 753295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 125 - 163
Target Start/End: Original strand, 30180013 - 30180051
Alignment:
Q  125 caaacgataaaataaagttaaattgttttcatataagct 163  Q
    |||| ||||||||||||||||||||||||| ||||||||    
T  30180013 caaaagataaaataaagttaaattgttttcgtataagct 30180051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 123 - 185
Target Start/End: Original strand, 38010674 - 38010736
Alignment:
Q  123 aacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagctat 185  Q
    |||||| ||||||| ||||  |||||||||||||||||||| ||| || ||||||||| ||||    
T  38010674 aacaaaagataaaacaaagccaaattgttttcatataagctataagctgttttcataatctat 38010736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 163
Target Start/End: Complemental strand, 2767297 - 2767248
Alignment:
Q  114 tatttctctaacaaacgataaaataaagttaaattgttttcatataagct 163  Q
    ||||||| ||||||| |||||||||||  ||||||||||||| |||||||    
T  2767297 tatttctataacaaaagataaaataaatataaattgttttcacataagct 2767248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 163
Target Start/End: Complemental strand, 12835056 - 12835007
Alignment:
Q  114 tatttctctaacaaacgataaaataaagttaaattgttttcatataagct 163  Q
    |||||||  |||||| ||||||||||||| ||||||||||||||| ||||    
T  12835056 tatttctacaacaaaagataaaataaagtcaaattgttttcatattagct 12835007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 104 - 157
Target Start/End: Original strand, 28178910 - 28178963
Alignment:
Q  104 atgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcata 157  Q
    ||||||| | ||||||| ||||||| ||||||||||||| | ||||||||||||    
T  28178910 atgtataagctatttctataacaaaagataaaataaagtcatattgttttcata 28178963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 160
Target Start/End: Original strand, 28440431 - 28440516
Alignment:
Q  75 tagcataaacacttgtcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataa 160  Q
    |||||||||||||  ||||||||| | ||| | ||| | ||||||  ||||||| ||||||||||||| |||| |||||| |||||    
T  28440431 tagcataaacactaatcatataagcgattaagaataagctatttcagtaacaaaagataaaataaagtcaaatggttttcgtataa 28440516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 185
Target Start/End: Original strand, 39907772 - 39907825
Alignment:
Q  132 taaaataaagttaaattgttttcatataagctgtaaactattttcataagctat 185  Q
    |||||||| |||||||||||||  |||||||| |||||| ||||||||| ||||    
T  39907772 taaaataaggttaaattgtttttgtataagctataaactgttttcataaactat 39907825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 47795926 - 47795971
Alignment:
Q  134 aaataaagttaaattgttttcatataagctgtaaactattttcata 179  Q
    |||| ||||||||||||||| ||||||||| |||||| ||||||||    
T  47795926 aaattaagttaaattgtttttatataagctataaactgttttcata 47795971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 94 - 142
Target Start/End: Original strand, 2176840 - 2176888
Alignment:
Q  94 ataagggcttatgtatacgttatttctctaacaaacgataaaataaagt 142  Q
    ||||||||||||||||||  ||||||  ||||||| |||||||||||||    
T  2176840 ataagggcttatgtatacactatttcagtaacaaaagataaaataaagt 2176888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 90 - 142
Target Start/End: Original strand, 5373152 - 5373204
Alignment:
Q  90 tcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagt 142  Q
    |||| |||| ||||||||||| | ||||||| ||||||| |||||||||||||    
T  5373152 tcatgtaagtgcttatgtatatgctatttctataacaaaagataaaataaagt 5373204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 134 - 186
Target Start/End: Original strand, 10190766 - 10190818
Alignment:
Q  134 aaataaagttaaattgttttcatataagctgtaaactattttcataagctatt 186  Q
    ||||||||| ||| ||||||||||||| ||||||| | ||||||||| |||||    
T  10190766 aaataaagtcaaactgttttcatataaactgtaaattgttttcataaactatt 10190818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 102 - 194
Target Start/End: Original strand, 30133988 - 30134080
Alignment:
Q  102 ttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagctattttgaagag 194  Q
    ||||||||| | ||||| |  |||||| ||||||||||||| || |||||||| |||||||| ||| ||  ||||| ||| ||| ||||||||    
T  30133988 ttatgtataagctatttttacaacaaaagataaaataaagtcaacttgttttcgtataagctttaagctgatttcacaagttatcttgaagag 30134080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 102 - 185
Target Start/End: Original strand, 44686867 - 44686951
Alignment:
Q  102 ttatgtatacgttatttctctaacaaacgataaaa-taaagttaaattgttttcatataagctgtaaactattttcataagctat 185  Q
    |||||||||| |||||||| |||||||  | |||| |||||| ||| ||||||| |||||| | || | ||||||||||||||||    
T  44686867 ttatgtatacattatttctttaacaaaatacaaaaataaagtgaaaatgttttcttataaggtatacaatattttcataagctat 44686951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 100 - 160
Target Start/End: Complemental strand, 45813313 - 45813253
Alignment:
Q  100 gcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataa 160  Q
    |||||| |||| | ||||||| || |||| ||||||||||||| || ||||||||||||||    
T  45813313 gcttatttataagctatttctataccaaaagataaaataaagtcaacttgttttcatataa 45813253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 71 - 163
Target Start/End: Complemental strand, 47528095 - 47528003
Alignment:
Q  71 cttatagcataaacacttgtcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagct 163  Q
    |||||||||||||||||| | ||| ||| | ||||||||| | ||||||| |||  || ||||||||||| || || |||||| | |||||||    
T  47528095 cttatagcataaacacttattatacaagtgtttatgtataagctatttctataattaaggataaaataaaattcaactgtttttacataagct 47528003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 64; Significance: 7e-28; HSPs: 83)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 71 - 194
Target Start/End: Complemental strand, 4363793 - 4363671
Alignment:
Q  71 cttatagcataaacacttgtcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaact 170  Q
    |||||||||||||||||||||||||||| ||||||||||||  ||||| | ||||||| ||| |||||| || ||| |||||||||||||||| ||| ||    
T  4363793 cttatagcataaacacttgtcatataagtgcttatgtatactctattt-tataacaaaagattaaataatgtcaaactgttttcatataagctataacct 4363695  T
Q  171 attttcataagctattttgaagag 194  Q
    |||||||||||||||  |||||||    
T  4363694 attttcataagctatcctgaagag 4363671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 90 - 196
Target Start/End: Complemental strand, 44032142 - 44032036
Alignment:
Q  90 tcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagctattttg 189  Q
    ||||||||| | ||||||||| |   ||||| ||||||| | ||||||||||| |||||||||||||||||||| |||||||||||| |||| ||| |||    
T  44032142 tcatataagtgtttatgtataagccgtttctataacaaaagctaaaataaagtcaaattgttttcatataagctataaactattttcttaagttatcttg 44032043  T
Q  190 aagagct 196  Q
    |||||||    
T  44032042 aagagct 44032036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 90 - 194
Target Start/End: Original strand, 52286605 - 52286709
Alignment:
Q  90 tcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagctattttg 189  Q
    ||||||||| ||||||| ||| | |||||||  |||||| |||||||||||||||||   |||||||||||||| |||||||||||||||||  || |||    
T  52286605 tcatataagcgcttatgaataagatatttctacaacaaaagataaaataaagttaaacaattttcatataagctataaactattttcataagtcatcttg 52286704  T
Q  190 aagag 194  Q
    |||||    
T  52286705 aagag 52286709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 105 - 184
Target Start/End: Original strand, 49517012 - 49517091
Alignment:
Q  105 tgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagcta 184  Q
    |||||| ||||||||| ||||||| ||||||||||||| ||||||||||||| |||||| ||| || |||||||||||||    
T  49517012 tgtataagttatttctataacaaaagataaaataaagtcaaattgttttcatttaagctataagctgttttcataagcta 49517091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 102 - 196
Target Start/End: Complemental strand, 48830207 - 48830113
Alignment:
Q  102 ttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagctattttgaagagct 196  Q
    ||||||||| ||||||||| | || || ||||||||||||| ||| | |||||||||||||| |||||| ||||||||||||||| | |||||||    
T  48830207 ttatgtataagttatttctattaccaaagataaaataaagtcaaactattttcatataagctataaactgttttcataagctattctaaagagct 48830113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 107 - 183
Target Start/End: Original strand, 11211062 - 11211138
Alignment:
Q  107 tatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagct 183  Q
    |||| |||||||||  |||||| ||||||||||||||||||| |||||||||||| |  ||||||||||||||||||    
T  11211062 tataagttatttctagaacaaaagataaaataaagttaaatttttttcatataagataaaaactattttcataagct 11211138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 90 - 185
Target Start/End: Original strand, 17269177 - 17269272
Alignment:
Q  90 tcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagctat 185  Q
    ||||||||| ||||||||||| |||||||||  |||||| |  |||||||||| |||||||||||||||||||  |||  | ||||||||||||||    
T  17269177 tcatataagtgcttatgtataagttatttctagaacaaaagtgaaaataaagtcaaattgttttcatataagcaataagttgttttcataagctat 17269272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 73 - 163
Target Start/End: Original strand, 4200139 - 4200229
Alignment:
Q  73 tatagcataaacacttgtcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagct 163  Q
    |||||||||| ||||| |||| |||| | |||| |||| ||||||| | ||||||| ||||||||||||| || |||||||||||||||||    
T  4200139 tatagcataagcacttatcatctaagtgtttatatataagttatttttataacaaaagataaaataaagtcaagttgttttcatataagct 4200229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 72 - 165
Target Start/End: Original strand, 27140391 - 27140487
Alignment:
Q  72 ttatagcataaacacttgtcatata---agggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgt 165  Q
    ||||||||||||||||| |||||||   || | |||||| || ||||||||| ||||||| ||||||||||  |||||||||||| |||||||||||    
T  27140391 ttatagcataaacacttatcatatactaagtgtttatgtgtaagttatttctataacaaaagataaaataatattaaattgtttttatataagctgt 27140487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 73 - 169
Target Start/End: Complemental strand, 43372119 - 43372023
Alignment:
Q  73 tatagcataaacacttgtcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaac 169  Q
    |||||||||| | ||| |||||||| |||||||||||| | ||||||| ||||||  ||||||||| ||| ||||| |||||| ||||||| |||||    
T  43372119 tatagcataagcgcttatcatataatggcttatgtataggctatttctataacaatagataaaatagagtcaaattattttcacataagctataaac 43372023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 71 - 163
Target Start/End: Original strand, 49557049 - 49557141
Alignment:
Q  71 cttatagcataaacacttgtcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagct 163  Q
    |||||| | ||| ||||| ||||||||| |||  |||||| ||||||||| ||||||| |||||||||||||||||| || ||||| ||||||    
T  49557049 cttataacgtaatcacttatcatataagtgctgctgtataagttatttctataacaaaagataaaataaagttaaatagtattcatttaagct 49557141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 73 - 196
Target Start/End: Complemental strand, 7274099 - 7273976
Alignment:
Q  73 tatagcataaacacttgtcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactat 172  Q
    ||||||||||   ||| ||||||||  ||||||||||| ||||||| | ||||||| ||| ||||||||| |||||||||||||| ||| | ||| || |    
T  7274099 tatagcataagtgcttatcatataaatgcttatgtatatgttatttttataacaaaagatgaaataaagtcaaattgttttcatacaagttataagctgt 7274000  T
Q  173 tttcataagctattttgaagagct 196  Q
    || ||||| |||  ||||||||||    
T  7273999 ttccataaactaccttgaagagct 7273976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 123 - 185
Target Start/End: Complemental strand, 27738290 - 27738228
Alignment:
Q  123 aacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagctat 185  Q
    |||||| ||||||||||||| |||||||||||||||||||| |||  | ||||||||||||||    
T  27738290 aacaaaagataaaataaagtcaaattgttttcatataagctataatttgttttcataagctat 27738228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 74 - 163
Target Start/End: Original strand, 37841908 - 37841998
Alignment:
Q  74 atagcataaacacttgtcat-ataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagct 163  Q
    ||||||||| ||||| |||| |||||  || ||||||| | |||| || ||||||| ||||||||||||||||||||||||| ||||||||    
T  37841908 atagcataagcacttatcatgataagtactcatgtataagctattcctataacaaatgataaaataaagttaaattgttttcgtataagct 37841998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 102 - 163
Target Start/End: Original strand, 15360833 - 15360894
Alignment:
Q  102 ttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagct 163  Q
    ||||||||  ||||||||| ||||||| ||||||||||||| ||| ||||||||||||||||    
T  15360833 ttatgtattagttatttctataacaaaagataaaataaagtcaaactgttttcatataagct 15360894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 116 - 185
Target Start/End: Complemental strand, 25006151 - 25006082
Alignment:
Q  116 tttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagctat 185  Q
    ||||| ||||| ||| ||||||||||| |||||||||||||||||||| |||  | ||||||||||||||    
T  25006151 tttctataacagacggtaaaataaagtcaaattgttttcatataagctataagttgttttcataagctat 25006082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 113 - 185
Target Start/End: Original strand, 9656600 - 9656672
Alignment:
Q  113 ttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagctat 185  Q
    |||||||| || ||||  |||||||||||||||||| |||||||||||||| ||| || | ||||||||||||    
T  9656600 ttatttctatagcaaaaaataaaataaagttaaattattttcatataagctataagctgtgttcataagctat 9656672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 86 - 238
Target Start/End: Complemental strand, 18421001 - 18420849
Alignment:
Q  86 cttgtcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagctat 185  Q
    ||||||||||||| |||| |||||    |||||||   ||||| ||||||||||||| ||| |||| ||||||||||| ||  ||||||||| ||| |||    
T  18421001 cttgtcatataagtgcttgtgtattacctatttctagcacaaaagataaaataaagtcaaaatgttctcatataagctatatgctattttcacaagttat 18420902  T
Q  186 tttgaagagctcagaaaaatagcgtgaaaacaagtcataaacatgtcataaat 238  Q
     ||| |||||| | |||||||   ||| ||||  | |||||||||||||||||    
T  18420901 cttggagagcttacaaaaataagttgagaacactttataaacatgtcataaat 18420849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 94 - 185
Target Start/End: Complemental strand, 23544779 - 23544687
Alignment:
Q  94 ataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagct-gtaaactattttcataagctat 185  Q
    ||||| ||||||||||| | ||||||| |   ||| |||||||| |||| ||||||||||||||||||||  |||||| ||||||||||||||    
T  23544779 ataagcgcttatgtataagctatttctatggaaaaagataaaattaagtcaaattgttttcatataagctattaaactgttttcataagctat 23544687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 130 - 185
Target Start/End: Original strand, 6279366 - 6279421
Alignment:
Q  130 gataaaataaagttaaattgttttcatataagctgtaaactattttcataagctat 185  Q
    |||||||||||   ||||||||||| |||||||| |||||||||||||||||||||    
T  6279366 gataaaataaaaacaaattgttttcgtataagctttaaactattttcataagctat 6279421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 114 - 185
Target Start/End: Original strand, 26630414 - 26630485
Alignment:
Q  114 tatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagctat 185  Q
    ||||||| |||||||  || ||||||||| |||||||||||||||||||| |||||| |||| ||| |||||    
T  26630414 tatttctataacaaaaaatgaaataaagtaaaattgttttcatataagctataaactgttttgatacgctat 26630485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 130 - 185
Target Start/End: Complemental strand, 33204491 - 33204436
Alignment:
Q  130 gataaaataaagttaaattgttttcatataagctgtaaactattttcataagctat 185  Q
    |||||||||||||||| || ||||| |||||||||||| || ||||||||||||||    
T  33204491 gataaaataaagttaatttattttcgtataagctgtaagctgttttcataagctat 33204436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 122 - 185
Target Start/End: Complemental strand, 34179983 - 34179920
Alignment:
Q  122 taacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagctat 185  Q
    ||||||| ||||||||||||| |||||||||| || |||||| |||||| ||||||||| ||||    
T  34179983 taacaaaagataaaataaagtcaaattgttttaatctaagctataaactgttttcataaactat 34179920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 94 - 185
Target Start/End: Complemental strand, 45999427 - 45999336
Alignment:
Q  94 ataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagctat 185  Q
    ||||| ||| ||||||| | ||||||| ||||||| ||||| ||||||| ||| || ||||||||||||| ||| | |||||| ||||||||    
T  45999427 ataagtgctcatgtataagctatttctataacaaaagataagataaagtcaaactgctttcatataagctataaccaattttcgtaagctat 45999336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 122 - 196
Target Start/End: Complemental strand, 49365870 - 49365798
Alignment:
Q  122 taacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagctattttgaagagct 196  Q
    ||||||| ||||||||| ||| |||||||||||||| ||||| |||||| |||  ||||||||| ||||||||||    
T  49365870 taacaaaagataaaatagagtcaaattgttttcatacaagctataaactgttt--ataagctatcttgaagagct 49365798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 114 - 180
Target Start/End: Complemental strand, 31517859 - 31517793
Alignment:
Q  114 tatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataa 180  Q
    |||||||  |||||| |||||||||||||||||||| ||||||||||||| ||| || | |||||||    
T  31517859 tatttctacaacaaaagataaaataaagttaaattgatttcatataagctataagctgtcttcataa 31517793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 70 - 173
Target Start/End: Original strand, 47877033 - 47877132
Alignment:
Q  70 acttatagcataaacacttgtcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaac 169  Q
    |||||||||||||  |||| ||||||||  ||||||||||    ||||||  ||||||| ||||||||||| | ||||||||||||||||| || ||| |    
T  47877033 acttatagcataatgacttatcatataattgcttatgtat----tatttcaataacaaaagataaaataaaatcaaattgttttcatataaactataagc 47877128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 112 - 157
Target Start/End: Complemental strand, 14737826 - 14737781
Alignment:
Q  112 gttatttctctaacaaacgataaaataaagttaaattgttttcata 157  Q
    ||||||||| ||||||| ||||||||||||| ||||||||||||||    
T  14737826 gttatttctataacaaaagataaaataaagtcaaattgttttcata 14737781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 114 - 163
Target Start/End: Complemental strand, 15687192 - 15687143
Alignment:
Q  114 tatttctctaacaaacgataaaataaagttaaattgttttcatataagct 163  Q
    ||||||| |||||||  |||||||||||||||||||||||| ||||||||    
T  15687192 tatttctataacaaaatataaaataaagttaaattgttttcgtataagct 15687143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 122 - 195
Target Start/End: Original strand, 30371107 - 30371180
Alignment:
Q  122 taacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagctattttgaagagc 195  Q
    ||||||| ||||||||||| | |||||||||||||||||||| |||  | ||||||||||  |||||| |||||    
T  30371107 taacaaaagataaaataaactcaaattgttttcatataagctataagttgttttcataagacattttggagagc 30371180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 132 - 185
Target Start/End: Original strand, 34952184 - 34952237
Alignment:
Q  132 taaaataaagttaaattgttttcatataagctgtaaactattttcataagctat 185  Q
    |||||||||||||||||||||||  |||||||||||  | ||||||||||||||    
T  34952184 taaaataaagttaaattgttttcgaataagctgtaagttgttttcataagctat 34952237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 130 - 186
Target Start/End: Complemental strand, 10586475 - 10586419
Alignment:
Q  130 gataaaataaagttaaattgttttcatataagctgtaaactattttcataagctatt 186  Q
    ||||||||||||| ||||||||||||||| | || ||| | ||||||||||||||||    
T  10586475 gataaaataaagtaaaattgttttcatatgaactataagccattttcataagctatt 10586419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 189
Target Start/End: Complemental strand, 39976321 - 39976257
Alignment:
Q  125 caaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagctattttg 189  Q
    |||| |||||||||||||| | ||||||   |||||||| || ||||||||||||||||||||||    
T  39976321 caaaagataaaataaagttgatttgtttctgtataagctatacactattttcataagctattttg 39976257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 104 - 236
Target Start/End: Complemental strand, 46252811 - 46252679
Alignment:
Q  104 atgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagctattttgaagagctcagaaaa 203  Q
    ||||||| | ||||| | ||||||| |||||||||||||||||||  |||   ||||||| |||| |||   |||||||||| ||| |||||| |  |||    
T  46252811 atgtataggctatttttataacaaaagataaaataaagttaaatttcttttgcataagctttaaagtatccacataagctatcttggagagcttatgaaa 46252712  T
Q  204 atagcgtgaaaacaagtcataaacatgtcataa 236  Q
    ||| | ||||||||| | || ||||||||||||    
T  46252711 ataacctgaaaacaacttatgaacatgtcataa 46252679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 163
Target Start/End: Complemental strand, 46499996 - 46499924
Alignment:
Q  91 catataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagct 163  Q
    |||||||| |||||| |||| | ||||||| ||| ||| ||||||||||||| |||||||||| || ||||||    
T  46499996 catataagtgcttatctataagctatttctataagaaaagataaaataaagtcaaattgtttttatttaagct 46499924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 101 - 157
Target Start/End: Original strand, 50319230 - 50319286
Alignment:
Q  101 cttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcata 157  Q
    |||||||||| | ||||||| ||||||| ||||||||||||| || |||||||||||    
T  50319230 cttatgtataagctatttctataacaaaagataaaataaagtcaagttgttttcata 50319286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 102 - 185
Target Start/End: Complemental strand, 4256173 - 4256091
Alignment:
Q  102 ttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagctat 185  Q
    ||||||||| | |||||||  |||||| |||| |||||||||||||| ||||| |||||||| | |||||| || |||||||||    
T  4256173 ttatgtataagctatttctacaacaaaagatacaataaagttaaattattttcgtataagctat-aactatgtttataagctat 4256091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 100 - 155
Target Start/End: Original strand, 4549803 - 4549858
Alignment:
Q  100 gcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttca 155  Q
    ||||||||| | | ||||||| ||||||| ||||||||||||||||||||| ||||    
T  4549803 gcttatgtacaagctatttctataacaaaagataaaataaagttaaattgtcttca 4549858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 94 - 157
Target Start/End: Original strand, 6976879 - 6976942
Alignment:
Q  94 ataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcata 157  Q
    |||| |||||||||||| | ||||||| ||||||| ||||| ||||||||||| | ||||||||    
T  6976879 ataatggcttatgtataagatatttctataacaaaagataagataaagttaaactattttcata 6976942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 94 - 181
Target Start/End: Complemental strand, 33527286 - 33527199
Alignment:
Q  94 ataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataag 181  Q
    ||||| ||||||| ||| | |||||||  |||||| ||||||||| ||| ||| ||||||||||||| || ||| || ||||||||||    
T  33527286 ataagcgcttatgaataagctatttctaaaacaaaagataaaatacagtcaaactgttttcatataatctataagctgttttcataag 33527199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 100 - 163
Target Start/End: Complemental strand, 34619511 - 34619448
Alignment:
Q  100 gcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagct 163  Q
    ||||||||||| |  |||||| ||||||| |||||||||| |||||||||||||  ||||||||    
T  34619511 gcttatgtataagccatttctataacaaaagataaaataaggttaaattgtttttgtataagct 34619448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 94 - 181
Target Start/End: Original strand, 36070181 - 36070268
Alignment:
Q  94 ataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataag 181  Q
    ||||| ||||||||||  | ||||| | ||||||| ||||||||||||||||||||| |||  ||||||| |||  | ||||||||||    
T  36070181 ataagcgcttatgtatgggctatttttataacaaaagataaaataaagttaaattgtcttcggataagctataagttgttttcataag 36070268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 102 - 161
Target Start/End: Complemental strand, 36151636 - 36151577
Alignment:
Q  102 ttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataag 161  Q
    ||||||||| | ||||||  ||||||| ||||||||||||| ||||||||||| ||||||    
T  36151636 ttatgtataagctatttcaataacaaaagataaaataaagtcaaattgttttcgtataag 36151577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 103 - 206
Target Start/End: Complemental strand, 37842485 - 37842382
Alignment:
Q  103 tatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagctattttgaagagctcagaaa 202  Q
    |||||||| | ||||||| || |||| ||| ||||||||||||| ||| |||  ||||||| |||  | |||||||||||||| ||||||| || | |||    
T  37842485 tatgtataagctatttctatagcaaaagatgaaataaagttaaactgtgttcgaataagctataagttgttttcataagctatcttgaagaacttataaa 37842386  T
Q  203 aata 206  Q
    ||||    
T  37842385 aata 37842382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 104 - 163
Target Start/End: Complemental strand, 45990187 - 45990128
Alignment:
Q  104 atgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagct 163  Q
    ||||||| | ||||| | || |||| ||||||||||||| ||||||||||||||||||||    
T  45990187 atgtatatgctatttttatatcaaaagataaaataaagtaaaattgttttcatataagct 45990128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 90 - 196
Target Start/End: Original strand, 48282060 - 48282167
Alignment:
Q  90 tcatataagggcttatgtatacgttatttctctaaca-aacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagctatttt 188  Q
    ||||||||| ||||||||| | | ||||||| ||| | || ||||||||||||| ||| | ||||| | |||| | |||||| |||||||||| ||| ||    
T  48282060 tcatataagtgcttatgtaaaagctatttctataaaagaaagataaaataaagtcaaactattttcctttaagttttaaactgttttcataagttatgtt 48282159  T
Q  189 gaagagct 196  Q
    ||||||||    
T  48282160 gaagagct 48282167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 90 - 157
Target Start/End: Complemental strand, 48748725 - 48748659
Alignment:
Q  90 tcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcata 157  Q
    ||||||| | ||||||||||| | ||||||| || |||| ||| ||||||||||||||||||||||||    
T  48748725 tcatatatgtgcttatgtataagctatttctata-caaaagatgaaataaagttaaattgttttcata 48748659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 90 - 164
Target Start/End: Original strand, 870972 - 871046
Alignment:
Q  90 tcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctg 164  Q
    ||||||||| |||||||||||   ||||| | ||||||| |||||||| |||| || || |||||||||||||||    
T  870972 tcatataagtgcttatgtataaactatttttataacaaaagataaaattaagtcaattttttttcatataagctg 871046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 115 - 165
Target Start/End: Complemental strand, 1879145 - 1879095
Alignment:
Q  115 atttctctaacaaacgataaaataaagttaaattgttttcatataagctgt 165  Q
    |||||| ||||| | ||||||||||||| ||| ||||||||||||||||||    
T  1879145 atttctataacagaagataaaataaagtcaaaatgttttcatataagctgt 1879095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 122 - 185
Target Start/End: Complemental strand, 14630079 - 14630014
Alignment:
Q  122 taacaaacgataaaataaagttaaattgttttcatata--agctgtaaactattttcataagctat 185  Q
    ||||||| ||||||||||||||| | ||||| ||||||  |||| ||| |||||||||||||||||    
T  14630079 taacaaaagataaaataaagttacactgtttacatatataagctataagctattttcataagctat 14630014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 163
Target Start/End: Original strand, 15799618 - 15799704
Alignment:
Q  77 gcataaacacttgtcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagct 163  Q
    |||||||||||| ||| ||||  ||||||||||| | | ||||| |||||||  |  ||||||||| ||| ||||||||||||||||    
T  15799618 gcataaacacttatcaaataattgcttatgtatatgatgtttctttaacaaaaaaagaaataaagtcaaactgttttcatataagct 15799704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 72 - 206
Target Start/End: Complemental strand, 18434639 - 18434505
Alignment:
Q  72 ttatagcataaacacttgtcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaacta 171  Q
    |||||||| || | ||||||||||||| |||| |||||    ||||||  ||||||| ||||||||||||| ||| || | ||||||||||| ||  |||    
T  18434639 ttatagcacaagcgcttgtcatataagtgcttctgtattacctatttccataacaaaagataaaataaagtcaaactgctctcatataagctatatgcta 18434540  T
Q  172 ttttcataagctattttgaagagctcagaaaaata 206  Q
    |||||| ||| |||  || |||||| | |||||||    
T  18434539 ttttcacaagttatcctggagagcttacaaaaata 18434505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 57 - 159
Target Start/End: Original strand, 23895230 - 23895332
Alignment:
Q  57 aacttcatttagtacttatagcataaacacttgtcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcat 156  Q
    ||||| ||| || ||||| ||||||| | ||| |||||||||   ||||||||| | ||||||| ||||||| ||||||||||| | ||| |||| ||||    
T  23895230 aacttaattaagcacttaaagcataagcccttatcatataagttattatgtataagctatttctataacaaaagataaaataaattcaaactgttctcat 23895329  T
Q  157 ata 159  Q
    |||    
T  23895330 ata 23895332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 122 - 184
Target Start/End: Complemental strand, 28467418 - 28467356
Alignment:
Q  122 taacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagcta 184  Q
    ||||||| ||||||||||||| ||||| ||||||||||||||  ||  | |||||||||||||    
T  28467418 taacaaaagataaaataaagtcaaattattttcatataagctacaagttgttttcataagcta 28467356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 70 - 180
Target Start/End: Complemental strand, 30259650 - 30259540
Alignment:
Q  70 acttatagcataaacacttgtcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaac 169  Q
    ||||||| |||| |||||| ||||| ||| ||||||| | | | ||||||| |||||||  |||||||||||| ||| || ||| ||||||||| ||| |    
T  30259650 acttataacatacacacttatcatagaagtgcttatgcacaagctatttctataacaaaatataaaataaagtcaaactgctttgatataagctataagc 30259551  T
Q  170 tattttcataa 180  Q
    | ||| |||||    
T  30259550 tgtttgcataa 30259540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 114 - 184
Target Start/End: Complemental strand, 33723501 - 33723431
Alignment:
Q  114 tatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagcta 184  Q
    ||||||| ||| || | |||| ||||||| ||||||||||||||||| || | |||| |||||||||||||    
T  33723501 tatttctataagaatcaataacataaagtcaaattgttttcatataaactatgaactgttttcataagcta 33723431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 114 - 193
Target Start/End: Complemental strand, 38867952 - 38867871
Alignment:
Q  114 tatttctctaacaaacgataaaataaagttaaattgttttca--tataagctgtaaactattttcataagctattttgaaga 193  Q
    ||||||| || |||| ||| ||||||||| ||| ||||||||  |||||||| |||||| |||||||||| ||| |||||||    
T  38867952 tatttctataccaaaagattaaataaagtcaaaatgttttcatatataagctttaaactgttttcataagttatcttgaaga 38867871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 101 - 238
Target Start/End: Complemental strand, 4700198 - 4700061
Alignment:
Q  101 cttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagctattttgaagagctcaga 200  Q
