View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8432_low_2 (Length: 334)

Name: NF8432_low_2
Description: NF8432
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8432_low_2
NF8432_low_2
[»] chr1 (34 HSPs)
chr1 (1-318)||(40397127-40397444)
chr1 (25-170)||(30677226-30677372)
chr1 (24-162)||(16539657-16539795)
chr1 (26-170)||(4621238-4621383)
chr1 (26-170)||(7766728-7766873)
chr1 (26-170)||(9500356-9500501)
chr1 (26-170)||(24122074-24122219)
chr1 (26-170)||(7197248-7197392)
chr1 (23-170)||(1486466-1486616)
chr1 (23-170)||(32729593-32729740)
chr1 (26-170)||(15059403-15059548)
chr1 (48-167)||(1378971-1379090)
chr1 (23-131)||(40802109-40802216)
chr1 (25-130)||(809272-809378)
chr1 (26-162)||(24674444-24674581)
chr1 (26-142)||(7946895-7947011)
chr1 (26-162)||(23734167-23734305)
chr1 (26-162)||(23741359-23741497)
chr1 (23-107)||(37047040-37047124)
chr1 (25-170)||(46607860-46608006)
chr1 (29-158)||(16899557-16899687)
chr1 (26-162)||(21726780-21726917)
chr1 (89-170)||(37351454-37351535)
chr1 (23-75)||(39012346-39012398)
chr1 (26-170)||(8254753-8254898)
chr1 (26-170)||(17935820-17935965)
chr1 (23-76)||(25237085-25237138)
chr1 (109-170)||(48699894-48699955)
chr1 (93-170)||(88499-88577)
chr1 (23-67)||(2537746-2537790)
chr1 (51-122)||(10059131-10059203)
chr1 (94-170)||(27159205-27159281)
chr1 (23-127)||(30951088-30951190)
chr1 (23-67)||(39964560-39964604)
[»] chr5 (30 HSPs)
chr5 (23-170)||(19145413-19145560)
chr5 (27-162)||(24158175-24158311)
chr5 (22-131)||(2499218-2499328)
chr5 (26-170)||(8484662-8484807)
chr5 (26-170)||(19456212-19456355)
chr5 (25-170)||(32059441-32059587)
chr5 (26-170)||(7085627-7085772)
chr5 (26-170)||(18207258-18207403)
chr5 (26-170)||(27498732-27498877)
chr5 (26-162)||(38684259-38684395)
chr5 (26-170)||(11926502-11926648)
chr5 (89-162)||(10869574-10869648)
chr5 (26-170)||(15641107-15641251)
chr5 (50-170)||(21236363-21236484)
chr5 (26-170)||(30485879-30486024)
chr5 (89-170)||(41351105-41351186)
chr5 (48-170)||(4603850-4603973)
chr5 (25-170)||(12398449-12398595)
chr5 (92-157)||(21042588-21042653)
chr5 (110-170)||(25750614-25750674)
chr5 (26-162)||(27487563-27487701)
chr5 (25-170)||(26009265-26009411)
chr5 (25-170)||(31287947-31288093)
chr5 (89-170)||(6014281-6014363)
chr5 (89-170)||(22392802-22392884)
chr5 (89-162)||(11464917-11464990)
chr5 (109-170)||(22693070-22693131)
chr5 (23-170)||(31206290-31206439)
chr5 (109-170)||(37495189-37495250)
chr5 (26-86)||(14302785-14302845)
[»] chr6 (22 HSPs)
chr6 (23-170)||(9208300-9208448)
chr6 (26-170)||(11448922-11449067)
chr6 (26-170)||(3222637-3222781)
chr6 (26-170)||(21148512-21148656)
chr6 (26-170)||(9239026-9239171)
chr6 (25-170)||(15360099-15360245)
chr6 (26-170)||(654147-654292)
chr6 (26-170)||(9843989-9844134)
chr6 (28-170)||(34147399-34147542)
chr6 (28-170)||(34160015-34160158)
chr6 (23-169)||(17149458-17149605)
chr6 (48-170)||(17225740-17225862)
chr6 (26-170)||(28672118-28672263)
chr6 (28-131)||(17081094-17081198)
chr6 (23-170)||(33499522-33499671)
chr6 (55-162)||(6164396-6164504)
chr6 (26-170)||(21982322-21982466)
chr6 (26-145)||(12390476-12390596)
chr6 (50-170)||(9690639-9690760)
chr6 (23-76)||(10377763-10377816)
chr6 (26-85)||(14212943-14213003)
chr6 (53-128)||(14504125-14504201)
[»] chr7 (37 HSPs)
chr7 (25-170)||(654706-654851)
chr7 (23-162)||(1766153-1766292)
chr7 (29-170)||(21835209-21835351)
chr7 (26-170)||(19421286-19421431)
chr7 (26-170)||(22119943-22120088)
chr7 (26-170)||(40542911-40543056)
chr7 (23-170)||(21574103-21574252)
chr7 (23-170)||(23330740-23330888)
chr7 (23-170)||(28647021-28647169)
chr7 (25-170)||(2751325-2751471)
chr7 (26-170)||(7275332-7275477)
chr7 (92-170)||(33137826-33137904)
chr7 (26-170)||(27704057-27704201)
chr7 (89-170)||(28089938-28090019)
chr7 (23-170)||(7262269-7262415)
chr7 (28-158)||(9718000-9718131)
chr7 (26-131)||(2103110-2103216)
chr7 (92-170)||(31197711-31197790)
chr7 (54-170)||(3851840-3851957)
chr7 (26-162)||(7175871-7176008)
chr7 (26-154)||(10091243-10091372)
chr7 (26-170)||(11997904-11998049)
chr7 (26-170)||(17196951-17197096)
chr7 (26-162)||(22703541-22703678)
chr7 (26-170)||(29861725-29861870)
chr7 (109-170)||(27312291-27312352)
chr7 (106-162)||(45046928-45046983)
chr7 (26-131)||(23012548-23012654)
chr7 (26-170)||(18044162-18044307)
chr7 (89-170)||(22638406-22638488)
chr7 (54-108)||(23636629-23636683)
chr7 (89-170)||(31712903-31712985)
chr7 (23-76)||(1469164-1469217)
chr7 (23-76)||(12211631-12211684)
chr7 (89-170)||(31274032-31274113)
chr7 (89-162)||(39145661-39145734)
chr7 (32-76)||(17279614-17279658)
[»] chr3 (36 HSPs)
chr3 (31-170)||(1178228-1178366)
chr3 (26-170)||(15566501-15566645)
chr3 (25-162)||(30257674-30257812)
chr3 (25-170)||(40133450-40133596)
chr3 (26-170)||(8456151-8456296)
chr3 (26-170)||(52821637-52821781)
chr3 (26-170)||(53424178-53424322)
chr3 (25-170)||(48977438-48977584)
chr3 (26-170)||(31537839-31537984)
chr3 (30-170)||(10190743-10190884)
chr3 (26-170)||(26174164-26174309)
chr3 (26-170)||(35492962-35493107)
chr3 (26-170)||(45529756-45529900)
chr3 (26-170)||(49258263-49258408)
chr3 (89-170)||(24165716-24165797)
chr3 (26-170)||(30807154-30807299)
chr3 (25-143)||(7470244-7470362)
chr3 (89-170)||(8097280-8097362)
chr3 (30-170)||(10083820-10083961)
chr3 (26-162)||(18176896-18177033)
chr3 (26-170)||(21362994-21363139)
chr3 (26-170)||(25289716-25289860)
chr3 (89-170)||(32151538-32151620)
chr3 (26-170)||(46576399-46576544)
chr3 (26-170)||(1692885-1693029)
chr3 (109-170)||(17579136-17579197)
chr3 (23-76)||(26158866-26158919)
chr3 (110-170)||(48105013-48105073)
chr3 (28-170)||(53233912-53234054)
chr3 (93-170)||(24407379-24407457)
chr3 (26-170)||(34492576-34492721)
chr3 (39-131)||(1242037-1242130)
chr3 (89-170)||(7485532-7485612)
chr3 (109-170)||(53848435-53848496)
chr3 (110-170)||(50731238-50731298)
chr3 (110-170)||(50781556-50781616)
[»] chr4 (29 HSPs)
chr4 (26-170)||(33696280-33696425)
chr4 (26-170)||(46714443-46714589)
chr4 (26-170)||(27528796-27528941)
chr4 (27-128)||(10125872-10125973)
chr4 (26-170)||(34844759-34844904)
chr4 (26-170)||(40058853-40058998)
chr4 (26-170)||(52983670-52983815)
chr4 (31-170)||(20566406-20566546)
chr4 (23-107)||(37455625-37455708)
chr4 (48-170)||(28791188-28791310)
chr4 (26-170)||(32986248-32986393)
chr4 (27-170)||(5609203-5609347)
chr4 (26-169)||(20077986-20078130)
chr4 (28-158)||(13584267-13584398)
chr4 (89-170)||(40252403-40252485)
chr4 (93-166)||(42135337-42135410)
chr4 (25-170)||(7391966-7392110)
chr4 (33-162)||(25969512-25969639)
chr4 (28-131)||(32990488-32990592)
chr4 (25-170)||(25852264-25852411)
chr4 (25-145)||(34835579-34835700)
chr4 (25-170)||(12500060-12500205)
chr4 (36-162)||(13716459-13716586)
chr4 (92-170)||(45302953-45303032)
chr4 (25-162)||(54127351-54127489)
chr4 (50-162)||(12824475-12824588)
chr4 (93-170)||(44343632-44343710)
chr4 (26-164)||(9517648-9517787)
chr4 (114-170)||(43352340-43352396)
[»] chr8 (30 HSPs)
chr8 (29-170)||(8765527-8765669)
chr8 (26-170)||(4718700-4718845)
chr8 (22-170)||(18128564-18128713)
chr8 (26-170)||(21603285-21603430)
chr8 (26-170)||(28193529-28193674)
chr8 (26-170)||(34237656-34237801)
chr8 (23-131)||(3403542-3403651)
chr8 (23-131)||(26168889-26168997)
chr8 (31-159)||(28908883-28909012)
chr8 (25-170)||(3734624-3734770)
chr8 (26-163)||(28088341-28088479)
chr8 (26-162)||(39349311-39349448)
chr8 (50-162)||(39317099-39317211)
chr8 (89-170)||(2639412-2639494)
chr8 (26-170)||(15259407-15259552)
chr8 (26-129)||(18532162-18532266)
chr8 (25-117)||(27746390-27746482)
chr8 (23-76)||(41070813-41070866)
chr8 (64-152)||(20505646-20505734)
chr8 (25-170)||(6953009-6953154)
chr8 (25-170)||(20305962-20306108)
chr8 (25-170)||(21092595-21092741)
chr8 (26-170)||(4698724-4698869)
chr8 (112-170)||(34694576-34694634)
chr8 (22-103)||(21239400-21239481)
chr8 (89-145)||(2166815-2166871)
chr8 (26-170)||(19471664-19471810)
chr8 (26-170)||(19542588-19542734)
chr8 (26-170)||(19589962-19590108)
chr8 (110-170)||(24018523-24018583)
[»] chr2 (24 HSPs)
chr2 (23-170)||(8192353-8192500)
chr2 (25-170)||(15038009-15038155)
chr2 (26-170)||(44946054-44946199)
chr2 (26-170)||(17324817-17324960)
chr2 (25-131)||(5394067-5394174)
chr2 (89-170)||(31778145-31778227)
chr2 (26-170)||(33827574-33827719)
chr2 (26-170)||(35171851-35171996)
chr2 (89-170)||(41329956-41330038)
chr2 (69-170)||(6006891-6006992)
chr2 (23-145)||(26176224-26176346)
chr2 (26-170)||(2140487-2140629)
chr2 (109-170)||(28194139-28194200)
chr2 (92-170)||(44610156-44610235)
chr2 (92-162)||(34516423-34516493)
chr2 (89-170)||(13266604-13266685)
chr2 (105-170)||(14486956-14487021)
chr2 (23-103)||(4618754-4618834)
chr2 (89-170)||(11941211-11941293)
chr2 (24-101)||(13747576-13747653)
chr2 (26-142)||(41314043-41314159)
chr2 (26-145)||(24196055-24196173)
chr2 (89-170)||(25293272-25293355)
chr2 (23-131)||(29698195-29698303)
[»] scaffold0576 (1 HSPs)
scaffold0576 (25-170)||(5083-5229)
[»] scaffold0070 (1 HSPs)
scaffold0070 (26-170)||(40376-40520)
[»] scaffold0019 (1 HSPs)
scaffold0019 (26-170)||(161860-162005)
[»] scaffold0217 (1 HSPs)
scaffold0217 (29-162)||(7318-7452)
[»] scaffold1175 (1 HSPs)
scaffold1175 (89-170)||(2427-2509)
[»] scaffold0102 (1 HSPs)
scaffold0102 (26-170)||(39143-39288)
[»] scaffold0160 (1 HSPs)
scaffold0160 (23-170)||(29144-29291)
[»] scaffold0623 (1 HSPs)
scaffold0623 (26-170)||(1058-1202)
[»] scaffold0366 (2 HSPs)
scaffold0366 (26-170)||(9301-9445)
scaffold0366 (26-131)||(12041-12146)
[»] scaffold0049 (1 HSPs)
scaffold0049 (89-170)||(66868-66950)
[»] scaffold0459 (1 HSPs)
scaffold0459 (26-170)||(10696-10839)
[»] scaffold0157 (1 HSPs)
scaffold0157 (25-170)||(20272-20417)
[»] scaffold0051 (1 HSPs)
scaffold0051 (31-170)||(52872-53012)
[»] scaffold0026 (1 HSPs)
scaffold0026 (25-131)||(97406-97513)


Alignment Details
Target: chr1 (Bit Score: 261; Significance: 1e-145; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 1 - 318
Target Start/End: Complemental strand, 40397444 - 40397127
Alignment:
Q  1 caacagtttctcattaacatgttcaaggtctcaggtttgattccccttggtgtcaatttcgatgggcaagtccatatagacctttgtcctggctttaaat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40397444 caacagtttctcattaacatgttcaaggtctcaggtttgattccccttggtgtcaatttcgatgggcaagtccatatagacctttgtcctggctttaaat 40397345  T
Q  101 ggggccctgcaagtgggcggtgagattggtctcgtcagattagtctgttcttgaatcggatatcgagtttnnnnnnntgttaatcttgataattatatgg 200  Q
    |||||||||||||  |||  |||||||||||||||| ||||| ||||||||||||||||||| |||||||       |||||||||||||||||||||||    
T  40397344 ggggccctgcaaggcggcaatgagattggtctcgtcggattaatctgttcttgaatcggataccgagtttaaaaaaatgttaatcttgataattatatgg 40397245  T
Q  201 cgattccaacttaggagtgtagataaattttacaattaacgtatgtttgatttattatatttagggtaatatctcaaatagcctctgtataattatcaag 300  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  40397244 caattccaacttaggagtgtagataaattttacaattaacgtatgtttgatttattatatttagggtaatatctcaaatagcccctgtataattatcaag 40397145  T
Q  301 ataatctctgaacaaaag 318  Q
    ||||||||||||||||||    
T  40397144 ataatctctgaacaaaag 40397127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 25 - 170
Target Start/End: Original strand, 30677226 - 30677372
Alignment:
Q  25 aaggtctcaggtttgattccccttggtgtcaatttcgatgggc-aagtccatatagacctttgtcctggctttaaatggggccct-gcaagtgggcggtg 122  Q
    |||||||||||||||||||||  ||||| |||||||| ||||| ||||||||| ||| |||  |  |||||||||||||| |||  ||||||||||||||    
T  30677226 aaggtctcaggtttgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctt-tggctttaaatgggacccccgcaagtgggcggtg 30677324  T
Q  123 agattggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
     |||||||| | ||||||||||| ||||||| | ||||||||||||||    
T  30677325 ggattggtcccctcagattagtcggttcttggaccggatatcgagttt 30677372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 24 - 162
Target Start/End: Original strand, 16539657 - 16539795
Alignment:
Q  24 caaggtctcaggtttgattccccttggtgtcaatttcgatgggcaagtccatatagacctttgtcctggctttaaatggggccctgcaagtgggcggtga 123  Q
    ||||||||||||||||||||||  ||||| |||||| | |||||||||||||| ||| |||||  |||||||  || ||||||||| ||||||| ||||     
T  16539657 caaggtctcaggtttgattccctctggtgccaattttggtgggcaagtccatacagagctttgcgctggcttagaacggggccctgtaagtgggtggtgg 16539756  T
Q  124 gattggtctcgtcagattagtctgttcttgaatcggata 162  Q
    |||||||| | ||| |||||||  | |||| ||||||||    
T  16539757 gattggtcccctcaaattagtcgatacttgtatcggata 16539795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 26 - 170
Target Start/End: Complemental strand, 4621383 - 4621238
Alignment:
Q  26 aggtctcaggtttgattccccttggtgtcaatttcgatgggc-aagtccatatagacctttgtcctggctttaaatgggg-ccctgcaagtgggcggtga 123  Q
    |||||||||||| |||||||  ||||| |||||||| ||||| ||||||||| ||| |||  || |||||||||| |||| ||| ||||||||||||||     
T  4621383 aggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctc-tggctttaaacggggtccccgcaagtgggcggtgg 4621285  T
Q  124 gattggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
    |||||||| | || ||||||||  |||||| |||||||| |||||||    
T  4621284 gattggtcccctcggattagtcgattcttggatcggataccgagttt 4621238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 26 - 170
Target Start/End: Complemental strand, 7766873 - 7766728
Alignment:
Q  26 aggtctcaggtttgattccccttggtgtcaatttcgatgggc-aagtccatatagacctttgtcctggctttaaatggggccct-gcaagtgggcggtga 123  Q
    |||||||||||| |||||||  |||||  ||||||| ||||| ||||||||| ||| |||  || || ||||||| |||||||  ||||||||||||||     
T  7766873 aggtctcaggttcgattccctctggtgctaatttcggtgggctaagtccatacagagcttgctc-tgactttaaacggggcccccgcaagtgggcggtgg 7766775  T
Q  124 gattggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
    |||||||| | || ||||||||  |||||||||||||||||||||||    
T  7766774 gattggtcccctcggattagtcgattcttgaatcggatatcgagttt 7766728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 26 - 170
Target Start/End: Complemental strand, 9500501 - 9500356
Alignment:
Q  26 aggtctcaggtttgattccccttggtgtcaatttcgatgggc-aagtccatatagacctttgtcctggctttaaatggggccctg-caagtgggcggtga 123  Q
    |||||||||||| ||||| |  ||||| |||||||| ||||| ||||||||| ||| |||  || |||||||||| || ||||   ||||||||||||||    
T  9500501 aggtctcaggttcgattctctctggtgccaatttcggtgggctaagtccatacagagcttgctc-tggctttaaacggagcccccacaagtgggcggtga 9500403  T
Q  124 gattggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
    |||||||||| || ||||||||  |||||| ||||||||||||||||    
T  9500402 gattggtctcttcggattagtcgattcttggatcggatatcgagttt 9500356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 26 - 170
Target Start/End: Original strand, 24122074 - 24122219
Alignment:
Q  26 aggtctcaggtttgattccccttggtgtcaatttcgatgggc-aagtccatatagacctttgtcctggctttaaatggggc-cctgcaagtgggcggtga 123  Q
    |||||||||||| |||||||  ||||| |||||||| ||||| ||||||||| ||| |||  || |||||||||| ||||| || ||||||||||||||     
T  24122074 aggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctc-tggctttaaacggggctcccgcaagtgggcggtgg 24122172  T
Q  124 gattggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
    |||||||| | || ||||||||  |||||| |||||||| |||||||    
T  24122173 gattggtcccctcggattagtcgattcttggatcggataccgagttt 24122219  T

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Target: chr1; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 26 - 170
Target Start/End: Complemental strand, 7197392 - 7197248
Alignment:
Q  26 aggtctcaggtttgattccccttggtgtcaatttcgatgggcaagtccatatagacctttgtcctggctttaaatggggccc-tgcaagtgggcggtgag 124  Q
    |||||||||||| |||||||  || || |||||||| |||| ||||| ||| |||||||  || |||||||||| | ||||| |||||||||||||||||    
T  7197392 aggtctcaggttcgattccctctgatgccaatttcggtgggtaagtcaatacagaccttgctc-tggctttaaacgaggcccctgcaagtgggcggtgag 7197294  T
Q  125 attggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
    ||||||| | || ||||||||  ||| || |||||||| |||||||    
T  7197293 attggtcccctcggattagtcgattcatggatcggataccgagttt 7197248  T

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Target: chr1; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 23 - 170
Target Start/End: Original strand, 1486466 - 1486616
Alignment:
Q  23 tcaaggtctcaggtttgattccccttggtgtcaatttcgatgggcaagtccatatagacctttgtcctggctttaaatgggg---ccctgcaagtgggcg 119  Q
    ||||||||||||||| ||||||| |||||| ||||||||||||| ||||||||| ||| |||||  ||| |||  || ||||   ||| |||||||| ||    
T  1486466 tcaaggtctcaggttcgattccctttggtgccaatttcgatgggtaagtccatacagagctttgctctgacttagaacggggcccccccgcaagtggacg 1486565  T
Q  120 gtgagattggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
    ||| ||| |||| | || |||||||| || |||| |||||||| |||||||    
T  1486566 gtgggatcggtcccctccgattagtcggtccttggatcggataccgagttt 1486616  T

