View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8431_low_27 (Length: 210)
Name: NF8431_low_27
Description: NF8431
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8431_low_27 |
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Alignment Details
Target: chr7 (Bit Score: 188; Significance: 1e-102; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 15 - 202
Target Start/End: Original strand, 42526103 - 42526290
Alignment:
| Q |
15 |
gacatcagcaatcatgcaactcgcatatgcgcaaagattatttgagtaccatttttcttgtcatccatcccattcccccagacagcaagatagaaaaaac |
114 |
Q |
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| T |
42526103 |
gacatcagcaatcatgcaactcgcatatgcgcaaagattatttgagtaccatttttcttgtcatccatcccattcccccagacagcaagatagaaaaaac |
42526202 |
T |
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| Q |
115 |
atacacctttacatgttcaacgccaagcttcagccaactcggatcttgaatttattcgtccaataagagcaattcccctgttcttctc |
202 |
Q |
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| T |
42526203 |
atacacctttacatgttcaacgccaagcttcagccaactcggatcttgaatttattcgtccaataagagcaattcccctgttcttctc |
42526290 |
T |
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