    |||||||| | | ||||||| ||||||| |||||||||||||||  |  ||| | |||||||| |||||| |||| |||| ||||  || |||||| |      
T  4700198 cttatgtacaagctatttctataacaaaagataaaataaagttacttcatttccgtataagctataaactgtttttataaactatcctggagagcttatg 4700099  T
Q  201 aaaatagcgtgaaaacaagtcataaacatgtcataaat 238  Q
    ||||||   ||||||||| || ||||||||||| ||||    
T  4700098 aaaataagctgaaaacaactcctaaacatgtcaaaaat 4700061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 163
Target Start/End: Original strand, 6074425 - 6074474
Alignment:
Q  114 tatttctctaacaaacgataaaataaagttaaattgttttcatataagct 163  Q
    ||||||| ||||||| ||| | ||||||||||| ||||||||||||||||    
T  6074425 tatttctataacaaaagatgatataaagttaaactgttttcatataagct 6074474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 100 - 165
Target Start/End: Original strand, 7028229 - 7028294
Alignment:
Q  100 gcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgt 165  Q
    |||||||||||   ||||||| || |||| |||||||||||||||| |||||||  ||||||||||    
T  7028229 gcttatgtataaactatttctatagcaaaagataaaataaagttaagttgtttttgtataagctgt 7028294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 185
Target Start/End: Complemental strand, 7218175 - 7218122
Alignment:
Q  132 taaaataaagttaaattgttttcatataagctgtaaactattttcataagctat 185  Q
    ||||||||||| |||||||||||||||||||| |||  | ||||||||| ||||    
T  7218175 taaaataaagtcaaattgttttcatataagctataagttgttttcataacctat 7218122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 135
Target Start/End: Original strand, 13037787 - 13037836
Alignment:
Q  86 cttgtcatataagggcttatgtatacgttatttctctaacaaacgataaa 135  Q
    ||||||||||||| ||||||||||| | ||||||| ||||||| ||||||    
T  13037787 cttgtcatataagtgcttatgtataagctatttctataacaaaagataaa 13037836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 112 - 153
Target Start/End: Original strand, 13809947 - 13809988
Alignment:
Q  112 gttatttctctaacaaacgataaaataaagttaaattgtttt 153  Q
    ||||||||| || |||| ||||||||||||||||||||||||    
T  13809947 gttatttctttagcaaaagataaaataaagttaaattgtttt 13809988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 191
Target Start/End: Complemental strand, 19462865 - 19462808
Alignment:
Q  134 aaataaagttaaattgttttcatataagctgtaaactattttcataagctattttgaa 191  Q
    ||||||||| |||  |||||||||||| ||||||| | ||||||||||||||| ||||    
T  19462865 aaataaagtcaaacagttttcatataaactgtaaattgttttcataagctattctgaa 19462808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 183
Target Start/End: Complemental strand, 24915154 - 24915101
Alignment:
Q  130 gataaaataaagttaaattgttttcatataagctgtaaactattttcataagct 183  Q
    ||||||||||||||||||||||||  |||| ||| ||| || ||||||||||||    
T  24915154 gataaaataaagttaaattgtttttgtatatgctataagctgttttcataagct 24915101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 101 - 158
Target Start/End: Complemental strand, 29929753 - 29929696
Alignment:
Q  101 cttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatat 158  Q
    ||||||||||| ||||||||  ||||||  ||||||| |||||||| |||||||||||    
T  29929753 cttatgtatactttatttcttcaacaaaacataaaatgaagttaaactgttttcatat 29929696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 161
Target Start/End: Complemental strand, 30815752 - 30815707
Alignment:
Q  116 tttctctaacaaacgataaaataaagttaaattgttttcatataag 161  Q
    ||||| ||||||| ||||||||||||||||| | ||||||||||||    
T  30815752 tttctataacaaaagataaaataaagttaaactattttcatataag 30815707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 128
Target Start/End: Original strand, 33527339 - 33527388
Alignment:
Q  79 ataaacacttgtcatataagggcttatgtatacgttatttctctaacaaa 128  Q
    ||||||||||||  |||||| ||||||||||| ||||||||| |||||||    
T  33527339 ataaacacttgtattataagcgcttatgtataagttatttctttaacaaa 33527388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 103 - 156
Target Start/End: Complemental strand, 40358016 - 40357963
Alignment:
Q  103 tatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcat 156  Q
    |||||||| | ||||||| ||||||  ||||||||||||| |||||||||||||    
T  40358016 tatgtataagctatttctataacaatggataaaataaagtcaaattgttttcat 40357963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 180
Target Start/End: Complemental strand, 46980294 - 46980182
Alignment:
Q  67 agtacttatagcataaacacttgtcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgta 166  Q
    |||||||||||||||  || || ||||||||| || |||| ||| ||| ||| | || |||| ||||||||||||  ||| |||||||||||||| | ||    
T  46980294 agtacttatagcatac-catttatcatataagtgcatatgcataagttgtttttatatcaaaagataaaataaagacaaactgttttcatataagttata 46980196  T
Q  167 aactattttcataa 180  Q
    || | |||||||||    
T  46980195 aattgttttcataa 46980182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 164
Target Start/End: Complemental strand, 47498946 - 47498905
Alignment:
Q  123 aacaaacgataaaataaagttaaattgttttcatataagctg 164  Q
    |||||| ||||||||||||||||||| ||||| |||||||||    
T  47498946 aacaaaagataaaataaagttaaattattttcgtataagctg 47498905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 130 - 198
Target Start/End: Complemental strand, 1565638 - 1565570
Alignment:
Q  130 gataaaataaagttaaattgttttcatataagctgtaaactattttcataagctattttgaagagctca 198  Q
    |||||||| |||||||||||||||  |||||  ||||| || ||||| ||| |||||||| ||||||||    
T  1565638 gataaaatgaagttaaattgtttttgtataaagtgtaagctgttttcttaatctattttggagagctca 1565570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 112 - 236
Target Start/End: Complemental strand, 10199529 - 10199405
Alignment:
Q  112 gttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagctattttgaagagctcagaaaaatagcgtg 211  Q
    ||||||||| ||||  | ||||||||||||| ||| | ||||| ||||| |  ||| || |||||||||||||||||  |||||| |  ||||||   ||    
T  10199529 gttatttctataacccaagataaaataaagtcaaactattttcgtataatcgataagcttttttcataagctattttagagagcttatgaaaataagctg 10199430  T
Q  212 aaaacaagtcataaacatgtcataa 236  Q
    ||||||| | || ||||||||||||    
T  10199429 aaaacaacttatgaacatgtcataa 10199405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 72 - 185
Target Start/End: Complemental strand, 12519131 - 12519016
Alignment:
Q  72 ttatagcataaacacttgtcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttca--tataagctgtaaac 169  Q
    ||||||||||||||| | | |||||||  | ||||||||   || |||| ||||||   |||||||||||| ||||||||||||  |||||||| ||||     
T  12519131 ttatagcataaacacctattatataagcacctatgtataatctacttctataacaatgtataaaataaagtcaaattgttttcatgtataagctataaat 12519032  T
Q  170 tattttcataagctat 185  Q
      ||||||||||||||    
T  12519031 agttttcataagctat 12519016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 130 - 186
Target Start/End: Original strand, 15361680 - 15361736
Alignment:
Q  130 gataaaataaagttaaattgttttcatataagctgtaaactattttcataagctatt 186  Q
    |||||| |||||| ||||| |||||||||||||| ||| || |||||||||| ||||    
T  15361680 gataaagtaaagtcaaattattttcatataagctataagctgttttcataagatatt 15361736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 132 - 164
Target Start/End: Original strand, 15784305 - 15784337
Alignment:
Q  132 taaaataaagttaaattgttttcatataagctg 164  Q
    ||||||||||||||||||||||| |||||||||    
T  15784305 taaaataaagttaaattgttttcgtataagctg 15784337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 134 - 238
Target Start/End: Complemental strand, 18403295 - 18403191
Alignment:
Q  134 aaataaagttaaattgttttcatataagctgtaaactattttcataagctattttgaagagctcagaaaaatagcgtgaaaacaagtcataaacatgtca 233  Q
    ||||||||||||||||||  |  ||||||| ||  |||||||||| ||||||| || |||||| | |||||||   ||| ||||| | ||||||||||||    
T  18403295 aaataaagttaaattgttcgcgaataagctatatgctattttcatgagctattctggagagcttacaaaaataagttgagaacaatttataaacatgtca 18403196  T
Q  234 taaat 238  Q
     ||||    
T  18403195 caaat 18403191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 28788648 - 28788608
Alignment:
Q  123 aacaaacgataaaataaagttaaattgttttcatataagct 163  Q
    |||||| ||||||||||||| ||| ||||||||||||||||    
T  28788648 aacaaaggataaaataaagtcaaactgttttcatataagct 28788608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 100 - 180
Target Start/End: Complemental strand, 40304187 - 40304107
Alignment:
Q  100 gcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataa 180  Q
    ||||| ||||| | ||||| | ||||||| ||||||||||| | | |||||||||||||||| | ||| || |||||||||    
T  40304187 gcttaggtataagctatttatataacaaaagataaaataaaatcacattgttttcatataagttataagctgttttcataa 40304107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 112 - 172
Target Start/End: Complemental strand, 44936711 - 44936651
Alignment:
Q  112 gttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactat 172  Q
    ||||||||| ||||||| ||||| ||||||| ||| | |||||||||||||| ||| ||||    
T  44936711 gttatttctataacaaaagataagataaagtcaaactattttcatataagctataatctat 44936651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 73 - 161
Target Start/End: Original strand, 45107533 - 45107620
Alignment:
Q  73 tatagcataaacacttgtcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataag 161  Q
    |||||||||||||  | ||||||||| |||||| |||| | ||||||| ||| |||  |||||||||||| ||| | ||||||||||||    
T  45107533 tatagcataaacatctatcatataagtgcttatctataagctatttctataagaaa-aataaaataaagtcaaactattttcatataag 45107620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 113 - 185
Target Start/End: Complemental strand, 47002994 - 47002922
Alignment:
Q  113 ttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagctat 185  Q
    |||||||  ||| ||| |||||||||||||||||||||||| ||| ||| |  ||| | ||||||||||||||    
T  47002994 ttatttcgataataaaagataaaataaagttaaattgtttttatacaagttagaaattgttttcataagctat 47002922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 101 - 185
Target Start/End: Original strand, 49888705 - 49888789
Alignment:
Q  101 cttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagctat 185  Q
    |||||||||| | ||||||| |   ||| |||||||||||||| |||||||||| |||||||| | |  | ||||||||||||||    
T  49888705 cttatgtataagctatttctttggaaaaagataaaataaagtttaattgttttcgtataagctattagttgttttcataagctat 49888789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 58; Significance: 3e-24; HSPs: 67)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 87 - 196
Target Start/End: Original strand, 3673731 - 3673840
Alignment:
Q  87 ttgtcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagctatt 186  Q
    |||||||||||| ||||||||||  ||||||||| |||||||  ||||||||||||||||||||||||||||||| | |||  | ||||||| ||||||     
T  3673731 ttgtcatataagtgcttatgtattagttatttctataacaaaatataaaataaagttaaattgttttcatataagttataagtttttttcattagctatc 3673830  T
Q  187 ttgaagagct 196  Q
    ||||||||||    
T  3673831 ttgaagagct 3673840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 90 - 185
Target Start/End: Complemental strand, 18962181 - 18962086
Alignment:
Q  90 tcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagctat 185  Q
    |||| |||| ||||||||||  | ||||| | ||||||| ||||||||||||||||| |||||||||||||||| |||||||||||||||||||||    
T  18962181 tcatgtaagtgcttatgtattagctatttttataacaaaagataaaataaagttaaactgttttcatataagctataaactattttcataagctat 18962086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 71 - 185
Target Start/End: Original strand, 11513809 - 11513920
Alignment:
Q  71 cttatagcataaacacttgtcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaact 170  Q
    |||||| ||||| ||||| ||||||||||| ||||||||| |||||| |   |||||| ||||||||||||| |||||||||||||||||||| |||  |    
T  11513809 cttataacataagcacttatcatataagggtttatgtataagttattac---aacaaaagataaaataaagtcaaattgttttcatataagctataagtt 11513905  T
Q  171 attttcataagctat 185  Q
     ||||||||||||||    
T  11513906 gttttcataagctat 11513920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 124 - 185
Target Start/End: Original strand, 8017395 - 8017456
Alignment:
Q  124 acaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagctat 185  Q
    ||||| ||||||| ||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  8017395 acaaaggataaaacaaagttaaattattttcatataagctgtaaactgttttcataagctat 8017456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 94 - 185
Target Start/End: Original strand, 10143103 - 10143194
Alignment:
Q  94 ataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagctat 185  Q
    ||||| ||||||||||| ||||||||| ||||||| |||||||| |||| ||| |||||| ||||||||| |||  | ||||||||||||||    
T  10143103 ataagtgcttatgtataagttatttctataacaaaagataaaattaagtcaaactgtttttatataagctataagtttttttcataagctat 10143194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 82 - 177
Target Start/End: Complemental strand, 11344435 - 11344340
Alignment:
Q  82 aacacttgtcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttca 177  Q
    ||||||||| ||||||| ||||||| ||| | ||||||| ||||||| ||||||| ||||| |||||||||||||| ||||| |||| | ||||||    
T  11344435 aacacttgttatataagtgcttatgcataagatatttctataacaaaagataaaagaaagtcaaattgttttcatacaagctataaattgttttca 11344340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 90 - 165
Target Start/End: Complemental strand, 33267659 - 33267584
Alignment:
Q  90 tcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgt 165  Q
    ||||||||| |||||||||||   ||||||| ||||||||  ||||||||||||||| ||||||||||||||||||    
T  33267659 tcatataagtgcttatgtataatctatttctataacaaacagtaaaataaagttaaactgttttcatataagctgt 33267584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 95 - 181
Target Start/End: Original strand, 2416245 - 2416331
Alignment:
Q  95 taagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataag 181  Q
    |||| ||||||||||| ||||||||| || |||| |||||||| ||||||||||||||| ||||||||| ||| || |||| |||||    
T  2416245 taagtgcttatgtataagttatttctgtagcaaaagataaaatgaagttaaattgttttgatataagctataagctgtttttataag 2416331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 70 - 163
Target Start/End: Complemental strand, 11393818 - 11393725
Alignment:
Q  70 acttatagcataaacacttgtcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagct 163  Q
    |||||||||||||||| || |||| |||| ||||||||||| | ||||||| || |||| |||| ||||||| ||||| || ||||||||||||    
T  11393818 acttatagcataaacatttatcatttaagtgcttatgtataagctatttctataccaaaagatacaataaagctaaatcgtcttcatataagct 11393725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 70 - 163
Target Start/End: Complemental strand, 11410479 - 11410386
Alignment:
Q  70 acttatagcataaacacttgtcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagct 163  Q
    |||||||||||||||| || |||| |||| ||||||||||| | ||||||| || |||| |||| ||||||| ||||| || ||||||||||||    
T  11410479 acttatagcataaacatttatcatttaagtgcttatgtataagctatttctataccaaaagatacaataaagctaaatcgtcttcatataagct 11410386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 84 - 185
Target Start/End: Complemental strand, 17952850 - 17952749
Alignment:
Q  84 cacttgtcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagct 183  Q
    ||||| ||||||||| |||||| |||| | ||||||| ||||||| ||||||||||||| ||| | ||||||||||||||  ||  | ||||||||||||    
T  17952850 cacttatcatataagagcttatatataagctatttctataacaaaagataaaataaagtcaaactattttcatataagctacaagatgttttcataagct 17952751  T
Q  184 at 185  Q
    ||    
T  17952750 at 17952749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 71 - 196
Target Start/End: Complemental strand, 42817538 - 42817413
Alignment:
Q  71 cttatagcataaacacttgtcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaact 170  Q
    |||||||||||| |  || ||||||||| | | || |||| ||||||||| || |||| |||||||| |||| ||  ||||||||||||||   ||||||    
T  42817538 cttatagcataagcgtttatcatataagtgttgatttatatgttatttctataccaaaagataaaatgaagtcaagctgttttcatataagtaataaact 42817439  T
Q  171 attttcataagctattttgaagagct 196  Q
     ||||||||||||||| |||||||||    
T  42817438 gttttcataagctattctgaagagct 42817413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 100 - 196
Target Start/End: Original strand, 15377702 - 15377798
Alignment:
Q  100 gcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagctattttgaagagct 196  Q
    |||||| |||| | || |||| || |||| ||||||||||||||| |||||||||||||||| | ||| || ||||||||||||||| ||| |||||    
T  15377702 gcttatttataagctacttctataccaaaggataaaataaagttagattgttttcatataagttataagctgttttcataagctattctgaggagct 15377798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 57 - 160
Target Start/End: Complemental strand, 13630457 - 13630354
Alignment:
Q  57 aacttcatttagtacttatagcataaacacttgtcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcat 156  Q
    ||||| ||| ||| |||||| | || ||| || ||||||| | ||||||||||| |||||||||||| |||| ||||| ||||||| ||| |||||||||    
T  13630457 aacttaattaagtgcttataacgtacacatttttcatataggtgcttatgtataagttatttctctatcaaaagataagataaagtcaaactgttttcat 13630358  T
Q  157 ataa 160  Q
    ||||    
T  13630357 ataa 13630354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 134 - 185
Target Start/End: Original strand, 18066099 - 18066150
Alignment:
Q  134 aaataaagttaaattgttttcatataagctgtaaactattttcataagctat 185  Q
    |||||||||||||||||||||||||||||| ||| || ||||||||||||||    
T  18066099 aaataaagttaaattgttttcatataagctataagctgttttcataagctat 18066150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 72 - 163
Target Start/End: Complemental strand, 28803667 - 28803576
Alignment:
Q  72 ttatagcataaacacttgtcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagct 163  Q
    |||| |||||||  ||| ||||||||| |||||| |||| ||||||||  ||||||| ||||||||||||| ||| || |||||||||||||    
T  28803667 ttatggcataaatgcttatcatataagtgcttatatataagttatttcgataacaaaagataaaataaagtcaaactgatttcatataagct 28803576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 123 - 185
Target Start/End: Original strand, 9556199 - 9556261
Alignment:
Q  123 aacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagctat 185  Q
    |||||||||||||||||||| ||  |||||||||| ||||| |||||| ||||||||||||||    
T  9556199 aacaaacgataaaataaagtcaacgtgttttcatacaagctataaactgttttcataagctat 9556261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 72 - 165
Target Start/End: Original strand, 34339032 - 34339125
Alignment:
Q  72 ttatagcataaacacttgtcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgt 165  Q
    ||||||||||||||||| ||||||||| |||||||||||   | ||||| || | || ||||||||||||| | | ||||||| ||||||||||    
T  34339032 ttatagcataaacacttatcatataagtgcttatgtataaactttttctatagctaaagataaaataaagtcagactgttttcgtataagctgt 34339125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 77 - 181
Target Start/End: Complemental strand, 35755658 - 35755554
Alignment:
Q  77 gcataaacacttgtcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttc 176  Q
    ||||||||||||||| |||||| | ||||||||| | ||||||| |||  ||  | |||||||||| ||||||||||||| |||||| |||  | |||||    
T  35755658 gcataaacacttgtcgtataagtgtttatgtataagctatttctataatcaaatagaaaataaagtcaaattgttttcatgtaagctataagttgttttc 35755559  T
Q  177 ataag 181  Q
    |||||    
T  35755558 ataag 35755554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 105 - 181
Target Start/End: Original strand, 39567845 - 39567921
Alignment:
Q  105 tgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataag 181  Q
    |||||| | ||||||| ||||||| |||||||||||||||||||||||  | ||||||| ||| || ||||||||||    
T  39567845 tgtataagatatttctataacaaaagataaaataaagttaaattgtttcaagataagctataagctgttttcataag 39567921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 73 - 165
Target Start/End: Original strand, 44600448 - 44600543
Alignment:
Q  73 tatagcataaacacttgtcat-ataagggcttatgtatacgttatttctctaac--aaacgataaaataaagttaaattgttttcatataagctgt 165  Q
    ||||||||| |||||| || | ||||| ||||||||||| | ||||||| || |  ||| |||||||||||||||||| |||||||||||||||||    
T  44600448 tatagcatagacacttatcgtgataagtgcttatgtataagctatttctatagccaaaaagataaaataaagttaaatagttttcatataagctgt 44600543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 123 - 194
Target Start/End: Complemental strand, 1056462 - 1056392
Alignment:
Q  123 aacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagctattttgaagag 194  Q
    |||||| |||||||||||   ||||| ||||||||||| |||||| ||||||||||||||||| ||||||||    
T  1056462 aacaaaagataaaataaatacaaatt-ttttcatataacctgtaagctattttcataagctatcttgaagag 1056392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 94 - 153
Target Start/End: Original strand, 3611157 - 3611216
Alignment:
Q  94 ataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgtttt 153  Q
    ||||| ||||||||||| ||||||||| || |||| | ||||||||||||||||||||||    
T  3611157 ataagtgcttatgtataagttatttctatagcaaaaggtaaaataaagttaaattgtttt 3611216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 130 - 185
Target Start/End: Complemental strand, 12464576 - 12464521
Alignment:
Q  130 gataaaataaagttaaattgttttcatataagctgtaaactattttcataagctat 185  Q
    ||||||||||||||||||||||||  |||| ||| ||| |||||||||||||||||    
T  12464576 gataaaataaagttaaattgtttttgtatatgctataagctattttcataagctat 12464521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 114 - 196
Target Start/End: Complemental strand, 656896 - 656814
Alignment:
Q  114 tatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagctattttgaagagct 196  Q
    ||||||| ||||||| ||||||||| | | ||||||||||| ||||||||||||  |  ||||||||||||| ||| ||||||    
T  656896 tatttctataacaaaagataaaatataatcaaattgttttcgtataagctgtaagttgatttcataagctatcttgcagagct 656814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 143 - 193
Target Start/End: Original strand, 680483 - 680533
Alignment:
Q  143 taaattgttttcatataagctgtaaactattttcataagctattttgaaga 193  Q
    |||||||||||| |||||||| ||| ||||||||||||||||| |||||||    
T  680483 taaattgttttcgtataagctataagctattttcataagctatcttgaaga 680533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 72 - 161
Target Start/End: Original strand, 5133683 - 5133770
Alignment:
Q  72 ttatagcataaacacttgtcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataag 161  Q
    ||||||||||| ||||| ||||||  |  |||||||||| | ||||||| ||||||| |||||||||||| |||| |||||| |||||||    
T  5133683 ttatagcataagcacttatcatatttg--cttatgtataagctatttctataacaaaagataaaataaagataaactgtttttatataag 5133770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 123 - 181
Target Start/End: Original strand, 34339866 - 34339924
Alignment:
Q  123 aacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataag 181  Q
    |||||| ||||||||||||| ||||| ||||| |||||| | |||||||||||||||||    
T  34339866 aacaaaagataaaataaagtcaaattattttcgtataaggtataaactattttcataag 34339924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 116 - 182
Target Start/End: Original strand, 42592292 - 42592358
Alignment:
Q  116 tttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagc 182  Q
    ||||| || |||| |||||||| ||||||| ||||||||||||||||| ||| || |||||||||||    
T  42592292 tttctataccaaaagataaaattaagttaacttgttttcatataagctataagctgttttcataagc 42592358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 95 - 185
Target Start/End: Original strand, 43199346 - 43199436
Alignment:
Q  95 taagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagctat 185  Q
    |||| |||| |||||| |||||||||  |||||| ||||||||||||||||||| | ||| |||||||| |||  | ||||||||| ||||    
T  43199346 taagcgcttctgtataagttatttctacaacaaaagataaaataaagttaaattatcttcgtataagctataagttgttttcataaactat 43199436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 68 - 181
Target Start/End: Complemental strand, 1493678 - 1493565
Alignment:
Q  68 gtacttatagcataaacacttgtcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaa 167  Q
    |||||||| |||||||| ||| ||||||||  |||||| ||||   | ||||| ||||||  |||||||||||||  | ||||||||||||||||| ||     
T  1493678 gtacttatcgcataaactcttatcatataattgcttatttataaactctttctataacaatagataaaataaagtctagttgttttcatataagctatat 1493579  T
Q  168 actattttcataag 181  Q
     || ||||||||||    
T  1493578 gctgttttcataag 1493565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 84 - 196
Target Start/End: Original strand, 13864571 - 13864681
Alignment:
Q  84 cacttgtcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagct 183  Q
    |||| |||||||||| | ||||||||| | ||||||| ||||||| | |||||||||||  |  | |||| ||||||||| ||  |||||||||||| ||    
T  13864571 cactcgtcatataagtgtttatgtataagctatttctataacaaaaggtaaaataaagtcga--tttttttatataagctatatgctattttcataaact 13864668  T
Q  184 attttgaagagct 196  Q
    ||||||| |||||    
T  13864669 attttgacgagct 13864681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 120 - 165
Target Start/End: Original strand, 16451082 - 16451127
Alignment:
Q  120 tctaacaaacgataaaataaagttaaattgttttcatataagctgt 165  Q
    |||| |||| |||||||| |||||||||||||||||||||||||||    
T  16451082 tctagcaaaagataaaatgaagttaaattgttttcatataagctgt 16451127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 144 - 193
Target Start/End: Original strand, 25800810 - 25800859
Alignment:
Q  144 aaattgttttcatataagctgtaaactattttcataagctattttgaaga 193  Q
    |||||||||||||||||||| ||| || |||||||||||||| |||||||    
T  25800810 aaattgttttcatataagctataagctgttttcataagctatcttgaaga 25800859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 84 - 161
Target Start/End: Original strand, 37053515 - 37053592
Alignment:
Q  84 cacttgtcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataag 161  Q
    ||||| ||||||||| |||||||||||   ||||||| ||||| |  |||||||||||| ||| ||||||||||||||    
T  37053515 cacttatcatataagtgcttatgtatagactatttctataacagaaaataaaataaagtcaaactgttttcatataag 37053592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 116 - 185
Target Start/End: Complemental strand, 41875770 - 41875701
Alignment:
Q  116 tttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagctat 185  Q
    ||||| |||| || |||||||| | ||||| |||||||| |||||||||||| || ||||||||||||||    
T  41875770 tttctttaaccaaagataaaatgatgttaagttgttttcgtataagctgtaagctgttttcataagctat 41875701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 179
Target Start/End: Complemental strand, 3235563 - 3235438
Alignment:
Q  54 aaaaacttcatttagtacttatagcataaacacttgtc--atataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgtt 151  Q
    |||||||| ||| || ||||||||||||||||||| ||  ||||||| ||||||||||  | ||||| | ||||||| || |||||||||| ||| || |    
T  3235563 aaaaacttaattgagcacttatagcataaacacttatcatatataagtgcttatgtattagctatttttataacaaatga-aaaataaagtcaaactg-t 3235466  T
Q  152 ttcatataagctgtaaactattttcata 179  Q
    ||||||||| || ||| || ||||||||    
T  3235465 ttcatataaactataagctgttttcata 3235438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 158
Target Start/End: Original strand, 35809860 - 35809927
Alignment:
Q  90 tcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatat 158  Q
    ||||||||| ||||||||||| ||||||||  | ||||| ||||||||||| | |||||||||||||||    
T  35809860 tcatataagtgcttatgtataagttatttccatgacaaa-gataaaataaaatcaaattgttttcatat 35809927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 94 - 181
Target Start/End: Original strand, 1646945 - 1647032
Alignment:
Q  94 ataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataag 181  Q
    ||||| ||||||||| | | ||||| | || ||||||||||||| ||||| |||||||||  |||||||| ||| || ||||||||||    
T  1646945 ataagtgcttatgtacaagctatttgtatagcaaacgataaaattaagttcaattgtttttttataagctataagctgttttcataag 1647032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 71 - 157
Target Start/End: Complemental strand, 32098473 - 32098384
Alignment:
Q  71 cttatagcataaacacttgtcatata---agggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcata 157  Q
    ||||||||||||||| || |||||||   |  |||||| |||| | ||||||| ||||||| ||||||||||||| ||| ||||||||||    
T  32098473 cttatagcataaacagttatcatatactaaatgcttatatataagctatttctataacaaaagataaaataaagtcaaagtgttttcata 32098384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 131 - 178
Target Start/End: Original strand, 33944573 - 33944620
Alignment:
Q  131 ataaaataaagttaaattgttttcatataagctgtaaactattttcat 178  Q
    |||||||||||| |||||||||||||||||||| |||| | |||||||    
T  33944573 ataaaataaagtcaaattgttttcatataagctataaattgttttcat 33944620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 94 - 185
Target Start/End: Complemental strand, 34055040 - 34054949
Alignment:
Q  94 ataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagctat 185  Q
    ||||| ||||||||||| | ||||||| ||||||| ||||||||||||  ||| ||||| |||||| | | |||  | ||||||||||||||    
T  34055040 ataagtgcttatgtataggctatttctataacaaaagataaaataaaggcaaactgtttacatatatgatataaggtgttttcataagctat 34054949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 104 - 159
Target Start/End: Complemental strand, 40837557 - 40837502
Alignment:
Q  104 atgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatata 159  Q
    ||||||| | ||||||| ||||||| |||||| |||||| ||||||||||||||||    
T  40837557 atgtataagctatttctataacaaaagataaattaaagtcaaattgttttcatata 40837502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 102 - 160
Target Start/End: Complemental strand, 3423899 - 3423841
Alignment:
Q  102 ttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataa 160  Q
    ||||||||| ||||||| | || |||| ||||||||||||| ||||| |||||||||||    
T  3423899 ttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 3423841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 70 - 160
Target Start/End: Original strand, 4550684 - 4550774
Alignment:
Q  70 acttatagcataaacacttgtcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataa 160  Q
    ||||||||||||| | ||| ||| ||||| ||||||||||| ||| ||||  ||| ||| |||||||||| || ||  |||||||||||||    
T  4550684 acttatagcataatctcttatcacataagtgcttatgtataagttgtttccataataaaagataaaataacgtcaagctgttttcatataa 4550774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 130 - 196
Target Start/End: Original strand, 9395097 - 9395163
Alignment:
Q  130 gataaaataaagttaaattgttttcatataagctgtaaactattttcataagctattttgaagagct 196  Q
    |||||||||||| |||||||||||||||||| || ||| || ||||||| || |||| || ||||||    
T  9395097 gataaaataaagctaaattgttttcatataatctataagctgttttcattagttattctgtagagct 9395163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 123 - 185
Target Start/End: Complemental strand, 22681295 - 22681233
Alignment:
Q  123 aacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagctat 185  Q
    |||||| ||||||| ||||  |||||||||||||||||||| ||| || ||||||||| ||||    