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Target: chr1; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 23 - 170
Target Start/End: Original strand, 32729593 - 32729740
Alignment:
Q  23 tcaaggtctcaggtttgattccccttggtgtcaatttcgatgggcaagtccatatagacctttgtcctggctttaaatgggg-ccctgcaagtgggcggt 121  Q
    |||| |||||||||| |||||||  ||||| |||||||| |||||||||||||| ||| | |||  |||||||||||||||| ||| |||||||||||||    
T  32729593 tcaaagtctcaggttcgattccctatggtgccaatttcggtgggcaagtccatacagagc-ttgctctggctttaaatggggtccccgcaagtgggcggt 32729691  T
Q  122 gagattggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
    | ||||| || | |  |||||||| ||  ||| |||||||| |||||||    
T  32729692 gggattgatccccttggattagtcggtctttggatcggataccgagttt 32729740  T

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Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 26 - 170
Target Start/End: Complemental strand, 15059548 - 15059403
Alignment:
Q  26 aggtctcaggtttgattccccttggtgtcaatttcgatgggc-aagtccatatagacctttgtcctggctttaaatgggg-ccctgcaagtgggcggtga 123  Q
    |||||||||||| ||||| |  ||||| |||||||| ||||| ||||||||| ||| |||  || |||||||||| |||| ||| |||||||||||||||    
T  15059548 aggtctcaggttcgattctctctggtgccaatttcggtgggctaagtccatacagagcttgctc-tggctttaaacggggtccccgcaagtgggcggtga 15059450  T
Q  124 gattggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
    |||||||| | ||  |||||||  |||||| |||||||| |||||||    
T  15059449 gattggtcccctcgaattagtcgattcttggatcggataccgagttt 15059403  T

