View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8430_high_4 (Length: 234)
Name: NF8430_high_4
Description: NF8430
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8430_high_4 |
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Alignment Details
Target: chr5 (Bit Score: 190; Significance: 1e-103; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 17 - 218
Target Start/End: Original strand, 7264862 - 7265063
Alignment:
| Q |
17 |
atggattactaaaaagaagacataagtatcattatcattatgataaaatctccaaaagtaatgtttggctttggccagacagcagaaacatcatgactta |
116 |
Q |
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| T |
7264862 |
atggattactaaaaagaagacataaggatcattatcattatgataaaatctccaaaagtaatgtttggctttggccagacaacagaaacatcatgactta |
7264961 |
T |
|
| Q |
117 |
aagcatcactttgacatattcacatactatccttttcataccaatccataacatacctgcctatgagcctataataaacccaaagtcaccgacgcaccac |
216 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
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| T |
7264962 |
aagcatcactttgacatattcacatactatccttttcataccaatccataacatacctgcctatgagcctataataaacccaaggtcaccgacgcaccac |
7265061 |
T |
|
| Q |
217 |
ag |
218 |
Q |
| |
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|| |
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| T |
7265062 |
ag |
7265063 |
T |
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