T  22681295 aacaaaagataaaacaaagccaaattgttttcatataagctataagctgttttcataatctat 22681233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 93 - 163
Target Start/End: Original strand, 28902007 - 28902077
Alignment:
Q  93 tataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagct 163  Q
    |||||| ||||||||||| | ||||| | ||||| | | ||||||||| ||||| ||||||||||||||||    
T  28902007 tataagtgcttatgtataagctatttttataacataagttaaaataaaattaaactgttttcatataagct 28902077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 94 - 144
Target Start/End: Complemental strand, 29629128 - 29629078
Alignment:
Q  94 ataagggcttatgtatacgttatttctctaacaaacgataaaataaagtta 144  Q
    ||||| ||||||||||| ||||||||| | ||||| |||||||||||||||    
T  29629128 ataagtgcttatgtatatgttatttctgtgacaaaagataaaataaagtta 29629078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 72 - 165
Target Start/End: Original strand, 43808485 - 43808578
Alignment:
Q  72 ttatagcataaacacttgtcatataagggcttatgtatacgttatttctc-taacaaacgataaaataaagttaaattgttttcatataagctgt 165  Q
    ||||||||||| | | | ||||||||| | ||||||||| | ||||| |  |||||||| |||||||||||||||| | ||||||||||||||||    
T  43808485 ttatagcataagcgcgtatcatataagtgtttatgtataagctattttttataacaaac-ataaaataaagttaaactattttcatataagctgt 43808578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 107 - 185
Target Start/End: Complemental strand, 44439486 - 44439408
Alignment:
Q  107 tatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagctat 185  Q
    |||| ||||||||  |||||||  |||||||||||||||| ||||||  |||||||| |||| | |||| |||||||||    
T  44439486 tataagttatttccataacaaaatataaaataaagttaaactgtttttgtataagctataaattgtttttataagctat 44439408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 112 - 165
Target Start/End: Original strand, 3458606 - 3458659
Alignment:
Q  112 gttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgt 165  Q
    ||||||| | ||||||| ||||||||||||| ||| | ||||||||||||||||    
T  3458606 gttatttttataacaaaagataaaataaagtcaaacttttttcatataagctgt 3458659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 185
Target Start/End: Complemental strand, 17221641 - 17221588
Alignment:
Q  132 taaaataaagttaaattgttttcatataagctgtaaactattttcataagctat 185  Q
    ||||||||||| |||||||| ||||||||||| | || | ||||||||||||||    
T  17221641 taaaataaagtcaaattgttctcatataagctattaagtgttttcataagctat 17221588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 94 - 163
Target Start/End: Original strand, 25609727 - 25609796
Alignment:
Q  94 ataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagct 163  Q
    ||||| ||||||||||| | ||||||| ||| ||| ||||||||||||| || || ||||| ||||||||    
T  25609727 ataagtgcttatgtataagctatttctataagaaaagataaaataaagtcaatttattttcgtataagct 25609796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 183
Target Start/End: Complemental strand, 28039435 - 28039382
Alignment:
Q  130 gataaaataaagttaaattgttttcatataagctgtaaactattttcataagct 183  Q
    |||||||||||||  |||||||||||||||| || ||| | |||||||||||||    
T  28039435 gataaaataaagtccaattgttttcatataaactataagcaattttcataagct 28039382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 185
Target Start/End: Original strand, 28933753 - 28933846
Alignment:
Q  92 atataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagctat 185  Q
    ||||||| ||| ||||||| | ||||| | ||||||| |||||||| || | ||||| ||||||| |||| | |||| | ||||||||||||||    
T  28933753 atataagtgctcatgtataagctatttatataacaaaagataaaatcaaatcaaattattttcatttaagttataaattgttttcataagctat 28933846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 163
Target Start/End: Original strand, 35459837 - 35459910
Alignment:
Q  90 tcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagct 163  Q
    ||||||||| | || |||||| | ||||| | || |||| ||||||||||||| ||||||||||| ||||||||    
T  35459837 tcatataagtgattttgtataagctatttgtataccaaaagataaaataaagtcaaattgttttcgtataagct 35459910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 162
Target Start/End: Complemental strand, 36114639 - 36114594
Alignment:
Q  117 ttctctaacaaacgataaaataaagttaaattgttttcatataagc 162  Q
    |||| ||||||| ||||||||||||||||||||||||  |||||||    
T  36114639 ttctataacaaaagataaaataaagttaaattgtttttgtataagc 36114594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 72 - 128
Target Start/End: Original strand, 2400065 - 2400121
Alignment:
Q  72 ttatagcataaacacttgtcatataagggcttatgtatacgttatttctctaacaaa 128  Q
    |||| ||||||||| || ||||||||| ||||||||||| ||| ||||| |||||||    
T  2400065 ttatggcataaacaattatcatataagtgcttatgtataagttgtttctataacaaa 2400121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 101 - 165
Target Start/End: Complemental strand, 8820405 - 8820341
Alignment:
Q  101 cttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgt 165  Q
    |||||||||| | ||||| | ||||||| ||||||||| |||| ||| ||||| |||||||||||    
T  8820405 cttatgtataagctatttatataacaaaagataaaatatagttcaatcgttttaatataagctgt 8820341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 74 - 110
Target Start/End: Original strand, 9404511 - 9404547
Alignment:
Q  74 atagcataaacacttgtcatataagggcttatgtata 110  Q
    ||||||||||||||| ||||||||| |||||||||||    
T  9404511 atagcataaacacttatcatataagtgcttatgtata 9404547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 105 - 185
Target Start/End: Complemental strand, 15866796 - 15866716
Alignment:
Q  105 tgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagctat 185  Q
    |||||| ||||||| | |||||||   |||||||||||  | ||||||||||||||||| ||| | | |||||||||||||    
T  15866796 tgtataagttatttttgtaacaaaatgtaaaataaagtcgacttgttttcatataagctataagccactttcataagctat 15866716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 109 - 161
Target Start/End: Original strand, 29288613 - 29288665
Alignment:
Q  109 tacgttatttctctaacaaacgataaaataaagttaaattgttttcatataag 161  Q
    |||| |||||||  |||||| |||||||||||| | |||||||||||||||||    
T  29288613 tacgctatttctacaacaaaagataaaataaaggtgaattgttttcatataag 29288665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 101 - 185
Target Start/End: Complemental strand, 29316907 - 29316823
Alignment:
Q  101 cttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagctat 185  Q
    ||||||| || | ||| ||| ||||| | |||||||||| ||||||||||||||| |||| || ||| || ||||||| ||||||    
T  29316907 cttatgtctaagctatatctttaacagaagataaaataaggttaaattgttttcacataatctataagctgttttcatcagctat 29316823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 153 - 185
Target Start/End: Original strand, 32848898 - 32848930
Alignment:
Q  153 tcatataagctgtaaactattttcataagctat 185  Q
    ||||||||||| |||||||||||||||||||||    
T  32848898 tcatataagctataaactattttcataagctat 32848930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 100 - 152
Target Start/End: Complemental strand, 33576727 - 33576675
Alignment:
Q  100 gcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttt 152  Q
    ||||||||||| ||||||||| ||||||| |||| |||||||| ||| |||||    
T  33576727 gcttatgtataggttatttctataacaaaagatacaataaagtcaaactgttt 33576675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 130 - 194
Target Start/End: Original strand, 43141838 - 43141902
Alignment:
Q  130 gataaaataaagttaaattgttttcatataagctgtaaactattttcataagctattttgaagag 194  Q
    |||||| |||||| ||||||||| |||||||||| |||  | ||||||||||||||  |||||||    
T  43141838 gataaagtaaagtcaaattgtttccatataagctataagatgttttcataagctatcctgaagag 43141902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 56; Significance: 4e-23; HSPs: 63)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 71 - 194
Target Start/End: Original strand, 29588788 - 29588910
Alignment:
Q  71 cttatagcataaacacttgtcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaact 170  Q
    |||||||||||||||||| | ||||||| ||||||||||| | ||||||| |||||||  ||||||||| |  |||||||||||||||||||| |||| |    
T  29588788 cttatagcataaacactttttatataagtgcttatgtataagctatttctataacaaaatataaaataatg-aaaattgttttcatataagctataaagt 29588886  T
Q  171 attttcataagctattttgaagag 194  Q
     ||||| |||||||| ||||||||    
T  29588887 gttttcgtaagctatgttgaagag 29588910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 94 - 193
Target Start/End: Complemental strand, 9202887 - 9202788
Alignment:
Q  94 ataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagctattttgaaga 193  Q
    ||||| |||||| |||| | ||||||| || |||| |||||||||||||||||||||||||||||||||  ||| || |||||||||| ||| |||||||    
T  9202887 ataagtgcttatatataagctatttctgtagcaaaagataaaataaagttaaattgttttcatataagcaataagctgttttcataagttatcttgaaga 9202788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 44 - 160
Target Start/End: Complemental strand, 20982324 - 20982208
Alignment:
Q  44 tgtttgcattaaaaacttcatttagtacttatagcataaacacttgtcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagtt 143  Q
    |||||| || || ||||||||| ||| ||||||||||||   ||| ||||||||| ||||||||||| | ||||||| ||||||| |||||||||||||     
T  20982324 tgtttggataaacaacttcattaagtgcttatagcataagtgcttatcatataagtgcttatgtataagctatttctataacaaaggataaaataaagtc 20982225  T
Q  144 aaattgttttcatataa 160  Q
    ||   ||||||||||||    
T  20982224 aacccgttttcatataa 20982208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 69 - 161
Target Start/End: Complemental strand, 37063238 - 37063146
Alignment:
Q  69 tacttatagcataaacacttgtcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataag 161  Q
    |||||||||||||||  ||||||||||||  |||||||||||   ||||||| ||||||| ||||||||||||| ||| | ||||||||||||    
T  37063238 tacttatagcataaatgcttgtcatataaatgcttatgtataaactatttctataacaaaagataaaataaagtcaaactattttcatataag 37063146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 125 - 181
Target Start/End: Complemental strand, 8158409 - 8158353
Alignment:
Q  125 caaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataag 181  Q
    |||| ||||||||||||||||||| |||||||||||||| |||| ||||||||||||    
T  8158409 caaaagataaaataaagttaaattattttcatataagctttaaattattttcataag 8158353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 72 - 136
Target Start/End: Complemental strand, 38819736 - 38819672
Alignment:
Q  72 ttatagcataaacacttgtcatataagggcttatgtatacgttatttctctaacaaacgataaaa 136  Q
    |||| |||||| ||||| ||||||||||||||||||||||| ||||||| ||||||| |||||||    
T  38819736 ttatggcataagcacttatcatataagggcttatgtatacgctatttctataacaaaagataaaa 38819672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 71 - 183
Target Start/End: Original strand, 39128547 - 39128659
Alignment:
Q  71 cttatagcataaacacttgtcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaact 170  Q
    |||||||||||| |  || | ||||| | ||||||||||| | || |||| ||||||| ||||||||||||| |||||||| ||| |||| || ||||||    
T  39128547 cttatagcataagcttttttaatatatgtgcttatgtataagctaattctataacaaaagataaaataaagtcaaattgttctcaaataaactataaact 39128646  T
Q  171 attttcataagct 183  Q
    ||||| |||||||    
T  39128647 atttttataagct 39128659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 114 - 185
Target Start/End: Original strand, 14295457 - 14295528
Alignment:
Q  114 tatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagctat 185  Q
    ||||||| ||||||| ||||||||||||| ||| |||||||||||||||| ||| || ||||| ||||||||    
T  14295457 tatttctataacaaaagataaaataaagtcaaactgttttcatataagctataagctgttttcgtaagctat 14295528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 100 - 185
Target Start/End: Complemental strand, 26209545 - 26209461
Alignment:
Q  100 gcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttc-atataagctgtaaactattttcataagctat 185  Q
    ||||||||||| ||||||||| ||||||  |||||||||||||  |||||||||| ||||||||| ||| || ||||||||||||||    
T  26209545 gcttatgtataagttatttctataacaa--gataaaataaagtccaattgttttcaatataagctataagctgttttcataagctat 26209461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 136 - 206
Target Start/End: Original strand, 7319379 - 7319449
Alignment:
Q  136 ataaagttaaattgttttcatataagctgtaaactattttcataagctattttgaagagctcagaaaaata 206  Q
    |||||||||||||||||||||||||||| |||||| ||||| |||||||| ||| ||| || | |||||||    
T  7319379 ataaagttaaattgttttcatataagctataaactgttttcgtaagctatcttggagaacttataaaaata 7319449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 78 - 180
Target Start/End: Complemental strand, 32059743 - 32059642
Alignment:
Q  78 cataaacacttgtcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttca 177  Q
    |||||| |||| ||||||||| ||||||||||| | | ||| | |||| || ||||||||||||| ||| |||||||||||||||| ||| || ||||||    
T  32059743 cataaatacttatcatataagtgcttatgtataagctgtttttgtaactaa-gataaaataaagtcaaactgttttcatataagctataagctgttttca 32059645  T
Q  178 taa 180  Q
    |||    
T  32059644 taa 32059642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 71 - 185
Target Start/End: Original strand, 32172561 - 32172675
Alignment:
Q  71 cttatagcataaacacttgtcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaact 170  Q
    |||| ||||||| | ||| ||||| ||| |||||||||||   |||||||  |||||| |||||||| |||| || |||||| |||||||||| ||| ||    
T  32172561 cttacagcataagcgcttatcatacaagagcttatgtataaactatttctacaacaaaagataaaatgaagtcaagttgtttacatataagctataagct 32172660  T
Q  171 attttcataagctat 185  Q
     ||||||||||||||    
T  32172661 gttttcataagctat 32172675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 100 - 186
Target Start/End: Complemental strand, 33459068 - 33458982
Alignment:
Q  100 gcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagctatt 186  Q
    ||||||||||| ||||||||| ||||||| || ||||||||||| ||||||||  |||||| || ||| |||||||||  |||||||    
T  33459068 gcttatgtataagttatttctataacaaaagacaaaataaagttgaattgtttatatataaactataacctattttcaatagctatt 33458982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 102 - 163
Target Start/End: Complemental strand, 29117061 - 29117000
Alignment:
Q  102 ttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagct 163  Q
    ||||||||| ||||||||| ||||||| ||||||||||||| ||| ||||||| ||||||||    
T  29117061 ttatgtatatgttatttctataacaaaagataaaataaagtcaaactgttttcgtataagct 29117000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 72 - 156
Target Start/End: Complemental strand, 6738568 - 6738484
Alignment:
Q  72 ttatagcataaacacttgtcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcat 156  Q
    ||||||||||||||||| |||||||||  |||||||||| | ||||||  ||| ||| || |||||||||| ||||| |||||||    
T  6738568 ttatagcataaacacttatcatataagtacttatgtataagctatttcaataataaaagacaaaataaagtcaaattcttttcat 6738484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 101 - 185
Target Start/End: Original strand, 7674586 - 7674670
Alignment:
Q  101 cttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagctat 185  Q
    ||||| |||| | ||||||| || |||| ||||||||||| ||||||||||||| |||||||  |||| | ||||||||||||||    
T  7674586 cttatatataagctatttctataccaaaagataaaataaatttaaattgttttcttataagccataaaatgttttcataagctat 7674670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 116 - 160
Target Start/End: Complemental strand, 12595857 - 12595813
Alignment:
Q  116 tttctctaacaaacgataaaataaagttaaattgttttcatataa 160  Q
    ||||| ||||||| |||||||||||||||||||||||||||||||    
T  12595857 tttctataacaaaagataaaataaagttaaattgttttcatataa 12595813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 93 - 196
Target Start/End: Complemental strand, 16945121 - 16945020
Alignment:
Q  93 tataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagctattttgaag 192  Q
    |||||| ||||||||||| | |||||||  || ||| |||||||||  ||||||||||||||||| ||||| ||| |||||||||| | ||||  |||||    
T  16945121 tataagtgcttatgtataagctatttctacaagaaaagataaaata--gttaaattgttttcatagaagctataagctattttcattaactatcctgaag 16945024  T
Q  193 agct 196  Q
    ||||    
T  16945023 agct 16945020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 144 - 196
Target Start/End: Complemental strand, 32408681 - 32408629
Alignment:
Q  144 aaattgttttcatataagctgtaaactattttcataagctattttgaagagct 196  Q
    ||||| |||||||||||||| |||||||||||||||||||||  |||||||||    
T  32408681 aaattattttcatataagctataaactattttcataagctatcctgaagagct 32408629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 91 - 163
Target Start/End: Complemental strand, 35135804 - 35135732
Alignment:
Q  91 catataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagct 163  Q
    |||||||| | ||||||||| | ||||||| ||||||| ||||||||||||| ||| | ||||||||||||||    
T  35135804 catataagtgtttatgtataagatatttctataacaaaagataaaataaagtcaaactattttcatataagct 35135732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 130 - 185
Target Start/End: Original strand, 12425538 - 12425593
Alignment:
Q  130 gataaaataaagttaaattgttttcatataagctgtaaactattttcataagctat 185  Q
    ||||||||||||||||||||||||| |||||||| ||| || |||||| |||||||    
T  12425538 gataaaataaagttaaattgttttcgtataagctataagctgttttcacaagctat 12425593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 71 - 122
Target Start/End: Complemental strand, 27104576 - 27104525
Alignment:
Q  71 cttatagcataaacacttgtcatataagggcttatgtatacgttatttctct 122  Q
    |||||||||||||||||| ||||||||| ||||| ||||| |||||||||||    
T  27104576 cttatagcataaacacttatcatataagtgcttacgtataagttatttctct 27104525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 71 - 146
Target Start/End: Complemental strand, 27106085 - 27106010
Alignment:
Q  71 cttatagcataaacacttgtcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaa 146  Q
    |||| ||||||||||||| |  |||||| ||||| ||||| || |||||| ||||||| |||||||||||||||||    
T  27106085 cttacagcataaacacttattgtataagtgcttacgtataagtcatttctataacaaaagataaaataaagttaaa 27106010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 85 - 196
Target Start/End: Original strand, 36539668 - 36539779
Alignment:
Q  85 acttgtcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagcta 184  Q
    |||| ||||||||| |||||||| || | ||||| | || |||| ||||||||||||| ||  |||||||||||||||| |||  | |||| ||||| ||    
T  36539668 acttatcatataagtgcttatgtgtaagctatttgtttatcaaaagataaaataaagtcaacctgttttcatataagctataagttgtttttataagtta 36539767  T
Q  185 ttttgaagagct 196  Q
    || |||||||||    
T  36539768 ttctgaagagct 36539779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 102 - 185
Target Start/End: Complemental strand, 38047986 - 38047903
Alignment:
Q  102 ttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagctat 185  Q
    ||||||||| | ||| ||||||||||| ||||||||||||| ||||| ||||||||||  || ||  || ||||||||||||||    
T  38047986 ttatgtataagctatatctctaacaaaagataaaataaagtcaaattattttcatatatactatatgctgttttcataagctat 38047903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 94 - 185
Target Start/End: Original strand, 39105395 - 39105486
Alignment:
Q  94 ataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagctat 185  Q
    ||||| ||||||||||| | ||||||| || | ||  || |||| |||||||||||||||| |||||||| ||| || ||||||||||||||    
T  39105395 ataagcgcttatgtataagctatttctatagctaaatatgaaatgaagttaaattgttttcgtataagctataatctgttttcataagctat 39105486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 90 - 153
Target Start/End: Complemental strand, 40097546 - 40097483
Alignment:
Q  90 tcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgtttt 153  Q
    ||||||||| || |||||||| ||||||||| ||||| | ||||||||| ||||||||||||||    
T  40097546 tcatataagtgcgtatgtataagttatttctataacagaagataaaatagagttaaattgtttt 40097483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 114 - 156
Target Start/End: Original strand, 10363701 - 10363743
Alignment:
Q  114 tatttctctaacaaacgataaaataaagttaaattgttttcat 156  Q
    ||||||| ||||||| |||||||||||||||||||||||||||    
T  10363701 tatttctataacaaaagataaaataaagttaaattgttttcat 10363743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 196
Target Start/End: Original strand, 12975306 - 12975380
Alignment:
Q  122 taacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagctattttgaagagct 196  Q
    |||||||  |||||||||| | |||||||||||||||||||| ||| || | |||||||||||| ||| ||||||    
T  12975306 taacaaagaataaaataaaatcaaattgttttcatataagctataagctgtgttcataagctatcttggagagct 12975380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 102 - 160
Target Start/End: Complemental strand, 28586897 - 28586839
Alignment:
Q  102 ttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataa 160  Q
    ||||||||||  ||||||| ||||||| ||||||||||||| ||| |||||||||||||    
T  28586897 ttatgtatacactatttctataacaaaagataaaataaagtcaaactgttttcatataa 28586839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 134 - 196
Target Start/End: Complemental strand, 35553287 - 35553225
Alignment:
Q  134 aaataaagttaaattgttttcatataagctgtaaactattttcataagctattttgaagagct 196  Q
    |||| |||| ||||| |||||||||||||| ||||||||||||||| |||||| || ||||||    
T  35553287 aaattaagtcaaattcttttcatataagctataaactattttcatacgctattctggagagct 35553225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 196
Target Start/End: Original strand, 36639481 - 36639555
Alignment:
Q  122 taacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagctattttgaagagct 196  Q
    ||||||| ||||||||||| | ||| |||||||||| ||| | || ||| |||||||||||||| ||||||||||    
T  36639481 taacaaaagataaaataaaatcaaaatgttttcatacaagttatagactgttttcataagctatcttgaagagct 36639555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 71 - 140
Target Start/End: Original strand, 26516206 - 26516275
Alignment:
Q  71 cttatagcataaacacttgtcatataagggcttatgtatacgttatttctctaacaaacgataaaataaa 140  Q
    |||||||||||| | ||| ||||||||| ||||||||||| | |||||||  |||||| |||||||||||    
T  26516206 cttatagcataagcgcttatcatataagtgcttatgtataagctatttctaaaacaaaagataaaataaa 26516275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 101 - 165
Target Start/End: Original strand, 465892 - 465956
Alignment:
Q  101 cttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgt 165  Q
    ||||| |||| | ||||||| | ||||| ||||||||||||||||||||||||  ||||||||||    
T  465892 cttatatataagctatttctatgacaaaagataaaataaagttaaattgtttttgtataagctgt 465956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 103 - 163
Target Start/End: Original strand, 985573 - 985633
Alignment:
Q  103 tatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagct 163  Q
    |||||||| ||||||||  ||||||| ||||||||||||| ||| |||||||| |||||||    
T  985573 tatgtatatgttatttccataacaaaagataaaataaagtcaaactgttttcacataagct 985633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 139
Target Start/End: Original strand, 10391265 - 10391329
Alignment:
Q  75 tagcataaacacttgtcatataagggcttatgtatacgttatttctctaacaaacgataaaataa 139  Q
    |||||||||||||| ||||||||| ||||| ||||| | ||||| | ||||||| ||||||||||    
T  10391265 tagcataaacacttatcatataagtgcttacgtataagctatttttataacaaaagataaaataa 10391329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 154
Target Start/End: Complemental strand, 17756872 - 17756808
Alignment:
Q  90 tcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttc 154  Q
    ||||||||| ||||||||||  ||| ||||| ||||| | ||||||||||||| |||||||||||    
T  17756872 tcatataagtgcttatgtatgagttgtttctttaacagaagataaaataaagtcaaattgttttc 17756808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 186
Target Start/End: Complemental strand, 18704178 - 18704083
Alignment:
Q  90 tcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagctatt 186  Q
    |||||||||  |||||||||| ||||||||| ||||||| |||||| |||||| ||  | |||| ||||||||| |||  | |||||||||||||||    
T  18704178 tcatataagttcttatgtataagttatttctataacaaaagataaa-taaagtcaagctatttttatataagctataagttgttttcataagctatt 18704083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 185
Target Start/End: Original strand, 26516354 - 26516422
Alignment:
Q  117 ttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagctat 185  Q
    |||||||||||  ||||||||||||| ||| |  ||||||||||| | |||||| ||||||||||||||    
T  26516354 ttctctaacaatagataaaataaagtcaaactactttcatataagttataaactgttttcataagctat 26516422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 154
Target Start/End: Complemental strand, 40048419 - 40048359
Alignment:
Q  94 ataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttc 154  Q
    ||||| ||||||||||| ||| ||||| ||||||| ||||||||||||||| ||| |||||    
T  40048419 ataagtgcttatgtataagttgtttctataacaaaagataaaataaagttatattattttc 40048359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 71 - 142
Target Start/End: Complemental strand, 29115375 - 29115304
Alignment:
Q  71 cttatagcataaacacttgtcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagt 142  Q
    ||||||||||||||| || ||||| ||| ||||||||||| | |||||||  |||||| | |||||||||||    
T  29115375 cttatagcataaacatttatcataaaagtgcttatgtataagctatttctacaacaaaaggtaaaataaagt 29115304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 91 - 196
Target Start/End: Complemental strand, 34117675 - 34117573
Alignment:
Q  91 catataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagctattttga 190  Q
    ||||| || ||||||||||| ||||||||| ||||||| |||||||||| ||   ||| ||| |||||||||| |||  |  ||||||||||||| |||     
T  34117675 catattagtgcttatgtataagttatttctttaacaaaagataaaataaggt---attatttacatataagctataagttgctttcataagctatcttgg 34117579  T
Q  191 agagct 196  Q
    ||||||    
T  34117578 agagct 34117573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 103 - 154
Target Start/End: Original strand, 42583089 - 42583140
Alignment:
Q  103 tatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttc 154  Q
    |||||||| | ||||||| ||||||| ||| |||||||||||||||||||||    
T  42583089 tatgtataaggtatttctataacaaaagatgaaataaagttaaattgttttc 42583140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 114 - 152
Target Start/End: Original strand, 7853609 - 7853647
Alignment:
Q  114 tatttctctaacaaacgataaaataaagttaaattgttt 152  Q
    ||||||| ||||||| |||||||||||||||||||||||    
T  7853609 tatttctataacaaaagataaaataaagttaaattgttt 7853647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 114 - 156
Target Start/End: Original strand, 10303752 - 10303794
Alignment:
Q  114 tatttctctaacaaacgataaaataaagttaaattgttttcat 156  Q
    ||||||| ||||||| ||||||||||||| |||||||||||||    
T  10303752 tatttctataacaaaagataaaataaagtcaaattgttttcat 10303794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 71 - 181
Target Start/End: Complemental strand, 14716632 - 14716522
Alignment:
Q  71 cttatagcataaacacttgtcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaact 170  Q
    ||||||||||||  | |||||||||||| ||||||||||| ||| ||||| ||  ||| || | |||| |||| |  |||||  ||||||||| ||||||    
T  14716632 cttatagcataaggatttgtcatataagtgcttatgtataagttgtttctatagtaaaagaaataatacagttgacctgtttctatataagctataaact 14716533  T
Q  171 attttcataag 181  Q
     ||||||||||    
T  14716532 gttttcataag 14716522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 96 - 178
Target Start/End: Original strand, 40452224 - 40452306
Alignment:
Q  96 aagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcat 178  Q
    ||||||||||||||| | ||||||| || ||||  |||||||||||||||||| ||||  | |||||| ||| || |||||||    
T  40452224 aagggcttatgtataagatatttctatagcaaataataaaataaagttaaattattttggtttaagctataagctgttttcat 40452306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 162
Target Start/End: Complemental strand, 912792 - 912719
Alignment:
Q  90 tcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagt-taaattgttttcatataagc 162  Q
    ||||||||| | ||||| ||| ||||||||| ||||| |  ||||||||||||  |||||||||||||||||||    
T  912792 tcatataagcgtttatgaataagttatttctataacacaatataaaataaagtcaaaattgttttcatataagc 912719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 194
Target Start/End: Original strand, 2563164 - 2563241
Alignment:
Q  117 ttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagctattttgaagag 194  Q
    |||| ||||||| | |||||  ||||| |||||||||  |||||||| ||||||||||||| ||||||| ||| ||||    
T  2563164 ttctataacaaaaggtaaaacgaagttcaattgtttttgtataagctataaactattttcacaagctatcttggagag 2563241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 183
Target Start/End: Complemental strand, 12407792 - 12407711
Alignment:
Q  102 ttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagct 183  Q
    ||||||||| | ||||||| ||||||| ||||||||||||| ||  ||||||||| |||| | |||   |||||||||||||    
T  12407792 ttatgtataagctatttctataacaaaagataaaataaagtaaatctgttttcatgtaagttataagtcattttcataagct 12407711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 100 - 185
Target Start/End: Original strand, 16889672 - 16889757
Alignment:
Q  100 gcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagctat 185  Q
    ||||||||||| | ||||||  ||||||| |||||| | |||| ||| |||||| ||| ||||| ||| || ||||||||||||||    
T  16889672 gcttatgtataagctatttccataacaaaagataaacttaagtcaaactgtttttatagaagctataagctgttttcataagctat 16889757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 183
Target Start/End: Complemental strand, 18857511 - 18857450
Alignment:
Q  122 taacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagct 183  Q
    ||||| ||||||||||||||| ||||||||||  ||||| || ||| || ||||||||||||    
T  18857511 taacacacgataaaataaagtcaaattgtttttctataatctataagctgttttcataagct 18857450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 94 - 163
Target Start/End: Original strand, 34112806 - 34112875
Alignment:
Q  94 ataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagct 163  Q
    ||||| ||||||||||| | ||||||| ||  ||| ||| || ||||||||| |||||||||||||||||    
T  34112806 ataagcgcttatgtataagctatttctatagtaaaagattaattaaagttaagttgttttcatataagct 34112875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 101 - 142
Target Start/End: Original strand, 34690812 - 34690853
Alignment:
Q  101 cttatgtatacgttatttctctaacaaacgataaaataaagt 142  Q
    |||||||||||| ||||||| ||||||| |||||||||||||    
T  34690812 cttatgtatacgctatttctataacaaaagataaaataaagt 34690853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 159
Target Start/End: Original strand, 35963155 - 35963244
Alignment:
Q  70 acttatagcataaacacttgtcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatata 159  Q
    ||||||||||||| |  || ||| ||||| |||| ||||||  |||||||| ||| ||| ||| ||||||| ||||| ||||||||||||    
T  35963155 acttatagcataagcgattatcaaataagtgcttgtgtataaattatttctataagaaaagatcaaataaaattaaactgttttcatata 35963244  T