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Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 48 - 167
Target Start/End: Original strand, 1378971 - 1379090
Alignment:
Q  48 tggtgtcaatttcgatgggc-aagtccatatagacctttgtcctggctttaaatggggccctgcaagtgggcggtgagattggtctcgtcagattagtct 146  Q
    |||||||||||||| ||||| ||||||||| ||| |||  || |||||||||| ||| ||| |||||||| |||||||||||||| | |||||||||||     
T  1378971 tggtgtcaatttcggtgggctaagtccatacagaacttgctc-tggctttaaacgggcccccgcaagtggacggtgagattggtcccctcagattagtcg 1379069  T
Q  147 gttcttgaatcggatatcgag 167  Q
     |||||  |||||||| ||||    
T  1379070 attcttagatcggataccgag 1379090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 23 - 131
Target Start/End: Complemental strand, 40802216 - 40802109
Alignment:
Q  23 tcaaggtctcaggtttgattccccttggtgtcaatttcgatgggcaagtccatatagacctttgtcctggctttaaatggggccctgcaagtgggcggtg 122  Q
    ||||||||||| ||||||||| || ||||| |||||| |||| ||||||||||| ||| | |||  ||| ||||||| ||| ||| ||||||||| ||||    
T  40802216 tcaaggtctcatgtttgattctccatggtgccaattttgatgagcaagtccatacagagc-ttgctctgactttaaacgggtccccgcaagtgggtggtg 40802118  T
Q  123 agattggtc 131  Q
    |||||||||    
T  40802117 agattggtc 40802109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 25 - 130
Target Start/End: Original strand, 809272 - 809378
Alignment:
Q  25 aaggtctcaggtttgattccccttggtgtcaatttcgatgggcaagtccatatagacctttgtcctggctttaaatggggc-cctgcaagtgggcggtga 123  Q
    |||||||||||||||||| ||| | |||||||||||| |||||||||||||| | | | |||  |||||||| ||||||||   ||||| |||||||||     
T  809272 aaggtctcaggtttgattacccctagtgtcaatttcggtgggcaagtccatacaaagccttgatctggctttgaatggggcatttgcaaatgggcggtgg 809371  T
Q  124 gattggt 130  Q
    |||||||    
T  809372 gattggt 809378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 26 - 162
Target Start/End: Original strand, 24674444 - 24674581
Alignment:
Q  26 aggtctcaggtttgattccccttggtgtcaatttcgatgggc-aagtccatatagacctttgtcctggctttaaatgggg-ccctgcaagtgggcggtga 123  Q
    |||||||||||| |||||||  ||||| |||||||| ||||| ||||||||| ||| | |||  ||||||||||| |||| ||| ||||||||||||||     
T  24674444 aggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagc-ttgctctggctttaaacggggcccccgcaagtgggcggtgg 24674542  T
Q  124 gattggtctcgtcagattagtctgttcttgaatcggata 162  Q
    |||||||| | ||  |||||||  |||||| ||||||||    
T  24674543 gattggtcccctcgtattagtcgattcttggatcggata 24674581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 26 - 142
Target Start/End: Original strand, 7946895 - 7947011
Alignment:
Q  26 aggtctcaggtttgattccccttggtgtcaatttcgatgggc-aagtccatatagacctttgtcctggctttaaatggggccctgcaagtgggcggtgag 124  Q
    |||||||| ||| |||||||  ||||| |||||||| ||||| ||||| ||| ||| |||  || | |||||||||||||||| ||||||||| ||||||    
T  7946895 aggtctcaagttcgattccctctggtgccaatttcggtgggctaagtctatacagagcttgctc-tcgctttaaatggggccccgcaagtgggtggtgag 7946993  T
Q  125 attggtctcgtcagatta 142  Q
    ||||||| | ||||||||    
T  7946994 attggtcccctcagatta 7947011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 26 - 162
Target Start/End: Original strand, 23734167 - 23734305
Alignment:
Q  26 aggtctcaggtttgattccccttggtgtcaatttcgatgggc-aagtccatatagacctttgtcctggctttaaatggggccct--gcaagtgggcggtg 122  Q
    |||||||||||| |||||||  || || |||||||| ||||| ||||||||| |||  ||||   || ||||||| |||||||   ||||||||||||||    
T  23734167 aggtctcaggttcgattccctctgatgccaatttcggtgggctaagtccatacagag-tttgctatgcctttaaacggggccccccgcaagtgggcggtg 23734265  T
Q  123 agattggtctcgtcagattagtctgttcttgaatcggata 162  Q
    | ||||||| | |||||||||||  |||||||||||||||    
T  23734266 aaattggtcccctcagattagtcgattcttgaatcggata 23734305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 26 - 162
Target Start/End: Original strand, 23741359 - 23741497
Alignment:
Q  26 aggtctcaggtttgattccccttggtgtcaatttcgatgggc-aagtccatatagacctttgtcctggctttaaatggggccct--gcaagtgggcggtg 122  Q
    |||||||||||| |||||||  || || |||||||| ||||| ||||||||| |||  ||||   || ||||||| |||||||   ||||||||||||||    
T  23741359 aggtctcaggttcgattccctctgatgccaatttcggtgggctaagtccatacagag-tttgctatgcctttaaacggggccccccgcaagtgggcggtg 23741457  T
Q  123 agattggtctcgtcagattagtctgttcttgaatcggata 162  Q
    | ||||||| | |||||||||||  |||||||||||||||    
T  23741458 aaattggtcccctcagattagtcgattcttgaatcggata 23741497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 23 - 107
Target Start/End: Original strand, 37047040 - 37047124
Alignment:
Q  23 tcaaggtctcaggtttgattccccttggtgtcaatttcgatgggcaagtccatatagacctttgtcctggctttaaatggggccc 107  Q
    |||||||||||||||||||||||| ||||   ||||| | ||||| |||||||| ||| |||||  || ||||||||||||||||    
T  37047040 tcaaggtctcaggtttgattccccctggtacaaattttggtgggctagtccatacagagctttgctctagctttaaatggggccc 37047124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 25 - 170
Target Start/End: Original strand, 46607860 - 46608006
Alignment:
Q  25 aaggtctcaggtttgattccccttggtgtcaatttcgatgggc-aagtccatatagacctttgtcctggctttaaatggggccct-gcaagtgggcggtg 122  Q
    ||||||||||||| |||||||  ||||| |||||||| ||||| ||||||||| ||| |||  || || ||||||| ||  |||  ||||||||||||||    
T  46607860 aaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctc-tgactttaaaaggcccccccgcaagtgggcggtg 46607958  T
Q  123 agattggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
     ||||| || | || |||||||| || |||| ||||||||||||||||    
T  46607959 ggattgatcccctcggattagtcggtccttggatcggatatcgagttt 46608006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 158
Target Start/End: Original strand, 16899557 - 16899687
Alignment:
Q  29 tctcaggtttgattccccttggtgtcaatttcgatgggcaagtccatatagacctttgtcctggctttaaatggggccc-tgcaagtgggcggtgagatt 127  Q
    ||||||||| |||||||  ||||| |||||||| ||||| |||||||| | | |||||  |||| ||  || ||||||| ||||||||| ||||||||||    
T  16899557 tctcaggttcgattccctctggtgccaatttcggtgggccagtccatacaaagctttgctctggtttagaacggggcccctgcaagtggacggtgagatt 16899656  T
Q  128 ggtctcgtcagattagtctgttcttgaatcg 158  Q
    |||| | || |||||||| || |||| ||||    
T  16899657 ggtcccctcggattagtcggtccttggatcg 16899687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 162
Target Start/End: Original strand, 21726780 - 21726917
Alignment:
Q  26 aggtctcaggtttgattccccttggtgtcaatttcgatggg-caagtccatatagacctttgtcctggctttaaatggg-gccctgcaagtgggcggtga 123  Q
    |||||||||||| ||||||| |||||| |||||||||||||  ||||||||||||| | |||| || |||||||| |||  |||  |||||||||||||     
T  21726780 aggtctcaggttcgattccctttggtgccaatttcgatgggttaagtccatatagagc-ttgttctagctttaaacgggtcccccacaagtgggcggtgg 21726878  T
Q  124 gattggtctcgtcagattagtctgttcttgaatcggata 162  Q
    | ||| || | |||||||| ||  |||||| ||||||||    
T  21726879 ggttgatcccctcagattaatcgattcttggatcggata 21726917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 89 - 170
Target Start/End: Complemental strand, 37351535 - 37351454
Alignment:
Q  89 ctggctttaaatggggccctgcaagtgggcggtgagattggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
    ||||||||||| ||| |||  ||||||||||||| |||||||| | || |||||||| || |||| |||||||| |||||||    
T  37351535 ctggctttaaacgggcccccacaagtgggcggtgggattggtcccctcggattagtcggtccttggatcggataccgagttt 37351454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 75
Target Start/End: Original strand, 39012346 - 39012398
Alignment:
Q  23 tcaaggtctcaggtttgattccccttggtgtcaatttcgatgggcaagtccat 75  Q
    ||||||||| ||||||||||||||| |||| |||||||| ||||| |||||||    
T  39012346 tcaaggtcttaggtttgattcccctcggtgccaatttcggtgggctagtccat 39012398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 170
Target Start/End: Complemental strand, 8254898 - 8254753
Alignment:
Q  26 aggtctcaggtttgattccccttggtgtcaatttcgatgggc-aagtccatatagacctttgtcctggctttaaatggggccct-gcaagtgggcggtga 123  Q
    |||||||||||| ||||  |  |||||||||||||| ||||| |||| |||| ||| |||  || |||||||||| |||||||  ||||||||||||||     
T  8254898 aggtctcaggttcgattatctctggtgtcaatttcggtgggctaagttcatacagaacttgctc-tggctttaaacggggcccccgcaagtgggcggtgg 8254800  T
Q  124 gattggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
    ||||| || | |   |||||||  ||||||||||||||| |||||||    
T  8254799 gattgatccccttgaattagtcgattcttgaatcggataccgagttt 8254753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 170
Target Start/End: Original strand, 17935820 - 17935965
Alignment:
Q  26 aggtctcaggtttgattccccttggtgtcaatttcgatgggc-aagtccatatagacctttgtcctggctttaaatggggccct-gcaagtgggcggtga 123  Q
    |||||||||||| ||||||   | ||| |||||||| ||||| ||||||||| |||  ||||  ||||||||||| |||||||  ||||||||||| ||     
T  17935820 aggtctcaggttcgattccttctagtgccaatttcggtgggctaagtccatacagag-tttgctctggctttaaacggggcccccgcaagtgggcgatgg 17935918  T
Q  124 gattggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
    ||||||||   || ||||||||  |||||| |||||||| |||||||    
T  17935919 gattggtccactcggattagtcgattcttggatcggataccgagttt 17935965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 76
Target Start/End: Complemental strand, 25237138 - 25237085
Alignment:
Q  23 tcaaggtctcaggtttgattccccttggtgtcaatttcgatgggcaagtccata 76  Q
    ||||||||||||||| |||||||  | ||| |||||||| ||||||||||||||    
T  25237138 tcaaggtctcaggttcgattccctctagtgccaatttcggtgggcaagtccata 25237085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 109 - 170
Target Start/End: Original strand, 48699894 - 48699955
Alignment:
Q  109 gcaagtgggcggtgagattggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
    |||||||||||||| ||||| || | || ||||||||  |||||| ||||||||||||||||    
T  48699894 gcaagtgggcggtgggattgttcccttcggattagtcgattcttggatcggatatcgagttt 48699955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 93 - 170
Target Start/End: Original strand, 88499 - 88577
Alignment:
Q  93 ctttaaatggggc-cctgcaagtgggcggtgagattggt-ctcgtcagattagtctgttct-tgaatcggatatcgagttt 170  Q
    ||||||||||||| || |||||||||||||| ||||||| ||| ||||||||||| | ||| |||||||||||||||||||    
T  88499 ctttaaatggggctccagcaagtgggcggtgtgattggttctc-tcagattagtc-gatctatgaatcggatatcgagttt 88577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 23 - 67
Target Start/End: Original strand, 2537746 - 2537790
Alignment:
Q  23 tcaaggtctcaggtttgattccccttggtgtcaatttcgatgggc 67  Q
    ||||||||||||||||||||||  |||||| |||||||| |||||    
T  2537746 tcaaggtctcaggtttgattccatttggtgccaatttcggtgggc 2537790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 51 - 122
Target Start/End: Original strand, 10059131 - 10059203
Alignment:
Q  51 tgtcaatttcgatgggcaagtccatatagacctttgtcctggctttaaatggggc-cctgcaagtgggcggtg 122  Q
    ||||||||||||||||||||| |||| |||  |||||  |||||||||| || || ||||||||||| |||||    
T  10059131 tgtcaatttcgatgggcaagttcatacagagttttgttttggctttaaacggagctcctgcaagtggacggtg 10059203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 94 - 170
Target Start/End: Original strand, 27159205 - 27159281
Alignment:
Q  94 tttaaatggggccctgcaagtgggcggtgagattggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
    |||||| ||| ||| |||||||| ||||| |||||||| | |||||||||||  |  ||| ||||||||||||||||    
T  27159205 tttaaacgggcccccgcaagtggacggtgggattggtcccctcagattagtcgatctttggatcggatatcgagttt 27159281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 23 - 127
Target Start/End: Complemental strand, 30951190 - 30951088
Alignment:
Q  23 tcaaggtctcaggtttgattccccttggtgtcaatttcgatgggcaagtccatatagacctttgtcctggctttaaatggggccctgcaagtgggcggtg 122  Q
    ||||||||||| ||| ||||| | || ||| |||||||||||||  |||| ||||||| |||||| ||||| |||||||||| || || ||||| |||||    
T  30951190 tcaaggtctcaagttcgattctc-ttagtggcaatttcgatgggttagtctatatagagctttgttctggc-ttaaatggggtcccgcgagtggacggtg 30951093  T
Q  123 agatt 127  Q
     ||||    
T  30951092 ggatt 30951088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 23 - 67
Target Start/End: Original strand, 39964560 - 39964604
Alignment:
Q  23 tcaaggtctcaggtttgattccccttggtgtcaatttcgatgggc 67  Q
    |||||||||||||||||||||||  ||||| |||||||| |||||    
T  39964560 tcaaggtctcaggtttgattccctctggtgccaatttcggtgggc 39964604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 64; Significance: 6e-28; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 23 - 170
Target Start/End: Complemental strand, 19145560 - 19145413
Alignment:
Q  23 tcaaggtctcaggtttgattccccttggtgtcaatttcgatgggcaagtccatatagacctttgtcctggctttaaatggggccctgcaagtgggcggtg 122  Q
    |||||||||| |||| |||||||  ||||| |||||||| |||||||||||||| ||| |||||  ||||||||||||||  ||| ||||||||||||||    
T  19145560 tcaaggtctccggttcgattccctctggtgccaatttcggtgggcaagtccatacagagctttgctctggctttaaatggtcccccgcaagtgggcggtg 19145461  T
Q  123 agattggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
     |||||||| | || |||||||  ||||||| |||||||| |||||||    
T  19145460 ggattggtcccctcggattagttggttcttggatcggataccgagttt 19145413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 27 - 162
Target Start/End: Complemental strand, 24158311 - 24158175
Alignment:
Q  27 ggtctcaggtttgattccccttggtgtcaatttcgatgggcaagtccatatagacctttgtcctggctttaaatggggcc-ctgcaagtgggcggtgaga 125  Q
    ||||||||||| ||||||   ||||||||||||||||||| ||||||||| | | ||||   |||||||  || |||||| |||||||||||||||||||    
T  24158311 ggtctcaggttcgattccttctggtgtcaatttcgatgggtaagtccatacatagctttactctggcttagaacggggcctctgcaagtgggcggtgaga 24158212  T
Q  126 ttggtctcgtcagattagtctgttcttgaatcggata 162  Q
    |||||| | ||||||||||| || |||||||||||||    
T  24158211 ttggtcccctcagattagtcggtccttgaatcggata 24158175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 22 - 131
Target Start/End: Complemental strand, 2499328 - 2499218
Alignment:
Q  22 ttcaaggtctcaggtttgattccccttggtgtcaatttcgatgggcaagtccatatagacctttgtcctggctttaaatggggccc-tgcaagtgggcgg 120  Q
    ||||| |||||||||| ||||| || || |||||||||||||||||||||||||||||| | ||   ||||||||||||||| ||| || |||||| |||    
T  2499328 ttcaaagtctcaggttcgattctccctgttgtcaatttcgatgggcaagtccatatagagccttactctggctttaaatgggacccttgaaagtggacgg 2499229  T
Q  121 tgagattggtc 131  Q
    |||||||||||    
T  2499228 tgagattggtc 2499218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 26 - 170
Target Start/End: Complemental strand, 8484807 - 8484662
Alignment:
Q  26 aggtctcaggtttgattccccttggtgtcaatttcgatgggc-aagtccatatagacctttgtcctggctttaaatggggccct-gcaagtgggcggtga 123  Q
    ||||||||||||||||||||  ||||| |||||||| ||||| |||| |||| ||| |||  || |||||||||| |||||||  ||||||||||||||     
T  8484807 aggtctcaggtttgattccctctggtgccaatttcggtgggctaagttcatacagagcttgctc-tggctttaaacggggcccccgcaagtgggcggtgg 8484709  T
Q  124 gattggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
    |||||||| | || ||||||||  |||||| |||||||| |||||||    
T  8484708 gattggtcccctcggattagtcgattcttggatcggataccgagttt 8484662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 26 - 170
Target Start/End: Complemental strand, 19456355 - 19456212
Alignment:
Q  26 aggtctcaggtttgattccccttggtgtcaatttcgatgggc-aagtccatatagacctttgtcctggctttaaatggggccctgcaagtgggcggtgag 124  Q
    |||||||||||| ||| || || |||| |||||||| ||||| ||||||||| ||| |||  || |||||||||| ||||||| |||||||||||||| |    
T  19456355 aggtctcaggttcgatccctct-ggtgccaatttcggtgggctaagtccatacagagcttgctc-tggctttaaacggggccccgcaagtgggcggtggg 19456258  T
Q  125 attggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
    ||||||| | || ||||||||  |||||| |||||||| |||||||    
T  19456257 attggtcccctcggattagtcgattcttggatcggataccgagttt 19456212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 25 - 170
Target Start/End: Complemental strand, 32059587 - 32059441
Alignment:
Q  25 aaggtctcaggtttgattccccttggtgtcaatttcgatgggc-aagtccatatagacctttgtcctggctttaaatggggccct-gcaagtgggcggtg 122  Q
    ||||||||||||| ||||||   ||||| |||||||| ||||| ||||||||| ||| |||  || |||||||||| |||||||  ||||||||||||||    
T  32059587 aaggtctcaggttcgattccttctggtgccaatttcggtgggctaagtccatacagagcttgctc-tggctttaaacggggcccccgcaagtgggcggtg 32059489  T
Q  123 agattggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
     |||||||| | || |||||||| || |||| |||||||| |||||||    
T  32059488 ggattggtcccctcggattagtcggtccttggatcggataccgagttt 32059441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 26 - 170
Target Start/End: Complemental strand, 7085772 - 7085627
Alignment:
Q  26 aggtctcaggtttgattccccttggtgtcaatttcgatgggc-aagtccatatagacctttgtcctggctttaaatgggg-ccctgcaagtgggcggtga 123  Q
    ||||||| |||| |||||||  | |||||||||||| ||||| ||||||||| ||| |||  || || ||||||| |||| ||| ||||||||||||||     
T  7085772 aggtctccggttcgattccctctagtgtcaatttcggtgggctaagtccatacagagcttgctc-tgactttaaacggggtccccgcaagtgggcggtgg 7085674  T
Q  124 gattggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
    |||||||| | || ||||||||  ||||||||||||||| |||||||    
T  7085673 gattggtcccctcggattagtcgattcttgaatcggataccgagttt 7085627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 26 - 170
Target Start/End: Original strand, 18207258 - 18207403
Alignment:
Q  26 aggtctcaggtttgattccccttggtgtcaatttcgatgggc-aagtccatatagacctttgtcctggctttaaatggggccct-gcaagtgggcggtga 123  Q
    |||||||||||| |||||||   |||| |||||||| ||||| ||||||||| ||| ||| || ||||||||||| | |||||  ||||||||||||||     
T  18207258 aggtctcaggttcgattccctccggtgccaatttcggtgggctaagtccatacagagctt-gttctggctttaaacgaggcccccgcaagtgggcggtgg 18207356  T
Q  124 gattggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
    |||||||| | || ||||||||  |||||| |||||||| |||||||    
T  18207357 gattggtcccctcggattagtcgattcttggatcggataccgagttt 18207403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 26 - 170
Target Start/End: Complemental strand, 27498877 - 27498732
Alignment:
Q  26 aggtctcaggtttgattccccttggtgtcaatttcgatgggc-aagtccatatagacctttgtcctggctttaaatgggg-ccctgcaagtgggcggtga 123  Q
    |||||||||||| |||||||  ||||| |||||||| ||||| ||||||||| | | | |||  ||||||||||| |||| ||| ||||||||||||||     
T  27498877 aggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacatagc-ttgctctggctttaaacggggcccccgcaagtgggcggtgg 27498779  T
Q  124 gattggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
    |||||||| | || ||||||||  |||||| |||||||| |||||||    
T  27498778 gattggtcccctcggattagtcgattcttggatcggataccgagttt 27498732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 26 - 162
Target Start/End: Original strand, 38684259 - 38684395
Alignment:
Q  26 aggtctcaggtttgattccccttggtgtcaatttcgatgggc-aagtccatatagacctttgtcctggctttaaatggggccctgcaagtgggcggtgag 124  Q
    |||||||||||| |||||||  ||||| |||||||| ||||| ||||||||| ||| |||  || |||||||||| ||| ||| ||||||| |||||| |    
T  38684259 aggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctc-tggctttaaacgggcccccgcaagtgagcggtggg 38684357  T
Q  125 attggtctcgtcagattagtctgttcttgaatcggata 162  Q
    ||||||| | || ||||||||  |||||| ||||||||    
T  38684358 attggtcccctcggattagtcgattcttggatcggata 38684395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 26 - 170
Target Start/End: Complemental strand, 11926648 - 11926502
Alignment:
Q  26 aggtctcaggtttgattccccttggtgtcaatttcgatgggc-aagtccatatagacctttgtcctggctttaaatgggg--ccctgcaagtgggcggtg 122  Q
    |||||||||||| |||||||  ||||| |||||||| ||||| ||||||||| ||| | |||  ||||||||||| ||||  ||| ||||||||| ||||    
T  11926648 aggtctcaggttagattccctctggtgccaatttcggtgggctaagtccatacagagc-ttgctctggctttaaacggggccccccgcaagtgggtggtg 11926550  T
Q  123 agattggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
     |||||||| | || ||||||||  |||||| |||||||| |||||||    
T  11926549 ggattggtcccctcggattagtcgattcttggatcggataccgagttt 11926502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 89 - 162
Target Start/End: Complemental strand, 10869648 - 10869574
Alignment:
Q  89 ctggctttaaatggggcc-ctgcaagtgggcggtgagattggtctcgtcagattagtctgttcttgaatcggata 162  Q
    |||||||||||||||||| | |||||||||||||| |||||||| | || |||||||| ||||||| ||||||||    
T  10869648 ctggctttaaatggggcctccgcaagtgggcggtgggattggtcccctcggattagtcggttcttggatcggata 10869574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 26 - 170
Target Start/End: Complemental strand, 15641251 - 15641107
Alignment:
Q  26 aggtctcaggtttgattccccttggtgtcaatttcgatgggc-aagtccatatagacctttgtcctggctttaaatggggccct-gcaagtgggcggtga 123  Q
    |||||||||||| |||||||  ||| | |||||||| ||||| ||||||||| ||| |||  || |||||||||| |||||||  ||||||||||||||     
T  15641251 aggtctcaggttcgattccctctggagccaatttcggtgggctaagtccatacagagcttgctc-tggctttaaacggggcccccgcaagtgggcggtgg 15641153  T
Q  124 gattggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
    |||||||| | || ||||||||  |||||| |||||||| |||||||    
T  15641152 gattggtcccctcggattagtcgattcttg-atcggataccgagttt 15641107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 50 - 170
Target Start/End: Complemental strand, 21236484 - 21236363
Alignment:
Q  50 gtgtcaatttcgatgggc-aagtccatatagacctttgtcctggctttaaatggggccct-gcaagtgggcggtgagattggtctcgtcagattagtctg 147  Q
    ||||||||||| |||||| ||||||||| |||  ||| || || ||||||| |||||||  |||||||||||||| |||| ||| | |||||||||||      
T  21236484 gtgtcaatttcaatgggctaagtccatacagagttttctc-tgactttaaacggggcccccgcaagtgggcggtgggattagtcccctcagattagtcga 21236386  T
Q  148 ttcttgaatcggatatcgagttt 170  Q
    ||||||||||||||| |||||||    
T  21236385 ttcttgaatcggataccgagttt 21236363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 26 - 170
Target Start/End: Original strand, 30485879 - 30486024
Alignment:
Q  26 aggtctcaggtttgattccccttggtgtcaatttcgatgggc-aagtccatatagacctttgtcctggctttaaatggggccct-gcaagtgggcggtga 123  Q
    |||||||||||| ||||| |  |||||||||||||| ||||| ||||||||| ||| |||  || |||||||||| |  ||||  ||||||||||||||     
T  30485879 aggtctcaggttcgattcactctggtgtcaatttcggtgggctaagtccatacagagcttgctc-tggctttaaacgatgcccccgcaagtgggcggtgg 30485977  T
Q  124 gattggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
    |||||||| | || ||||||||  |||||| |||||||| |||||||    
T  30485978 gattggtcccctcggattagtcaattcttggatcggataccgagttt 30486024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 89 - 170
Target Start/End: Complemental strand, 41351186 - 41351105
Alignment:
Q  89 ctggctttaaatggggccctgcaagtgggcggtgagattggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
    ||||||||||| ||||| | |||||||||||||| |||||||| | || ||||||||  |||||| |||||||| |||||||    
T  41351186 ctggctttaaacggggctccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttt 41351105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 48 - 170
Target Start/End: Original strand, 4603850 - 4603973
Alignment:
Q  48 tggtgtcaatttcgatgggc-aagtccatatagacctttgtcctggctttaaatgggg-ccctgcaagtgggcggtgagattggtctcgtcagattagtc 145  Q
    ||||| |||||||||||||| ||||||||| ||| | | |  ||||||||||| |||| |||||||||||| ||||| |||||||| | || ||||||||    
T  4603850 tggtgccaatttcgatgggctaagtccatacagagc-tcgctctggctttaaacggggcccctgcaagtggacggtgggattggtcccctcggattagtc 4603948  T
Q  146 tgttcttgaatcggatatcgagttt 170  Q
     || |||| |||||||| |||||||    
T  4603949 ggtccttggatcggataccgagttt 4603973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 25 - 170
Target Start/End: Complemental strand, 12398595 - 12398449
Alignment:
Q  25 aaggtctcaggtttgattccccttggtgtcaatttcgatgggc-aagtccatatagacctttgtcctggctttaaatgggg-ccctgcaagtgggcggtg 122  Q
    ||||||||||||| |||||||  |||||||||||||| ||| | |||| |||| ||| | |||  |||||||||||||||| ||| |||| ||| |||||    
T  12398595 aaggtctcaggttcgattccctatggtgtcaatttcggtggcctaagttcatacagagc-ttgctctggctttaaatggggcccccgcaaatggacggtg 12398497  T
Q  123 agattggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
    |||||| ||   ||| ||||||| ||||||| || ||||| |||||||    
T  12398496 agattgatcctctcaaattagtcggttcttggattggataccgagttt 12398449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 92 - 157
Target Start/End: Complemental strand, 21042653 - 21042588
Alignment:
Q  92 gctttaaatggggccctgcaagtgggcggtgagattggtctcgtcagattagtctgttcttgaatc 157  Q
    ||||||||||| |||| |||||||| |||||| ||||||| | ||| ||||||| |||||||||||    
T  21042653 gctttaaatggagccccgcaagtggacggtgaaattggtcccctcaaattagtcagttcttgaatc 21042588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 170
Target Start/End: Complemental strand, 25750674 - 25750614
Alignment:
Q  110 caagtgggcggtgagattggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
    |||||||| ||||||||||||| | |||||||||||  |||||| |||||||| |||||||    
T  25750674 caagtggggggtgagattggtcccttcagattagtcgattcttggatcggataccgagttt 25750614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 162
Target Start/End: Complemental strand, 27487701 - 27487563
Alignment:
Q  26 aggtctcaggtttgattccccttggtgtcaatttcgatgggc-aagtccatatagacctttgtcctggctttaaatggggccc--tgcaagtgggcggtg 122  Q
    |||||||||||||||| ||  |||||| |||||||| ||| | ||||||||| ||| |||  || | |||||||| |||| ||  |||||||||||||||    
T  27487701 aggtctcaggtttgatcccatttggtgccaatttcggtggactaagtccatacagagcttgctc-tagctttaaacgggggcccttgcaagtgggcggtg 27487603  T
Q  123 agattggtctcgtcagattagtctgttcttgaatcggata 162  Q
     |||||||| | || ||||||||  |||||| ||||||||    
T  27487602 ggattggtcccctcggattagtcgattcttggatcggata 27487563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 25 - 170
Target Start/End: Complemental strand, 26009411 - 26009265
Alignment:
Q  25 aaggtctcaggtttgattccccttggtgtcaatttcgatgggc-aagtccatatagacctttgtcctggctttaaatggggccct-gcaagtgggcggtg 122  Q
    ||||| || |||| ||||||| |||||| |||||||  ||||| ||||||||  ||| |||  || |||||||||| |||||||  |||||||||  |||    
T  26009411 aaggtttccggttcgattccctttggtgccaatttcagtgggctaagtccatgcagagcttactc-tggctttaaacggggcccccgcaagtgggtagtg 26009313  T
Q  123 agattggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
     |||| ||| | || |||||||| |||||||||||| |||||||||||    
T  26009312 ggattagtcccctcggattagtcggttcttgaatcgaatatcgagttt 26009265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 25 - 170
Target Start/End: Complemental strand, 31288093 - 31287947
Alignment:
Q  25 aaggtctcaggtttgattccccttggtgtcaatttcgatgggc-aagtccatatagacctttgtcctggctttaaatggggccct-gcaagtgggcggtg 122  Q
    ||||||||| ||| ||||||| |||||| |||||||| ||||  ||||||||| | | |||  |  || ||||||| |||||||  ||||||||||||||    
T  31288093 aaggtctcatgttcgattccctttggtgccaatttcggtgggttaagtccatacaaagcttgctt-tgactttaaacggggcccccgcaagtgggcggtg 31287995  T
Q  123 agattggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
     |||||||||| ||  ||||||| ||||||| | |||||| |||||||    
T  31287994 ggattggtctcctcgaattagtcggttcttggaccggataccgagttt 31287947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 170
Target Start/End: Complemental strand, 6014363 - 6014281
Alignment:
Q  89 ctggctttaaatggggccct-gcaagtgggcggtgagattggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
    ||||||||||| |||| ||  ||||||||||||||||||| ||| | ||  |||||||  |||||| ||||||||||||||||    
T  6014363 ctggctttaaacggggtccacgcaagtgggcggtgagattagtcccctcgaattagtcgattcttggatcggatatcgagttt 6014281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 170
Target Start/End: Original strand, 22392802 - 22392884
Alignment:
Q  89 ctggctttaaatggggccct-gcaagtgggcggtgagattggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
    ||||||||||| |||||||  ||||||||||||||  ||||||| | |||||||||||  || ||| |||||||| |||||||    
T  22392802 ctggctttaaacggggcccccgcaagtgggcggtggaattggtcccctcagattagtcgatttttggatcggataccgagttt 22392884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 162
Target Start/End: Complemental strand, 11464990 - 11464917
Alignment:
Q  89 ctggctttaaatggggccctgcaagtgggcggtgagattggtctcgtcagattagtctgttcttgaatcggata 162  Q
    ||||||||||| ||||||| ||||||||| |||| |||||||| | ||  |||||||  |||||| ||||||||    
T  11464990 ctggctttaaacggggccccgcaagtgggtggtgggattggtcccctcgaattagtcgattcttggatcggata 11464917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 109 - 170
Target Start/End: Original strand, 22693070 - 22693131
Alignment:
Q  109 gcaagtgggcggtgagattggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
    |||||||||||||| |||||||| | || ||||||||  |||||| |||||||| |||||||    
T  22693070 gcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttt 22693131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 170
Target Start/End: Original strand, 31206290 - 31206439
