View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8431_high_13 (Length: 238)
Name: NF8431_high_13
Description: NF8431
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8431_high_13 |
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Alignment Details
Target: chr5 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 11370203 - 11369977
Alignment:
| Q |
1 |
caaaacaaatgtctaaatgtaaacaagagtataagtatacaaagatataaagagcttaaacatagaggacaaaaactccatgcccaactgacccgacagc |
100 |
Q |
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| T |
11370203 |
caaaacaaatgtctaaatgtaaacaagagtataagtatacaaagatataaagagcttaaacatagaggacaaaaactccatgcccaacagacccgacggc |
11370104 |
T |
|
| Q |
101 |
tacatataaaataaaacaacacctaatttgcaaaactcaagtgttactggtacacccgttttcgaaaacaacacatcaatccctgcacctaatgtgtcaa |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
11370103 |
tacatataaaataaaacaacacctaatttgcaaaactcaagtggtactggtacacccgttttcgaaaacaacacatcaatccctgcacctaatgtgtcaa |
11370004 |
T |
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| Q |
201 |
atttcgtcaaaaaatgcaacttcaact |
227 |
Q |
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||||||||||||||||||||||||||| |
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| T |
11370003 |
atttcgtcaaaaaatgcaacttcaact |
11369977 |
T |
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