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Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 185
Target Start/End: Original strand, 39141880 - 39141990
Alignment:
Q  73 tatagcataaacacttgtcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactat 172  Q
    |||||||||| || |  ||||||||| | ||||||| | |||||  || |||||||  |||||||| ||| |||||  ||||||||||||| |||||  |    
T  39141880 tatagcataaccattcatcatataagtgattatgtacaagttat--ctataacaaaacataaaatatagtcaaattaatttcatataagctataaacagt 39141977  T
Q  173 tttcataagctat 185  Q
    |||||||||||||    
T  39141978 tttcataagctat 39141990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 163
Target Start/End: Complemental strand, 39823284 - 39823191
Alignment:
Q  71 cttatagcataaacacttgtcatataagggcttatgtatacg-ttatttctctaacaaacgataaaataaagttaaattgttttcatataagct 163  Q
    |||| ||||||| | ||||| ||| ||||||||||||||  | |||||| | ||||||| ||||||||||||| ||| |  |||||||||||||    
T  39823284 cttacagcataagcgcttgttatagaagggcttatgtatcagattatttatataacaaaagataaaataaagtcaaactactttcatataagct 39823191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 101 - 161
Target Start/End: Original strand, 4855636 - 4855696
Alignment:
Q  101 cttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataag 161  Q
    |||||||||  | ||||| | |||||||  ||||||||||||||||||||| |||||||||    
T  4855636 cttatgtattagctatttttataacaaaaaataaaataaagttaaattgttatcatataag 4855696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 90 - 142
Target Start/End: Complemental strand, 7096270 - 7096218
Alignment:
Q  90 tcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagt 142  Q
    ||||| ||| ||||||||||| | ||||||| ||||||| |||||||||||||    
T  7096270 tcatacaagtgcttatgtataagctatttctataacaaaagataaaataaagt 7096218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 122 - 154
Target Start/End: Original strand, 11835236 - 11835268
Alignment:
Q  122 taacaaacgataaaataaagttaaattgttttc 154  Q
    ||||||| |||||||||||||||||||||||||    
T  11835236 taacaaaagataaaataaagttaaattgttttc 11835268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 71 - 163
Target Start/End: Complemental strand, 14715001 - 14714910
Alignment:
Q  71 cttatagcataaacacttgtcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagct 163  Q
    ||||| |||||||| ||| || |||||| | ||||||||| | ||||||| |||||||  |||||  ||||||||  ||||||||||||||||    
T  14715001 cttatggcataaacgcttctcgtataagtgattatgtataagctatttctataacaaaacataaac-aaagttaagctgttttcatataagct 14714910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 42 - 142
Target Start/End: Complemental strand, 39257577 - 39257477
Alignment:
Q  42 cttgtttgcattaaaaacttcatttagtacttatagcataaacacttgtcatataagggcttatgtatacgttatttctctaacaaacgataaaataaag 141  Q
    |||||||| || || ||||| ||| ||  ||||||||||||||  || |||| |||| ||||||||||| | ||| ||| ||||||| | ||||||||||    
T  39257577 cttgtttggataaacaacttaattaagcgcttatagcataaactattatcatgtaagtgcttatgtatatgctatctctataacaaaaggtaaaataaag 39257478  T
Q  142 t 142  Q
    |    
T  39257477 t 39257477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 133 - 185
Target Start/End: Complemental strand, 41957551 - 41957499
Alignment:
Q  133 aaaataaagttaaattgttttcatataagctgtaaactattttcataagctat 185  Q
    ||||| |||||||||||||||||| |||| | ||| || ||||||||||||||    
T  41957551 aaaatgaagttaaattgttttcatgtaagttataagctgttttcataagctat 41957499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 54; Significance: 7e-22; HSPs: 63)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 76 - 185
Target Start/End: Original strand, 38462194 - 38462303
Alignment:
Q  76 agcataaacacttgtcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactatttt 175  Q
    ||||||||||||| ||||||||| | |||| |||| | ||||||| || |||| ||||||||||||| ||| |||||||||||| ||| |||||| ||||    
T  38462194 agcataaacacttatcatataagtgtttatttataagctatttctataccaaaagataaaataaagtcaaactgttttcatatatgctataaactgtttt 38462293  T
Q  176 cataagctat 185  Q
    ||||||||||    
T  38462294 cataagctat 38462303  T