Alignment:
Q  23 tcaaggtctcaggtttgattccccttggtgtcaatttcgatgggc-aagtccatatagacctttgtcctggctttaaatggg-gccctgcaagtgggcgg 120  Q
    |||||||||||||||| ||||||| ||||| |||||||  ||| | ||||||||| ||| || ||  || ||||||||||||  |||  ||||||| |||    
T  31206290 tcaaggtctcaggttttattccccctggtgccaatttcattggcctaagtccatacagagctatgctcttgctttaaatgggacccccacaagtggacgg 31206389  T
Q  121 tgagattggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
    || |||||| ||| || |||||||| || ||||   |||||| |||||||    
T  31206390 tgggattggactcctcggattagtcggtccttgggccggataccgagttt 31206439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 109 - 170
Target Start/End: Original strand, 37495189 - 37495250
Alignment:
Q  109 gcaagtgggcggtgagattggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
    |||||||||||||| |||||||| | || ||||||||  |||||| |||||||| |||||||    
T  37495189 gcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttt 37495250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 86
Target Start/End: Complemental strand, 14302845 - 14302785
Alignment:
Q  26 aggtctcaggtttgattccccttggtgtcaatttcgatgggcaagtccatatagacctttg 86  Q
    ||||||||||||||||| |  ||||||||||||| |  || |||||||||||||| |||||    
T  14302845 aggtctcaggtttgatttcatttggtgtcaattttggcggacaagtccatatagagctttg 14302785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 61; Significance: 4e-26; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 23 - 170
Target Start/End: Original strand, 9208300 - 9208448
Alignment:
Q  23 tcaaggtctcaggtttgattccccttggtgtcaatttcgatgggcaagtccatatagacctttgtcctggctttaaatgggg-ccctgcaagtgggcggt 121  Q
    ||||||||||||||| |||||||| ||||| |||||||| |||||||||||||| ||| | |||   ||||||||||||||| ||| |||||||||||||    
T  9208300 tcaaggtctcaggttcgattccccctggtgccaatttcggtgggcaagtccatacagagccttgctttggctttaaatggggcccccgcaagtgggcggt 9208399  T
Q  122 gagattggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
    | |||||||||| ||||| |||||  |||||| |||  ||| |||||||    
T  9208400 gggattggtctcctcagaatagtcgattcttggatcaaataccgagttt 9208448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 26 - 170
Target Start/End: Original strand, 11448922 - 11449067
Alignment:
Q  26 aggtctcaggtttgattccccttggtgtcaatttcgatgggc-aagtccatatagacctttgtcctggctttaaatggggccct-gcaagtgggcggtga 123  Q
    |||||||||||| ||||| |  ||||| |||||||| ||||| ||||||||| ||| |||  || |||||||||| |||||||  ||||||||||||||     
T  11448922 aggtctcaggttcgattctctctggtgccaatttcggtgggctaagtccatacagagcttgctc-tggctttaaacggggcccccgcaagtgggcggtgg 11449020  T
Q  124 gattggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
    |||||||| | || ||||||||  |||||||||||||||||||||||    
T  11449021 gattggtcccctcggattagtcgattcttgaatcggatatcgagttt 11449067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 26 - 170
Target Start/End: Complemental strand, 3222781 - 3222637
Alignment:
Q  26 aggtctcaggtttgattccccttggtgtcaatttcgatgggc-aagtccatatagacctttgtcctggctttaaatggggccctgcaagtgggcggtgag 124  Q
    |||||||||||| |||||||  ||||| |||||||| ||||| ||||||||| ||| |||  || || ||||||| ||||||| |||||||||||||| |    
T  3222781 aggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctc-tgtctttaaacggggccccgcaagtgggcggtggg 3222683  T
Q  125 attggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
    ||||||| | || ||||||||  |||||| |||||||| |||||||    
T  3222682 attggtcccctcggattagtcgattcttggatcggataccgagttt 3222637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 26 - 170
Target Start/End: Complemental strand, 21148656 - 21148512
Alignment:
Q  26 aggtctcaggtttgattccccttggtgtcaatttcgatgggc-aagtccatatagacctttgtcctggctttaaatggggccctgcaagtgggcggtgag 124  Q
    |||||||| ||| |||||||  | ||| |||||||||||||| ||||||||| ||| |||  || || ||||||| ||||||| |||||||||||||| |    
T  21148656 aggtctcaagttcgattccctctagtgccaatttcgatgggctaagtccatacagagcttgctc-tgactttaaacggggccccgcaagtgggcggtggg 21148558  T
Q  125 attggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
    ||||||| | || ||||||||  ||||||||||||||| |||||||    
T  21148557 attggtcccctcggattagtcgattcttgaatcggataccgagttt 21148512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 26 - 170
Target Start/End: Original strand, 9239026 - 9239171
Alignment:
Q  26 aggtctcaggtttgattccccttggtgtcaatttcgatgggc-aagtccatatagacctttgtcctggctttaaatggggccct-gcaagtgggcggtga 123  Q
    |||||||||||| |||||||  ||||| |||||||| ||||  ||||||||||||| |||  |  ||||||||||||||||||  ||||||||||||||     
T  9239026 aggtctcaggttcgattccctctggtgccaatttcggtgggttaagtccatatagagcttgctt-tggctttaaatggggcccccgcaagtgggcggtgg 9239124  T
Q  124 gattggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
    |||||||| | || ||||||||  |||||| |||||||| |||||||    
T  9239125 gattggtcccctcggattagtcgattcttggatcggataccgagttt 9239171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 25 - 170
Target Start/End: Complemental strand, 15360245 - 15360099
Alignment:
Q  25 aaggtctcaggtttgattccccttggtgtcaatttcgatgggc-aagtccatatagacctttgtcctggctttaaatgggg-ccctgcaagtgggcggtg 122  Q
    ||||||||||||| |||||||  ||||| |||||||| ||||| ||||||||| ||| | |||  ||||||||||| |||| ||| |||| |||||||||    
T  15360245 aaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagc-ttgctctggctttaaacggggcccccgcaaatgggcggtg 15360147  T
Q  123 agattggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
     |||||||| | || ||||||||  |||||| |||||||| |||||||    
T  15360146 ggattggtcccctcggattagtcgattcttggatcggataccgagttt 15360099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 26 - 170
Target Start/End: Complemental strand, 654292 - 654147
Alignment:
Q  26 aggtctcaggtttgattccccttggtgtcaatttcgatgggc-aagtccatatagacctttgtcctggctttaaatggggc-cctgcaagtgggcggtga 123  Q
    |||||||||||| |||||||  ||||| |||||||| ||||| ||||||||| ||| |||  || |||||||||| ||||| || ||||||||||||||     
T  654292 aggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctc-tggctttaaacggggctcccgcaagtgggcggtgg 654194  T
Q  124 gattggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
    |||||||| | || ||||||||  || ||| |||||||| |||||||    
T  654193 gattggtcccctcggattagtcgattattggatcggataccgagttt 654147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 26 - 170
Target Start/End: Original strand, 9843989 - 9844134
Alignment:
Q  26 aggtctcaggtttgattccccttggtgtcaatttcgatgggc-aagtccatatagacctttgtcctggctttaaatggggccctg-caagtgggcggtga 123  Q
    |||||||||||| || | ||  |||||||||||| | ||||  ||||||||| ||| ||| || ||||||||||| |||||||   ||||||||||||||    
T  9843989 aggtctcaggttcgacttcctctggtgtcaattttggtgggttaagtccatacagagctt-gttctggctttaaacggggccccctcaagtgggcggtga 9844087  T
Q  124 gattggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
    |||||||| | || ||||||||  |||||| ||||||||||||||||    
T  9844088 gattggtcccttcggattagtcgattcttggatcggatatcgagttt 9844134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 28 - 170
Target Start/End: Original strand, 34147399 - 34147542
Alignment:
Q  28 gtctcaggtttgattccccttggtgtcaatttcgatgggc-aagtccatatagacctttgtcctggctttaaatggggccct-gcaagtgggcggtgaga 125  Q
    |||||||||| |||||||  ||||| |||||||| ||||| ||||||||| ||| |||  || |||||||||| ||| |||  |||||||||||||| ||    
T  34147399 gtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctc-tggctttaaacgggccccccgcaagtgggcggtggga 34147497  T
Q  126 ttggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
    |||||| | || ||||||||  |||||| |||||||| |||||||    
T  34147498 ttggtcccctcggattagtcgattcttggatcggataccgagttt 34147542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 28 - 170
Target Start/End: Original strand, 34160015 - 34160158
Alignment:
Q  28 gtctcaggtttgattccccttggtgtcaatttcgatgggc-aagtccatatagacctttgtcctggctttaaatggggccct-gcaagtgggcggtgaga 125  Q
    |||||||||| |||||||  ||||| |||||||| ||||| ||||||||| ||| |||  || |||||||||| ||| |||  |||||||||||||| ||    
T  34160015 gtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctc-tggctttaaacgggccccccgcaagtgggcggtggga 34160113  T
Q  126 ttggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
    |||||| | || ||||||||  |||||| |||||||| |||||||    
T  34160114 ttggtcccctcggattagtcgattcttggatcggataccgagttt 34160158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 23 - 169
Target Start/End: Complemental strand, 17149605 - 17149458
Alignment:
Q  23 tcaaggtctcaggtttgattccccttggtgtcaatttcgatgggcaagtccatatagacctttgtcctggctttaaatgggg-ccctgcaagtgggcggt 121  Q
    ||||||||||||||| |||||||  |||||  ||||||| | |||||||||||| ||| | |||   ||||||||||||||| ||| |||||||  ||||    
T  17149605 tcaaggtctcaggttcgattccctctggtgctaatttcggttggcaagtccatacagagccttgctttggctttaaatggggcccccgcaagtgaacggt 17149506  T
Q  122 gagattggtctcgtcagattagtctgttcttgaatcggatatcgagtt 169  Q
    | |||||||| | ||  ||||||| || |||||||| |||| ||||||    
T  17149505 gggattggtcccctcgaattagtcggtccttgaatcagataccgagtt 17149458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 48 - 170
Target Start/End: Original strand, 17225740 - 17225862
Alignment:
Q  48 tggtgtcaatttcgatgggcaagtccatatagacctttgtcctggctttaaatggggccctgcaagtgggcggtgagattggtctcgtcagattagtctg 147  Q
    ||||| ||||||||  ||||||||||||| ||| |||||  || | ||  || ||||||| |||| ||||||||| ||||| |||| ||||||||||| |    
T  17225740 tggtgccaatttcggcgggcaagtccatacagagctttgctctcgtttagaacggggccccgcaaatgggcggtgggattgatctcctcagattagtcgg 17225839  T
Q  148 ttcttgaatcggatatcgagttt 170  Q
    | |||  ||||||||||||||||    
T  17225840 tccttagatcggatatcgagttt 17225862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 26 - 170
Target Start/End: Original strand, 28672118 - 28672263
Alignment:
Q  26 aggtctcaggtttgattccccttggtgtcaatttcgatgggc-aagtccatatagacctttgtcctggctttaaatggggccct-gcaagtgggcggtga 123  Q
    |||||| ||||| |||||||  |||||||||||| | ||||| ||||||||| ||| ||| ||  |||||||||| ||| |||| ||||||||||||||     
T  28672118 aggtcttaggttcgattccctctggtgtcaattttggtgggctaagtccatacagagctt-gttttggctttaaacgggcccctcgcaagtgggcggtgg 28672216  T
Q  124 gattggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
    |||||||| | || ||||||||  |||||| ||| |||| |||||||    
T  28672217 gattggtcccctcggattagtcgattcttggatcagataccgagttt 28672263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 28 - 131
Target Start/End: Complemental strand, 17081198 - 17081094
Alignment:
Q  28 gtctcaggtttgattccccttggtgtcaatttcgatgggc-aagtccatatagacctttgtcctggctttaaatgggg-ccctgcaagtgggcggtgaga 125  Q
    |||||| |||||||||||  |||||||||||||| ||||| ||||||||| ||| | |||  ||| |||||||||||| ||| |||||||||||||| ||    
T  17081198 gtctcaagtttgattccctctggtgtcaatttcggtgggctaagtccatacagagc-ttgctctgactttaaatggggcccccgcaagtgggcggtggga 17081100  T
Q  126 ttggtc 131  Q
    ||||||    
T  17081099 ttggtc 17081094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 170
Target Start/End: Original strand, 33499522 - 33499671
Alignment:
Q  23 tcaaggtctcaggttt-gattccccttggtgtcaatttcgatgggcaagtccatatagacctttgtcctggctttaaatggggcc-ctgcaagtgggcgg 120  Q
    |||||||||||||||  |||||||  |||||||||||||| ||||| |||||||| | | |||||   |||||||||||||| || |  |||||||||||    
T  33499522 tcaaggtctcaggttcagattccctctggtgtcaatttcggtgggctagtccatacaaatctttgctttggctttaaatgggccctccacaagtgggcgg 33499621  T
Q  121 tgagattggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
    || |||||||| | || |||||||| |||  || | |||||| |||||||    
T  33499622 tgggattggtcccctcggattagtcagttgatggaccggataccgagttt 33499671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 55 - 162
Target Start/End: Original strand, 6164396 - 6164504
Alignment:
Q  55 aatttcgatgggcaagtccatatagacctttgtcctggctttaaatggggccc-tgcaagtgggcggtgagattggtctcgtcagattagtctgttcttg 153  Q
    ||||||||| |||||||||||| ||| |||||  ||| ||||||| | ||||| ||||||||| |  ||||||| ||| | ||||||||||| |||||||    
T  6164396 aatttcgataggcaagtccatacagagctttgatctgtctttaaacgaggcccgtgcaagtggacaatgagatttgtcccctcagattagtcggttcttg 6164495  T
Q  154 aatcggata 162  Q
    || ||||||    
T  6164496 aaccggata 6164504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 170
Target Start/End: Complemental strand, 21982466 - 21982322
Alignment:
Q  26 aggtctcaggtttgattccccttggtgtcaatttcgatgggc-aagtccatatagacctttgtcctggctttaaatggggccct-gcaagtgggcggtga 123  Q
    |||||| ||||| |||||||  ||||| |||||||  ||||| ||||||||| ||| |||  || |||||||||| |||||||  ||||||||||||||     
T  21982466 aggtctgaggttcgattcccgatggtgccaatttcagtgggctaagtccatacagagcttgctc-tggctttaaacggggcccccgcaagtgggcggtgg 21982368  T
Q  124 gattggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
    |||||||| | || ||||||||  |||||| |||||||| |||||||    
T  21982367 gattggtc-cctcggattagtcgattcttggatcggataccgagttt 21982322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 26 - 145
Target Start/End: Original strand, 12390476 - 12390596
Alignment:
Q  26 aggtctcaggtttgattccccttggtgtcaatttcgatgggc-aagtccatatagacctttgtcctggctttaaa-tggggccctgcaagtgggcggtga 123  Q
    |||||||||||| |||||||  ||||| |||||||| ||||| ||||||||| ||| | |||  |||||||||||  ||| ||| ||||||||||||||     
T  12390476 aggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagc-ttgctctggctttaaacagggcccccgcaagtgggcggtgg 12390574  T
Q  124 gattggtctcgtcagattagtc 145  Q
    |||||||| | || ||||||||    
T  12390575 gattggtcccctcggattagtc 12390596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 170
Target Start/End: Complemental strand, 9690760 - 9690639
Alignment:
Q  50 gtgtcaatttcgatgggc-aagtccatatagacctttgtcctggctttaaatggggccct-gcaagtgggcggtgagattggtctcgtcagattagtctg 147  Q
    |||||||||||| ||||| ||||||||| ||| |||  || |||||||||| ||||||||  ||||||| ||||| ||||||||   || ||||||||      
T  9690760 gtgtcaatttcggtgggctaagtccatacagagcttgctc-tggctttaaacggggccctcacaagtggacggtgggattggtcctctcggattagtcga 9690662  T
Q  148 ttcttgaatcggatatcgagttt 170  Q
    |||||| |||||||| |||||||    
T  9690661 ttcttggatcggataccgagttt 9690639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 76
Target Start/End: Original strand, 10377763 - 10377816
Alignment:
Q  23 tcaaggtctcaggtttgattccccttggtgtcaatttcgatgggcaagtccata 76  Q
    |||||||||||||||  ||||||  ||||| |||||||| ||||||||||||||    
T  10377763 tcaaggtctcaggttcaattccctatggtgccaatttcggtgggcaagtccata 10377816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 85
Target Start/End: Original strand, 14212943 - 14213003
Alignment:
Q  26 aggtctcaggtttgattccccttggtgtcaatttcgatgggc-aagtccatatagaccttt 85  Q
    |||||||||||| |||||||  ||||| |||||| ||||||| ||||||||||||| ||||    
T  14212943 aggtctcaggttcgattccctctggtgccaattttgatgggctaagtccatatagagcttt 14213003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 53 - 128
Target Start/End: Complemental strand, 14504201 - 14504125
Alignment:
Q  53 tcaatttcgatgggcaagtccatatagacctttgtcctggctttaaatgggg-ccctgcaagtgggcggtgagattg 128  Q
    |||||||||||||| ||||||||| ||   ||||  |||| ||||||||||| ||| |||||||||||||| |||||    
T  14504201 tcaatttcgatgggtaagtccatacagtgttttgctctggttttaaatggggtccccgcaagtgggcggtgggattg 14504125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 55; Significance: 1e-22; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 25 - 170
Target Start/End: Complemental strand, 654851 - 654706
Alignment:
Q  25 aaggtctcaggtttgattccccttggtgtcaatttcgatgggc-aagtccatatagacctttgtcctggctttaaatggggccctgcaagtgggcggtga 123  Q
    ||||||||||||| |||||||  ||||| |||||||| ||||| ||||||||| ||| |||  || |||||||||| ||| ||| ||||||||||||||     
T  654851 aaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctc-tggctttaaacgggcccccgcaagtgggcggtgg 654753  T
Q  124 gattggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
    |||||||| | || |||||||| ||||||| |||||||| |||||||    
T  654752 gattggtcccctcggattagtcggttcttggatcggataccgagttt 654706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 23 - 162
Target Start/End: Complemental strand, 1766292 - 1766153
Alignment:
Q  23 tcaaggtctcaggtttgattccccttggtgtcaatttcgatgggcaagtccatatagacctttgtcctggctttaaatggggccctgcaagtgggcggtg 122  Q
    ||||| ||||| ||| ||||||| || |||||||||||| |||| ||||||||| ||| ||||| | ||||||  || |||||||  ||||||||||||     
T  1766292 tcaagttctcaagttcgattcccttttgtgtcaatttcggtgggtaagtccatacagaactttgccttggcttagaacggggccccacaagtgggcggtt 1766193  T
Q  123 agattggtctcgtcagattagtctgttcttgaatcggata 162  Q
     |||||||| | || |||||||| || |||||||||||||    
T  1766192 ggattggtcccctcggattagtcggtacttgaatcggata 1766153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 29 - 170
Target Start/End: Original strand, 21835209 - 21835351
Alignment:
Q  29 tctcaggtttgattccccttggtgtcaatttcgatgggc-aagtccatatagacctttgtcctggctttaaatggggccct-gcaagtgggcggtgagat 126  Q
    ||||||||| |||||||  ||||| |||||||| ||||| ||||||||| ||| |||  || |||||||||| |||||||  |||||||||||||| |||    
T  21835209 tctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctc-tggctttaaacggggcccccgcaagtgggcggtgggat 21835307  T
Q  127 tggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
    ||||| | || ||||||||  |||||| ||||||||||||||||    
T  21835308 tggtcccctcggattagtcgattcttggatcggatatcgagttt 21835351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 26 - 170
Target Start/End: Original strand, 19421286 - 19421431
Alignment:
Q  26 aggtctcaggtttgattccccttggtgtcaatttcgatgggc-aagtccatatagacctttgtcctggctttaaatggggc-cctgcaagtgggcggtga 123  Q
    |||||||||||| |||| |   |||||||||||||||||||| ||||||||| ||| |||  || || ||||||||||||| ||  |||||||||||||     
T  19421286 aggtctcaggttcgatttcttctggtgtcaatttcgatgggctaagtccatacagagcttgctc-tgactttaaatggggcgcccacaagtgggcggtgg 19421384  T
Q  124 gattggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
    |||||||||| || ||||||||  |||||||||| |||| |||||||    
T  19421385 gattggtctcctcggattagtcgattcttgaatcagataccgagttt 19421431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 26 - 170
Target Start/End: Original strand, 22119943 - 22120088
Alignment:
Q  26 aggtctcaggtttgattccccttggtgtcaatttcgatgggc-aagtccatatagacctttgtcctggctttaaatggggccct-gcaagtgggcggtga 123  Q
    |||||||||||| |||||||  ||||| |||||||| ||||| ||||||||| ||| |||  || |||||||||| |||||||  ||||||||||||||     
T  22119943 aggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctc-tggctttaaacggggcccccgcaagtgggcggtgg 22120041  T
Q  124 gattggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
    |||||||| | || ||||||||  |||||| |||||||| |||||||    
T  22120042 gattggtcccctcggattagtcgattcttggatcggataccgagttt 22120088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 26 - 170
Target Start/End: Complemental strand, 40543056 - 40542911
Alignment:
Q  26 aggtctcaggtttgattccccttggtgtcaatttcgatgggc-aagtccatatagacctttgtcctggctttaaatggggccct-gcaagtgggcggtga 123  Q
    |||||||||||| |||||||  ||||| |||||||| ||||| ||||||||| ||| |||  || |||||||||| |||||||  ||||||||||||||     
T  40543056 aggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctc-tggctttaaacggggcccccgcaagtgggcggtgg 40542958  T
Q  124 gattggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
    |||||||| | || ||||||||  |||||| |||||||| |||||||    
T  40542957 gattggtcccctcggattagtcgattcttggatcggataccgagttt 40542911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 23 - 170
Target Start/End: Complemental strand, 21574252 - 21574103
Alignment:
Q  23 tcaaggtctcaggtttgattcccctt-ggtgtcaatttcgatgggcaagtccatatagacctttgtcctggctttaaatggggccctg-caagtgggcgg 120  Q
    |||||||| |||||| |||||||||| |||| ||| |||| |||||||||||||| ||| ||||| || |||||  || |||||||   ||||| |||||    
T  21574252 tcaaggtcacaggttcgattcccctttggtgccaacttcggtgggcaagtccatacagagctttgcccaggcttagaacggggcccccacaagtaggcgg 21574153  T
Q  121 tgagattggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
    ||||||||||| | || |||||||| || |||| |||||||| |||||||    
T  21574152 tgagattggtcccctcggattagtcggtccttggatcggataccgagttt 21574103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 23 - 170
Target Start/End: Complemental strand, 23330888 - 23330740
Alignment:
Q  23 tcaaggtctcaggtttgattccccttggtgtcaatttcgatgggcaagtccatatagacctttgtcctggctttaaatggggcc-ctgcaagtgggcggt 121  Q
    ||||||||||||||| || ||||   |||| |||||||| |||||||||||||| ||| |||||  ||||||| ||| ||| || | |||||||||||||    
T  23330888 tcaaggtctcaggttcgactccctccggtgccaatttcggtgggcaagtccatacagagctttgctctggcttaaaacgggacctccgcaagtgggcggt 23330789  T
Q  122 gagattggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
     ||||||||| | ||| |||||||  | |||| |||||||| |||||||    
T  23330788 aagattggtcccctcaaattagtcaatccttggatcggataccgagttt 23330740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 23 - 170
Target Start/End: Original strand, 28647021 - 28647169
Alignment:
Q  23 tcaaggtctcaggtttgattccccttggtgtcaatttcgatgggcaagtccatatagacctttgtcctggctt-taaatggggccctgcaagtgggcggt 121  Q
    ||||||||||||||| |||||||  ||||| |||||||| |||||||||| ||| |||  ||||  ||||||| |||  ||| |||  ||||||||||||    
T  28647021 tcaaggtctcaggttcgattccctctggtgccaatttcggtgggcaagtcaatacagagttttgctctggcttataacggggcccccacaagtgggcggt 28647120  T
Q  122 gagattggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
    | |||||||  | ||  |||||||||| |||| ||||||||||||||||    
T  28647121 gggattggttccctcgaattagtctgtccttggatcggatatcgagttt 28647169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 25 - 170
Target Start/End: Original strand, 2751325 - 2751471
Alignment:
Q  25 aaggtctcaggtttgattccccttggtgtcaatttcgatgggc-aagtccatatagacctttgtcctggctttaaatgggg-ccctgcaagtgggcggtg 122  Q
    ||||||||||||| |||||||  ||||| |||||||| ||||| ||||||||| ||| | |||  ||||||||||| |||| ||| |||| |||||||||    
T  2751325 aaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagc-ttgctctggctttaaacggggcccccgcaaatgggcggtg 2751423  T
Q  123 agattggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
     |||||||| | || ||||||||  |||||| |||||||| |||||||    
T  2751424 ggattggtcccctcggattagtcgattcttggatcggataccgagttt 2751471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 26 - 170
Target Start/End: Original strand, 7275332 - 7275477
Alignment:
Q  26 aggtctcaggtttgattccccttggtgtcaatttcgatgggc-aagtccatatagacctttgtcctggctttaaatggggccct-gcaagtgggcggtga 123  Q
    |||||||||||| |||||||  ||||| |||||||| ||||| ||||||||| ||| |||  || ||||||||||  ||||||  ||||||||||||||     
T  7275332 aggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctc-tggctttaaacagggcccccgcaagtgggcggtgg 7275430  T
Q  124 gattggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
    |||||||| | || ||||||||  |||||| |||||||| |||||||    
T  7275431 gattggtcccctcggattagtcgattcttggatcggataccgagttt 7275477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 92 - 170
Target Start/End: Complemental strand, 33137904 - 33137826
Alignment:
Q  92 gctttaaatggggccctgcaagtgggcggtgagattggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
    |||||||||||||||||||||||||||||||| ||||||| | ||  |||||||  |||||  ||||||||||||||||    
T  33137904 gctttaaatggggccctgcaagtgggcggtgaaattggtcccctcgaattagtcgattcttagatcggatatcgagttt 33137826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 26 - 170
Target Start/End: Original strand, 27704057 - 27704201
Alignment:
Q  26 aggtctcaggtttgattccccttggtgtcaatttcgatgggc-aagtccatatagacctttgtcctggctttaaatggggccctgcaagtgggcggtgag 124  Q
    |||||||||||| |||| || |||||| |||||||| ||||| ||||||||| ||| |||  |  |||||||||||||  ||| ||||||||| |||| |    
T  27704057 aggtctcaggttcgatttcctttggtgccaatttcggtgggctaagtccatagagagcttgctt-tggctttaaatggacccccgcaagtgggtggtgtg 27704155  T
Q  125 attggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
    |||| || | |||||||||||  |||||||||| |||| |||||||    
T  27704156 attgatcccctcagattagtcgattcttgaatcagataccgagttt 27704201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 89 - 170
Target Start/End: Original strand, 28089938 - 28090019
Alignment:
Q  89 ctggctttaaatggggccctgcaagtgggcggtgagattggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
    ||||||||||||||| ||| ||||||||||| ||||||||||| | || ||||||||  |||||| |||||||| |||||||    
T  28089938 ctggctttaaatgggcccccgcaagtgggcgatgagattggtcccctcggattagtcgattcttggatcggataccgagttt 28090019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 23 - 170
Target Start/End: Original strand, 7262269 - 7262415
Alignment:
Q  23 tcaaggtctcaggtttgattccccttggtgtcaatttcgatgggcaagtccatatagacctttgtcctggctttaaatggggccctgcaagtgggcggtg 122  Q
    ||||||||||| ||||||||| || || || |||||||||||| ||| |||||||||| ||||   ||||||||||||||| |||  ||||| |  ||||    
T  7262269 tcaaggtctcaagtttgattctccatgatgccaatttcgatggacaaatccatatagagctttactctggctttaaatgggtccccacaagt-gatggtg 7262367  T
Q  123 agattggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
     |||||||| | ||  ||||||| |  ||||||||||||| |||||||    
T  7262368 ggattggtcccctcgaattagtcggcccttgaatcggataccgagttt 7262415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 28 - 158
Target Start/End: Complemental strand, 9718131 - 9718000
Alignment:
Q  28 gtctcaggtttgattccccttggtgtcaatttcgatgggc-aagtccatatagacctttgtcctggctttaaatggggccct-gcaagtgggcggtgaga 125  Q
    |||||| ||| |||||||  |||||||||||||||||||| ||||||||| ||| | |||  ||||||||||| ||||||||  ||| || ||||||  |    
T  9718131 gtctcaagttcgattccctctggtgtcaatttcgatgggctaagtccatagagagc-ttgctctggctttaaacggggccctcacaaatgagcggtggaa 9718033  T
Q  126 ttggtctcgtcagattagtctgttcttgaatcg 158  Q
    |||||||| ||  ||||||| ||||||||||||    
T  9718032 ttggtctcctcgaattagtcggttcttgaatcg 9718000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 26 - 131
Target Start/End: Original strand, 2103110 - 2103216
Alignment:
Q  26 aggtctcaggtttgattccccttggtgtcaatttcgatgggc-aagtccatatagacctttgtcctggctttaaatgggg-ccctgcaagtgggcggtga 123  Q
    |||||||||||| |||||||  ||| | |||||||| ||||| ||||||||| ||| |||  || ||||||||||||||| ||| ||||||||||||||     
T  2103110 aggtctcaggttcgattccctctggagccaatttcggtgggctaagtccatacagagcttgctc-tggctttaaatggggcccccgcaagtgggcggtgg 2103208  T
Q  124 gattggtc 131  Q
    ||||||||    
T  2103209 gattggtc 2103216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 92 - 170
Target Start/End: Original strand, 31197711 - 31197790
Alignment:
Q  92 gctttaaatggggccct-gcaagtgggcggtgagattggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
    |||||||| |||||||  |||||||| ||||| |||||||| | |||||||||||  |||||| ||||||||||||||||    
T  31197711 gctttaaacggggcccccgcaagtggtcggtgggattggtcccctcagattagtcgattcttggatcggatatcgagttt 31197790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 54 - 170
Target Start/End: Original strand, 3851840 - 3851957
Alignment:
Q  54 caatttcgatgggc-aagtccatatagacctttgtcctggctttaaatggggccct-gcaagtgggcggtgagattggtctcgtcagattagtctgttct 151  Q
    |||||||| ||||| ||||||||||||| |||  || |||||||||| |||||||  |||||||||||||| ||||| || | || ||||||||  ||||    
T  3851840 caatttcggtgggctaagtccatatagagcttgctc-tggctttaaacggggcccccgcaagtgggcggtgggattgatcccctcggattagtcgattct 3851938  T
Q  152 tgaatcggatatcgagttt 170  Q
    || |||||||| |||||||    
T  3851939 tggatcggataccgagttt 3851957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 162
Target Start/End: Complemental strand, 7176008 - 7175871
Alignment:
Q  26 aggtctcaggtttgattccccttggtgtcaatttcgatgggc-aagtccatatagacctttgtcctggctttaaatggggccct-gcaagtgggcggtga 123  Q
    |||||||||||| |||||||  ||||| |||||||| ||||| ||||||||| ||| |||  || ||||||||||  || |||  ||||||||||||||     
T  7176008 aggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctc-tggctttaaacaggacccccgcaagtgggcggtgg 7175910  T
Q  124 gattggtctcgtcagattagtctgttcttgaatcggata 162  Q
    |||||||| | || ||||||||  |||||| ||||||||    
T  7175909 gattggtcccctcggattagtcgattcttggatcggata 7175871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 154
Target Start/End: Original strand, 10091243 - 10091372
Alignment:
Q  26 aggtctcaggtttgattccccttggtgtcaatttcgatgggc-aagtccatatagacctttgtcctggctttaaatgggg-ccctgcaagtgggcggtga 123  Q
    |||||||||||| |||||||  ||| | |||||||| ||||| ||||||||| ||| | |||  |||||||||||||||| ||| ||||||||||||||     
T  10091243 aggtctcaggttcgattccctctggagccaatttcggtgggctaagtccatacagagc-ttgctctggctttaaatggggtccccgcaagtgggcggtgg 10091341  T
