View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8431_low_21 (Length: 243)
Name: NF8431_low_21
Description: NF8431
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8431_low_21 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 13 - 243
Target Start/End: Original strand, 30948078 - 30948307
Alignment:
| Q |
13 |
catcatgttttcgtagacagaaacaaaaaggatttgtttctaatgaatctaaatgtgcagcttgtagaccaggctctgtccactgtaccaaatagcaagt |
112 |
Q |
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| T |
30948078 |
catcatgttttcatagacagaaacaaaaaggatttgtttctaatgaatctaaatgtgcagcttgtagaccaggctctgtccactgtaccaaatagcaagt |
30948177 |
T |
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| Q |
113 |
cttttatgtgtagaatggtggaaacttcaagccatgttctgaaagaaataatgtcacctccaacaattgctactgtgagttcccattcattttatttgac |
212 |
Q |
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| T |
30948178 |
cttttatgtgtagaatggtggaaacttcaagccatgttctgaaagaaataatgtcacctccaacaattgctactgtgagtt-ccattcattttatttgac |
30948276 |
T |
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| Q |
213 |
ttagattgttggtttagttttttatttcact |
243 |
Q |
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||||||||||||||||||||||||||||||| |
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| T |
30948277 |
ttagattgttggtttagttttttatttcact |
30948307 |
T |
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