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Target: chr3; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 122 - 194
Target Start/End: Complemental strand, 37689495 - 37689423
Alignment:
Q  122 taacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagctattttgaagag 194  Q
    ||||||| |||||| |||||||||||| |||||||||||||| ||||||||||||||||||||||||| ||||    
T  37689495 taacaaaagataaagtaaagttaaattattttcatataagctataaactattttcataagctattttgtagag 37689423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 90 - 185
Target Start/End: Original strand, 22232753 - 22232848
Alignment:
Q  90 tcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagctat 185  Q
    ||||||||  ||| ||||||| | ||||| | ||||||| ||||||||||||| ||| ||||||||||||||  |||| |||||||||||||||||    
T  22232753 tcatataaatgctcatgtataagctatttatataacaaatgataaaataaagtcaaactgttttcatataagtcgtaagctattttcataagctat 22232848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 114 - 193
Target Start/End: Complemental strand, 33405286 - 33405207
Alignment:
Q  114 tatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagctattttgaaga 193  Q
    ||||||| || |||| | |||||||||||||| ||||||||||||||||| ||| || |||||||||||||| |||||||    
T  33405286 tatttctatagcaaaaggtaaaataaagttaatttgttttcatataagctataagctgttttcataagctatcttgaaga 33405207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 114 - 196
Target Start/End: Original strand, 52618954 - 52619036
Alignment:
Q  114 tatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagctattttgaagagct 196  Q
    |||||||  |||||| ||| |||||||||||||||||||||||||||| | ||| || |||||| ||||||| ||||||||||    
T  52618954 tatttctaaaacaaatgattaaataaagttaaattgttttcatataagttataagctgttttcacaagctatcttgaagagct 52619036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 103 - 180
Target Start/End: Original strand, 1395611 - 1395688
Alignment:
Q  103 tatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataa 180  Q
    |||||||| | ||||||| ||||||| ||||||||||||| ||||| |||||||||||||| | |||| |||||||||    
T  1395611 tatgtataagctatttctataacaaaagataaaataaagtcaaattattttcatataagctatgaactgttttcataa 1395688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 112 - 161
Target Start/End: Complemental strand, 10101597 - 10101548
Alignment:
Q  112 gttatttctctaacaaacgataaaataaagttaaattgttttcatataag 161  Q
    ||||||||| ||||||| ||||||||||||||||||||||||||||||||    
T  10101597 gttatttctataacaaaagataaaataaagttaaattgttttcatataag 10101548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 112 - 161
Target Start/End: Complemental strand, 10212522 - 10212473
Alignment:
Q  112 gttatttctctaacaaacgataaaataaagttaaattgttttcatataag 161  Q
    ||||||||| ||||||| ||||||||||||||||||||||||||||||||    
T  10212522 gttatttctataacaaaagataaaataaagttaaattgttttcatataag 10212473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 104 - 165
Target Start/End: Original strand, 42809242 - 42809303
Alignment:
Q  104 atgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgt 165  Q
    ||||||| | ||||||| ||||||| ||||||||| ||||||||||||||||||||||||||    
T  42809242 atgtataagctatttctataacaaaagataaaatatagttaaattgttttcatataagctgt 42809303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 90 - 169
Target Start/End: Complemental strand, 905113 - 905034
Alignment:
Q  90 tcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaac 169  Q
    ||||||||| ||||| ||||| | ||||||| ||||||| ||||||||||||| || |||||| |||||||||| |||||    
T  905113 tcatataagcgcttaagtataagctatttctataacaaaagataaaataaagtcaatttgtttgcatataagctttaaac 905034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 114 - 169
Target Start/End: Complemental strand, 15304466 - 15304411
Alignment:
Q  114 tatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaac 169  Q
    ||||||| ||||||| ||||||||||||||||||||||||||||||| || |||||    
T  15304466 tatttctataacaaaagataaaataaagttaaattgttttcatataaactctaaac 15304411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 90 - 157
Target Start/End: Complemental strand, 44374787 - 44374720
Alignment:
Q  90 tcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcata 157  Q
    ||||||||| ||||||||||| | ||| ||| ||||||| ||||||||||||| ||||||||||||||    
T  44374787 tcatataagtgcttatgtataagctatatctttaacaaaagataaaataaagtcaaattgttttcata 44374720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 73 - 139
Target Start/End: Complemental strand, 20174048 - 20173982
Alignment:
Q  73 tatagcataaacacttgtcatataagggcttatgtatacgttatttctctaacaaacgataaaataa 139  Q
    ||||||||||||||| || ||||||| ||||||||||  ||||||||| ||||||| ||||||||||    
T  20174048 tatagcataaacactagttatataagtgcttatgtattagttatttctataacaaaagataaaataa 20173982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 94 - 196
Target Start/End: Complemental strand, 35127510 - 35127408
Alignment:
Q  94 ataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagctattttgaaga 193  Q
    ||||| ||||||||||| | ||||||| ||||||| |||| | |||||||||||||||||   ||| ||| |||||||||||||||  |||| ||| |||    
T  35127510 ataagtgcttatgtataggctatttctataacaaaagatatactaaagttaaattgtttttgcatatgctataaactattttcatacactatcttggaga 35127411  T
Q  194 gct 196  Q
    |||    
T  35127410 gct 35127408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 71 - 153
Target Start/End: Original strand, 39971227 - 39971309
Alignment:
Q  71 cttatagcataaacacttgtcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgtttt 153  Q
    |||||| ||| ||||||| ||||||||| ||||||||||| |||| || | ||||||| ||||||||||||  ||||||||||    
T  39971227 cttataacatcaacacttatcatataagtgcttatgtataagttacttatataacaaaagataaaataaagccaaattgtttt 39971309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 116 - 165
Target Start/End: Original strand, 42808932 - 42808981
Alignment:
Q  116 tttctctaacaaacgataaaataaagttaaattgttttcatataagctgt 165  Q
    ||||| ||||||| |||||||||||||||||||||||| |||||||||||    
T  42808932 tttctataacaaaagataaaataaagttaaattgtttttatataagctgt 42808981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 84 - 160
Target Start/End: Complemental strand, 22214830 - 22214754
Alignment:
Q  84 cacttgtcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataa 160  Q
    ||||| || |||||| || ||||||||  |||||||| ||||||| ||||||||||||| ||||||| |||||||||    
T  22214830 cacttatcgtataagtgcgtatgtataaattatttctataacaaaggataaaataaagtgaaattgtattcatataa 22214754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 130 - 190
Target Start/End: Complemental strand, 25447347 - 25447287
Alignment:
Q  130 gataaaataaagttaaattgttttcatataagctgtaaactattttcataagctattttga 190  Q
    ||||||||||| ||||||||||||  |||||||| |||||| |||||||||||||| ||||    
T  25447347 gataaaataaacttaaattgtttttgtataagctataaactgttttcataagctatcttga 25447287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 71 - 163
Target Start/End: Complemental strand, 41029013 - 41028921
Alignment:
Q  71 cttatagcataaacacttgtcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagct 163  Q
    |||||||| ||||  ||| ||||||||| ||||||||||| | ||||||| ||||||| || |||||||||| ||  |||||||| |||||||    
T  41029013 cttatagcttaaatgcttatcatataagtgcttatgtataagctatttctataacaaaagaaaaaataaagtcaatctgttttcaaataagct 41028921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 102 - 153
Target Start/End: Complemental strand, 2128382 - 2128331
Alignment:
Q  102 ttatgtatacgttatttctctaacaaacgataaaataaagttaaattgtttt 153  Q
    ||||||||| | ||||||| ||||||| ||||||||||||||||||||||||    
T  2128382 ttatgtataagctatttctataacaaaagataaaataaagttaaattgtttt 2128331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 102 - 185
Target Start/End: Original strand, 3365344 - 3365427
Alignment:
Q  102 ttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagctat 185  Q
    ||||||||| | ||||||| ||||| | |||||||| |||| || ||||||| ||||||  |||||||| ||||||||||||||    
T  3365344 ttatgtatatgctatttctataacataagataaaattaagtcaagttgtttttatataaattgtaaactgttttcataagctat 3365427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 130 - 185
Target Start/End: Original strand, 14145879 - 14145934
Alignment:
Q  130 gataaaataaagttaaattgttttcatataagctgtaaactattttcataagctat 185  Q
    ||||||||||||||||||||||||| |||| ||| |||  ||||||||||||||||    
T  14145879 gataaaataaagttaaattgttttcgtatatgctataagttattttcataagctat 14145934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 131 - 194
Target Start/End: Original strand, 22031164 - 22031227
Alignment:
Q  131 ataaaataaagttaaattgttttcatataagctgtaaactattttcataagctattttgaagag 194  Q
    |||||||||||  ||| |||||||||||||  |||||| | |||||||||||||||||||||||    
T  22031164 ataaaataaagccaaactgttttcatataaaatgtaaattgttttcataagctattttgaagag 22031227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 90 - 153
Target Start/End: Original strand, 36189493 - 36189556
Alignment:
Q  90 tcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgtttt 153  Q
    ||||||||| |  |||||||| | ||||||||| ||||| ||||||||||||||||||||||||    
T  36189493 tcatataagtgagtatgtataagctatttctcttacaaaagataaaataaagttaaattgtttt 36189556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 114 - 185
Target Start/End: Complemental strand, 36783453 - 36783382
Alignment:
Q  114 tatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagctat 185  Q
    ||||||| || |||| ||||||||||||| ||||||||||||||||| || | | || ||||||||||||||    
T  36783453 tatttctataccaaaagataaaataaagtaaaattgttttcatataaactattagctgttttcataagctat 36783382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 90 - 193
Target Start/End: Original strand, 47217284 - 47217387
Alignment:
Q  90 tcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagctattttg 189  Q
    |||||||||  ||||| |||| | |||||||||||||||  ||||||||| || ||||||| || | ||||||| |||  | ||||||||| ||||||||    
T  47217284 tcatataagtacttatctataagctatttctctaacaaaacataaaataatgtgaaattgtctttacataagctataagttgttttcataacctattttg 47217383  T
Q  190 aaga 193  Q
    ||||    
T  47217384 aaga 47217387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 65 - 155
Target Start/End: Complemental strand, 3016016 - 3015927
Alignment:
Q  65 ttagtacttatagcataaacacttgtcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttca 155  Q
    ||||| |||||| ||||||||||| | ||||||| ||||||||||   |||||||| ||||||| |||||||| |||| ||| ||||||||    
T  3016016 ttagtgcttataacataaacacttattatataagtgcttatgtattaattatttctataacaaa-gataaaatgaagtcaaactgttttca 3015927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 44 - 183
Target Start/End: Original strand, 23785134 - 23785275
Alignment:
Q  44 tgtttgcattaaaaacttcatttagtacttatagcataaacacttgtcatataagg--gcttatgtatacgttatttctctaacaaacgataaaataaag 141  Q
    ||||||||| || ||||| ||| ||| |||||||||||||   || ||||||||    ||||||| ||| |||||||||  | || | ||||||||||||    
T  23785134 tgtttgcataaacaacttaattaagtgcttatagcataaatgtttatcatataaatatgcttatgcataagttatttctacagcagaagataaaataaag 23785233  T
Q  142 ttaaattgttttcatataagctgtaaactattttcataagct 183  Q
    | ||| ||| |||||||||||| |||||| |||||| |||||    
T  23785234 tcaaactgtattcatataagctataaactgttttcacaagct 23785275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 131 - 185
Target Start/End: Original strand, 37795564 - 37795618
Alignment:
Q  131 ataaaataaagttaaattgttttcatataagctgtaaactattttcataagctat 185  Q
    ||||||||| |||||||||||||| |||||||| |||||| ||| ||||||||||    
T  37795564 ataaaataaggttaaattgttttcgtataagctataaactgtttccataagctat 37795618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 102 - 156
Target Start/End: Complemental strand, 48365010 - 48364956
Alignment:
Q  102 ttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcat 156  Q
    ||||||||| ||||||||  ||||||| ||||||||||||| |||||||||||||    
T  48365010 ttatgtataagttatttcgataacaaaagataaaataaagtcaaattgttttcat 48364956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 112 - 161
Target Start/End: Original strand, 10357382 - 10357431
Alignment:
Q  112 gttatttctctaacaaacgataaaataaagttaaattgttttcatataag 161  Q
    ||||||||| ||||||| |||||||||| |||||||| ||||||||||||    
T  10357382 gttatttctataacaaaagataaaataatgttaaatttttttcatataag 10357431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 131 - 196
Target Start/End: Complemental strand, 20170810 - 20170745
Alignment:
Q  131 ataaaataaagttaaattgttttcatataagctgtaaactattttcataagctattttgaagagct 196  Q
    ||||||||||||| |||||||||| || ||||| |||||| ||||| |||||||| ||| ||||||    
T  20170810 ataaaataaagttcaattgttttcgtaaaagctataaactgttttcctaagctatcttgtagagct 20170745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 133 - 178
Target Start/End: Original strand, 21367824 - 21367869
Alignment:
Q  133 aaaataaagttaaattgttttcatataagctgtaaactattttcat 178  Q
    |||||||||| ||| ||||||||||||||||||||||| |||||||    
T  21367824 aaaataaagtcaaaatgttttcatataagctgtaaactgttttcat 21367869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 86 - 185
Target Start/End: Complemental strand, 24158649 - 24158551
Alignment:
Q  86 cttgtcatataagggcttatgtatacgttatttctctaacaaacg-ataaaataaagttaaattgttttcatataagctgtaaactattttcataagcta 184  Q
    ||||||||||||| ||||||||||| ||||||||| ||||||| | ||||| |||||| ||| |||||  |||||||   ||| || |||||||||||||    
T  24158649 cttgtcatataagtgcttatgtataagttatttctataacaaatgaataaagtaaagtgaaactgttt--atataagtaataagctgttttcataagcta 24158552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 90 - 191
Target Start/End: Complemental strand, 32095334 - 32095233
Alignment:
Q  90 tcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagctattttg 189  Q
    |||||||||  || || |||| ||||||||| ||||||| |||||||| |||||||||||||||  ||||| || ||| |  ||||||||| |||| |||    
T  32095334 tcatataagcactcatatataagttatttctataacaaaagataaaattaagttaaattgtttttgtataaactataagccgttttcataatctatcttg 32095235  T
Q  190 aa 191  Q
    ||    
T  32095234 aa 32095233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 114 - 186
Target Start/End: Complemental strand, 34254928 - 34254855
Alignment:
Q  114 tatttctctaacaaacgataaaataaagttaaattgttttc-atataagctgtaaactattttcataagctatt 186  Q
    ||||||| || |||| ||||||||||||| ||| ||||||  |||| |||| ||||||||||||||||||||||    
T  34254928 tatttctgtagcaaatgataaaataaagtcaaactgttttttatattagctataaactattttcataagctatt 34254855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 114 - 163
Target Start/End: Complemental strand, 49587035 - 49586986
Alignment:
Q  114 tatttctctaacaaacgataaaataaagttaaattgttttcatataagct 163  Q
    ||||||| ||||||| ||||||||||||| ||| ||||||||||||||||    
T  49587035 tatttctataacaaaagataaaataaagtcaaactgttttcatataagct 49586986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 163
Target Start/End: Complemental strand, 8007837 - 8007765
Alignment:
Q  91 catataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagct 163  Q
    |||| ||||||||||||||| | | ||||| ||||||| |||||| |||||| ||| |||| |||||||||||    
T  8007837 catacaagggcttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagct 8007765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 72 - 140
Target Start/End: Complemental strand, 16790249 - 16790181
Alignment:
Q  72 ttatagcataaacacttgtcatataagggcttatgtatacgttatttctctaacaaacgataaaataaa 140  Q
    ||||||||||| |  || ||||||||| |||||| |||| ||||||||| ||||||| |||||||||||    
T  16790249 ttatagcataagcgtttatcatataagtgcttatatataagttatttctataacaaaagataaaataaa 16790181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 85 - 161
Target Start/End: Complemental strand, 33307728 - 33307652
Alignment:
Q  85 acttgtcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataag 161  Q
    |||| ||||||||| ||||||||||| | ||||||  |||||||  || ||||||||| ||||| ||||||||||||    
T  33307728 acttatcatataagtgcttatgtataagctatttcagtaacaaaatatgaaataaagtcaaattattttcatataag 33307652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 101 - 193
Target Start/End: Complemental strand, 52440794 - 52440702
Alignment:
Q  101 cttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagctattttgaaga 193  Q
    |||||||||| |||| || | |||||||  ||||||| || | |||||||||||| ||||||| ||| ||||||||||||  ||| |||||||    
T  52440794 cttatgtataggttacttttataacaaaatataaaatcaaatcaaattgttttcaaataagctataagctattttcataatttatcttgaaga 52440702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 37 - 184
Target Start/End: Original strand, 21574366 - 21574511
Alignment:
Q  37 taggtcttgtttgcattaaaaacttcatttagtacttatagcataaacacttgtcatataagggcttatgtatacgttatttctctaacaaacgataaaa 136  Q
    |||||| |||||| || ||  |||| ||| ||| ||||||| |||||| ||| |||| |||| | ||||||||  ||| ||| | || || | |||||||    
T  21574366 taggtcctgtttggataaactacttaattaagtgcttatagtataaacgcttctcatgtaagtgtttatgtatgagttgtttttata-cacaagataaaa 21574464  T
Q  137 taaagttaaattgttttcatataagctgtaaactattttcataagcta 184  Q
    |||||||||||||||| |||||||||| | |||| |||| ||||||||    
T  21574465 taaagttaaattgtttacatataagctat-aactttttttataagcta 21574511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 114 - 185
Target Start/End: Complemental strand, 24887402 - 24887331
Alignment:
Q  114 tatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagctat 185  Q
    ||||||| ||||||  ||||||||||||| ||| ||| ||||||||||||  || || ||||||||||||||    
T  24887402 tatttctataacaatagataaaataaagtcaaactgtattcatataagctaaaagctgttttcataagctat 24887331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 90 - 185
Target Start/End: Original strand, 27792799 - 27792894
Alignment:
Q  90 tcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagctat 185  Q
    ||||||||| ||||||||||| | ||||||   |||||| |||||||||| || ||| | ||||||||||||||| ||  | ||||||||| ||||    
T  27792799 tcatataagtgcttatgtataagctatttcaaaaacaaaagataaaataaggtcaaactattttcatataagctgcaagttgttttcataaactat 27792894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 73 - 168
Target Start/End: Original strand, 32703048 - 32703143
Alignment:
Q  73 tatagcataaacacttgtcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaa 168  Q
    |||||||||  || || ||||||||  | ||||||||| | ||||||| | | ||| ||||||||||| | |||||||||||||||||||| ||||    
T  32703048 tatagcatatccatttatcatataaatgtttatgtataagctatttctattataaaagataaaataaactcaaattgttttcatataagctataaa 32703143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 114 - 185
Target Start/End: Complemental strand, 36646501 - 36646430
Alignment:
Q  114 tatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagctat 185  Q
    ||||||| | ||||| |||||||||||||  ||||||||||||||||| | |||  | ||||||||||||||    
T  36646501 tatttctatgacaaaagataaaataaagtataattgttttcatataagttataacttgttttcataagctat 36646430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 114 - 177
Target Start/End: Complemental strand, 45433058 - 45432995
Alignment:
Q  114 tatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttca 177  Q
    ||||||| ||| ||| |||||||| |||||||||||||||||||| |||| |||| | ||||||    
T  45433058 tatttctataagaaaagataaaatgaagttaaattgttttcatatgagctataaattgttttca 45432995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 130 - 181
Target Start/End: Complemental strand, 48286913 - 48286862
Alignment:
Q  130 gataaaataaagttaaattgttttcatataagctgtaaactattttcataag 181  Q
    |||| |||||||||||||||||| |||||||| | |||||| ||||||||||    
T  48286913 gatagaataaagttaaattgtttccatataagttataaactgttttcataag 48286862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 70 - 163
Target Start/End: Complemental strand, 21862339 - 21862245
Alignment:
Q  70 acttatagcataaacacttgtcatataagggcttatgtatacgttatttctctaacaaacgataaaata-aagttaaattgttttcatataagct 163  Q
    |||||||||||||||  || || |||||| ||||  ||||| | | ||||| | ||||| ||||||||| |||| ||||||||||||||||||||    
T  21862339 acttatagcataaacgtttatcttataagtgcttgcgtataagctgtttctattacaaaagataaaatacaagtcaaattgttttcatataagct 21862245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 130 - 196
Target Start/End: Original strand, 23315593 - 23315659
Alignment:
Q  130 gataaaataaagttaaattgttttcatataagctgtaaactattttcataagctattttgaagagct 196  Q
    ||||||||||||| |||||||||||||||| ||| |||  | ||| ||||||||||| | |||||||    
T  23315593 gataaaataaagtcaaattgttttcatataggctataagatgtttccataagctattctaaagagct 23315659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 95 - 160
Target Start/End: Complemental strand, 20192744 - 20192679
Alignment:
Q  95 taagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataa 160  Q
    |||| ||||||||||| | ||||| | ||||||| ||||||||||||| |||  ||||||||||||    
T  20192744 taagtgcttatgtataagctatttatataacaaaagataaaataaagtcaaacagttttcatataa 20192679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 101 - 189
Target Start/End: Original strand, 23815991 - 23816076
Alignment:
Q  101 cttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagctattttg 189  Q
    |||||||||| ||||||||| ||| ||| |||||  |||||||||||||| ||| ||| ||||  || || ||||||||||||||||||    
T  23815991 cttatgtataagttatttctataataaaagataa--taaagttaaattgtattc-tatgagctagaagctgttttcataagctattttg 23816076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 159
Target Start/End: Original strand, 26990685 - 26990730
Alignment:
Q  114 tatttctctaacaaacgataaaataaagttaaattgttttcatata 159  Q
    ||||||| ||||||| ||||||||||||| ||||| ||||||||||    
T  26990685 tatttctataacaaaagataaaataaagtcaaattcttttcatata 26990730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 196
Target Start/End: Complemental strand, 33965602 - 33965526
Alignment:
Q  122 taacaaacgataaaataaagttaaattgttttcatat--aagctgtaaactattttcataagctattttgaagagct 196  Q
    ||||||| | ||||||||||| ||| |||||||||||  ||||| |||  | |||||||||||||| ||||||||||    
T  33965602 taacaaaaggtaaaataaagtcaaactgttttcatataaaagctataagatgttttcataagctatcttgaagagct 33965526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 187
Target Start/End: Original strand, 37788800 - 37788884
Alignment:
Q  102 ttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagctattt 187  Q
    ||||||||| ||||||| | ||||||| |||||||||||||  |||| ||||| ||||| || |||  | ||||||||||||||||    
T  37788800 ttatgtataagttattt-tataacaaaagataaaataaagtccaattattttcgtataatctataagttgttttcataagctattt 37788884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 183
Target Start/End: Complemental strand, 45264461 - 45264416
Alignment:
Q  138 aaagttaaattgttttcatataagctgtaaactattttcataagct 183  Q
    ||||||||||||||||| || ||||| ||| |||||||||||||||    
T  45264461 aaagttaaattgttttcttacaagctataagctattttcataagct 45264416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 154
Target Start/End: Complemental strand, 49772828 - 49772747
Alignment:
Q  73 tatagcataaacacttgtcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttc 154  Q
    ||||||||| |||||| ||||||||| | ||||||||| | ||||| | ||| |||  ||||||||||||  ||||||||||    
T  49772828 tatagcatagacacttatcatataagtgtttatgtataagctatttttgtaataaaaaataaaataaagtctaattgttttc 49772747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 133 - 185
Target Start/End: Complemental strand, 1217900 - 1217848
Alignment:
Q  133 aaaataaagttaaattgttttcatataagctgtaaactattttcataagctat 185  Q
    ||||| |||||||||||||||||| |||| | ||| || ||||||||||||||    
T  1217900 aaaatgaagttaaattgttttcatgtaagttataagctgttttcataagctat 1217848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 112 - 180
Target Start/End: Complemental strand, 23952227 - 23952159
Alignment:
Q  112 gttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataa 180  Q
    ||||||||| ||||||| |||||||| |||| ||| | ||||  |||||||||||| || |||||||||    
T  23952227 gttatttctataacaaaagataaaattaagtcaaagtatttttgtataagctgtaagctgttttcataa 23952159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 105 - 185
Target Start/End: Complemental strand, 24235811 - 24235731
Alignment:
Q  105 tgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagctat 185  Q
    |||||| ||||||||| ||||||| ||||| ||||||| ||| | |||  ||||||||| |||  | ||||||||||||||    
T  24235811 tgtataagttatttctataacaaaagataatataaagtcaaactatttgaatataagctataagttgttttcataagctat 24235731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 144 - 180
Target Start/End: Complemental strand, 33306812 - 33306776
Alignment:
Q  144 aaattgttttcatataagctgtaaactattttcataa 180  Q
    |||||||||||||||||||| ||| ||||||||||||    
T  33306812 aaattgttttcatataagctataagctattttcataa 33306776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 101 - 157
Target Start/End: Complemental strand, 40122884 - 40122828
Alignment:
Q  101 cttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcata 157  Q
    |||||||||| | ||||||  ||||||| ||||||||||||| ||| ||||||||||    
T  40122884 cttatgtataagctatttcaataacaaaagataaaataaagtcaaactgttttcata 40122828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 71 - 159
Target Start/End: Complemental strand, 51455939 - 51455852
Alignment:
Q  71 cttatagcataaacacttgtcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatata 159  Q
    |||||||||||||||||| | ||||  | | ||||||| |  |||||| | ||||||| ||||||||||||| |||||||| |||||||    
T  51455939 cttatagcataaacacttatgatattggtgtttatgtaaaaattattt-tataacaaaagataaaataaagtgaaattgttgtcatata 51455852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 52; Significance: 1e-20; HSPs: 63)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 70 - 185
Target Start/End: Original strand, 31884501 - 31884616
Alignment:
Q  70 acttatagcataaacacttgtcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaac 169  Q
    ||||||||||||| | ||| ||||| ||| || |||||||| ||||||||| |||||||  ||||||| || || ||||||||||||||||||| ||||     
T  31884501 acttatagcataagcgcttatcatacaagtgcatatgtataagttatttctataacaaaatataaaatcaaattgaattgttttcatataagctataaat 31884600  T
Q  170 tattttcataagctat 185  Q
    | ||||||||||||||    
T  31884601 tgttttcataagctat 31884616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 70 - 195
Target Start/End: Complemental strand, 787269 - 787144
Alignment:
Q  70 acttatagcataaacacttgtcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaac 169  Q
    ||||||||||||||   || |||| |||| |||||||| || | | ||||  ||||| | ||||||||||||| |||||||| ||||||||||| |||||    
T  787269 acttatagcataaatgtttatcatctaagtgcttatgtttaagctgtttccgtaacataagataaaataaagtcaaattgttatcatataagctataaac 787170  T
Q  170 tattttcataagctattttgaagagc 195  Q
    | |||||||||| ||| |||||||||    
T  787169 tgttttcataagttatcttgaagagc 787144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 39 - 185
Target Start/End: Original strand, 4558674 - 4558820
Alignment:
Q  39 ggtcttgtttgcattaaaaacttcatttagtacttatagcataaacacttgtcatataagggcttatgtatacgttatttctctaacaaacgataaaata 138  Q
    ||||||||||| || || ||||| |||  |  ||||||||||||||  || | || |||| | ||||||||| | ||||||| ||| ||| |||||||||    
T  4558674 ggtcttgtttggataaacaacttaattacgcgcttatagcataaacgtttattatgtaagtgtttatgtataagctatttctataataaaagataaaata 4558773  T
Q  139 aagttaaattgttttcatataagctgtaaactattttcataagctat 185  Q
    |||||||||| |||||||||| ||| ||| || ||| ||||||||||    
T  4558774 aagttaaattattttcatatatgctataagctgtttccataagctat 4558820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 72 - 194
Target Start/End: Complemental strand, 28769500 - 28769378
Alignment:
Q  72 ttatagcataaacacttgtcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaacta 171  Q
    |||||||||||   ||| ||||||||  ||||||||||| | |||| || |||||||| ||||||| |||| ||| | ||||| |||||||| ||| ||     
T  28769500 ttatagcataagtgcttatcatataaatgcttatgtataagctattcctataacaaactataaaattaagtcaaactattttcttataagctataagctg 28769401  T
Q  172 ttttcataagctattttgaagag 194  Q
    |||||||||||||||||| ||||    
T  28769400 ttttcataagctattttggagag 28769378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 76 - 163
Target Start/End: Complemental strand, 37444573 - 37444485
Alignment:
Q  76 agcataaacacttgtcat-ataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagct 163  Q
    ||||||| ||||| |||| ||||| ||||||||||| | |||| || ||||||| |||||| |||||||||||||||||| ||||||||    
T  37444573 agcataagcacttatcatgataagcgcttatgtataagctattactataacaaaagataaagtaaagttaaattgttttcgtataagct 37444485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 93 - 189
Target Start/End: Original strand, 38874576 - 38874672
Alignment:
Q  93 tataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagctattttg 189  Q
    |||||| | ||||||||| ||| ||||| |||| || ||||||||  ||| ||||| |||||||||||||| ||| || ||||||||||||||||||    
T  38874576 tataagtgtttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttg 38874672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 100 - 163
Target Start/End: Original strand, 1112790 - 1112853
Alignment:
Q  100 gcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagct 163  Q
    ||||||||||| | ||||||| ||||||| |||||||||| ||||||||||||||| |||||||    
T  1112790 gcttatgtatatgctatttctataacaaaagataaaataaggttaaattgttttcacataagct 1112853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 71 - 142
Target Start/End: Original strand, 34563158 - 34563229
Alignment:
Q  71 cttatagcataaacacttgtcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagt 142  Q
    ||||||||||||||| || ||||||||| |||||| |||| ||||||||| | ||||| |||||||||||||    
T  34563158 cttatagcataaacatttatcatataagtgcttatatataagttatttctatgacaaaggataaaataaagt 34563229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 71 - 161
Target Start/End: Original strand, 29699162 - 29699252
Alignment:
Q  71 cttatagcataaacacttgtcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataag 161  Q
    ||||||||||||| | || ||||||||  ||||||||| | ||||||||| ||||||| ||||||||||||| ||| |||| |||| ||||    
T  29699162 cttatagcataaatatttatcatataaatgcttatgtacaagttatttctataacaaaagataaaataaagtcaaaatgttgtcatctaag 29699252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 76 - 161
Target Start/End: Original strand, 7026644 - 7026729
Alignment:
Q  76 agcataaacacttgtcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataag 161  Q
    |||||||||| || ||||||||| ||||||| ||| | || |  | ||||||| ||||||||||||| ||||||||||||||||||    
T  7026644 agcataaacatttatcatataagtgcttatgcataagctactgttataacaaaagataaaataaagtaaaattgttttcatataag 7026729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 101 - 186
Target Start/End: Original strand, 12361130 - 12361215
Alignment:
Q  101 cttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagctatt 186  Q
    ||||| |||| ||||||||| |||  || |||||||| |||| |||||||||||||||||||| ||| || |||||||||| ||||    
T  12361130 cttatatataagttatttctataaataaagataaaatgaagtcaaattgttttcatataagctataagctgttttcataagttatt 12361215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 122 - 163
Target Start/End: Complemental strand, 42237533 - 42237492
Alignment:
Q  122 taacaaacgataaaataaagttaaattgttttcatataagct 163  Q
    ||||||| ||||||||||||||||||||||||||||||||||    
T  42237533 taacaaaagataaaataaagttaaattgttttcatataagct 42237492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 101 - 182
Target Start/End: Original strand, 42597339 - 42597420
Alignment:
Q  101 cttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagc 182  Q
    |||||||||| | ||||||| ||||||| ||||||||||||| |||||||||||||  ||||| |||  | |||||||||||    
T  42597339 cttatgtataagctatttctataacaaaagataaaataaagtaaaattgttttcatgcaagctataagttgttttcataagc 42597420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 101 - 189
Target Start/End: Original strand, 7514516 - 7514604
Alignment:
Q  101 cttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagctattttg 189  Q
    |||||||||| | ||||||| || ||||   |||||||| ||| |||||||||||||||||||  || || ||||||||||||||||||    
T  7514516 cttatgtataagctatttctatagcaaaaactaaaataatgttcaattgttttcatataagctacaagctgttttcataagctattttg 7514604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 38 - 142
Target Start/End: Complemental strand, 11119194 - 11119090
Alignment:
Q  38 aggtcttgtttgcattaaaaacttcatttagtacttatagcataaacacttgtcatataagggcttatgtatacgttatttctctaacaaacgataaaat 137  Q
    |||| ||||||| || || ||||| ||| |||  |||||||||||  || | ||||||||  ||||||||||||| ||||||| ||||||| ||||||||    
T  11119194 aggttttgtttggataaacaacttgattaagtgtttatagcataactacatatcatataatcgcttatgtatacgatatttctataacaaaagataaaat 11119095  T
Q  138 aaagt 142  Q
    |||||    
T  11119094 aaagt 11119090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 101 - 184
Target Start/End: Original strand, 3936787 - 3936870
Alignment:
Q  101 cttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagcta 184  Q
    ||||||||||   ||||||| ||||||| |||||||||||| |||||||| ||| |||||||| ||| || ||||| |||||||    
T  3936787 cttatgtataatctatttctataacaaaggataaaataaagctaaattgtcttcctataagctataagctgttttcgtaagcta 3936870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 95 - 206
Target Start/End: Complemental strand, 12225037 - 12224926
Alignment:
Q  95 taagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagctattttgaagag 194  Q
    |||| ||||||||||| |||||||||   ||||| ||||||||||||| ||| | |||||||||  | | ||| ||| |||||||||| ||  |||||||    
T  12225037 taagagcttatgtataagttatttctaagacaaaagataaaataaagtcaaactattttcatatggggtataagctactttcataagccatcctgaagag 12224938  T
Q  195 ctcagaaaaata 206  Q
    |||| |||||||    
T  12224937 ctcataaaaata 12224926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 90 - 153
Target Start/End: Original strand, 14482129 - 14482192
Alignment:
Q  90 tcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgtttt 153  Q
    ||||||||| |||||||||||   ||||||| ||||||| ||||||||||||| ||||||||||    
T  14482129 tcatataagtgcttatgtataaactatttctataacaaaagataaaataaagtcaaattgtttt 14482192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 130 - 185
Target Start/End: Complemental strand, 28784898 - 28784843
Alignment:
Q  130 gataaaataaagttaaattgttttcatataagctgtaaactattttcataagctat 185  Q
    ||||||||||||| |||||||||| |||| || ||||| |||||||||||||||||    
T  28784898 gataaaataaagtcaaattgttttgatatcagttgtaagctattttcataagctat 28784843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 130 - 181
Target Start/End: Complemental strand, 35374476 - 35374425
Alignment:
Q  130 gataaaataaagttaaattgttttcatataagctgtaaactattttcataag 181  Q
    |||||||||||||||||||||||||||||||||| ||| ||  |||||||||    
T  35374476 gataaaataaagttaaattgttttcatataagctataatctgatttcataag 35374425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 71 - 186
Target Start/End: Original strand, 35869745 - 35869860
Alignment:
Q  71 cttatagcataaacacttgtcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaact 170  Q
    |||||||||||| ||||| |||||||||  |||||||||| |  ||||||  ||||||  |||||||||| | |||   |||||||||||||| |||  |    
T  35869745 cttatagcataagcacttatcatataagttcttatgtataagcgatttctacaacaaaatataaaataaattcaaacaattttcatataagctataagtt 35869844  T
Q  171 attttcataagctatt 186  Q
     |||||||||||||||    
T  35869845 gttttcataagctatt 35869860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 90 - 157
Target Start/End: Complemental strand, 40280348 - 40280281
Alignment:
Q  90 tcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcata 157  Q
    ||||||||| || ||| |||| |||||||||  |||||| ||||||||||||| ||||||||||||||    
T  40280348 tcatataagtgcctatatataagttatttctacaacaaaagataaaataaagtaaaattgttttcata 40280281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 180
Target Start/End: Original strand, 8909009 - 8909067
Alignment:
Q  122 taacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataa 180  Q
    ||||||| |||| |||| |||||||||||||||||||||||| |||||  |||||||||    
T  8909009 taacaaaagatataatatagttaaattgttttcatataagctataaacagttttcataa 8909067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 91 - 185
Target Start/End: Complemental strand, 11188297 - 11188203
Alignment:
Q  91 catataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagctat 185  Q
    |||||||| ||||||||||| ||| ||||| ||||||| |||||||||||   ||| | |||| |||| || | ||||||||||| |||||||||    
T  11188297 catataagtgcttatgtataagttgtttctataacaaaagataaaataaaaccaaactatttttatattagttataaactattttgataagctat 11188203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 71 - 177
Target Start/End: Original strand, 12972764 - 12972870
Alignment:
Q  71 cttatagcataaacacttgtcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaact 170  Q
    |||||||||||| || || ||||||||| ||||||||||| | ||||||  ||||| | ||| ||||||| ||||| || |||||| |||||| |||  |    
T  12972764 cttatagcataagcatttatcatataagtgcttatgtataagctatttcaataacagaagatgaaataaaattaaactggtttcatgtaagctataagtt 12972863  T
Q  171 attttca 177  Q
    |||||||    
T  12972864 attttca 12972870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 90 - 196
Target Start/End: Original strand, 13652142 - 13652248
Alignment:
Q  90 tcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagctattttg 189  Q
    |||| |||| ||||||||||| | ||||||| || |||| |||  ||| |||| |||||||||||||||||| | |||| | |||| |||||||||| ||    
T  13652142 tcatctaagtgcttatgtataagctatttctatagcaaaagatggaatgaagtgaaattgttttcatataagttataaattgtttttataagctattctg 13652241  T
Q  190 aagagct 196  Q
     ||||||    
T  13652242 gagagct 13652248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 90 - 196
Target Start/End: Original strand, 13710785 - 13710891
Alignment:
Q  90 tcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagctattttg 189  Q
    |||| |||| ||||||||||| | ||||||| || |||| |||  ||| |||| |||||||||||||||||| | |||| | |||| |||||||||| ||    
T  13710785 tcatctaagtgcttatgtataagctatttctatagcaaaagatggaatgaagtgaaattgttttcatataagttataaattgtttttataagctattctg 13710884  T
Q  190 aagagct 196  Q
     ||||||    
T  13710885 gagagct 13710891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 94 - 160
Target Start/End: Original strand, 26215427 - 26215493
Alignment:
Q  94 ataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataa 160  Q
    ||||| ||||||||||| | ||||||| ||||||| ||||||||||||||||| | ||||| |||||    
T  26215427 ataagcgcttatgtataagctatttctataacaaaagataaaataaagttaaactattttcgtataa 26215493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 113 - 187
Target Start/End: Original strand, 27049318 - 27049391
Alignment:
Q  113 ttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagctattt 187  Q
    |||||||| || |||| |||||| ||||||| |||| ||||| |||||||| |||||| ||||||||||||||||    
T  27049318 ttatttctatagcaaaagataaa-taaagttcaattattttcgtataagctataaacttttttcataagctattt 27049391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 104 - 185
Target Start/End: Complemental strand, 1470985 - 1470904
Alignment:
Q  104 atgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagctat 185  Q
    ||||||| | ||||||| ||| ||| ||||||||||||| |||||  ||||||||||||| ||| || ||||||||| ||||    
T  1470985 atgtataagctatttctataataaaagataaaataaagtcaaattactttcatataagctataagctgttttcataacctat 1470904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 102 - 183
Target Start/End: Original strand, 7646145 - 7646226
Alignment:
Q  102 ttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagct 183  Q
    ||||||||| | ||||||| ||| ||| | ||||||||||||||||||||||  ||||| || |||||| | ||||||||||    
T  7646145 ttatgtataagctatttctataagaaaaggtaaaataaagttaaattgtttttgtataatctataaactgtcttcataagct 7646226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 44 - 159
Target Start/End: Complemental strand, 8536237 - 8536123
Alignment:
Q  44 tgtttgcattaaaaacttcatttagtacttatagcataaacacttgtcatataagggcttatgtatacgttatttctctaacaaacgataaaa-taaagt 142  Q
    |||||| || || ||||| ||| ||| |||||| ||| ||  ||||||||||||| ||||||||||| | ||||||| |||||||  |||||| | ||||    
T  8536237 tgtttggataaacaacttaattgagtgcttataccatgaatgcttgtcatataagtgcttatgtataagctatttctataacaaa--ataaaagtgaagt 8536140  T
Q  143 taaattgttttcatata 159  Q
     ||||||||||||||||    
T  8536139 caaattgttttcatata 8536123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 75 - 196
Target Start/End: Complemental strand, 11813263 - 11813142
Alignment:
Q  75 tagcataaacacttgtcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattt 174  Q
    |||||||||| ||| ||||||||| ||||||||| | | |||||||||||  ||  ||||||||||   ||| ||||| |||||||  | ||| || |||    
T  11813263 tagcataaacgcttatcatataagtgcttatgtacaagatatttctctaaacaaatataaaataaaagaaaactgtttccatataatttataatctgttt 11813164  T
Q  175 tcataagctattttgaagagct 196  Q
    ||||||||||| || |||||||    
T  11813163 tcataagctatcttcaagagct 11813142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 94 - 163
Target Start/End: Complemental strand, 14280540 - 14280471
Alignment:
Q  94 ataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagct 163  Q
    ||||| |||||||||||   ||||||| || |||| |||||||| || ||||||||||||||||||||||    
T  14280540 ataagcgcttatgtataacctatttctatagcaaaagataaaattaaattaaattgttttcatataagct 14280471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 104 - 153
Target Start/End: Original strand, 32976358 - 32976407
Alignment:
Q  104 atgtatacgttatttctctaacaaacgataaaataaagttaaattgtttt 153  Q
    ||||||||| ||||||| ||||||| |||||||||||||||||| |||||    
T  32976358 atgtatacgctatttctataacaaaagataaaataaagttaaatagtttt 32976407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 124 - 185
Target Start/End: Original strand, 34770853 - 34770914
Alignment:
Q  124 acaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagctat 185  Q
    ||||| ||||||||||||| ||||||||||||| |||||| |||  | ||||||||||||||    
T  34770853 acaaaagataaaataaagtcaaattgttttcatttaagctataagttgttttcataagctat 34770914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 130 - 182
Target Start/End: Original strand, 778356 - 778408
Alignment:
Q  130 gataaaataaagttaaattgttttcatataagctgtaaactattttcataagc 182  Q
    ||||||||||||||||||||||||||| | |||| ||| || |||||||||||    
T  778356 gataaaataaagttaaattgttttcattttagctataagctgttttcataagc 778408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 154
Target Start/End: Original strand, 21653012 - 21653072
Alignment:
Q  94 ataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttc 154  Q
    ||||| ||||||||||| | ||||| | ||||||| |||||||||||||||||||| ||||    
T  21653012 ataagcgcttatgtataggctatttatgtaacaaaagataaaataaagttaaattgatttc 21653072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 72 - 196
Target Start/End: Complemental strand, 29056151 - 29056028
Alignment:
Q  72 ttatagcataaacacttgtcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaacta 171  Q
    ||||||||||||  ||||||| | ||| | ||||||||| | || ||||  | |||| ||||||||||||| || ||||||||||||||| |   |||||    
T  29056151 ttatagcataaag-cttgtcaaacaagtgtttatgtataagctacttctagagcaaaagataaaataaagtcaatttgttttcatataagttagtaacta 29056053  T
Q  172 ttttcataagctattttgaagagct 196  Q
    ||||||||| ||||| | |||||||    
T  29056052 ttttcataacctattctcaagagct 29056028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 70 - 185
Target Start/End: Complemental strand, 44617950 - 44617837
Alignment:
Q  70 acttatagcataaacacttgtcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaac 169  Q
    ||||||||| ||||||||||| ||||||  | ||||||||| | ||||||| |||| ||  |||||||  ||||| | |||||||||||||| | || ||    
T  44617950 acttatagcttaaacacttgttatataacagtttatgtataagctatttctataactaaaaataaaat--agttagactgttttcatataagatatagac 44617853  T
Q  170 tattttcataagctat 185  Q
    |||||| | |||||||    
T  44617852 tatttttagaagctat 44617837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 130 - 185
Target Start/End: Complemental strand, 6509406 - 6509351
Alignment:
Q  130 gataaaataaagttaaattgttttcatataagctgtaaactattttcataagctat 185  Q
    ||||||||||||| ||||||| || ||||||||| ||| || ||||||||||||||    
T  6509406 gataaaataaagtcaaattgtatttatataagctataagctgttttcataagctat 6509351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 94 - 185
Target Start/End: Original strand, 10114421 - 10114511
Alignment:
Q  94 ataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagctat 185  Q
    ||||| ||||||||||| | ||||||| || |||| |||||||| ||||| |||||||||  |||||||| ||| || ||||||| ||||||    
T  10114421 ataagtgcttatgtataagctatttctatagcaaaagataaaat-aagttgaattgttttggtataagctataagctgttttcattagctat 10114511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 104 - 163
Target Start/End: Complemental strand, 16211015 - 16210956
Alignment:
Q  104 atgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagct 163  Q
    ||||||| | ||||||| ||  ||| ||||||||||||||| ||||||||||||||||||    
T  16211015 atgtataagctatttctatagtaaatgataaaataaagttacattgttttcatataagct 16210956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 114 - 157
Target Start/End: Complemental strand, 27120027 - 27119984
Alignment:
Q  114 tatttctctaacaaacgataaaataaagttaaattgttttcata 157  Q
    ||||||| ||||||||||||| ||||||||||| ||||||||||    
T  27120027 tatttctataacaaacgataacataaagttaaactgttttcata 27119984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 94 - 153
Target Start/End: Complemental strand, 37153029 - 37152970
Alignment:
Q  94 ataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgtttt 153  Q
    ||||| |||||||||||   ||||||| |||||||  |||||||||||||||||||||||    
T  37153029 ataagcgcttatgtataatatatttctataacaaagtataaaataaagttaaattgtttt 37152970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 122 - 161
Target Start/End: Original strand, 44168517 - 44168556
Alignment:
Q  122 taacaaacgataaaataaagttaaattgttttcatataag 161  Q
    ||||||| |||||||||||||||| |||||||||||||||    
T  44168517 taacaaaagataaaataaagttaatttgttttcatataag 44168556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 90 - 152
Target Start/End: Complemental strand, 30628045 - 30627983
Alignment:
Q  90 tcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttt 152  Q
    |||||||||||| | |||||| | ||||||| ||||||| ||||||||||| | |||||||||    
T  30628045 tcatataagggcatttgtataagctatttctgtaacaaaagataaaataaaataaaattgttt 30627983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 80 - 142
Target Start/End: Original strand, 40356788 - 40356850
Alignment:
Q  80 taaacacttgtcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagt 142  Q
    ||||||||||||||||||| |||||| |||| | ||||| | ||| ||| |||||||||||||    
T  40356788 taaacacttgtcatataagtgcttatctataagctatttatataataaaagataaaataaagt 40356850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 196
Target Start/End: Complemental strand, 7918875 - 7918810
Alignment:
Q  131 ataaaataaagttaaattgttttcatataagctgtaaactattttcataagctattttgaagagct 196  Q
    |||||||||||||||||| ||||| | |||||| |||  | |||||||||||||| ||| ||||||    
T  7918875 ataaaataaagttaaatttttttcttgtaagctataagttgttttcataagctatcttgtagagct 7918810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 153
Target Start/End: Complemental strand, 26716596 - 26716518
Alignment:
Q  73 tatagcataaacacttgtcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgtttt 153  Q
    |||||||||||||||| | ||||||| ||||||||||| | || |||| ||||||  ||| ||||||||| ||||| ||||    
T  26716596 tatagcataaacacttattatataagtgcttatgtataagctacttctataacaa--gattaaataaagtcaaattatttt 26716518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 167
Target Start/End: Complemental strand, 29262977 - 29262940
Alignment:
Q  130 gataaaataaagttaaattgttttcatataagctgtaa 167  Q
    ||||||||||||| ||||| ||||||||||||||||||    
T  29262977 gataaaataaagtcaaattattttcatataagctgtaa 29262940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 161
Target Start/End: Complemental strand, 35453784 - 35453695
Alignment:
Q  72 ttatagcataaacacttgtcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataag 161  Q
    ||||||||||| | |||||||||||||  ||||| ||||   | |||||  |||||| ||||||||||||||||| |  |||||||||||    
T  35453784 ttatagcataagcgcttgtcatataagtacttatatataatctgtttctacaacaaaagataaaataaagttaaactagtttcatataag 35453695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 159
Target Start/End: Complemental strand, 41620434 - 41620365
Alignment:
Q  90 tcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatata 159  Q
    ||||| ||| |||||| |||| ||||||| | ||||||| ||||||||||||| ||||| | ||||||||    
T  41620434 tcatacaagtgcttatatataagttatttttgtaacaaaagataaaataaagtcaaattatgttcatata 41620365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 130 - 178
Target Start/End: Original strand, 773296 - 773344
Alignment:
Q  130 gataaaataaagttaaattgttttcatataagctgtaaactattttcat 178  Q
    ||||||||||||||||||||||||||| | |||| ||| || |||||||    
T  773296 gataaaataaagttaaattgttttcattttagctataagctgttttcat 773344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 130 - 178
Target Start/End: Original strand, 787790 - 787838
Alignment:
Q  130 gataaaataaagttaaattgttttcatataagctgtaaactattttcat 178  Q
    ||||||||||||||||||||||||||| | |||| ||| || |||||||    
T  787790 gataaaataaagttaaattgttttcattttagctataagctgttttcat 787838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 115 - 163
Target Start/End: Complemental strand, 3537149 - 3537101
Alignment:
Q  115 atttctctaacaaacgataaaataaagttaaattgttttcatataagct 163  Q
    |||||| || |||| ||||||||||||| ||||||||||| ||||||||    
T  3537149 atttctatagcaaaagataaaataaagtcaaattgttttcgtataagct 3537101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 70 - 185
Target Start/End: Original strand, 8062430 - 8062546
Alignment:
Q  70 acttatagcataaacacttgtcatataagggcttatgtatacgttatttctctaacaaacgataaaataaa-gttaaattgttttcatataagctgtaaa 168  Q
    ||||||||||||| || || |||||||||   |||| |||| | ||||||  |||| || ||||||| ||| || |||||||||||||||||||| |||     
T  8062430 acttatagcataagcatttatcatataagcatttatctataagctatttcaataaccaatgataaaaaaaaagtcaaattgttttcatataagctataag 8062529  T
Q  169 ctattttcataagctat 185  Q
     | || |||||||||||    
T  8062530 atgttctcataagctat 8062546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 137 - 185
Target Start/End: Original strand, 29342259 - 29342307
Alignment:
Q  137 taaagttaaattgttttcatataagctgtaaactattttcataagctat 185  Q
    |||||||||||| |||||||||||| |  ||| ||||||||||||||||    
T  29342259 taaagttaaattattttcatataagttacaaattattttcataagctat 29342307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 139 - 195
Target Start/End: Complemental strand, 30043840 - 30043784
Alignment:
Q  139 aagttaaattgttttcatataagctgtaaactattttcataagctattttgaagagc 195  Q
    ||||||||||| ||||||||| ||| ||| || ||||||||||||||  ||||||||    
T  30043840 aagttaaattgctttcatatatgctataagctgttttcataagctatactgaagagc 30043784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 130 - 186
Target Start/End: Complemental strand, 33209323 - 33209267
Alignment:
Q  130 gataaaataaagttaaattgttttcatataagctgtaaactattttcataagctatt 186  Q
    |||||||||||||  || ||||||||||||| || ||| ||||||| ||||||||||    
T  33209323 gataaaataaagtcgaactgttttcatataaactataagctatttttataagctatt 33209267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 90 - 185
Target Start/End: Complemental strand, 35298621 - 35298525
Alignment:
Q  90 tcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttc-atataagctgtaaactattttcataagctat 185  Q
    ||||||||| ||||||||||| | ||||||  ||||||| ||||||||||||  |||  |||||| |||||| || |||  | ||||||||||||||    
T  35298621 tcatataagtgcttatgtataagctatttcagtaacaaaagataaaataaagccaaacagttttcaatataaactataagttgttttcataagctat 35298525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 81 - 160
Target Start/End: Complemental strand, 41475213 - 41475133
Alignment:
Q  81 aaacacttgtcat-ataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataa 160  Q
    ||||||||||||| |||||  |||||||||| | || || | || |||| ||||||||| ||||||||||||||| |||||    
T  41475213 aaacacttgtcatgataagcacttatgtataagctaattttatagcaaaagataaaatacagttaaattgttttcgtataa 41475133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 132 - 196
Target Start/End: Complemental strand, 42215182 - 42215119
Alignment:
Q  132 taaaataaagttaaattgttttcatataagctgtaaactattttcataagctattttgaagagct 196  Q
    ||||||||||| ||||||||||| ||| | || |||| |||||||||||||||| ||| ||||||    
T  42215182 taaaataaagtcaaattgttttcgtatcatctataaa-tattttcataagctatcttggagagct 42215119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 51; Significance: 4e-20; HSPs: 3)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 71 - 185
Target Start/End: Original strand, 27484 - 27598
Alignment:
Q  71 cttatagcataaacacttgtcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaact 170  Q
    |||||||||||| | ||| |||| |||| ||||||||||| ||||||||| ||||| | ||||||||||||| ||||||||||||||||| || |||  |    
T  27484 cttatagcataagctcttatcatgtaagtgcttatgtataagttatttctataacagaagataaaataaagtcaaattgttttcatataaactataagtt 27583  T
Q  171 attttcataagctat 185  Q
     ||||||||| ||||    
T  27584 gttttcataaactat 27598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 101 - 165
Target Start/End: Complemental strand, 21410 - 21346
Alignment:
Q  101 cttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgt 165  Q
    |||||||||| | ||||| | ||  ||| ||||||||||||||||||||||||| ||||||||||    
T  21410 cttatgtataagctatttttataggaaaagataaaataaagttaaattgttttcgtataagctgt 21346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 165
Target Start/End: Original strand, 58906 - 58939
Alignment:
Q  132 taaaataaagttaaattgttttcatataagctgt 165  Q
    ||||||||||||||||||||||| ||||||||||    
T  58906 taaaataaagttaaattgttttcgtataagctgt 58939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 51; Significance: 4e-20; HSPs: 57)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 71 - 161
Target Start/End: Complemental strand, 8349826 - 8349736
Alignment:
Q  71 cttatagcataaacacttgtcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataag 161  Q
    |||||||||||| ||||| ||||||||| | || ||||||   ||||||||||||||| |||||||||||||||||||||||| |||||||    
T  8349826 cttatagcataaccacttatcatataagtgtttgtgtataaactatttctctaacaaaagataaaataaagttaaattgtttttatataag 8349736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 100 - 186
Target Start/End: Complemental strand, 29274362 - 29274276
Alignment:
Q  100 gcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagctatt 186  Q
    ||||||||||| | ||||||| || |||| ||||||||||||| |||||||||||||||||||| |||||| |||||||||| ||||    
T  29274362 gcttatgtataagctatttctatagcaaaagataaaataaagtcaaattgttttcatataagctataaactgttttcataagatatt 29274276  T