Q  124 gattggtctcgtcagattagtctgttcttga 154  Q
    ||||| || | || ||||||||  |||||||    
T  10091342 gattgatcccctcggattagtcgattcttga 10091372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 170
Target Start/End: Original strand, 11997904 - 11998049
Alignment:
Q  26 aggtctcaggtttgattccccttggtgtcaatttcgatgggc-aagtccatatagacctttgtcctggctttaaa-tggggccctgcaagtgggcggtga 123  Q
    |||||||||||| |||||||  ||||| |||||||| | ||| ||||||||| | | | |||  ||||||||||| |||| ||| ||||||||||||||     
T  11997904 aggtctcaggttcgattccctctggtgccaatttcggttggctaagtccatacatagc-ttgctctggctttaaactgggcccccgcaagtgggcggtgg 11998002  T
Q  124 gattggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
    |||||||| | ||  |||||||  |||||| |||||||| |||||||    
T  11998003 gattggtcccctcgaattagtcgattcttggatcggataccgagttt 11998049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 170
Target Start/End: Complemental strand, 17197096 - 17196951
Alignment:
Q  26 aggtctcaggtttgattccccttggtgtcaatttcgatgggc-aagtccatatagacctttgtcctggctttaaatggggccct-gcaagtgggcggtga 123  Q
    |||||||| ||| |||||||  ||||| |||||||| || || ||||||||| ||| |||  || |||||||||| |||||||  ||||||||||||||     
T  17197096 aggtctcaagttcgattccctctggtgccaatttcggtgagctaagtccatacagagcttgctc-tggctttaaacggggcccccgcaagtgggcggtgg 17196998  T
Q  124 gattggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
    |||||||| | ||  |||||||  |||||| |||||||| |||||||    
T  17196997 gattggtcccctcgaattagtcgattcttggatcggataccgagttt 17196951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 162
Target Start/End: Original strand, 22703541 - 22703678
Alignment:
Q  26 aggtctcaggtttgattccccttggtgtcaatttcgatgggc-aagtccatatagacctttgtcctggctttaaatggg-gccctgcaagtgggcggtga 123  Q
    |||||||||||| |||||||  |||||||||||||| ||||| ||||||||| | | | |||  ||||||||||| |||  ||| ||||||||||||||     
T  22703541 aggtctcaggttcgattccctctggtgtcaatttcggtgggctaagtccatacaaagc-ttgctctggctttaaacgggacccccgcaagtgggcggtgg 22703639  T
Q  124 gattggtctcgtcagattagtctgttcttgaatcggata 162  Q
    |||||||| | || ||||||||  |||||  ||||||||    
T  22703640 gattggtcccctcggattagtcgattctttgatcggata 22703678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 170
Target Start/End: Original strand, 29861725 - 29861870
Alignment:
Q  26 aggtctcaggtttgattccccttggtgtcaatttcgatgggc-aagtccatatagacctttgtcctggctttaaatgggg-ccctgcaagtgggcggtga 123  Q
    |||||||||||| |||||||  ||||| |||||||| ||||| ||||||||| ||| | |||  ||||||||||| |||| ||| ||||||||||||||     
T  29861725 aggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagaac-ttgctctggctttaaacggggcccccgcaagtgggcggtgg 29861823  T
Q  124 gattggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
    ||||| || | ||  |||||||  |||||  |||||||| |||||||    
T  29861824 gattgatcccctcgaattagtcgattcttagatcggataccgagttt 29861870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 109 - 170
Target Start/End: Original strand, 27312291 - 27312352
Alignment:
Q  109 gcaagtgggcggtgagattggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
    |||||||||||||| |||||||| | |||||||||||  |||||| |||||||| |||||||    
T  27312291 gcaagtgggcggtgggattggtcccctcagattagtcgattcttggatcggataccgagttt 27312352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 162
Target Start/End: Original strand, 45046928 - 45046983
Alignment:
Q  106 cctgcaagtgggcggtgagattggtctcgtcagattagtctgttcttgaatcggata 162  Q
    ||||||||||| ||||||||| |||||| ||||||||||| ||||||||||| ||||    
T  45046928 cctgcaagtggacggtgagat-ggtctcctcagattagtcggttcttgaatcagata 45046983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 26 - 131
Target Start/End: Complemental strand, 23012654 - 23012548
Alignment:
Q  26 aggtctcaggtttgattccccttggtgtcaatttcgatgggc-aagtccatatagacctttgtcctggctttaaatgggg-ccctgcaagtgggcggtga 123  Q
    |||||| |||||||||||||  | ||| |||||||| ||||| ||||||||| ||| |||  || ||||||||||||||| |||  |||||||||||||     
T  23012654 aggtcttaggtttgattccctctagtgccaatttcggtgggctaagtccatacagagcttgctc-tggctttaaatggggcccccacaagtgggcggtgg 23012556  T
Q  124 gattggtc 131  Q
    ||||||||    
T  23012555 gattggtc 23012548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 170
Target Start/End: Original strand, 18044162 - 18044307
Alignment:
Q  26 aggtctcaggtttgattccccttggtgtcaatttcgatgggc-aagtccatatagacctttgtcctggctttaaatggggccctg-caagtgggcggtga 123  Q
    ||||| |||||| |||||||  | ||| |||||||| ||||| ||||||||| ||| |||  || |||||||||| |||||||   |||||||| ||||     
T  18044162 aggtcccaggttcgattccctcttgtgccaatttcggtgggctaagtccatacagagcttgctc-tggctttaaacggggcccccacaagtgggtggtgg 18044260  T
Q  124 gattggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
     ||||||| | |||||||||||  |||||| |||||||| |||||||    
T  18044261 aattggtcccctcagattagtcgattcttggatcggataccgagttt 18044307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 170
Target Start/End: Original strand, 22638406 - 22638488
Alignment:
Q  89 ctggctttaaatggggcc-ctgcaagtgggcggtgagattggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
    ||||||||||| |||||| | |||||||||||||| ||||| |||| ||  |||||||  |||||| |||||||| |||||||    
T  22638406 ctggctttaaacggggcctccgcaagtgggcggtgggattgatctcctcgaattagtcgattcttggatcggataccgagttt 22638488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 54 - 108
Target Start/End: Complemental strand, 23636683 - 23636629
Alignment:
Q  54 caatttcgatgggcaagtccatatagacctttgtcctggctttaaatggggccct 108  Q
    |||||||| ||||  |||||||||||| |||||  ||||||||||||||||||||    
T  23636683 caatttcggtgggttagtccatatagagctttgctctggctttaaatggggccct 23636629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 170
Target Start/End: Complemental strand, 31712985 - 31712903
Alignment:
Q  89 ctggctttaaatggggccct-gcaagtgggcggtgagattggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
    ||||||||||  ||| |||| |||||||||||||| |||||||| | || ||||||||  |||||| |||||||| |||||||    
T  31712985 ctggctttaagcgggaccctcgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttt 31712903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 76
Target Start/End: Original strand, 1469164 - 1469217
Alignment:
Q  23 tcaaggtctcaggtttgattccccttggtgtcaatttcgatgggcaagtccata 76  Q
    ||||||||||||||| |||| || ||  || |||||||||||||||||||||||    
T  1469164 tcaaggtctcaggttcgatttcctttaatgccaatttcgatgggcaagtccata 1469217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 76
Target Start/End: Complemental strand, 12211684 - 12211631
Alignment:
Q  23 tcaaggtctcaggtttgattccccttggtgtcaatttcgatgggcaagtccata 76  Q
    ||||| |||||||||||||| ||  ||||| |||||||||||| ||||||||||    
T  12211684 tcaagatctcaggtttgatttcctctggtgccaatttcgatggacaagtccata 12211631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 170
Target Start/End: Original strand, 31274032 - 31274113
Alignment:
Q  89 ctggctttaaatggggccctgcaagtgggcggtgagattggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
    ||||||||||| ||||| | |||||||||| |||||||||||| | ||  |||||||  |||||| | |||||| |||||||    
T  31274032 ctggctttaaacggggctccgcaagtgggcagtgagattggtcccctcgaattagtcgattcttggaccggataccgagttt 31274113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 162
Target Start/End: Complemental strand, 39145734 - 39145661
Alignment:
Q  89 ctggctttaaatggggccctgcaagtgggcggtgagattggtctcgtcagattagtctgttcttgaatcggata 162  Q
    ||||||||||| ||| |||||||||||| ||||| |||||||| | ||  |||||||  |||||||||| ||||    
T  39145734 ctggctttaaacgggcccctgcaagtggacggtgggattggtcccctcgaattagtcgattcttgaatcagata 39145661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 76
Target Start/End: Original strand, 17279614 - 17279658
Alignment:
Q  32 caggtttgattccccttggtgtcaatttcgatgggcaagtccata 76  Q
    |||||| ||||||| |||||||||||||| || ||||||||||||    
T  17279614 caggttcgattccctttggtgtcaatttcaataggcaagtccata 17279658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 52; Significance: 9e-21; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 31 - 170
Target Start/End: Original strand, 1178228 - 1178366
Alignment:
Q  31 tcaggtttgattccccttggtgtcaatttcgatgggcaagtccatatagacctttgtcctggctttaaatggggccctgcaagtgggcggtgagattggt 130  Q
    ||||||| ||||| || ||||| |||||||| |||||||||||||| ||| |||||  |||||||||||||||||||  || |||||||||| |||||||    
T  1178228 tcaggttcgattctccctggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatggggccccacacgtgggcggtgggattggt 1178327  T
Q  131 ctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
    | | || ||||||||   ||||| |||||||| |||||||    
T  1178328 c-cctcggattagtcgaatcttggatcggataccgagttt 1178366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 26 - 170
Target Start/End: Complemental strand, 15566645 - 15566501
Alignment:
Q  26 aggtctcaggtttgattccccttggtgtcaatttcgatgggc-aagtccatatagacctttgtcctggctttaaatggggccctgcaagtgggcggtgag 124  Q
    |||||||||||| |||||||  | ||| |||||||| ||||| ||||||||| ||| |||  || |||||||||| ||| ||| |||||||||||||| |    
T  15566645 aggtctcaggttcgattccctctagtgccaatttcggtgggctaagtccatacagagcttgctc-tggctttaaacgggcccccgcaagtgggcggtggg 15566547  T
Q  125 attggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
    ||||||| | |||||||||||  |||||| |||||||| |||||||    
T  15566546 attggtcccctcagattagtcgattcttggatcggataccgagttt 15566501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 25 - 162
Target Start/End: Original strand, 30257674 - 30257812
Alignment:
Q  25 aaggtctcaggtttgattccccttggtgtcaatttcgatgggc-aagtccatatagacctttgtcctggctttaaatgggg-ccctgcaagtgggcggtg 122  Q
    ||||||||||||| ||||||| |||||| |||||||||||| | ||||||||| ||| | |||  |||||||||||||||| ||| ||||||||||||||    
T  30257674 aaggtctcaggttcgattccctttggtgccaatttcgatggactaagtccatacagagc-ttgctctggctttaaatggggcccccgcaagtgggcggtg 30257772  T
Q  123 agattggtctcgtcagattagtctgttcttgaatcggata 162  Q
      ||||||| | || ||||||||  |||||| ||||||||    
T  30257773 gcattggtcccctcggattagtcgattcttggatcggata 30257812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 25 - 170
Target Start/End: Complemental strand, 40133596 - 40133450
Alignment:
Q  25 aaggtctcaggtttgattccccttggtgtcaatttcgatgggc-aagtccatatagacctttgtcctggctttaaatgggg-ccctgcaagtgggcggtg 122  Q
    ||||||||||||| |||||||  |||||||||||||| ||||| ||||||||| ||| | |||  ||||||||||| |||| ||| ||||||||||||||    
T  40133596 aaggtctcaggttcgattccctctggtgtcaatttcggtgggctaagtccatacagagc-ttgctctggctttaaacggggcccccgcaagtgggcggtg 40133498  T
Q  123 agattggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
     |||||||| | ||  |||||||  |||||| |||||||| |||||||    
T  40133497 ggattggtcccctcgaattagtcgattcttggatcggataccgagttt 40133450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 26 - 170
Target Start/End: Complemental strand, 8456296 - 8456151
Alignment:
Q  26 aggtctcaggtttgattccccttggtgtcaatttcgatgggc-aagtccatatagacctttgtcctggctttaaatggggccct-gcaagtgggcggtga 123  Q
    |||||||||||| |||||||  ||||| |||||||| ||||| ||||||||| ||| |||  || |||||||||| |||||||  |||||||||| |||     
T  8456296 aggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctc-tggctttaaacggggcccccgcaagtgggcagtgg 8456198  T
Q  124 gattggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
    |||||||| | || ||||||||  ||||||||||||||| |||||||    
T  8456197 gattggtcccctcggattagtcgattcttgaatcggataccgagttt 8456151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 26 - 170
Target Start/End: Complemental strand, 52821781 - 52821637
Alignment:
Q  26 aggtctcaggtttgattccccttggtgtcaatttcgatgggc-aagtccatatagacctttgtcctggctttaaatggggccctgcaagtgggcggtgag 124  Q
    |||||||||||| |||||||  ||||| |||||||| || || ||||||||| ||| |||  || |||||||||| ||||||| | |||||||||||| |    
T  52821781 aggtctcaggttcgattccctctggtgccaatttcggtgagctaagtccatacagagcttgctc-tggctttaaacggggccccgtaagtgggcggtggg 52821683  T
Q  125 attggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
    ||||||| | || ||||||||  |||||| |||||||| |||||||    
T  52821682 attggtcccctcggattagtcgattcttggatcggataccgagttt 52821637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 26 - 170
Target Start/End: Complemental strand, 53424322 - 53424178
Alignment:
Q  26 aggtctcaggtttgattccccttggtgtcaatttcgatgggc-aagtccatatagacctttgtcctggctttaaatggggccctgcaagtgggcggtgag 124  Q
    |||||||||||| ||||||| |||||| |||||||| ||||| ||||||||| |||  ||||   |||||||||| ||| ||| ||||||| |||||| |    
T  53424322 aggtctcaggttcgattccctttggtgccaatttcggtgggctaagtccatacaga-gtttgctatggctttaaacgggcccccgcaagtgagcggtggg 53424224  T
Q  125 attggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
    ||||||| | || ||||||||  |||||| |||||||| |||||||    
T  53424223 attggtcccctcggattagtcgattcttggatcggataccgagttt 53424178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 25 - 170
Target Start/End: Original strand, 48977438 - 48977584
Alignment:
Q  25 aaggtctcaggtttgattccccttggtgtcaatttcgatgggc-aagtccatatagacctttgtcctggctttaaatggggccc-tgcaagtgggcggtg 122  Q
    ||||||||||||| ||||||   ||||| |||||||| ||||  ||||||||| ||| |||  || |||||||||| ||||||| |||||||||||||||    
T  48977438 aaggtctcaggttcgattccttctggtgccaatttcggtgggttaagtccatacagagcttgctc-tggctttaaacggggcccctgcaagtgggcggtg 48977536  T
Q  123 agattggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
     |||||||| | || |||||||| || |||| |||||||| |||||||    
T  48977537 ggattggtcccctcggattagtcggtccttggatcggataccgagttt 48977584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 26 - 170
Target Start/End: Complemental strand, 31537984 - 31537839
Alignment:
Q  26 aggtctcaggtttgattccccttggtgtcaatttcgatgggc-aagtccatatagacctttgtcctggctttaaatggggccc-tgcaagtgggcggtga 123  Q
    |||||||| |||||||||||  ||||| |||||| | ||||| ||||| ||| ||| |||  || |||||||||| || |||| ||||||||||||||||    
T  31537984 aggtctcatgtttgattccctctggtgccaattttggtgggctaagtctatacagagcttactc-tggctttaaacggagcccctgcaagtgggcggtga 31537886  T
Q  124 gattggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
    |||||||| | ||  |||||||  |||||| ||||||||||||||||    
T  31537885 gattggtcccctcgaattagtcaattcttggatcggatatcgagttt 31537839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 30 - 170
Target Start/End: Complemental strand, 10190884 - 10190743
Alignment:
Q  30 ctcaggtttgattccccttggtgtcaatttcgatgggc-aagtccatatagacctttgtcctggctttaaatgggg-ccctgcaagtgggcggtgagatt 127  Q
    ||||||||||||||||  | ||| |||||||| ||||| ||||||||| ||| | |||  ||||||||||| |||| ||| |||||||| ||||| ||||    
T  10190884 ctcaggtttgattccctctagtgccaatttcggtgggctaagtccatacagagc-ttgctctggctttaaacggggcccccgcaagtggacggtgggatt 10190786  T
Q  128 ggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
    |||| | || ||||||||  |||||| |||||||| |||||||    
T  10190785 ggtcccctcggattagtcgattcttggatcggataccgagttt 10190743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 26 - 170
Target Start/End: Original strand, 26174164 - 26174309
Alignment:
Q  26 aggtctcaggtttgattccccttggtgtcaatttcgatgggc-aagtccatatagacctttgtcctggctttaaatggggccct-gcaagtgggcggtga 123  Q
    |||||||||||| |||| ||  ||||| |||||||| ||||  ||||||||| ||| |||  || ||||||||||| ||||||  ||||||||||||||     
T  26174164 aggtctcaggttcgatttcctctggtgccaatttcggtgggttaagtccatacagagcttgctc-tggctttaaatagggcccccgcaagtgggcggtgg 26174262  T
Q  124 gattggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
    |||||||| | || ||||||||  |||||| |||||||| |||||||    
T  26174263 gattggtcccctcggattagtcgattcttggatcggataccgagttt 26174309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 26 - 170
Target Start/End: Original strand, 35492962 - 35493107
Alignment:
Q  26 aggtctcaggtttgattccccttggtgtcaatttcgatgggc-aagtccatatagacctttgtcctggctttaaatgggg-ccctgcaagtgggcggtga 123  Q
    |||||||||||| |||||||  ||||| |||||||| ||||| ||||||||| ||| | |||  ||||||||||| |||| ||| ||||||||||||||     
T  35492962 aggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagc-ttgctctggctttaaacggggcccccgcaagtgggcggtgg 35493060  T
Q  124 gattggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
    |||||||| | || ||||||||  |||||| || | ||| |||||||    
T  35493061 gattggtcccctcggattagtcgattcttggattgaataccgagttt 35493107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 26 - 170
Target Start/End: Complemental strand, 45529900 - 45529756
Alignment:
Q  26 aggtctcaggtttgattccccttggtgtcaatttcgatgggc-aagtccatatagacctttgtcctggctttaaatggggccct-gcaagtgggcggtga 123  Q
    |||||||||||| |||||||  ||| | |||||||||||||| ||||||||| ||| |||  || |||||||||| ||| |||  ||||||||||||||     
T  45529900 aggtctcaggttcgattccctctggagccaatttcgatgggctaagtccatacagagcttgctc-tggctttaaacgggccccccgcaagtgggcggtgg 45529802  T
Q  124 gattggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
    |||||||| | || ||||||||  |||||| |||||||| |||||||    
T  45529801 gattggtcccctcggattagtcgattcttg-atcggataccgagttt 45529756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 26 - 170
Target Start/End: Complemental strand, 49258408 - 49258263
Alignment:
Q  26 aggtctcaggtttgattccccttggtgtcaatttcgatgggc-aagtccatatagacctttgtcctggctttaaatggggccctg-caagtgggcggtga 123  Q
    |||||||||||| |||||||  | ||| |||||||| ||||| ||||||||| ||| |||  || |||||||||| |||||||   |||||||||||||     
T  49258408 aggtctcaggttcgattccctctagtgccaatttcggtgggctaagtccatacagagcttgctc-tggctttaaacggggcccccacaagtgggcggtgg 49258310  T
Q  124 gattggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
    |||||||| | || ||||||||  |||||| |||||||| |||||||    
T  49258309 gattggtcccctcggattagtcgattcttggatcggataccgagttt 49258263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 89 - 170
Target Start/End: Complemental strand, 24165797 - 24165716
Alignment:
Q  89 ctggctttaaatggggccctgcaagtgggcggtgagattggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
    ||||||||||| ||||||| |||||||||||||| ||||| || | || ||||||||  |||||| |||||||| |||||||    
T  24165797 ctggctttaaacggggccccgcaagtgggcggtgggattgttcccctcggattagtcgattcttggatcggataccgagttt 24165716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 26 - 170
Target Start/End: Complemental strand, 30807299 - 30807154
Alignment:
Q  26 aggtctcaggtttgattccccttggtgtcaatttcgatgggc-aagtccatatagacctttgtcctggctttaaatgggg--ccctgcaagtgggcggtg 122  Q
    |||||||||||| |||||||  ||||| |||||||| ||||| ||||||||| ||| | |||  ||||||||||| ||||  ||| |||||||||||||     
T  30807299 aggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagc-ttgctctggctttaaacggggccccccgcaagtgggcggta 30807201  T
Q  123 agattggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
     |||||||| | || ||||||||  |||||| |||||||| |||||||    
T  30807200 ggattggtc-cctcggattagtcgattcttggatcggataccgagttt 30807154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 25 - 143
Target Start/End: Complemental strand, 7470362 - 7470244
Alignment:
Q  25 aaggtctcaggtttgattccccttggtgtcaatttcgatgggc-aagtccatatagacctttgtcctggctttaaatggggccctgcaagtgggcggtga 123  Q
    ||||||||||||| |||||||  |  || |||||||| ||||| |||| |||| ||| | |||  ||||||||||| |||||||||||||||||| |||     
T  7470362 aaggtctcaggttcgattccctctaatgccaatttcggtgggctaagttcatacagagc-ttgctctggctttaaacggggccctgcaagtgggcagtgg 7470264  T
Q  124 gattggtctcgtcagattag 143  Q
    |||||||| | |||||||||    
T  7470263 gattggtcccctcagattag 7470244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 170
Target Start/End: Complemental strand, 8097362 - 8097280
Alignment:
Q  89 ctggctttaaatggggccct-gcaagtgggcggtgagattggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
    ||||||||||| |||||||  |||||||||||||| |||||||| | || ||||||||  |||||| |||||||| |||||||    
T  8097362 ctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttt 8097280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 170
Target Start/End: Complemental strand, 10083961 - 10083820
Alignment:
Q  30 ctcaggtttgattccccttggtgtcaatttcgatgggc-aagtccatatagacctttgtcctggctttaaatgggg-ccctgcaagtgggcggtgagatt 127  Q
    ||||||||||||||||  | ||| |||||||| ||||| ||||||||| ||| | |||  ||||||||||| |||| |||  ||||||| ||||| ||||    
T  10083961 ctcaggtttgattccctctagtgccaatttcggtgggctaagtccatacagagc-ttgctctggctttaaacggggcccccacaagtggacggtgggatt 10083863  T
Q  128 ggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
    |||| | || ||||||||  |||||| |||||||| |||||||    
T  10083862 ggtcccctcggattagtcgattcttggatcggataccgagttt 10083820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 162
Target Start/End: Complemental strand, 18177033 - 18176896
Alignment:
Q  26 aggtctcaggtttgattccccttggtgtcaatttcgatgggc-aagtccatatagacctttgtcctggctttaaatggggccct-gcaagtgggcggtga 123  Q
    |||| ||||||| |||||||  ||||| |||||||| ||| | ||||||||| ||| |||  || |||||||||| |||||||  ||||||||||||||     
T  18177033 aggtatcaggttcgattccctctggtgccaatttcggtggactaagtccatacagagcttgctc-tggctttaaacggggcccccgcaagtgggcggtgg 18176935  T
Q  124 gattggtctcgtcagattagtctgttcttgaatcggata 162  Q
    |||||||| | || ||||||||  |||||| ||||||||    
T  18176934 gattggtcccatcggattagtcgattcttggatcggata 18176896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 170
Target Start/End: Original strand, 21362994 - 21363139
Alignment:
Q  26 aggtctcaggtttgattccccttggtgtcaatttcgatgggc-aagtccatatagacctttgtcctggctttaaatgg-ggccctgcaagtgggcggtga 123  Q
    |||||||||||| |||||||  |||||||||||||| | ||| ||||||||| ||| | |||  ||||||||||| || | ||| ||||||||||||||     
T  21362994 aggtctcaggttcgattccctctggtgtcaatttcggtaggctaagtccatacagagc-ttgctctggctttaaacggagcccccgcaagtgggcggtgg 21363092  T
Q  124 gattggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
    |||||||  | || ||||| ||  |||||| |||||||| |||||||    
T  21363093 gattggttccctcggattaatcgattcttggatcggataccgagttt 21363139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 170
Target Start/End: Complemental strand, 25289860 - 25289716
Alignment:
Q  26 aggtctcaggtttgattccccttggtgtcaatttcgatgggc-aagtccatatagacctttgtcctggctttaaatggggccct-gcaagtgggcggtga 123  Q
    |||||||||||| |||||||  | ||| |||||||| ||||| ||||||||| ||| |||  || |||||||||| |||||||  ||||||||||||||     
T  25289860 aggtctcaggttcgattccctctagtgccaatttcggtgggctaagtccatacagagcttgctc-tggctttaaacggggcccccgcaagtgggcggtgg 25289762  T
Q  124 gattggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
    |||||||| | ||  |||||||  |||||| |||||||| |||||||    
T  25289761 gattggtc-cctcgaattagtcgattcttggatcggataccgagttt 25289716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 170
Target Start/End: Original strand, 32151538 - 32151620
Alignment:
Q  89 ctggctttaaatggggccct-gcaagtgggcggtgagattggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
    ||||||||||| |||||||  ||||||||||||||||||||||| | ||  |||||||  |||||| |||||||| |||||||    
T  32151538 ctggctttaaacggggcccccgcaagtgggcggtgagattggtcccctcgaattagtcgattcttggatcggataccgagttt 32151620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 170
Target Start/End: Original strand, 46576399 - 46576544
Alignment:
Q  26 aggtctcaggtttgattccccttggtgtcaatttcgatgggc-aagtccatatagacctttgtcctggctttaaatggggccct-gcaagtgggcggtga 123  Q
    |||||||||||| |||||||  ||||| |||||||  ||||| ||||||||| ||| |||  || |||||||||| |||||||  |||||||||||||      
T  46576399 aggtctcaggttcgattccctctggtgccaatttcagtgggctaagtccatacagagcttgctc-tggctttaaacggggcccccgcaagtgggcggtcg 46576497  T
Q  124 gattggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
    |||||||| | |  ||||||||  |||||| |||||||| |||||||    
T  46576498 gattggtccccttggattagtcgattcttggatcggataccgagttt 46576544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 26 - 170
Target Start/End: Original strand, 1692885 - 1693029
Alignment:
Q  26 aggtctcaggtttgattccccttggtgtcaatttcgatgggc-aagtccatatagacctttgtcctggctttaaatggggccctgcaagtgggcggtgag 124  Q
    |||||||||||| ||||||  || |||||||||||| ||| | ||||| ||| ||| |||  || |||||||| |  || ||| |||||||||||||| |    
T  1692885 aggtctcaggttcgattccatttagtgtcaatttcggtggactaagtctatacagaacttgctc-tggctttagacaggcccccgcaagtgggcggtggg 1692983  T
Q  125 attggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
    ||| | | | |||||||||||  ||||||||||||||| |||||||    
T  1692984 atttgccccctcagattagtcgattcttgaatcggataccgagttt 1693029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 109 - 170
Target Start/End: Complemental strand, 17579197 - 17579136
Alignment:
Q  109 gcaagtgggcggtgagattggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
    ||||||||||||||||||||||| | |||||||||||  || ||| |||| |||||||||||    
T  17579197 gcaagtgggcggtgagattggtcccctcagattagtcgatttttggatcgaatatcgagttt 17579136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 23 - 76
Target Start/End: Original strand, 26158866 - 26158919
Alignment:
Q  23 tcaaggtctcaggtttgattccccttggtgtcaatttcgatgggcaagtccata 76  Q
    |||||||||||||||| |||||| |||||| |||||||| |||| |||||||||    
T  26158866 tcaaggtctcaggtttcattccctttggtgccaatttcggtgggtaagtccata 26158919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 170
Target Start/End: Original strand, 48105013 - 48105073
Alignment:
Q  110 caagtgggcggtgagattggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
    |||||||||||||||||||||| | || ||||||||  |||||| |||||||| |||||||    
T  48105013 caagtgggcggtgagattggtcccttcggattagtcgattcttggatcggataccgagttt 48105073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 170
Target Start/End: Complemental strand, 53234054 - 53233912
Alignment:
Q  28 gtctcaggtttgattccccttggtgtcaatttcgatgggc-aagtccatatagacctttgtcctggctttaaatggggccct-gcaagtgggcggtgaga 125  Q
    |||||||||| ||||| |  ||||| |||||||| ||||| ||||||||| ||| |||  || ||||| |||| |||||||  |||||||||||||| ||    
T  53234054 gtctcaggttcgattctctctggtgccaatttcggtgggctaagtccatacagagcttgctc-tggctctaaacggggcccccgcaagtgggcggtggga 53233956  T
Q  126 ttggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
    |||||| | || ||||||||  |||||| |||||||| |||||||    
T  53233955 ttggtcccctcggattagtcgattcttg-atcggataccgagttt 53233912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 93 - 170
Target Start/End: Original strand, 24407379 - 24407457
Alignment:
Q  93 ctttaaatggggccct-gcaagtgggcggtgagattggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
    ||||||| |||||| | |||||||||||||| |||||||| | || ||||||||  |||||| |||||||| |||||||    
T  24407379 ctttaaacggggccatcgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttt 24407457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 170
Target Start/End: Complemental strand, 34492721 - 34492576
Alignment:
Q  26 aggtctcaggtttgattccccttggtgtcaatttcgatgggc-aagtccatatagacctttgtcctggctttaaatggggccct-gcaagtgggcggtga 123  Q
    |||||||| ||| |||||||  || || |||||||| ||||| ||||||||| ||| |||  || |||||||||| |||||||  ||||||||||||||     
T  34492721 aggtctcatgttcgattccctctgctgccaatttcgttgggctaagtccatacagagcttgctc-tggctttaaacggggcccccgcaagtgggcggtgg 34492623  T
Q  124 gattggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
    ||||||||   ||||||||||   |||||| ||| |||| |||||||    
T  34492622 gattggtccattcagattagttgattcttggatctgataccgagttt 34492576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 131
Target Start/End: Original strand, 1242037 - 1242130
Alignment:
Q  39 gattccccttggtgtcaatttcgatgggc-aagtccatatagacctttgtcctggctttaaatggggccctgcaagtgggcggtgagattggtc 131  Q
    |||||||  ||||| |||||| | ||||| ||||||||| ||| |||||  ||||||||||| |||| || ||||||||||||||  |||||||    
T  1242037 gattccctctggtgccaattttggtgggctaagtccatacagagctttgctctggctttaaacggggtcccgcaagtgggcggtggaattggtc 1242130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 170
Target Start/End: Complemental strand, 7485612 - 7485532
Alignment:
Q  89 ctggctttaaatggggccctgcaagtgggcggtgagattggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
    |||||||||||  || |||||||||||| ||||| |||||||| | || ||||||||  |||||| |||||||| |||||||    
T  7485612 ctggctttaaacaggcccctgcaagtggccggtgggattggtc-cctcggattagtcgattcttggatcggataccgagttt 7485532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 109 - 170
Target Start/End: Complemental strand, 53848496 - 53848435
Alignment:
Q  109 gcaagtgggcggtgagattggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
    |||||||||||||| |||||||| | || ||||||||  |||||| |||||||| |||||||    
T  53848496 gcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttt 53848435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 110 - 170
Target Start/End: Complemental strand, 50731298 - 50731238
Alignment:
Q  110 caagtgggcggtgagattggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
    ||||||||||||| |||||||| | |||||||||||  | |||| |||||||| |||||||    
T  50731298 caagtgggcggtgggattggtcccctcagattagtcgatccttggatcggataccgagttt 50731238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 110 - 170
Target Start/End: Original strand, 50781556 - 50781616
Alignment:
Q  110 caagtgggcggtgagattggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
    ||||||||||||| |||||||| | |||||||||||  | |||| |||||||| |||||||    
T  50781556 caagtgggcggtgggattggtcccctcagattagtcgatccttggatcggataccgagttt 50781616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 51; Significance: 3e-20; HSPs: 29)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 26 - 170
Target Start/End: Complemental strand, 33696425 - 33696280
Alignment:
Q  26 aggtctcaggtttgattccccttggtgtcaatttcgatgggc-aagtccatatagacctttgtcctggctttaaatggggccct-gcaagtgggcggtga 123  Q
    ||||||||||||  ||||||  ||||| |||||||| ||||| ||||||||| ||| |||  || ||||||||||||||||||  |||||||||||||||    
T  33696425 aggtctcaggttcaattccctctggtgccaatttcggtgggctaagtccatacagagcttgctc-tggctttaaatggggcccccgcaagtgggcggtga 33696327  T
Q  124 gattggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
    ||||||||   || ||||||||  |||||| ||||||||||||||||    
T  33696326 gattggtcctctcggattagtcaattcttggatcggatatcgagttt 33696280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 26 - 170
Target Start/End: Original strand, 46714443 - 46714589
Alignment:
Q  26 aggtctcaggtttgattcccctt-ggtgtcaatttcgatgggc-aagtccatatagacctttgtcctggctttaaatggggccct-gcaagtgggcggtg 122  Q
    |||||||||||| |||| ||||| |||| |||||||| ||||| ||||||||| ||| ||| | ||| |||||||| |||||||  ||||||||||||||    
T  46714443 aggtctcaggttcgatttccctttggtgccaatttcggtgggctaagtccatacagagctt-gcccttgctttaaacggggcccccgcaagtgggcggtg 46714541  T
Q  123 agattggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
     |||||||| | || ||||||||  ||||||||||||||| |||||||    
T  46714542 ggattggtcccctcggattagtcaattcttgaatcggataccgagttt 46714589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 26 - 170
Target Start/End: Complemental strand, 27528941 - 27528796
Alignment:
Q  26 aggtctcaggtttgattccccttggtgtcaatttcgatgggc-aagtccatatagacctttgtcctggctttaaatggggccct-gcaagtgggcggtga 123  Q
    |||||||||||| |||||||  ||||| |||||||| ||||| ||||||||| ||| |||  || |||||||| | |||||||  |||||||||||||||    
T  27528941 aggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctc-tggctttatacggggcccccgcaagtgggcggtga 27528843  T
Q  124 gattggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
    |||||||| | || ||||||||  |||||| |||||||| |||||||    
T  27528842 gattggtcccctcggattagtcgattcttggatcggataccgagttt 27528796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 27 - 128
Target Start/End: Original strand, 10125872 - 10125973
Alignment:
Q  27 ggtctcaggtttgattccccttggtgtcaatttcgatgggcaagtccatatagacctttgtcctggctttaaatggggccctgcaagtgggcggtgagat 126  Q
    ||||| |||||||||||||| ||||| |||||||  |||||||| ||||| ||| |||||  || |||||||| |||||||||||||||||| ||| |||    
T  10125872 ggtcttaggtttgattccccctggtgccaatttcagtgggcaaggccatacagagctttgctctagctttaaacggggccctgcaagtgggcagtgggat 10125971  T
Q  127 tg 128  Q
    ||    
T  10125972 tg 10125973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 26 - 170
Target Start/End: Complemental strand, 34844904 - 34844759
Alignment:
Q  26 aggtctcaggtttgattccccttggtgtcaatttcgatgggc-aagtccatatagacctttgtcctggctttaaatggggccct-gcaagtgggcggtga 123  Q
    |||||||||||| ||||| |  ||||| |||||||| ||||| ||||||||| ||| |||  || |||||||||| |||||||  ||||||||||||||     
T  34844904 aggtctcaggttcgattctctctggtgccaatttcggtgggctaagtccatacagagcttgctc-tggctttaaacggggcccccgcaagtgggcggtgg 34844806  T
Q  124 gattggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
    |||||||| | || ||||||||  |||||| |||||||| |||||||    
T  34844805 gattggtcccctcggattagtcgattcttggatcggataccgagttt 34844759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 26 - 170
Target Start/End: Complemental strand, 40058998 - 40058853
Alignment:
Q  26 aggtctcaggtttgattccccttggtgtcaatttcgatgggc-aagtccatatagacctttgtcctggctttaaatggggccct-gcaagtgggcggtga 123  Q
    |||||||||||| ||||| |  ||||| |||||||| ||||| ||||||||| ||| |||  || |||||||||| |||||||  ||||||||||||||     
T  40058998 aggtctcaggttcgattctctctggtgccaatttcggtgggctaagtccatacagagcttgctc-tggctttaaacggggcccccgcaagtgggcggtgg 40058900  T
Q  124 gattggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
    |||||||| | || ||||||||  |||||| |||||||| |||||||    
T  40058899 gattggtcccctcggattagtcgattcttggatcggataccgagttt 40058853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 26 - 170
Target Start/End: Original strand, 52983670 - 52983815
Alignment:
Q  26 aggtctcaggtttgattccccttggtgtcaatttcgatgggc-aagtccatatagacctttgtcctggctttaaatggggccct-gcaagtgggcggtga 123  Q
    |||||||||||| |||||||  ||||| |||||||  ||||| ||||||||| ||| |||  || |||||||||| |||||||  ||||||||||||||     
T  52983670 aggtctcaggttcgattccctctggtgccaatttcagtgggctaagtccatacagagcttgctc-tggctttaaacggggcccccgcaagtgggcggtgg 52983768  T
Q  124 gattggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
    |||||||| | || ||||||||  |||||| |||||||| |||||||    
T  52983769 gattggtcccctcggattagtcgattcttggatcggataccgagttt 52983815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 31 - 170
Target Start/End: Original strand, 20566406 - 20566546
Alignment:
Q  31 tcaggtttgattccccttggtgtcaatttcgatgggcaa-gtccatatagacctttgtcctggctttaaatggggccct-gcaagtgggcggtgagattg 128  Q
    ||||||| |||||||  ||||| |||||||| ||||||| ||||||| ||| |||  || |||||||||| || ||||  ||||||||||| || |||||    
T  20566406 tcaggttcgattccctctggtgccaatttcggtgggcaaagtccatacagagcttgctc-tggctttaaacggagcccccgcaagtgggcgctgggattg 20566504  T
Q  129 gtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
    ||| | |||||||||||  |||||| ||||||||||||||||    
T  20566505 gtcccctcagattagtcgattcttggatcggatatcgagttt 20566546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 23 - 107
Target Start/End: Original strand, 37455625 - 37455708
Alignment:
Q  23 tcaaggtctcaggtttgattccccttggtgtcaatttcgatgggcaagtccatatagacctttgtcctggctttaaatggggccc 107  Q
    ||||||||||||||| ||||||||| |||| ||||||| |||||| | ||||||||||  ||||  |||||||||||||||||||    
T  37455625 tcaaggtctcaggttcgattcccct-ggtgccaatttcaatgggctaatccatatagagatttgctctggctttaaatggggccc 37455708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 48 - 170
Target Start/End: Original strand, 28791188 - 28791310
Alignment:
Q  48 tggtgtcaatttcgatgggcaagtccatatagacctttgtcctggctttaaatggggccctgcaagtgggcggtgagattggtctcgtcagattagtctg 147  Q
    |||||||||||||| |||| ||||| ||| | | |||||  ||||||||||| ||| | |  |||||||||||||||||||||    ||  ||||||| |    
T  28791188 tggtgtcaatttcggtgggtaagtctatacaaaactttgctctggctttaaacgggtctccacaagtgggcggtgagattggttctttcgaattagtcgg 28791287  T
Q  148 ttcttgaatcggatatcgagttt 170  Q
    | |||||||||||||||||||||    
T  28791288 tccttgaatcggatatcgagttt 28791310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 26 - 170
Target Start/End: Original strand, 32986248 - 32986393
Alignment:
Q  26 aggtctcaggtttgattccccttggtgtcaatttcgatgggc-aagtccatatagacctttgtcctggctttaaatggggccct-gcaagtgggcggtga 123  Q
    ||||||||||||  ||||||  ||||| |||||||| ||||| ||||||||| ||| |||  || || |||||||||||||||  ||||||||||||||     
T  32986248 aggtctcaggttcaattccctctggtgccaatttcggtgggctaagtccatacagagcttgctc-tgactttaaatggggcccccgcaagtgggcggtgg 32986346  T
Q  124 gattggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
    |||||||| | || || |||||  |||||| |||||||| |||||||    
T  32986347 gattggtcccctcggaatagtcgattcttggatcggataccgagttt 32986393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 27 - 170
Target Start/End: Complemental strand, 5609347 - 5609203
Alignment:
Q  27 ggtctcaggtttgattccccttggtgtcaatttcgatgggc-aagtccatatagacctttgtcctggctttaaatgggg-ccctgcaagtgggcggtgag 124  Q
    ||||||||||| ||||| |  ||||| |||||||| ||||| ||||||||| ||| |||  || ||||||||||||||| ||| |||||||| ||||| |    
T  5609347 ggtctcaggttcgattctctctggtgccaatttcggtgggctaagtccatacagagcttgctc-tggctttaaatggggcccccgcaagtggacggtggg 5609249  T
Q  125 attggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
    |||| || | || ||||||||  |||||| |||||||| |||||||    
T  5609248 attgatcccctcggattagtcgattcttggatcggataccgagttt 5609203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 26 - 169
Target Start/End: Complemental strand, 20078130 - 20077986
Alignment:
Q  26 aggtctcaggtttgattccccttggtgtcaatttcgatgggc-aagtccatatagacctttgtcctggctttaaatgggg-ccctgcaagtgggcggtga 123  Q
    ||||||||||||||||||||  ||||| |||||||| ||||| ||||||||| ||| | |||  ||||||||||| |||| ||| | ||||||||||||     
T  20078130 aggtctcaggtttgattcccactggtgccaatttcggtgggctaagtccatacagagc-ttgctctggctttaaacggggcccccgtaagtgggcggtgg 20078032  T
Q  124 gattggtctcgtcagattagtctgttcttgaatcggatatcgagtt 169  Q
    |||| ||  | || ||||||||  |||||| |||||||| ||||||    
T  20078031 gattagttccctcggattagtcgattcttggatcggataccgagtt 20077986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 28 - 158
Target Start/End: Complemental strand, 13584398 - 13584267
Alignment:
Q  28 gtctcaggtttgattccccttggtgtcaatttcgatgggc-aagtccatatagacctttgtcctggctttaaatggggccct-gcaagtgggcggtgaga 125  Q
    |||||| ||| |||||||  |||||||||||||||||||| ||||||||| ||| | |||  ||||||||||| ||||||||  ||| || ||||||  |    
T  13584398 gtctcaagttcgattccctctggtgtcaatttcgatgggctaagtccatagagagc-ttgctctggctttaaacggggccctcacaaatgagcggtggaa 13584300  T
Q  126 ttggtctcgtcagattagtctgttcttgaatcg 158  Q
    |||||||| ||  ||||||| ||||||||||||    
T  13584299 ttggtctcctcgaattagtcggttcttgaatcg 13584267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 170
Target Start/End: Original strand, 40252403 - 40252485
Alignment:
Q  89 ctggctttaaatggggc-cctgcaagtgggcggtgagattggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
    ||||||||||||||| | || ||||||||||||||||||||||||| ||| ||||||| ||| ||  |||| |||| ||||||    
T  40252403 ctggctttaaatgggtcacccgcaagtgggcggtgagattggtctcctcaaattagtcggtttttagatcgaatattgagttt 40252485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 93 - 166
Target Start/End: Complemental strand, 42135410 - 42135337
Alignment:
Q  93 ctttaaatggggccc-tgcaagtgggcggtgagattggtctcgtcagattagtctgttcttgaatcggatatcga 166  Q
    ||||||||||| ||| |||||||||| ||| ||||||||||  ||||||||||| ||||||||||| ||||||||    
T  42135410 ctttaaatgggacccctgcaagtgggtggtcagattggtcta-tcagattagtcggttcttgaatcagatatcga 42135337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 25 - 170
Target Start/End: Complemental strand, 7392110 - 7391966
Alignment:
Q  25 aaggtctcaggtttgattccccttggtgtcaatttcgatgggcaagtccatatagacctttgtcctggctttaaatggggccctgcaagtgggcggtgag 124  Q
    ||||||||||||| |||||||  ||||| |||||||| |||  ||||||||| |||  ||||  ||||||||||||||| |||    ||||||||||| |    
T  7392110 aaggtctcaggttcgattccctatggtgccaatttcggtggttaagtccatacaga-gtttgctctggctttaaatgggacccccatagtgggcggtggg 7392012  T
Q  125 attggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
    |||| || | || |||||||| ||||||  || ||||| |||||||    
T  7392011 attgttcccctcggattagtcggttcttcgattggataccgagttt 7391966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 33 - 162
Target Start/End: Complemental strand, 25969639 - 25969512
Alignment:
Q  33 aggtttgattccccttggtgtcaatttcgatgggcaagtccatatagacctttgtcctggctttaaatggggccctgcaagtgggcggtgagattggtct 132  Q
    ||||| |||||||| ||||| |||||||| ||| |||||||||| ||| |||  || |||||||||| ||| ||| | ||||| |||||| ||||||||     
T  25969639 aggttggattccccctggtgccaatttcggtggccaagtccatacagaacttgctc-tggctttaaacgggcccccgtaagtgagcggtgggattggtc- 25969542  T
Q  133 cgtcagattagtctgttcttgaatcggata 162  Q
    | ||  |||||||  |||||||||||||||    
T  25969541 cctcgaattagtcgattcttgaatcggata 25969512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 28 - 131
Target Start/End: Original strand, 32990488 - 32990592
Alignment:
Q  28 gtctcaggtttgattccccttggtgtcaatttcgatgggc-aagtccatatagacctttgtcctggctttaaatggggccct-gcaagtgggcggtgaga 125  Q
    |||||||||| ||||||| || ||| |||||||| ||||| ||||||||| ||| |||  || |||||||||| |||||||  |||||||||||||| ||    
T  32990488 gtctcaggttcgattccctttagtgccaatttcggtgggctaagtccatacagagcttgctc-tggctttaaacggggcccccgcaagtgggcggtggga 32990586  T
Q  126 ttggtc 131  Q
    ||||||    
T  32990587 ttggtc 32990592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 170
Target Start/End: Original strand, 25852264 - 25852411
Alignment:
Q  25 aaggtctcaggtttgattccccttggtgtcaatttcgatgggc-aagtccatatagacctttgtcctggcttt-aaatggggccct-gcaagtgggcggt 121  Q
    ||||||||||||| |||||||  ||||| |||||||| ||||| ||||||||| ||| | |||  |||||||| ||| ||| |||| ||||||||||  |    
T  25852264 aaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagc-ttgctctggctttaaaacgggaccctcgcaagtgggcaat 25852362  T
Q  122 gagattggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
    | |||||||| | || |||||||| ||||||| | |||||| |||||||    
T  25852363 gggattggtcccctcggattagtcggttcttggaccggataccgagttt 25852411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 145
Target Start/End: Original strand, 34835579 - 34835700
Alignment:
Q  25 aaggtctcaggtttgattccccttggtgtcaatttcgatgggc-aagtccatatagacctttgtcctggctttaaatgggg--ccctgcaagtgggcggt 121  Q
    ||||||||| ||| |||||||  |||||||||||||| ||||| |||||||||  || || ||| |||||||||||| |||  ||| |||||||||| ||    
T  34835579 aaggtctcatgttcgattccctctggtgtcaatttcggtgggctaagtccatacggagctatgt-ctggctttaaatagggccccccgcaagtgggc-gt 34835676  T
Q  122 gagattggtctcgtcagattagtc 145  Q
    |||||||||| | || ||||||||    
T  34835677 gagattggtcccctcggattagtc 34835700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 25 - 170
Target Start/End: Complemental strand, 12500205 - 12500060
Alignment:
Q  25 aaggtctcaggtttgattccccttggtgtcaatttcgatgggc-aagtccatatagacctttgtcctggctttaaatggg-gccctgcaagtgggcggtg 122  Q
    |||||||||||||||||||||  ||||| ||||||| |||||| ||||||||| | | | |||  ||||||||||| |||  ||| |||||||||||||     
T  12500205 aaggtctcaggtttgattccctctggtgccaatttcaatgggctaagtccatacatagc-ttgctctggctttaaacgggacccccgcaagtgggcggta 12500107  T
Q  123 agattggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
    | |||| |||| || ||||||||  |||||| | |||||| |||||||    
T  12500106 aaattgatctc-tcggattagtcaattcttggaccggataccgagttt 12500060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 36 - 162
Target Start/End: Complemental strand, 13716586 - 13716459
Alignment:
Q  36 tttgattccccttggtgtcaatttcgatgggcaagtccatatagacctttgtcctggctttaaatggggccct-gcaagtgggcggtgagattggtctcg 134  Q
    ||||||||||| | ||| |||||||  ||||||||||||||  || |||||   || |||||||  ||||||| |||||||||||||| ||||||||       
T  13716586 tttgattccccctagtgccaatttcagtgggcaagtccatacggaactttgctatgtctttaaacagggccctcgcaagtgggcggtgggattggtcctc 13716487  T
Q  135 tcagattagtctgttcttgaatcggata 162  Q
    |  |||| ||| ||||||||||||||||    
T  13716486 ttggattggtcagttcttgaatcggata 13716459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 92 - 170
Target Start/End: Original strand, 45302953 - 45303032
Alignment:
Q  92 gctttaaatggggccctgcaagtgggcggtgaga-ttggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
    |||||||||||||||  |||||||| |||||||| ||||||   || ||||||||  ||||||||||||||| |||||||    
T  45302953 gctttaaatggggcctcgcaagtggacggtgagatttggtcatctcggattagtcaattcttgaatcggataccgagttt 45303032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 25 - 162
Target Start/End: Complemental strand, 54127489 - 54127351
Alignment:
Q  25 aaggtctcaggtttgattccccttggtgtcaatttcgatgggc-aagtccatatagacctttgtcctggctttaaatggggccct-gcaagtgggcggtg 122  Q
    |||||||||||||  ||||||  | ||| |||||||| ||||| ||||| ||| ||| |||  || |||||||||| |||||||  ||||||||||||||    
T  54127489 aaggtctcaggttcaattccctcttgtgccaatttcggtgggctaagtctatacagagcttgctc-tggctttaaacggggcccccgcaagtgggcggtg 54127391  T
Q  123 agattggtctcgtcagattagtctgttcttgaatcggata 162  Q
     |||||||| | || |||||||| ||||||| | ||||||    
T  54127390 ggattggtcccctcggattagtcggttcttggaccggata 54127351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 162
Target Start/End: Original strand, 12824475 - 12824588
Alignment:
Q  50 gtgtcaatttcgatgggc-aagtccatatagacctttgtcctggctttaaatggggc-cctgcaagtgggcggtgagattggtctcgtcagattagtctg 147  Q
    |||||||||| ||||||| |||| ||||||||  ||||  || ||||||||||| || ||||||||||| ||||| |||||||||| ||  |||||||      
T  12824475 gtgtcaattttgatgggctaagttcatatagag-tttgctctagctttaaatggagctcctgcaagtggacggtgggattggtctcatcgaattagtcga 12824573  T
Q  148 ttcttgaatcggata 162  Q
    |||||| ||||||||    
T  12824574 ttcttggatcggata 12824588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 93 - 170
Target Start/End: Original strand, 44343632 - 44343710
Alignment:
Q  93 ctttaaatggggc-cctgcaagtgggcggtgagattggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
    ||||||| ||||| || |||||||||||||| |||||||| | ||  |||||||  ||||||||||||||| |||||||    
T  44343632 ctttaaacggggctcccgcaagtgggcggtgggattggtcccctcgaattagtcgattcttgaatcggataccgagttt 44343710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 164
Target Start/End: Complemental strand, 9517787 - 9517648
Alignment:
Q  26 aggtctcaggtttgattccccttggtgtcaatttcgatgggc-aagtccatatagacctttgtcctggctttaaatggggccct-gcaagtgggcggtga 123  Q
    |||||||||||| ||||| |  ||||| |||||||  ||||| ||||||||| ||| |||  || || ||||||| |||||||  ||| ||||| |||||    
T  9517787 aggtctcaggttcgattctctctggtgccaatttcagtgggctaagtccatacagagcttgctc-tgactttaaacggggcccccgcaggtgggtggtga 9517689  T
Q  124 gattggtctcgtcagattagtctgttcttgaatcggatatc 164  Q
    |||||||| | || ||||||||  |||||| ||||||||||    
T  9517688 gattggtcccctcggattagtcgattcttggatcggatatc 9517648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 114 - 170
Target Start/End: Complemental strand, 43352396 - 43352340
Alignment:
Q  114 tgggcggtgagattggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
    |||| ||||||||||||||| |||||||| ||  |||||||||| |||| |||||||    
T  43352396 tgggaggtgagattggtctcctcagattaatcgattcttgaatcagataccgagttt 43352340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 48; Significance: 2e-18; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 29 - 170
Target Start/End: Complemental strand, 8765669 - 8765527
Alignment:
Q  29 tctcaggtttgattccccttggtgtcaatttcgatgggc-aagtccatatagacctttgtcctggctttaaatggggc-cctgcaagtgggcggtgagat 126  Q
    ||||||||| |||||||  ||||| |||||||||||||| ||||||||| ||| |||  || |||||||||| ||||| || |||||||||||||| |||    
T  8765669 tctcaggttcgattccctctggtgccaatttcgatgggctaagtccatacagagcttgctc-tggctttaaacggggctcccgcaagtgggcggtgggat 8765571  T
Q  127 tggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
    ||||| | || ||||||||  |||||| |||||||| |||||||    
T  8765570 tggtcccctcggattagtcgattcttggatcggataccgagttt 8765527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 26 - 170
Target Start/End: Original strand, 4718700 - 4718845
Alignment:
Q  26 aggtctcaggtttgattccccttggtgtcaatttcgatgggc-aagtccatatagacctttgtcctggctttaaatggggccct-gcaagtgggcggtga 123  Q
    |||||||||||| |||||||  ||||| |||||||| ||||| ||||||||| ||| |||  || |||||||||| |||||||  ||||||||||||||     
T  4718700 aggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctc-tggctttaaacggggcccccgcaagtgggcggtgg 4718798  T
Q  124 gattggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
    |||||||| | || ||||||||  |||||| |||||||| |||||||    
T  4718799 gattggtcccctcggattagtcgattcttggatcggataccgagttt 4718845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 22 - 170
Target Start/End: Original strand, 18128564 - 18128713
Alignment:
Q  22 ttcaaggtctcaggtttgattccccttggtgtcaatttcgatgggcaagtccatatagacctttgtcctggctttaaatggggccct-gcaagtgggcgg 120  Q
    |||||||||| || || ||||| |  ||||| |||||||| ||||| | |||||| ||| |||||  ||||||||||| |||||||  ||||||||||||    
T  18128564 ttcaaggtcttagattcgattctctctggtgccaatttcggtgggcgaatccataaagagctttgctctggctttaaacggggcccccgcaagtgggcgg 18128663  T
Q  121 tgagattggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
    || ||||||||   ||||||||||| ||||||| |||| ||| |||||||    
T  18128664 tgggattggtcctctcagattagtcggttcttggatcgaataccgagttt 18128713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 26 - 170
Target Start/End: Original strand, 21603285 - 21603430
Alignment:
Q  26 aggtctcaggtttgattccccttggtgtcaatttcgatgggc-aagtccatatagacctttgtcctggctttaaatggggccct-gcaagtgggcggtga 123  Q
    |||||||||||| |||||||  ||||| |||||||| ||||| ||| ||||| ||| |||  || |||||||||| |||||||  ||||||||||||||     
T  21603285 aggtctcaggttcgattccctatggtgccaatttcggtgggctaagcccatacagagcttgctc-tggctttaaacggggcccccgcaagtgggcggtgg 21603383  T
Q  124 gattggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
    |||||||| | || ||||||||  |||||| |||||||| |||||||    
T  21603384 gattggtcccctcggattagtcgattcttggatcggataccgagttt 21603430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 26 - 170
Target Start/End: Original strand, 28193529 - 28193674
Alignment:
Q  26 aggtctcaggtttgattccccttggtgtcaatttcgatgggc-aagtccatatagacctttgtcctggctttaaatggggccc-tgcaagtgggcggtga 123  Q
    |||||||||||| |||||||  ||||| |||||||| ||||  ||||||||| ||| |||  || |||||||||| ||||||| | |||||||||||||     
T  28193529 aggtctcaggttcgattccctctggtgccaatttcggtgggttaagtccatacagagcttgctc-tggctttaaacggggcccctacaagtgggcggtgg 28193627  T
Q  124 gattggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
    |||||||| | || ||||||||  |||||| |||||||| |||||||    
T  28193628 gattggtcccctcggattagtcgattcttggatcggataccgagttt 28193674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 26 - 170
Target Start/End: Complemental strand, 34237801 - 34237656
Alignment:
Q  26 aggtctcaggtttgattccccttggtgtcaatttcgatgggc-aagtccatatagacctttgtcctggctttaaatgggg-ccctgcaagtgggcggtga 123  Q
    |||||||||||| |||||||  ||||| |||||||| ||||| ||||||||| ||| | |||  ||||||||||| |||| ||| ||||||| ||||||     
T  34237801 aggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagc-ttgctctggctttaaacggggcccccgcaagtgagcggtgg 34237703  T
Q  124 gattggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
    |||||||| | || ||||||||  |||||| |||||||| |||||||    
T  34237702 gattggtcccctcggattagtcgattcttggatcggataccgagttt 34237656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 23 - 131
Target Start/End: Complemental strand, 3403651 - 3403542
Alignment:
Q  23 tcaaggtctcaggtttgattccccttggtgtcaatttcgatgggcaagtccatatagacctttgtcctggctttaaatggggccct-gcaagtgggcggt 121  Q
    ||||||||| | ||| ||||||   ||||| |||||||| |||||||||||||| | | ||||||  ||||||||||||||||||| | |||||||||||    
T  3403651 tcaaggtcttatgttcgattccatctggtgccaatttcggtgggcaagtccatacaaaactttgttttggctttaaatggggccctcgtaagtgggcggt 3403552  T
Q  122 gagattggtc 131  Q
    ||| ||||||    
T  3403551 gaggttggtc 3403542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 23 - 131
Target Start/End: Complemental strand, 26168997 - 26168889
Alignment:
Q  23 tcaaggtctcaggtttgattccccttggtgtcaatttcgatgggcaagtccatatagacctttgtcctggctttaaatggggccct-gcaagtgggcggt 121  Q
    |||||||||||||||||||||| | || || |||||||| ||||||||| |||| ||| | |||| ||||||||||||| | |||| ||||||||| | |    
T  26168997 tcaaggtctcaggtttgattcctcctgatgccaatttcggtgggcaagttcatacagagc-ttgttctggctttaaatgagcccctcgcaagtgggggat 26168899  T
Q  122 gagattggtc 131  Q
    ||||||||||    
T  26168898 gagattggtc 26168889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 31 - 159
Target Start/End: Original strand, 28908883 - 28909012
Alignment:
Q  31 tcaggtttgattccccttggtgtcaatttcgatgggcaagtccatatagacctttgtcctggctttaaatggggc-cctgcaagtgggcggtgagattgg 129  Q
    |||||||  ||||||  ||||||||||| |  |||||||||||||| ||| |||||| ||||||||||| ||||| || ||||||||||| || |||||     
T  28908883 tcaggttcaattccctctggtgtcaattacagtgggcaagtccatacagagctttgttctggctttaaacggggctcccgcaagtgggcgatgtgattga 28908982  T
Q  130 tctcgtcagattagtctgttcttgaatcgg 159  Q
    || | ||||||||||| || |||| |||||    
T  28908983 tcccctcagattagtcggtccttggatcgg 28909012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 25 - 170
Target Start/End: Complemental strand, 3734770 - 3734624
Alignment:
Q  25 aaggtctcaggtttgattccccttggtgtcaatttcgatgggc-aagtccatatagacctttgtcctggctttaaatgggg-ccctgcaagtgggcggtg 122  Q
    ||||||||||||| |||||||  ||||| |||||||| ||||| ||||||||| ||| | |||  ||||||||||| |||| ||| |||| ||||| |||    
T  3734770 aaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagc-ttgctctggctttaaacggggcccccgcaaatgggcagtg 3734672  T
Q  123 agattggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
     |||||||| | || ||||||||  |||||| |||||||| |||||||    
T  3734671 ggattggtcccctcggattagtcgattcttggatcggataccgagttt 3734624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 163
Target Start/End: Original strand, 28088341 - 28088479
Alignment:
Q  26 aggtctcaggtttgattccccttggtgtcaatttcgatggg-caagtccatatagacctttgtcctggctttaaatggggcc-ctgcaagtgggcggtga 123  Q
    ||||||||| || ||||||| ||||||||||||||| ||||  ||||||||| ||| | |||  ||| |||||||||||||| | ||||||||||||||     
T  28088341 aggtctcagattcgattccctttggtgtcaatttcggtgggttaagtccatacagagc-ttgctctgactttaaatggggcctccgcaagtgggcggtgg 28088439  T
Q  124 gattggtctcgtcagattagtctgttcttgaatcggatat 163  Q
    ||||| || | ||||| |||||  |||||| |||||||||    
T  28088440 gattgatcccctcagaatagtcgattcttggatcggatat 28088479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 26 - 162
Target Start/End: Original strand, 39349311 - 39349448
Alignment:
Q  26 aggtctcaggtttgattccccttggtgtcaatttcgatgggc-aagtccatatagacctttgtcctggctttaaatgggg-ccctgcaagtgggcggtga 123  Q
    |||||||||||| |||||||  ||||| |||||||| ||||| ||||||||| ||| | |||  ||||||||||| |||| ||| ||||||||||||||     
T  39349311 aggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagc-ttgctctggctttaaacggggcccccgcaagtgggcggtgg 39349409  T
Q  124 gattggtctcgtcagattagtctgttcttgaatcggata 162  Q
    ||||| || | || ||||||||  |||||| ||||||||    
T  39349410 gattgatcccctcggattagtcgattcttggatcggata 39349448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 50 - 162
Target Start/End: Original strand, 39317099 - 39317211
Alignment:
Q  50 gtgtcaatttcgatgggcaagtccatatagacctttgtcctggctttaaatggggccctgcaagtgggcggtgagattggtctcgtcagattagtctgtt 149  Q
    |||| ||||||| ||| ||||| |||||||| |||||   || ||||| ||||| ||||||||||| |||||||||||| || | ||| |||| || |||    
T  39317099 gtgttaatttcgttggacaagttcatatagaactttgcagtgactttatatgggaccctgcaagtgtgcggtgagattgatcccctcatattaatcggtt 39317198  T
Q  150 cttgaatcggata 162  Q
    |||||||| ||||    
T  39317199 cttgaatcagata 39317211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 170
Target Start/End: Complemental strand, 2639494 - 2639412
Alignment:
Q  89 ctggctttaaatggggccct-gcaagtgggcggtgagattggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
    ||||||||||| |||||||  |||||||||||||| |||||||| | || ||||||||  |||||| |||||||| |||||||    
T  2639494 ctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttt 2639412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 170
Target Start/End: Complemental strand, 15259552 - 15259407
Alignment:
Q  26 aggtctcaggtttgattccccttggtgtcaatttcgatgggc-aagtccatatagacctttgtcctggctttaaatgggg-ccctgcaagtgggcggtga 123  Q
    |||||||||||| |||||||  ||||| |||||||| ||||| ||||||||| ||| | |||  ||||||||||| |||| ||| ||||||||||||||     
T  15259552 aggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagc-ttgctctggctttaaacggggcccccgcaagtgggcggtgt 15259454  T
Q  124 gattggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
     ||||||| | ||  |||||||  |||||| |||||||  |||||||    
T  15259453 aattggtcccctcgaattagtcgattcttggatcggatgccgagttt 15259407  T