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Target: chr6; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 94 - 183
Target Start/End: Complemental strand, 9093695 - 9093606
Alignment:
Q  94 ataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagct 183  Q
    ||||| ||||||| ||| | ||||||| || |||| ||||||||||||||||||||||||| |||||||| ||| || ||||||||||||    
T  9093695 ataagcgcttatggataagctatttctatatcaaaagataaaataaagttaaattgttttcgtataagctataagctgttttcataagct 9093606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 114 - 185
Target Start/End: Original strand, 1402947 - 1403018
Alignment:
Q  114 tatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagctat 185  Q
    ||||||| ||||||| ||||||||||||||||| | |||||||||||||| |||| | ||||||||||||||    
T  1402947 tatttctataacaaaagataaaataaagttaaactattttcatataagctataaattgttttcataagctat 1403018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 94 - 185
Target Start/End: Original strand, 4006645 - 4006736
Alignment:
Q  94 ataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagctat 185  Q
    ||||| ||||||| ||| | ||||||| ||||||| ||||||||||||| |||||||||| ||||||||| |||  | ||||||||||||||    
T  4006645 ataagtgcttatgcataagatatttctataacaaatgataaaataaagtcaaattgtttttatataagctataagttgttttcataagctat 4006736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 37 - 163
Target Start/End: Original strand, 7713899 - 7714025
Alignment:
Q  37 taggtcttgtttgcattaaaaacttcatttagtacttatagcataaacacttgtcatataagggcttatgtatacgttatttctctaacaaacgataaaa 136  Q
    |||| |||||||| || || ||||| |||  || |||||||||||| ||| | ||||||||| |||||||||||   || ||   ||||||| |||||||    
T  7713899 taggccttgtttggataaagaacttaattacgtgcttatagcataaccacctatcatataagagcttatgtataaactactttcataacaaaagataaaa 7713998  T
Q  137 taaagttaaattgttttcatataagct 163  Q
    |||||| ||||||||||||||||||||    
T  7713999 taaagtcaaattgttttcatataagct 7714025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 75 - 181
Target Start/End: Original strand, 22742278 - 22742384
Alignment:
Q  75 tagcataaacacttgtcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattt 174  Q
    |||||||| | ||| || ||||||  ||||| |||| | ||||| | ||||||| ||||||||||||| |||||||||||||||||||| ||| ||||||    
T  22742278 tagcataagcgcttatcgtataagttcttatctataagctatttgtataacaaaggataaaataaagtcaaattgttttcatataagctataagctattt 22742377  T
Q  175 tcataag 181  Q
    | |||||    
T  22742378 ttataag 22742384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 71 - 179
Target Start/End: Original strand, 5550040 - 5550148
Alignment:
Q  71 cttatagcataaacacttgtcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaact 170  Q
    |||||||||||| | || |||||||||| |||||||||||   ||||||  ||| ||  ||||| ||||||| |||||||||||||||||||| ||| ||    
T  5550040 cttatagcataagcgctggtcatataagtgcttatgtatatagtatttcgataataagagataacataaagtcaaattgttttcatataagctataagct 5550139  T
Q  171 attttcata 179  Q
     ||||||||    
T  5550140 gttttcata 5550148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 71 - 194
Target Start/End: Original strand, 2206498 - 2206621
Alignment:
Q  71 cttatagcataaacacttgtcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaact 170  Q
    |||||||||||| | ||| || ||||||   || |||||| ||||||| | ||||||| |||||||||||||  ||||||||| ||||||||| | ||||    
T  2206498 cttatagcataagctcttatcgtataagcatttctgtataagttatttttataacaaaagataaaataaagtataattgtttttatataagctatgaact 2206597  T
Q  171 attttcataagctattttgaagag 194  Q
     ||| |||||||||| ||| ||||    
T  2206598 gtttacataagctatcttggagag 2206621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 71 - 153
Target Start/End: Original strand, 6654522 - 6654605
Alignment:
Q  71 cttatagcataaacacttgtca-tataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgtttt 153  Q
    |||||||||| ||| ||| ||| |||||||||||||||||| ||||||||| |||||||  ||||||| |||| ||||||||||    
T  6654522 cttatagcattaacgcttatcaatataagggcttatgtataagttatttctataacaaataataaaattaagtcaaattgtttt 6654605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 72 - 163
Target Start/End: Complemental strand, 7351769 - 7351678
Alignment:
Q  72 ttatagcataaacacttgtcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagct 163  Q
    ||||||||||| | ||| ||||||||  |||||||||||   ||||| | ||| |||| |||||||||||||||| ||||||||||||||||    
T  7351769 ttatagcataagctcttatcatataaatgcttatgtataaactatttatataataaactataaaataaagttaaactgttttcatataagct 7351678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 91 - 194
Target Start/End: Complemental strand, 11340767 - 11340664
Alignment:
Q  91 catataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagctattttga 190  Q
    |||||||| |||||| |||| | || |||| ||||||| |||||||||||||||| || |||||||||| ||| |||  |  |||||||||||||||| |    
T  11340767 catataagtgcttatatataagataattctataacaaaagataaaataaagttaatttattttcatatacgctataagttggtttcataagctattttta 11340668  T
Q  191 agag 194  Q
    ||||    
T  11340667 agag 11340664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 59 - 149
Target Start/End: Original strand, 4248854 - 4248944
Alignment:
Q  59 cttcatttagtacttatagcataaacacttgtcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattg 149  Q
    ||||||| || |||| |||||||| | ||||||||||||| |||||| |||| | ||||||  ||||||| ||||||||||||| ||||||    
T  4248854 cttcattgagcacttctagcataagcgcttgtcatataagtgcttatatataagctatttcaataacaaaagataaaataaagtcaaattg 4248944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 102 - 160
Target Start/End: Complemental strand, 24836330 - 24836272
Alignment:
Q  102 ttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataa 160  Q
    ||||||||| ||||||||| ||||||| ||||||||||||| ||||||||||| |||||    
T  24836330 ttatgtataagttatttctataacaaaagataaaataaagtcaaattgttttcgtataa 24836272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 94 - 191
Target Start/End: Complemental strand, 9559680 - 9559584
Alignment:
Q  94 ataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagctattttgaa 191  Q
    ||||| ||||||||||| ||||||||| || |||| ||||||||||| ||||||||||||| || || ||  ||||| |||||| ||||||| |||||    
T  9559680 ataagcgcttatgtataagttatttctatagcaaaagataaaataaatttaaattgttttcgtagaaactacaaactgttttca-aagctatcttgaa 9559584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 72 - 185
Target Start/End: Original strand, 32975887 - 32976000
Alignment:
Q  72 ttatagcataaacacttgtcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaacta 171  Q
    ||||||||||| | ||| ||||||||| | ||||||||| ||||||||| |||||||  |||||||||||| ||| |||||  ||| ||||  |||  |     
T  32975887 ttatagcataagcgcttctcatataagtgtttatgtataagttatttctgtaacaaaatataaaataaagtcaaactgtttcaatagaagcaataagttg 32975986  T
Q  172 ttttcataagctat 185  Q
    ||||||||||||||    
T  32975987 ttttcataagctat 32976000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 71 - 183
Target Start/End: Original strand, 2514610 - 2514722
Alignment:
Q  71 cttatagcataaacacttgtcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaact 170  Q
    |||||||||||||  ||| |||| |||| ||||||||||| | ||||||| ||| ||| ||||||||||||| ||| |  ||| |||| |||| |||  |    
T  2514610 cttatagcataaatgcttatcatgtaagtgcttatgtataagctatttctataataaaagataaaataaagtcaaactaattttatatgagctataagtt 2514709  T
Q  171 attttcataagct 183  Q
    |||||||||||||    
T  2514710 attttcataagct 2514722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 93 - 185
Target Start/End: Complemental strand, 20672005 - 20671913
Alignment:
Q  93 tataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagctat 185  Q
    |||||| | ||||||||| | |||||||  | |||| ||||||||||||| ||||||||||| |||||||| |||| | ||||||||| ||||    
T  20672005 tataagtgattatgtataagctatttctagatcaaaagataaaataaagtcaaattgttttcgtataagctttaaattgttttcataaactat 20671913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 72 - 183
Target Start/End: Complemental strand, 33068722 - 33068610
Alignment:
Q  72 ttatagcataaacacttgtcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaacta 171  Q
    ||||||||||| | ||| ||| ||||  ||||||||||| ||||||||| ||||||| ||||||||||  | ||| |||||||| ||||| | ||| |||    
T  33068722 ttatagcataagcgcttatcaaataaatgcttatgtataagttatttctataacaaaagataaaataatatcaaactgttttcaaataagatataagcta 33068623  T
Q  172 -ttttcataagct 183  Q
     ||||||||||||    
T  33068622 tttttcataagct 33068610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 122 - 185
Target Start/End: Complemental strand, 281959 - 281896
Alignment:
Q  122 taacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagctat 185  Q
    ||||||| ||||||||||||| || ||||||||||||||||| ||| || | ||||||||||||    
T  281959 taacaaaagataaaataaagtcaacttgttttcatataagctataagctgtgttcataagctat 281896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 100 - 163
Target Start/End: Original strand, 507157 - 507220
Alignment:
Q  100 gcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagct 163  Q
    |||||||||||  |||||||| ||||||| ||||||||||||||| ||||||||  ||||||||    
T  507157 gcttatgtataaattatttctataacaaaagataaaataaagttagattgtttttgtataagct 507220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 90 - 185
Target Start/End: Original strand, 10016472 - 10016567
Alignment:
Q  90 tcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagctat 185  Q
    |||||||||  |||||||||| | |||||||  | |||| ||||||||||| ||||| |||| ||||||||||  ||| || ||||||||||||||    
T  10016472 tcatataagtccttatgtataagctatttctaaaccaaaagataaaataaatttaaactgttctcatataagccataagctgttttcataagctat 10016567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 90 - 165
Target Start/End: Complemental strand, 32386242 - 32386167
Alignment:
Q  90 tcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgt 165  Q
    ||||||||| ||||||||||| | |||||| || | ||| ||||||||||||| ||| |||||| |||||||||||    
T  32386242 tcatataagtgcttatgtataagctatttcacttagaaaagataaaataaagtaaaactgtttttatataagctgt 32386167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 90 - 161
Target Start/End: Complemental strand, 32386706 - 32386635
Alignment:
Q  90 tcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataag 161  Q
    ||||||||| |||||||||||   |||||| |||| ||| |||||||||| || ||||||||||||||||||    
T  32386706 tcatataagtgcttatgtatagactatttcactaagaaaagataaaataaggtcaaattgttttcatataag 32386635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 114 - 184
Target Start/End: Original strand, 769090 - 769160
Alignment:
Q  114 tatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagcta 184  Q
    ||||||| ||||||| | |||||||||||||| || ||||  |||||||| |||||| |||||||||||||    
T  769090 tatttctataacaaaagctaaaataaagttaatttttttttgtataagctataaactgttttcataagcta 769160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 71 - 156
Target Start/End: Original strand, 9732384 - 9732469
Alignment:
Q  71 cttatagcataaacacttgtcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcat 156  Q
    ||||||||||||||| ||  |||||||| ||||||| ||| | ||||||| ||  ||| |||||||| |||| |||||||||||||    
T  9732384 cttatagcataaacatttaccatataagtgcttatgcataagctatttctatattaaaggataaaattaagtcaaattgttttcat 9732469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 116 - 169
Target Start/End: Original strand, 29940749 - 29940802
Alignment:
Q  116 tttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaac 169  Q
    ||||| ||||||| ||||||||||||| || |||||||||| ||||||||||||    
T  29940749 tttctataacaaaagataaaataaagtcaatttgttttcatttaagctgtaaac 29940802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 71 - 158
Target Start/End: Original strand, 1497888 - 1497976
Alignment:
Q  71 cttatagcataaacacttgtcatataagggcttatgtatacgttatttctctaa-caaacgataaaataaagttaaattgttttcatat 158  Q
    |||||||||||||||||| |||| |||| |||||||| || | ||||| | ||| |||| | ||||||||||| ||| |||||||||||    
T  1497888 cttatagcataaacacttatcatttaagtgcttatgtttaagctatttttttaaccaaaaggtaaaataaagtcaaactgttttcatat 1497976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 101 - 189
Target Start/End: Original strand, 24476540 - 24476628
Alignment:
Q  101 cttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagctattttg 189  Q
    |||||||||| | ||||||| || |||| ||||||||  ||||||||| |||||||||||||  ||| |  |||| |||||||||||||    
T  24476540 cttatgtataagctatttctatagcaaaagataaaatgtagttaaattattttcatataagcgataagcagttttgataagctattttg 24476628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 130 - 198
Target Start/End: Complemental strand, 28088325 - 28088257
Alignment:
Q  130 gataaaataaagttaaattgttttcatataagctgtaaactattttcataagctattttgaagagctca 198  Q
    |||||||||||   | |||||||||||||||||| |||||| ||||||||||||||  || ||||||||    
T  28088325 gataaaataaatgcagattgttttcatataagctataaactgttttcataagctatcatggagagctca 28088257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 183
Target Start/End: Original strand, 33259744 - 33259836
Alignment:
Q  91 catataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagct 183  Q
    |||||||| ||||||||||| | ||||| | ||||||| |||||| | |||| | | ||||||| |||| ||| ||| |||||||||||||||    
T  33259744 catataagtgcttatgtataagctatttttataacaaaagataaattgaagtcatactgttttcctatatgctataagctattttcataagct 33259836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 101 - 193
Target Start/End: Original strand, 33736776 - 33736868
Alignment:
Q  101 cttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagctattttgaaga 193  Q
    |||||||||| ||||||||| ||||| |  |||||||||||||||||||  ||| ||| || | ||| |||||| ||| |||||| |||||||    
T  33736776 cttatgtataagttatttctataacataacataaaataaagttaaattgccttcgtatcagttataagctatttacattagctatcttgaaga 33736868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 90 - 161
Target Start/End: Complemental strand, 3217333 - 3217262
Alignment:
Q  90 tcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataag 161  Q
    ||||||||| ||||||||||| | ||||| | ||| | | ||||||||||||| ||||| ||||||||||||    
T  3217333 tcatataagtgcttatgtataagctatttttgtaagagaagataaaataaagtcaaattattttcatataag 3217262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 125 - 196
Target Start/End: Complemental strand, 3785808 - 3785737
Alignment:
Q  125 caaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagctattttgaagagct 196  Q
    |||| ||||||||||||||||| ||||||| |||||||| ||| || ||||  ||||||||| || ||||||    
T  3785808 caaaagataaaataaagttaaactgttttcgtataagctataagctgtttttgtaagctattctggagagct 3785737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 106 - 157
Target Start/End: Original strand, 10728575 - 10728626
Alignment:
Q  106 gtatacgttatttctctaacaaacgataaaataaagttaaattgttttcata 157  Q
    ||||| |||||||||  | |||| ||||||||||||||||||||||||||||    
T  10728575 gtataagttatttctaaagcaaaagataaaataaagttaaattgttttcata 10728626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 114 - 161
Target Start/End: Complemental strand, 10749347 - 10749300
Alignment:
Q  114 tatttctctaacaaacgataaaataaagttaaattgttttcatataag 161  Q
    ||||||| ||| ||| ||||||||||||||||||| ||||||||||||    
T  10749347 tatttctataataaaagataaaataaagttaaattattttcatataag 10749300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 90 - 169
Target Start/End: Original strand, 21959655 - 21959734
Alignment:
Q  90 tcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaac 169  Q
    ||||| ||| ||||| ||||| | ||||||  ||||||| ||||||||||||| || |||||| |||||||||| |||||    
T  21959655 tcatagaagtgcttaagtataagctatttccataacaaaagataaaataaagtcaatttgtttgcatataagctataaac 21959734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 130 - 185
Target Start/End: Original strand, 25426137 - 25426192
Alignment:
Q  130 gataaaataaagttaaattgttttcatataagctgtaaactattttcataagctat 185  Q
    ||||||||||||| |||||| |||||| |||||| ||| ||||||| |||||||||    
T  25426137 gataaaataaagtcaaattgctttcatgtaagctataagctatttttataagctat 25426192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 116 - 167
Target Start/End: Complemental strand, 27595684 - 27595633
Alignment:
Q  116 tttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaa 167  Q
    ||||| ||| ||| ||||||||||||| ||||| ||||||||||||||||||    
T  27595684 tttctataataaaagataaaataaagtcaaattattttcatataagctgtaa 27595633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 130 - 185
Target Start/End: Complemental strand, 31671177 - 31671122
Alignment:
Q  130 gataaaataaagttaaattgttttcatataagctgtaaactattttcataagctat 185  Q
    ||||||| |||||||||||||||||||||||||| ||| || ||||| ||| ||||    
T  31671177 gataaaacaaagttaaattgttttcatataagctataagctgttttcgtaaactat 31671122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 71 - 181
Target Start/End: Original strand, 3155084 - 3155194
Alignment:
Q  71 cttatagcataaacacttgtcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaact 170  Q
    |||||||||||| |  || ||||||||  | ||||||||| | ||| ||| | ||||| ||||||| ||||| ||| ||||| ||||||| || ||| ||    
T  3155084 cttatagcataagcgtttatcatataaatggttatgtataagctatctcttttacaaaagataaaacaaagtcaaactgtttccatataacctataagct 3155183  T
Q  171 attttcataag 181  Q
    |||||||||||    
T  3155184 attttcataag 3155194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 90 - 160
Target Start/End: Complemental strand, 8420340 - 8420270
Alignment:
Q  90 tcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataa 160  Q
    ||||||||| ||||||||| | ||||||||| ||| ||| ||||||||||||| ||| ||| || ||||||    
T  8420340 tcatataagtgcttatgtacaagttatttctttaataaatgataaaataaagtcaaactgtgtttatataa 8420270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 71 - 161
Target Start/End: Original strand, 9027485 - 9027575
Alignment:
Q  71 cttatagcataaacacttgtcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataag 161  Q
    |||||||||| ||||||| | ||||||| |||||| |||| | |||||||  || | | ||||||||||||| ||| |||||| |||||||    
T  9027485 cttatagcatgaacacttattatataagtgcttatctataagctatttctacaatagaagataaaataaagtcaaactgttttaatataag 9027575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 114 - 160
Target Start/End: Complemental strand, 30537065 - 30537019
Alignment:
Q  114 tatttctctaacaaacgataaaataaagttaaattgttttcatataa 160  Q
    ||||||| ||||||| ||||||||||| |||| ||||||||||||||    
T  30537065 tatttctataacaaaagataaaataaaattaatttgttttcatataa 30537019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 71 - 137
Target Start/End: Complemental strand, 31668847 - 31668781
Alignment:
Q  71 cttatagcataaacacttgtcatataagggcttatgtatacgttatttctctaacaaacgataaaat 137  Q
    |||||||||||| || || ||||||||| ||||||||||| | ||||||| |||||||  |||||||    
T  31668847 cttatagcataagcaattatcatataagtgcttatgtataagctatttctataacaaaacataaaat 31668781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 114 - 196
Target Start/End: Complemental strand, 33787864 - 33787782
Alignment:
Q  114 tatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagctattttgaagagct 196  Q
    ||||||| |||||||  |||||| ||||| |||||| ||||||||||| | ||| || |||||||||| ||| ||| ||||||    
T  33787864 tatttctataacaaaatataaaacaaagtcaaattgatttcatataagttataagctgttttcataagttatcttggagagct 33787782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 191
Target Start/End: Original strand, 2735028 - 2735097
Alignment:
Q  122 taacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagctattttgaa 191  Q
    ||||||| ||||||||||||||||||| ||||  ||||| || ||| || ||||||||||| || |||||    
T  2735028 taacaaaagataaaataaagttaaattatttttgtataatctataagctgttttcataagcaatcttgaa 2735097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 163
Target Start/End: Complemental strand, 4325451 - 4325378
Alignment:
Q  90 tcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagct 163  Q
    ||||||||| |||||||| || ||||||||| ||| ||| ||||||||| ||  ||| | ||||||||||||||    
T  4325451 tcatataagtgcttatgtctaagttatttctataataaatgataaaatagagacaaactattttcatataagct 4325378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 183
Target Start/End: Complemental strand, 7485167 - 7485118
Alignment:
Q  134 aaataaagttaaattgttttcatataagctgtaaactattttcataagct 183  Q
    ||||||||||||||| |||||||||||||| |||  | ||||||||||||    
T  7485167 aaataaagttaaatttttttcatataagctataagttgttttcataagct 7485118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 163
Target Start/End: Complemental strand, 10452503 - 10452430
Alignment:
Q  90 tcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagct 163  Q
    |||||| || ||||||||||| | ||||||| |||||||  |||||||||| | ||| | ||||||||||||||    
T  10452503 tcatatcagtgcttatgtataagctatttctataacaaaatataaaataaaatcaaactattttcatataagct 10452430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 167
Target Start/End: Complemental strand, 27615376 - 27615339
Alignment:
Q  130 gataaaataaagttaaattgttttcatataagctgtaa 167  Q
    ||||||||||||| ||||| ||||||||||||||||||    
T  27615376 gataaaataaagtcaaattcttttcatataagctgtaa 27615339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 167
Target Start/End: Complemental strand, 27693542 - 27693505
Alignment:
Q  130 gataaaataaagttaaattgttttcatataagctgtaa 167  Q
    ||||||||||||| ||||| ||||||||||||||||||    
T  27693542 gataaaataaagtcaaattattttcatataagctgtaa 27693505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 163
Target Start/End: Complemental strand, 28621221 - 28621180
Alignment:
Q  122 taacaaacgataaaataaagttaaattgttttcatataagct 163  Q
    ||||||| ||||||||||||||||||||||||  ||||||||    
T  28621221 taacaaaagataaaataaagttaaattgtttttgtataagct 28621180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 163
Target Start/End: Original strand, 34611839 - 34611872
Alignment:
Q  130 gataaaataaagttaaattgttttcatataagct 163  Q
    ||||||||||||||||||||||||| ||||||||    
T  34611839 gataaaataaagttaaattgttttcttataagct 34611872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 124 - 196
Target Start/End: Complemental strand, 3181177 - 3181105
Alignment:
Q  124 acaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagctattttgaagagct 196  Q
    ||||| ||||||||||||| |||  |||||||||||| |  |||||| |||||||||| ||| ||| ||||||    
T  3181177 acaaaagataaaataaagtcaaaccgttttcatataaaccataaactgttttcataagttatcttggagagct 3181105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 76 - 152
Target Start/End: Original strand, 24332856 - 24332931
Alignment:
Q  76 agcataaacacttgtcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttt 152  Q
    ||||||| ||||| || |||||| | ||||||||| | ||||||| ||| ||| |||||||||||||||| ||||||    
T  24332856 agcataagcacttatcctataagtgattatgtataagctatttctttaaaaaa-gataaaataaagttaatttgttt 24332931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 100 - 160
Target Start/End: Original strand, 31624195 - 31624255
Alignment:
Q  100 gcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataa 160  Q
    |||| |||||| | ||||||| ||||||| ||||||||||  ||||||||||||| |||||    
T  31624195 gcttgtgtataagctatttctataacaaaagataaaataagtttaaattgttttcgtataa 31624255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 49; Significance: 6e-19; HSPs: 80)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 125 - 193
Target Start/End: Original strand, 51630073 - 51630141
Alignment:
Q  125 caaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagctattttgaaga 193  Q
    |||| |||||||||||||||||||||||| ||||||||| ||| ||||||||||||||||| |||||||    
T  51630073 caaaagataaaataaagttaaattgttttgatataagctataagctattttcataagctatcttgaaga 51630141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 72 - 181
Target Start/End: Original strand, 25409795 - 25409904
Alignment:
Q  72 ttatagcataaacacttgtcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaacta 171  Q
    ||||||||||||||||| ||||||||  |||||||| || | ||||||  ||| ||| ||||| |||| ||||||||||||||||||||| | ||||||     
T  25409795 ttatagcataaacacttatcatataactgcttatgtctaaggtatttcattaaaaaaagataagataaggttaaattgttttcatataagatataaactg 25409894  T
Q  172 ttttcataag 181  Q
    ||||| ||||    
T  25409895 ttttcgtaag 25409904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 90 - 163
Target Start/End: Original strand, 30024627 - 30024700
Alignment:
Q  90 tcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagct 163  Q
    |||||||||  |||||| ||| ||||||||| ||||||| ||||||||||||| ||||||||||||||||||||    
T  30024627 tcatataagtacttatgcataagttatttctataacaaaagataaaataaagtaaaattgttttcatataagct 30024700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 80 - 185
Target Start/End: Complemental strand, 54325190 - 54325085
Alignment:
Q  80 taaacacttgtcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcata 179  Q
    |||| |||| ||||||||| |||| ||||||   ||||||| | ||||| ||||||||||||| ||| |||||||||||||||| ||| ||||||||| |    
T  54325190 taaatacttatcatataagtgcttgtgtataaactatttctattacaaaagataaaataaagtcaaactgttttcatataagctataagctattttcaaa 54325091  T
Q  180 agctat 185  Q
    ||||||    
T  54325090 agctat 54325085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 90 - 165
Target Start/End: Complemental strand, 22684659 - 22684584
Alignment:
Q  90 tcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgt 165  Q
    ||||||||  |||| |||||| | ||||||| ||||||||| ||||||||||| ||||||||||||||||||||||    
T  22684659 tcatataaatgcttctgtataagctatttctataacaaacggtaaaataaagtcaaattgttttcatataagctgt 22684584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 133 - 196
Target Start/End: Complemental strand, 28300399 - 28300336
Alignment:
Q  133 aaaataaagttaaattgttttcatataagctgtaaactattttcataagctattttgaagagct 196  Q
    |||||||||||||||||||||  |||||||| ||||||||||||||| ||||| ||||||||||    
T  28300399 aaaataaagttaaattgtttttgtataagctataaactattttcataggctatcttgaagagct 28300336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 92 - 181
Target Start/End: Original strand, 8130103 - 8130192
Alignment:
Q  92 atataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataag 181  Q
    ||||||| ||||| ||||  ||| ||||| ||||||| ||||| ||||||| ||||| |||||||||||||| |||||| ||||||||||    
T  8130103 atataagtgcttacgtatgagttctttctataacaaaagataacataaagtcaaattattttcatataagctataaactgttttcataag 8130192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 102 - 163
Target Start/End: Original strand, 26883934 - 26883995
Alignment:
Q  102 ttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagct 163  Q
    ||||||||| ||||||||||||| ||  |||||||| |||||||||||||||||||||||||    
T  26883934 ttatgtataagttatttctctaagaagagataaaatgaagttaaattgttttcatataagct 26883995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 100 - 185
Target Start/End: Original strand, 29263307 - 29263392
Alignment:
Q  100 gcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagctat 185  Q
    |||||| |||| ||||||||||||||| | ||||||||||||||| |||||||||| ||||||  |||  | ||||||||||||||    
T  29263307 gcttatctataagttatttctctaacagatgataaaataaagttacattgttttcaaataagcgataagttgttttcataagctat 29263392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 101 - 185
Target Start/End: Original strand, 6364087 - 6364171
Alignment:
Q  101 cttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagctat 185  Q
    |||||||||| | ||||||| ||||||| ||||||||||||| ||||| | |||| ||||||| ||| | |||||||||||||||    
T  6364087 cttatgtataagctatttctataacaaaagataaaataaagtgaaattctgttcacataagctataagcaattttcataagctat 6364171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 84 - 184
Target Start/End: Complemental strand, 30207719 - 30207620
Alignment:
Q  84 cacttgtcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagct 183  Q
    ||||| ||||||||| ||||||||||| |||| |||| |||||||  |||||||||| | ||| |||||||||||||||| |||  | ||||||||||||    
T  30207719 cacttatcatataagtgcttatgtatatgttagttctataacaaaaaataaaataaa-tcaaactgttttcatataagctataagttgttttcataagct 30207621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 100 - 183
Target Start/End: Complemental strand, 30338725 - 30338641
Alignment:
Q  100 gcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaact-attttcataagct 183  Q
    |||||||||||   ||||||| ||||||| |||| |||||||||||| |||||||||||||||| ||||||  ||||||||||||    
T  30338725 gcttatgtataaactatttctataacaaaagatagaataaagttaaactgttttcatataagctataaactgtttttcataagct 30338641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 74 - 185
Target Start/End: Original strand, 44319861 - 44319971
Alignment:
Q  74 atagcataaacacttgtcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactatt 173  Q
    ||||||||| ||||| ||||||||| ||| |||||||   ||||||| ||| ||| |||||||||||||  || ||||||||||||||||  || |||||    
T  44319861 atagcataagcacttatcatataagtgctcatgtataaactatttctataaaaaa-gataaaataaagtcgaactgttttcatataagctacaagctatt 44319959  T
Q  174 ttcataagctat 185  Q
    || |||||||||    
T  44319960 ttgataagctat 44319971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 43 - 161
Target Start/End: Original strand, 24193465 - 24193583
Alignment:
Q  43 ttgtttgcattaaaaacttcatttagtacttatagcataaacacttgtcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagt 142  Q
    ||||||| || || ||||| ||| || ||||||||||||||| ||| |||||||||  |||||||||| ||||||| |  ||||||  |||||| | |||    
T  24193465 ttgtttggataaacaacttaattgagcacttatagcataaacgcttatcatataagtacttatgtataagttatttttacaacaaaatataaaacagagt 24193564  T
Q  143 taaattgttttcatataag 161  Q
    |||| | ||||||||||||    
T  24193565 taaactattttcatataag 24193583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 100 - 189
Target Start/End: Original strand, 24160927 - 24161016
Alignment:
Q  100 gcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagctattttg 189  Q
    ||||||||||| | ||||||| ||||||| |||||||| |||||||||| ||||||| || ||| |||  | | ||||||||||||||||    
T  24160927 gcttatgtataagctatttctataacaaaggataaaatcaagttaaattattttcatgtaggctataagttgtgttcataagctattttg 24161016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 113 - 193
Target Start/End: Complemental strand, 47119085 - 47119005
Alignment:
Q  113 ttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagctattttgaaga 193  Q
    |||||||| || |||| ||||||| |||||||||||||||||||||||||| |||  | | |||||| ||||| |||||||    
T  47119085 ttatttctatatcaaaagataaaacaaagttaaattgttttcatataagctataagttgtattcatatgctatcttgaaga 47119005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 106 - 194
Target Start/End: Original strand, 49219082 - 49219170
Alignment:
Q  106 gtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagctattttgaagag 194  Q
    ||||| ||||||||| |||||||  |||||||||||| ||||| |||||||||||||| |||  | ||||||||| |||| || |||||    
T  49219082 gtataagttatttctataacaaaatataaaataaagtcaaattattttcatataagctataagttgttttcataaactatcttaaagag 49219170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 125 - 188
Target Start/End: Complemental strand, 437540 - 437477
Alignment:
Q  125 caaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagctatttt 188  Q
    |||| ||||||||||||||||||||| |||||||||| | |||  | |||||||||||||||||    
T  437540 caaaagataaaataaagttaaattgtgttcatataagttttaagttgttttcataagctatttt 437477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 122 - 185
Target Start/End: Complemental strand, 6978820 - 6978757
Alignment:
Q  122 taacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagctat 185  Q
    ||||||| ||||||||| ||||||| | ||||||||||| ||  ||||||||||||||||||||    
T  6978820 taacaaaagataaaatatagttaaactattttcatataaactacaaactattttcataagctat 6978757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 71 - 163
Target Start/End: Complemental strand, 8703784 - 8703690
Alignment:
Q  71 cttatagcataaacacttgtcatataagggcttatgtatacgttatttctctaacaaacgataaaataaag--ttaaattgttttcatataagct 163  Q
    |||||| |||||| |||| ||| || || ||||||||||| | ||||||||||||||| ||||||| ||||  | ||| ||||||||||||||||    
T  8703784 cttataacataaatacttatcagatgagtgcttatgtataagctatttctctaacaaaggataaaaaaaagtatcaaactgttttcatataagct 8703690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 71 - 186
Target Start/End: Original strand, 24443946 - 24444061
Alignment:
Q  71 cttatagcataaacacttgtcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaact 170  Q
    |||||||||||| ||||| |||||||||  |||||||||| |  ||||||  ||||||  |||||||||| | |||   |||||||||||||| |||  |    
T  24443946 cttatagcataagcacttatcatataagttcttatgtataagcgatttctacaacaaaatataaaataaattcaaacaattttcatataagctataagtt 24444045  T
Q  171 attttcataagctatt 186  Q
     |||||||||||||||    
T  24444046 gttttcataagctatt 24444061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 100 - 163
Target Start/End: Complemental strand, 27043963 - 27043900
Alignment:
Q  100 gcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagct 163  Q
    ||||||||||| | || || | ||||||| ||||||||||||||||||||||||| ||||||||    
T  27043963 gcttatgtataaggtacttatataacaaaggataaaataaagttaaattgttttcgtataagct 27043900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 104 - 183
Target Start/End: Complemental strand, 31038996 - 31038917
Alignment:
Q  104 atgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagct 183  Q
    |||||||||||||||||  || ||  ||||||||||||| |||||||||||||||||| | ||| | ||||| |||||||    
T  31038996 atgtatacgttatttctacaataatagataaaataaagtcaaattgttttcatataagttataagccatttttataagct 31038917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 130 - 193
Target Start/End: Original strand, 32421072 - 32421135
Alignment:
Q  130 gataaaataaagttaaattgttttcatataagctgtaaactattttcataagctattttgaaga 193  Q
    |||||||||||||| |||||||| |||||||||| ||| |  ||| ||||||||||||||||||    
T  32421072 gataaaataaagtttaattgtttacatataagctataagcagtttccataagctattttgaaga 32421135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 100 - 179
Target Start/End: Original strand, 47946135 - 47946214
Alignment:
Q  100 gcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcata 179  Q
    |||||| |||| ||||||||| ||||  | |||||||| |||||||||||||||| |||||||| |||| | ||||||||    
T  47946135 gcttatttataagttatttctataacgtaagataaaatgaagttaaattgttttcgtataagctataaattgttttcata 47946214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 103 - 166
Target Start/End: Original strand, 49803151 - 49803214
Alignment:
Q  103 tatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgta 166  Q
    |||||||| ||||||||| || |||| |||||||| ||||||||||||||||| ||||| ||||    
T  49803151 tatgtataagttatttctatagcaaaagataaaatgaagttaaattgttttcacataagttgta 49803214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 103 - 193
Target Start/End: Original strand, 3155543 - 3155633
Alignment:
Q  103 tatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagctattttgaaga 193  Q
    |||||||| | ||||||| || |||| ||||||||||||||||||||||||  || |||||  || || ||||||||| |||| |||||||    
T  3155543 tatgtataagctatttctatagcaaaagataaaataaagttaaattgtttttgtacaagctacaagctgttttcataaactatcttgaaga 3155633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 114 - 196
Target Start/End: Original strand, 17884019 - 17884101
Alignment:
Q  114 tatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagctattttgaagagct 196  Q
    ||||||| ||||||| ||||||||||||||||||||||||  |||||| | | |  | |||||||||||||| ||| ||||||    
T  17884019 tatttctataacaaaagataaaataaagttaaattgtttttgtataagttatcagttgttttcataagctatattggagagct 17884101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 114 - 196
Target Start/End: Original strand, 29778747 - 29778828
Alignment:
Q  114 tatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagctattttgaagagct 196  Q
    ||||||| |||||||  ||||| ||| || ||||||||||||||||||||||||  | |||||||||||||  ||||||||||    
T  29778747 tatttctttaacaaaa-ataaattaaggtgaaattgttttcatataagctgtaagttgttttcataagctaccttgaagagct 29778828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 130 - 196
Target Start/End: Complemental strand, 35290290 - 35290224
Alignment:
Q  130 gataaaataaagttaaattgttttcatataagctgtaaactattttcataagctattttgaagagct 196  Q
    ||||||||||||||||||||| |||||||||| |  || || |||||||||||||| || |||||||    
T  35290290 gataaaataaagttaaattgtattcatataagttagaagcttttttcataagctatctttaagagct 35290224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 71 - 157
Target Start/End: Complemental strand, 35727195 - 35727109
Alignment:
Q  71 cttatagcataaacacttgtcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcata 157  Q
    ||||||||||| |||||| ||||| |||||||||||  || | ||||||| ||||||| | | ||||||| |||||||| |||||||    
T  35727195 cttatagcatacacacttatcataaaagggcttatgcgtaagctatttctataacaaaagttcaaataaaattaaattgatttcata 35727109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 85 - 155
Target Start/End: Original strand, 47970240 - 47970310
Alignment:
Q  85 acttgtcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttca 155  Q
    |||||||||||||| ||||||||||| | ||||||| ||||||| |||||||| |||| ||| | ||||||    
T  47970240 acttgtcatataagtgcttatgtataagctatttctataacaaaagataaaatgaagtcaaactattttca 47970310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 71 - 182
Target Start/End: Original strand, 50298438 - 50298546
Alignment:
Q  71 cttatagcataaacacttgtcat-ataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaac 169  Q
    |||||||||||||||||| |||| ||||  ||||||||||| ||| ||||  ||||||  |||||  ||||||||||||||||||| ||||||| ||| |    
T  50298438 cttatagcataaacacttatcatgataaatgcttatgtataagttgtttccataacaa--gataa--taaagttaaattgttttcacataagctataatc 50298533  T
Q  170 tattttcataagc 182  Q
      |||||||||||    
T  50298534 agttttcataagc 50298546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 116 - 182
Target Start/End: Original strand, 53626729 - 53626795
Alignment:
Q  116 tttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagc 182  Q
    ||||| ||||||| ||||||||||| | ||| |||||||||||||||| ||| || |||||||||||    
T  53626729 tttctataacaaaagataaaataaattcaaaatgttttcatataagctataagctgttttcataagc 53626795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 114 - 163
Target Start/End: Original strand, 4071833 - 4071882
Alignment:
Q  114 tatttctctaacaaacgataaaataaagttaaattgttttcatataagct 163  Q
    ||||||| ||||||| ||||||||||||| ||||| ||||||||||||||    
T  4071833 tatttctataacaaaagataaaataaagtcaaattattttcatataagct 4071882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 116 - 185
Target Start/End: Complemental strand, 26520346 - 26520277
Alignment:
Q  116 tttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagctat 185  Q
    ||||| ||||||| ||| ||||||||||||||||||||| | |||||| ||| ||||||| ||| |||||    
T  26520346 tttctataacaaaagatgaaataaagttaaattgttttcgtgtaagctataagctatttttatatgctat 26520277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 131 - 184
Target Start/End: Original strand, 40174531 - 40174584
Alignment:
Q  131 ataaaataaagttaaattgttttcatataagctgtaaactattttcataagcta 184  Q
    ||||| ||||||||||||||||||||| ||||| ||| || |||||||||||||    
T  40174531 ataaattaaagttaaattgttttcataaaagctataagctgttttcataagcta 40174584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 113 - 196
Target Start/End: Original strand, 47800580 - 47800656
Alignment:
Q  113 ttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagctattttgaagagct 196  Q
    |||||||| ||||||| ||||||||||||||||| ||||||  |||||||||       |||||||||||||| ||||||||||    
T  47800580 ttatttctataacaaaagataaaataaagttaaaatgtttttgtataagctg-------ttttcataagctatcttgaagagct 47800656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 71 - 154
Target Start/End: Original strand, 485989 - 486073
Alignment:
Q  71 cttatagcataaacacttgtcatataagggcttatgtatacgttatttctctaacaaacgataaaat-aaagttaaattgttttc 154  Q
    |||||||||||| | ||| ||||| ||| ||||||||||| | |||||||  |||||| |||||||| ||||| |||||||||||    
T  485989 cttatagcataagcgcttatcataaaagtgcttatgtatatgctatttctaaaacaaaagataaaataaaagtcaaattgttttc 486073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 157
Target Start/End: Original strand, 4191666 - 4191734
Alignment:
Q  90 tcatataagggcttatgtatacgttatttctctaacaaacgat-aaaataaagttaaattgttttcata 157  Q
    ||||||||| ||||||||||| | ||||||| ||||||| ||| |||||||||| ||| ||||||||||    
T  4191666 tcatataagtgcttatgtataagctatttctataacaaaagataaaaataaagtcaaactgttttcata 4191734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 206
Target Start/End: Complemental strand, 5219643 - 5219527
Alignment:
Q  90 tcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagctattttg 189  Q
    ||||||||| ||| ||||||| | ||| ||| ||| ||| ||||||||||||||||| | |||||||||||    ||| ||||||||| || |||| ||     
T  5219643 tcatataagtgctcatgtatatgctatctctataataaaagataaaataaagttaaactattttcatataaataataagctattttcacaaactatcttc 5219544  T
Q  190 aagagctcagaaaaata 206  Q
    ||||||| | |||||||    
T  5219543 aagagcttaaaaaaata 5219527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 191
Target Start/End: Complemental strand, 29374021 - 29373929
Alignment:
Q  99 ggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagctattttgaa 191  Q
    ||||||| |||| | ||||||| ||||| | |||||||||| || ||| ||| |||||||||||| |||  | |||||||||| |||||||||    
T  29374021 ggcttatatataagctatttctataacagaagataaaataatgtcaaaatgtattcatataagctataatttgttttcataagttattttgaa 29373929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 189
Target Start/End: Original strand, 42685386 - 42685450
Alignment:
Q  125 caaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagctattttg 189  Q
    |||| |||||||| |||||||||||||||  |||||||| |||  | ||||||||||||||||||    
T  42685386 caaaagataaaatgaagttaaattgtttttttataagctctaagttgttttcataagctattttg 42685450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 101 - 156
Target Start/End: Complemental strand, 5131364 - 5131309
Alignment:
Q  101 cttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcat 156  Q
    |||||||||| ||| ||| | ||||||| ||||||||||||||||| |||||||||    
T  5131364 cttatgtataagttgtttatataacaaaagataaaataaagttaaaatgttttcat 5131309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 94 - 153
Target Start/End: Original strand, 7601690 - 7601749
Alignment:
Q  94 ataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgtttt 153  Q
    ||||| ||||||||||| | |||| || || |||| ||||||||||||||||||||||||    
T  7601690 ataagcgcttatgtataagctattcctatagcaaaggataaaataaagttaaattgtttt 7601749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 94 - 181
Target Start/End: Original strand, 11389457 - 11389544
Alignment:
Q  94 ataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataag 181  Q
    ||||| |||||||||||  |||||||| ||| ||| |||||| |||||||||| |||||| |||||| || |||   |||||||||||    
T  11389457 ataagtgcttatgtataaattatttctataaaaaaagataaagtaaagttaaactgttttaatataaactataagtcattttcataag 11389544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 90 - 185
Target Start/End: Original strand, 18630607 - 18630702
Alignment:
Q  90 tcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagctat 185  Q
    ||||||||| ||||||| |||   ||||||  ||||||| ||||||||||||| || | ||||||||||||||| |||  | |||||| |||||||    
T  18630607 tcatataagcgcttatgcataaactatttcaataacaaaagataaaataaagtcaattggttttcatataagctataagttgttttcacaagctat 18630702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 134 - 181
Target Start/End: Original strand, 24091434 - 24091481
Alignment:
Q  134 aaataaagttaaattgttttcatataagctgtaaactattttcataag 181  Q
    ||||||||| ||||| |||||||||||||| |||||| ||||||||||    
T  24091434 aaataaagtcaaattattttcatataagctataaactgttttcataag 24091481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 39 - 157
Target Start/End: Complemental strand, 25548298 - 25548182
Alignment:
Q  39 ggtcttgtttgcattaaaaacttcatttagtacttatagcataaacacttgtcatataagggcttatgtatacgttatttctctaacaaacgataaaata 138  Q
    |||| |||||| ||||| || || ||| || | ||||| ||||| |||||| |||| ||| ||||||| ||| | ||||||| ||||||  | |||||||    
T  25548298 ggtcctgtttggattaacaatttaattaagcaattatatcataagcacttgccataaaagtgcttatgcataagctatttctataacaa--ggtaaaata 25548201  T
Q  139 aagttaaattgttttcata 157  Q
    ||||||| |||||||||||    
T  25548200 aagttaagttgttttcata 25548182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 92 - 172
Target Start/End: Original strand, 28623218 - 28623300
Alignment:
Q  92 atataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaa--ttgttttcatataagctgtaaactat 172  Q
    ||||||| ||||||||||| ||||||| | ||||||| |||||||||| ||||||   ||||||||| |||| | ||||||||    
T  28623218 atataagtgcttatgtataagttatttatataacaaaagataaaataatgttaaactgtgttttcatgtaagttataaactat 28623300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 122 - 165
Target Start/End: Complemental strand, 41701552 - 41701509
Alignment:
Q  122 taacaaacgataaaataaagttaaattgttttcatataagctgt 165  Q
    ||||||| ||||||||||||| |||| |||||||||||||||||    
T  41701552 taacaaaagataaaataaagtcaaatcgttttcatataagctgt 41701509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 122 - 185
Target Start/End: Complemental strand, 43372080 - 43372017
Alignment:
Q  122 taacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagctat 185  Q
    ||||||| ||||||||| ||| ||| |||||| ||||||||| ||||||  |||||||||||||    
T  43372080 taacaaaagataaaatacagtcaaactgtttttatataagctataaactgatttcataagctat 43372017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 122 - 185
Target Start/End: Complemental strand, 52746951 - 52746888
Alignment:
Q  122 taacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagctat 185  Q
    ||||||| ||||||||||||||||||||||||  | |||||  ||| || ||||||||||||||    
T  52746951 taacaaaagataaaataaagttaaattgtttttgtgtaagccataagctgttttcataagctat 52746888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 90 - 160
Target Start/End: Original strand, 19422345 - 19422415
Alignment:
Q  90 tcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataa 160  Q
    ||||||||  ||||||||||| ||||||||| ||||||| |||| |||||||| |||   |||||||||||    
T  19422345 tcatataaatgcttatgtataagttatttctataacaaaagatataataaagtcaaacatttttcatataa 19422415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 116 - 182
Target Start/End: Complemental strand, 22662364 - 22662298
Alignment:
Q  116 tttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagc 182  Q
    ||||| ||||| | |||||||||| || ||| |||||||| |||| || ||||||||||||||||||    
T  22662364 tttctgtaacacaagataaaataaggtcaaactgttttcagataatctataaactattttcataagc 22662298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 116 - 182
Target Start/End: Complemental strand, 22666843 - 22666777
Alignment:
Q  116 tttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagc 182  Q
    ||||| ||||| | |||||||||| || ||| |||||||| |||| || ||||||||||||||||||    
T  22666843 tttctgtaacacaagataaaataaggtcaaactgttttcagataatctataaactattttcataagc 22666777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 102 - 236
Target Start/End: Original strand, 23819029 - 23819162
Alignment:
Q  102 ttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagctattttgaagagctcagaa 201  Q
    ||||||||| ||||||||  |||||||  |||||||  ||| ||| |||||||||||||| | |||  | |||||||||||||| |||||||||| | |     
T  23819029 ttatgtataagttatttccataacaaat-ataaaatgtagtcaaactgttttcatataagttataacatgttttcataagctatcttgaagagcttatag 23819127  T
Q  202 aaatagcgtgaaaacaagtcataaacatgtcataa 236  Q
    |||||   ||||||||| | ||  |||||||||||    
T  23819128 aaataagatgaaaacaacttatggacatgtcataa 23819162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 122 - 160
Target Start/End: Complemental strand, 42321990 - 42321952
Alignment:
Q  122 taacaaacgataaaataaagttaaattgttttcatataa 160  Q
    ||||||| ||||||||||||| |||||||||||||||||    
T  42321990 taacaaatgataaaataaagtcaaattgttttcatataa 42321952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 102 - 168
Target Start/End: Complemental strand, 44119293 - 44119227
Alignment:
Q  102 ttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaa 168  Q
    ||||||||| ||||||||| || |||| ||||||| ||||| ||  |||||||||||||||| ||||    
T  44119293 ttatgtataagttatttctatagcaaaagataaaacaaagtcaatatgttttcatataagctataaa 44119227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 90 - 180
Target Start/End: Complemental strand, 45128453 - 45128363
Alignment:
Q  90 tcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataa 180  Q
    |||||||||  ||||||||||   ||||||| ||||||| |||||||| || | ||||| || ||||||||||| |||| | |||||||||    
T  45128453 tcatataagaacttatgtataaactatttctataacaaaagataaaatcaaatcaaattattctcatataagctataaattgttttcataa 45128363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 70 - 152
Target Start/End: Complemental strand, 51556030 - 51555948
Alignment:
Q  70 acttatagcataaacacttgtcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttt 152  Q
    ||||||| ||||| || || ||||||||| ||||||||||| | ||||  | ||||||| ||||||||||||| | |||||||    
T  51556030 acttataacataaccatttatcatataagtgcttatgtataagctattattataacaaaagataaaataaagtcagattgttt 51555948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 114 - 196
Target Start/End: Original strand, 52735073 - 52735155
Alignment:
Q  114 tatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagctattttgaagagct 196  Q
    ||||||| ||||||| ||||||||||||| |||||  ||||||||||| | ||   | ||||| |||||||| ||||||||||    
T  52735073 tatttctgtaacaaaagataaaataaagtcaaattactttcatataagttatatgttgttttcgtaagctatcttgaagagct 52735155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 163
Target Start/End: Complemental strand, 13949947 - 13949914
Alignment:
Q  130 gataaaataaagttaaattgttttcatataagct 163  Q
    ||||||||||||| ||||||||||||||||||||    
T  13949947 gataaaataaagtcaaattgttttcatataagct 13949914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 185
Target Start/End: Original strand, 20907328 - 20907369
Alignment:
Q  144 aaattgttttcatataagctgtaaactattttcataagctat 185  Q
    |||||||||||||||||||| |||||| |||||| |||||||    
T  20907328 aaattgttttcatataagctataaactgttttcacaagctat 20907369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 181
Target Start/End: Original strand, 25885812 - 25885877
Alignment:
Q  116 tttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataag 181  Q
    ||||| || |||| ||||||||||||||||||||||||| | |||||| |||  | ||||||||||    
T  25885812 tttctatagcaaaagataaaataaagttaaattgttttcgtgtaagctataagttgttttcataag 25885877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 185
Target Start/End: Complemental strand, 27321930 - 27321877
Alignment:
Q  132 taaaataaagttaaattgttttcatataagctgtaaactattttcataagctat 185  Q
    ||||||||||| |||||||||||||| ||||  ||| ||||||||| |||||||    
T  27321930 taaaataaagtaaaattgttttcatacaagcaataagctattttcaaaagctat 27321877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 100 - 185
Target Start/End: Original strand, 53155202 - 53155285
Alignment:
Q  100 gcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagctat 185  Q
    ||||||||||| | ||||| | ||||||| |||||| ||||||  || | |||||||||| ||| |||||||||||||||||||||    
T  53155202 gcttatgtataagctattt-tataacaaaagataaa-taaagtcgaactattttcatatatgctataaactattttcataagctat 53155285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 163
Target Start/End: Complemental strand, 54327576 - 54327519
Alignment:
Q  106 gtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagct 163  Q
    ||||| ||| ||||| ||||||| ||||||| ||||| ||| ||||||||||||||||    
T  54327576 gtataagttgtttctataacaaaagataaaacaaagtcaaactgttttcatataagct 54327519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 125 - 185
Target Start/End: Original strand, 3175913 - 3175973
Alignment:
Q  125 caaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagctat 185  Q
    |||| ||||||||||||| ||||||||||||  |||| | ||| || ||||||||||||||    
T  3175913 caaaagataaaataaagtcaaattgttttcaagtaagttataagctgttttcataagctat 3175973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 93 - 169
Target Start/End: Complemental strand, 4663836 - 4663760
Alignment:
Q  93 tataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaac 169  Q
    |||||| ||||||||||| ||||||||| |||||||  ||||||| |||  ||| | |||| |||||||||| ||||    
T  4663836 tataagtgcttatgtataagttatttctataacaaagaataaaatgaagccaaactatttttatataagctgaaaac 4663760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 72 - 163
Target Start/End: Complemental strand, 8422998 - 8422909
Alignment:
Q  72 ttatagcataaacacttgtcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagct 163  Q
    ||||||||||| ||  | ||||||| | ||||||||||| | ||||| | ||| ||| |||||||||||||   ||||||||||||||||||    
T  8422998 ttatagcataatcatgtatcatatatgtgcttatgtataagctatttttataaaaaaagataaaataaagt--cattgttttcatataagct 8422909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 112 - 160
Target Start/End: Original strand, 11917508 - 11917556
Alignment:
Q  112 gttatttctctaacaaacgataaaataaagttaaattgttttcatataa 160  Q
    ||||||| | ||||||| ||||||||||||| ||||| |||||||||||    
T  11917508 gttatttttgtaacaaaagataaaataaagtcaaattattttcatataa 11917556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 132 - 172
Target Start/End: Original strand, 21952930 - 21952970
Alignment:
Q  132 taaaataaagttaaattgttttcatataagctgtaaactat 172  Q
    ||||||||||| |||||||||||||||||||| ||| ||||    
T  21952930 taaaataaagtcaaattgttttcatataagctataagctat 21952970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 81 - 169
Target Start/End: Original strand, 32724037 - 32724125
Alignment:
Q  81 aaacacttgtcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaac 169  Q
    |||| ||| |||||| || |||||||| ||   ||||||| | ||||| ||||||||||||| ||| | ||||||||||||| ||||||    
T  32724037 aaacgcttctcatatcagtgcttatgtctaatctatttctattacaaaagataaaataaagtcaaactattttcatataagccgtaaac 32724125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 122 - 182
Target Start/End: Complemental strand, 35411123 - 35411064
Alignment:
Q  122 taacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagc 182  Q
    |||||||| ||||||| |||| |||||||||||||| ||||  |||||| |||||||||||    
T  35411123 taacaaactataaaattaagtcaaattgttttcata-aagccataaactgttttcataagc 35411064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 135 - 187
Target Start/End: Original strand, 44138712 - 44138764
Alignment:
Q  135 aataaagttaaattgttttcatataagctgtaaactattttcataagctattt 187  Q
    |||||||| ||  |||||||||||||||| |||| | ||||||||||||||||    
T  44138712 aataaagtcaatctgttttcatataagctataaaatgttttcataagctattt 44138764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 102 - 162
Target Start/End: Original strand, 44249225 - 44249285
Alignment:
Q  102 ttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagc 162  Q
    ||||||||| ||||||||  ||||||| ||||||| ||||||||||| ||| | |||||||    
T  44249225 ttatgtataagttatttcaataacaaaagataaaacaaagttaaattatttccgtataagc 44249285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 134 - 194
Target Start/End: Complemental strand, 46715096 - 46715036
Alignment:
Q  134 aaataaagttaaattgttttcatataagctgtaaactattttcataagctattttgaagag 194  Q
    ||||| ||| |||||||||| |||||||||  |||||||||||||||| ||| ||| ||||    
T  46715096 aaatacagtcaaattgtttttatataagctaaaaactattttcataagttatcttggagag 46715036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 94 - 181
Target Start/End: Complemental strand, 49004109 - 49004024
Alignment:
Q  94 ataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataag 181  Q
    ||||| ||||||||||| |  |||||| || |||| |||||||||  |||||||||||||| ||| |||| |||  ||||||||||||    
T  49004109 ataagcgcttatgtataagcaatttctatagcaaaagataaaata--gttaaattgttttcgtattagctataacttattttcataag 49004024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 102 - 157
Target Start/End: Complemental strand, 51044590 - 51044534
Alignment:
Q  102 ttatgtatacgttatttctctaacaaacgataaaataaagttaaa-ttgttttcata 157  Q
    ||||||||| | ||||||| ||||||| ||||||||||||| ||| |||||||||||    
T  51044590 ttatgtataagctatttctataacaaaagataaaataaagtcaaacttgttttcata 51044534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0590 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0590
Description:

Target: scaffold0590; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 57 - 162
Target Start/End: Complemental strand, 1250 - 1145
Alignment:
Q  57 aacttcatttagtacttatagcataaacacttgtcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcat 156  Q
    ||||| ||| ||||||||||||||||||   | ||||||||| ||||||||||| | ||||||| ||||||| ||||||||||||| ||| | || ||||    
T  1250 aacttaattaagtacttatagcataaacgtctatcatataagtgcttatgtataagctatttctataacaaaagataaaataaagtcaaactattctcat 1151  T
Q  157 ataagc 162  Q
    ||||||    
T  1150 ataagc 1145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0275 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 57 - 162
Target Start/End: Original strand, 2725 - 2830
Alignment:
Q  57 aacttcatttagtacttatagcataaacacttgtcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcat 156  Q
    ||||| ||| ||||||||||||||||||   | ||||||||| ||||||||||| | ||||||| ||||||| ||||||||||||| ||| | || ||||    
T  2725 aacttaattaagtacttatagcataaacgtctatcatataagtgcttatgtataagctatttctataacaaaagataaaataaagtcaaactattctcat 2824  T
Q  157 ataagc 162  Q
    ||||||    
T  2825 ataagc 2830  T

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Target: scaffold0549 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: scaffold0549
Description:

Target: scaffold0549; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 91 - 194
Target Start/End: Complemental strand, 1866 - 1763
Alignment:
Q  91 catataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagctattttga 190  Q
    |||||||| |||||| |||| | || |||| ||||||| |||||||||||||||| || |||||||||| ||| |||  |  |||||||||||||||| |    
T  1866 catataagtgcttatatataagataattctataacaaaagataaaataaagttaatttattttcatatacgctataagttggtttcataagctattttta 1767  T
Q  191 agag 194  Q
    ||||    
T  1766 agag 1763  T

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Target: scaffold0549; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 91 - 194
Target Start/End: Complemental strand, 3956 - 3853
Alignment:
Q  91 catataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagctattttga 190  Q
    |||||||| |||||| |||| | || |||| ||||||| |||||||||||||||| || |||||||||| ||| |||  |  |||||||||||||||| |    
T  3956 catataagtgcttatatataagataattctataacaaaagataaaataaagttaatttattttcatatacgctataagttggtttcataagctattttta 3857  T
Q  191 agag 194  Q
    ||||    
T  3856 agag 3853  T

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Target: scaffold0100 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 70 - 191
Target Start/End: Original strand, 42524 - 42644
Alignment:
Q  70 acttatagcataaacacttgtcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaac 169  Q
    |||||||||| | ||| || ||||||||| ||||||||||| || |||||| ||||||| ||||||||| ||| ||  || ||||||||||||| | |      
T  42524 acttatagcagacacatttatcatataagtgcttatgtataagtcatttctataacaaaagataaaatagagtaaacctg-tttcatataagctattagt 42622  T
Q  170 tattttcataagctattttgaa 191  Q
    | ||||||||||||||| ||||    
T  42623 tgttttcataagctattatgaa 42644  T

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Target: scaffold0103 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 103 - 158
Target Start/End: Original strand, 51508 - 51563
Alignment:
Q  103 tatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatat 158  Q
    |||||||| ||||||| | |||||||  ||||||||||||||||||||||||||||    
T  51508 tatgtataagttatttttataacaaaatataaaataaagttaaattgttttcatat 51563  T

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Target: scaffold0508 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0508
Description:

Target: scaffold0508; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 71 - 161
Target Start/End: Complemental strand, 9937 - 9847
Alignment:
Q  71 cttatagcataaacacttgtcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataag 161  Q
    ||||||| |||||  ||| ||||||| | ||||||||||| ||||||||| |||||||  ||||||| |||| |||  |||||||||||||    
T  9937 cttatagaataaatgcttatcatataggtgcttatgtataagttatttctataacaaaaaataaaattaagtcaaaaagttttcatataag 9847  T

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Target: scaffold0654 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0654
Description:

Target: scaffold0654; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 79 - 157
Target Start/End: Complemental strand, 6791 - 6713
Alignment:
Q  79 ataaacacttgtcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcata 157  Q
    |||| ||||| ||||||||| |||||||||||   ||||||| |||||||  ||||| | |||| ||||||||||||||    
T  6791 ataagcacttatcatataagtgcttatgtataaactatttctataacaaaaaataaacttaagtcaaattgttttcata 6713  T

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Target: scaffold0221 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 94 - 160
Target Start/End: Original strand, 20226 - 20292
Alignment:
Q  94 ataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataa 160  Q
    ||||| || |||||||| ||||||||| ||| |||  ||||||||| || |||||||||||||||||    
T  20226 ataagtgcgtatgtataagttatttctttaataaaacataaaataatgtcaaattgttttcatataa 20292  T

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Target: scaffold0014 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 79 - 157
Target Start/End: Complemental strand, 116710 - 116632
Alignment:
Q  79 ataaacacttgtcatataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcata 157  Q
    |||| ||||| ||||||||| |||||||||||   ||||||| |||||||  ||||| | |||| ||||||||||||||    
T  116710 ataagcacttatcatataagtgcttatgtataaactatttctataacaaaaaataaacttaagtcaaattgttttcata 116632  T

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Target: scaffold0428 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0428
Description:

Target: scaffold0428; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 91 - 183
Target Start/End: Original strand, 3832 - 3924
Alignment:
Q  91 catataagggcttatgtatacgttatttctctaacaaacgataaaataaagttaaattgttttcatataagctgtaaactattttcataagct 183  Q
    |||||||| |||||||| || | ||||| | ||||||| |||||| | |||| | | ||||||| |||| ||| ||| |||||||||||||||    
T  3832 catataagtgcttatgtgtaagctatttttataacaaaagataaactgaagtcatactgttttcctatatgctataagctattttcataagct 3924  T

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