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Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 26 - 129
Target Start/End: Original strand, 18532162 - 18532266
Alignment:
Q  26 aggtctcaggtttgattccccttggtgtcaatttcgatgggc-aagtccatatagacctttgtcctggctttaaatggggccc-tgcaagtgggcggtga 123  Q
    |||||||||||| |||||||   | ||||||||||| ||||| ||||||||| ||| |||  || ||| |||||| ||||||| ||||||||||||||||    
T  18532162 aggtctcaggttcgattccctcagatgtcaatttcggtgggctaagtccatacagaacttgctc-tggatttaaacggggcccctgcaagtgggcggtga 18532260  T
Q  124 gattgg 129  Q
    ||||||    
T  18532261 gattgg 18532266  T

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Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 25 - 117
Target Start/End: Complemental strand, 27746482 - 27746390
Alignment:
Q  25 aaggtctcaggtttgattccccttggtgtcaatttcgatgggc-aagtccatatagacctttgtcctggctttaaatggggccctgcaagtggg 117  Q
    ||||||||||||| ||||||| |||||| |||||||| ||||| ||||||||| ||| | |||  ||||||||||| |||||||  ||||||||    
T  27746482 aaggtctcaggttcgattccctttggtgccaatttcggtgggctaagtccatacagagc-ttgctctggctttaaaaggggccccacaagtggg 27746390  T

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Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 23 - 76
Target Start/End: Original strand, 41070813 - 41070866
Alignment:
Q  23 tcaaggtctcaggtttgattccccttggtgtcaatttcgatgggcaagtccata 76  Q
    ||||||||||| ||| ||||||| ||||||||||||||| ||||||||| ||||    
T  41070813 tcaaggtctcaagttcgattccctttggtgtcaatttcggtgggcaagttcata 41070866  T

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Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 64 - 152
Target Start/End: Original strand, 20505646 - 20505734
Alignment:
Q  64 gggcaagtccatatagacctttgtcctggctttaaatggggccctgcaagtgggcggtgagattggtctcgtcagattagtctgttctt 152  Q
    ||||||||||||| | | ||||||  ||||||||||| |||| | |||||||||||||| |||||||| | ||| ||||| | ||||||    
T  20505646 gggcaagtccatacaaagctttgttttggctttaaatagggcaccgcaagtgggcggtgggattggtcccctcaaattagccggttctt 20505734  T

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Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 25 - 170
Target Start/End: Complemental strand, 6953154 - 6953009
Alignment:
Q  25 aaggtctcaggtttgattccccttggtgtcaatttcgatgggc-aagtccatatagacctttgtcctggctttaaa-tggggccctgcaagtgggcggtg 122  Q
    ||||||||||||| |||||||  ||||| |||||||| ||||| ||||||||| ||| | |||  |||||||||||  ||| ||| |||||| |||||||    
T  6953154 aaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagc-ttgctctggctttaaacagggcccccgcaagttggcggtg 6953056  T
Q  123 agattggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
     |||||||| | || ||||||||  |||||| |||| ||| |||||||    
T  6953055 ggattggtc-cctcggattagtcgattcttggatcgaataccgagttt 6953009  T

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Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 25 - 170
Target Start/End: Original strand, 20305962 - 20306108
Alignment:
Q  25 aaggtctcaggtttgattccccttggtgtcaatttcgatgggc-aagtccatatagacctttgtcctggctttaaatggggccct-gcaagtgggcggtg 122  Q
    |||||||||| || ||||||   ||||| |||||||||||||| ||||||||| ||| |||  || |||||||||| ||| |||  ||||||||||||||    
T  20305962 aaggtctcagtttcgattccttctggtgccaatttcgatgggctaagtccatacagagcttgctc-tggctttaaacgggacccccgcaagtgggcggtg 20306060  T
Q  123 agattggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
     |||||||| | ||  |||||||  | |||| |||||||| |||||||    
T  20306061 ggattggtcccctcgaattagtcgatccttggatcggataccgagttt 20306108  T

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Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 25 - 170
Target Start/End: Original strand, 21092595 - 21092741
Alignment:
Q  25 aaggtctcaggtttgattccccttggtgtcaatttcgatgggc-aagtccatatagacctttgtcctggctttaaatggggccct-gcaagtgggcggtg 122  Q
    |||||||||| || ||||||   ||||| |||||||||||||| ||||||||| ||| |||  || |||||||||| ||| |||  ||||||||||||||    
T  21092595 aaggtctcagtttcgattccttctggtgccaatttcgatgggctaagtccatacagagcttgctc-tggctttaaacgggacccccgcaagtgggcggtg 21092693  T
Q  123 agattggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
     |||||||| | ||  |||||||  | |||| |||||||| |||||||    
T  21092694 ggattggtcccctcgaattagtcgatccttggatcggataccgagttt 21092741  T

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Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 170
Target Start/End: Complemental strand, 4698869 - 4698724
Alignment:
Q  26 aggtctcaggtttgattccccttggtgtcaatttcgatgggc-aagtccatatagacctttgtcctggctttaaatgg-ggccctgcaagtgggcggtga 123  Q
    |||||||||||| |||||||  |||||||||||||| ||||| ||||||||  ||| | |||  ||||||||||| || | ||| ||||||| ||||||     
T  4698869 aggtctcaggttcgattccctctggtgtcaatttcggtgggctaagtccatgaagaac-ttgctctggctttaaacggagcccccgcaagtgagcggtgg 4698771  T
Q  124 gattggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
    |||||||| | || ||||||||  ||| || || ||||| |||||||    
T  4698770 gattggtcccctcggattagtcgattcatggattggataccgagttt 4698724  T

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Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 112 - 170
Target Start/End: Complemental strand, 34694634 - 34694576
Alignment:
Q  112 agtgggcggtgagattggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
    ||||| ||||| |||||||| | |||||||||||||| |||| |||||||| |||||||    
T  34694634 agtggacggtgggattggtcccctcagattagtctgtccttggatcggataacgagttt 34694576  T

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Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 103
Target Start/End: Original strand, 21239400 - 21239481
Alignment:
Q  22 ttcaaggtctcaggtttgattccccttggtgtcaatttcgatgggcaagtccatatagacctttgtcctggctttaaatggg 103  Q
    |||||||| ||| ||||||||  || ||||| |||||||| |||||| ||||||||| | |||||   ||||||||||||||    
T  21239400 ttcaaggtttcaagtttgattttccctggtgccaatttcggtgggcatgtccatataaaactttgctttggctttaaatggg 21239481  T

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Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 89 - 145
Target Start/End: Original strand, 2166815 - 2166871
Alignment:
Q  89 ctggctttaaatggggccctgcaagtgggcggtgagattggtctcgtcagattagtc 145  Q
    ||||||||||||  | ||| |||||||||||||| |||||||| | |||||||||||    
T  2166815 ctggctttaaataagaccccgcaagtgggcggtgggattggtcccctcagattagtc 2166871  T

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Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 170
Target Start/End: Original strand, 19471664 - 19471810
Alignment:
Q  26 aggtctcaggtttgattccccttggtgtcaatttcgatgggc-aagtccatatagacctttgtcctggctttaaatgggg--ccctgcaagtgggcggtg 122  Q
    ||||||||||||||||||||  ||||| |||||| | || || ||||||||| ||| | |||  ||||||||||| ||||  ||| ||||||||||| ||    
T  19471664 aggtctcaggtttgattccctctggtgccaattttggtgagctaagtccatacagagc-ttgctctggctttaaacggggccccccgcaagtgggcgatg 19471762  T
Q  123 agattggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
     |||||||| | ||  |||||||  | |||| |||||||| |||||||    
T  19471763 ggattggtcccctcgaattagtcgatacttggatcggataccgagttt 19471810  T

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Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 170
Target Start/End: Original strand, 19542588 - 19542734
Alignment:
Q  26 aggtctcaggtttgattccccttggtgtcaatttcgatgggc-aagtccatatagacctttgtcctggctttaaatgggg--ccctgcaagtgggcggtg 122  Q
    ||||||||||||||||||||  ||||| |||||| | || || ||||||||| ||| | |||  ||||||||||| ||||  ||| ||||||||||| ||    
T  19542588 aggtctcaggtttgattccctctggtgccaattttggtgagctaagtccatacagagc-ttgctctggctttaaacggggccccccgcaagtgggcgatg 19542686  T
Q  123 agattggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
     |||||||| | ||  |||||||  | |||| |||||||| |||||||    
T  19542687 ggattggtcccctcgaattagtcgatacttggatcggataccgagttt 19542734  T

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Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 170
Target Start/End: Complemental strand, 19590108 - 19589962
Alignment:
Q  26 aggtctcaggtttgattccccttggtgtcaatttcgatgggc-aagtccatatagacctttgtcctggctttaaatgggg--ccctgcaagtgggcggtg 122  Q
    ||||||||||||||||||||  ||||| |||||| | || || ||||||||| ||| | |||  ||||||||||| ||||  ||| ||||||||||| ||    
T  19590108 aggtctcaggtttgattccctctggtgccaattttggtgagctaagtccatacagagc-ttgctctggctttaaacggggccccccgcaagtgggcgatg 19590010  T
Q  123 agattggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
     |||||||| | ||  |||||||  | |||| |||||||| |||||||    
T  19590009 ggattggtcccctcgaattagtcgatacttggatcggataccgagttt 19589962  T

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Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 110 - 170
Target Start/End: Original strand, 24018523 - 24018583
Alignment:
Q  110 caagtgggcggtgagattggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
    |||||||||||||||||||||| | |   ||||||| ||||||| | ||||||||||||||    
T  24018523 caagtgggcggtgagattggtccccttgaattagtcggttcttggaccggatatcgagttt 24018583  T

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Target: chr2 (Bit Score: 48; Significance: 2e-18; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 23 - 170
Target Start/End: Complemental strand, 8192500 - 8192353
Alignment:
Q  23 tcaaggtctcaggtttgattccccttggtgtcaatttcgatgggcaagtccatatagacctttgtcctggctttaaatggggccctgcaagtgggcggtg 122  Q
    ||||||||||||||| |||||||  ||||| |||| ||| |||||||||||||||||| |||||  |||||||  || ||  ||  ||||||||||||||    
T  8192500 tcaaggtctcaggttcgattccctctggtgccaatgtcggtgggcaagtccatatagagctttgctctggcttagaacggcccctcgcaagtgggcggtg 8192401  T
Q  123 agattggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
     |||||| | | || |||||||| || |||| |||||||| |||||||    
T  8192400 ggattgggcccctcggattagtcggtccttggatcggataccgagttt 8192353  T

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Target: chr2; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 25 - 170
Target Start/End: Original strand, 15038009 - 15038155
Alignment:
Q  25 aaggtctcaggtttgattccccttggtgtcaatttcgatgggc-aagtccatatagacctttgtcctggctttaaatggggccct-gcaagtgggcggtg 122  Q
    ||||||||||||| ||||||| |||||| |||||||| ||||| ||||||||| ||| |||  |  |||||||||| || ||||  ||||||||||||||    
T  15038009 aaggtctcaggttcgattccctttggtgccaatttcggtgggctaagtccatacagagcttgctt-tggctttaaacggagcccccgcaagtgggcggtg 15038107  T
Q  123 agattggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
     |||||||| | |||||||||||  |||||| |||||||| |||||||    
T  15038108 ggattggtcccctcagattagtcgattcttggatcggataccgagttt 15038155  T

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Target: chr2; HSP #3
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 26 - 170
Target Start/End: Complemental strand, 44946199 - 44946054
Alignment:
Q  26 aggtctcaggtttgattccccttggtgtcaatttcgatgggc-aagtccatatagacctttgtcctggctttaaatggggccct-gcaagtgggcggtga 123  Q
    |||||||||||| ||||||| |||||| |||||||| ||||| ||||||||| ||| |||  || |||||||||| ||| |||  ||||||||||||||     
T  44946199 aggtctcaggttcgattccctttggtgccaatttcggtgggctaagtccatacagaacttgctc-tggctttaaacgggccccccgcaagtgggcggtgg 44946101  T
Q  124 gattggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
    |||||||| | || ||||||||  |||||| |||||||| |||||||    
T  44946100 gattggtcccctcggattagtcgattcttggatcggataccgagttt 44946054  T

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Target: chr2; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 26 - 170
Target Start/End: Original strand, 17324817 - 17324960
Alignment:
Q  26 aggtctcaggtttgattccccttggtgtcaatttcgatgggc-aagtccatatagacctttgtcctggctttaaatggggccctgcaagtgggcggtgag 124  Q
    |||||||||||| |||||||  ||||| |||||||| ||||| ||||||||| ||| |||  || |||||||||||||| |||  ||||||||||||| |    
T  17324817 aggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctc-tggctttaaatgggcccccacaagtgggcggtggg 17324915  T
Q  125 attggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
    ||| ||| | ||| |||||||  |||||| ||||||||||||||||    
T  17324916 attagtcccctcaaattagtcgattcttg-atcggatatcgagttt 17324960  T

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Target: chr2; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 25 - 131
Target Start/End: Original strand, 5394067 - 5394174
Alignment:
Q  25 aaggtctcaggtttgattccccttggtgtcaatttcgatgggc-aagtccatatagacctttgtcctggctttaaatggggcc-ctgcaagtgggcggtg 122  Q
    ||||||||||||| |||||||  |||||||||||||||||||| ||||||||| |||  ||||  ||| |||||||||||||| | ||||||||||||||    
T  5394067 aaggtctcaggttcgattccctctggtgtcaatttcgatgggctaagtccatacaga-gtttgctctgactttaaatggggccgccgcaagtgggcggtg 5394165  T
Q  123 agattggtc 131  Q
     ||||||||    
T  5394166 ggattggtc 5394174  T

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Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 89 - 170
Target Start/End: Original strand, 31778145 - 31778227
Alignment:
Q  89 ctggctttaaatggggccct-gcaagtgggcggtgagattggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
    |||||||||||||||||||  |||||||| ||||||||||||||   ||||||||||| ||||||| |||||||| |||||||    
T  31778145 ctggctttaaatggggcccccgcaagtggacggtgagattggtcctctcagattagtcagttcttggatcggataccgagttt 31778227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 26 - 170
Target Start/End: Complemental strand, 33827719 - 33827574
Alignment:
Q  26 aggtctcaggtttgattccccttggtgtcaatttcgatgggc-aagtccatatagacctttgtcctggctttaaatggggccc-tgcaagtgggcggtga 123  Q
    |||||||||||| |||||||  ||||| |||||||| ||||| ||||||||| ||| |||  || |||||||||| ||| ||| |||||||||||||||     
T  33827719 aggtctcaggttcgattccctctggtgccaatttcgttgggctaagtccatacagagcttgctc-tggctttaaacgggacccctgcaagtgggcggtgg 33827621  T
Q  124 gattggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
    |||||||| | |  ||||||||  |||||| |||||||| |||||||    
T  33827620 gattggtccccttggattagtcgattcttggatcggataccgagttt 33827574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 26 - 170
Target Start/End: Original strand, 35171851 - 35171996
Alignment:
Q  26 aggtctcaggtttgattccccttggtgtcaatttcgatgggc-aagtccatatagacctttgtcctggctttaaatggggccct-gcaagtgggcggtga 123  Q
    |||||||||||| |||||||  |||   |||||||| ||||| ||||||||| ||| |||  || |||||||||| |||||||  ||||||||||||||     
T  35171851 aggtctcaggttcgattccctctggcaccaatttcggtgggctaagtccatacagagcttgctc-tggctttaaacggggcccccgcaagtgggcggtgg 35171949  T
Q  124 gattggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
    |||||||| | || ||||||||  ||||||||||||||| |||||||    
T  35171950 gattggtcccctcggattagtcgattcttgaatcggataccgagttt 35171996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 89 - 170
Target Start/End: Original strand, 41329956 - 41330038
Alignment:
Q  89 ctggctttaaatggggccctg-caagtgggcggtgagattggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
    |||||||||||||||||||   |||||||||||||||||||||| | ||||||||||| ||||||| | |||||| |||||||    
T  41329956 ctggctttaaatggggcccccacaagtgggcggtgagattggtcccctcagattagtcggttcttggaccggataccgagttt 41330038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 69 - 170
Target Start/End: Complemental strand, 6006992 - 6006891
Alignment:
Q  69 agtccatatagacctttgtcctggctttaaatggggccctgcaagtgggcggtgagattggtctcgtcagattagtctgttcttgaatcggatatcgagt 168  Q
    |||||||| ||| |||||| || |||| |||||| || |||||||||| ||||| |||||||||| |||||||||||  | |||||||| |||| |||||    
T  6006992 agtccatacagagctttgttctagcttaaaatggagctctgcaagtggacggtgtgattggtctcctcagattagtcgatccttgaatcagataccgagt 6006893  T
Q  169 tt 170  Q
    ||    
T  6006892 tt 6006891  T

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Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 23 - 145
Target Start/End: Complemental strand, 26176346 - 26176224
Alignment:
Q  23 tcaaggtctcaggtttgattccccttggtgtcaatttcgatgggcaagtccatatagacctttgtcctggctttaaatggggccctgcaagtgggcggtg 122  Q
    |||||||||||| || ||||| || ||||| |||||| | ||| | |||||||| |||||||||   ||| |||||||||| ||| |||||||| |||||    
T  26176346 tcaaggtctcagattcgattctccctggtgccaattttggtggcctagtccatacagacctttgctttggatttaaatgggcccccgcaagtggacggtg 26176247  T
Q  123 agattggtctcgtcagattagtc 145  Q
     |||||| | | |||||||||||    
T  26176246 ggattggacccttcagattagtc 26176224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 26 - 170
Target Start/End: Complemental strand, 2140629 - 2140487
Alignment:
Q  26 aggtctcaggtttgattccccttggtgtcaatttcgatgggcaagtccatatagacctttgtcctggctttaaatggggccct--gcaagtgggcggtga 123  Q
    |||||||||||| |||||||  |||||||||||||| |||   |||||||| ||| |||  || |||||||||||||| |||   ||||||||||||||     
T  2140629 aggtctcaggttcgattccctctggtgtcaatttcggtgg---agtccatacagagcttgctc-tggctttaaatgggcccccccgcaagtgggcggtgg 2140534  T
Q  124 gattggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
    |||||||| | || ||||||||  || ||| |||||||| |||||||    
T  2140533 gattggtcccctcggattagtcgattattggatcggataccgagttt 2140487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 109 - 170
Target Start/End: Complemental strand, 28194200 - 28194139
Alignment:
Q  109 gcaagtgggcggtgagattggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
    |||||| ||||||| |||||||||||||||||||||| || |||| |||||||| |||||||    
T  28194200 gcaagtaggcggtgggattggtctcgtcagattagtcggtccttggatcggataccgagttt 28194139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 92 - 170
Target Start/End: Original strand, 44610156 - 44610235
Alignment:
Q  92 gctttaaatggggccc-tgcaagtgggcggtgagattggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
    |||||||||||||||| ||||||||||||||| |||||||| | || |||||||| ||||||| | || ||| |||||||    
T  44610156 gctttaaatggggcccctgcaagtgggcggtgggattggtcccatcggattagtcggttcttggaccgaataccgagttt 44610235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 92 - 162
Target Start/End: Complemental strand, 34516493 - 34516423
Alignment:
Q  92 gctttaaatggggccctgcaagtgggcggtgagattggtctcgtcagattagtctgttcttgaatcggata 162  Q
    |||||||| ||| |||||||||||||||||| |||||||| | || ||||||||  |||||| ||||||||    
T  34516493 gctttaaacgggcccctgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggata 34516423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 89 - 170
Target Start/End: Original strand, 13266604 - 13266685
Alignment:
Q  89 ctggctttaaatggggccctgcaagtgggcggtgagattggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
    ||||||||||| ||||||| |||||||||   || |||||||| | ||| |||||||  |||||| ||||||||||||||||    
T  13266604 ctggctttaaacggggccccgcaagtgggtaatgggattggtcccctcaaattagtcgattcttggatcggatatcgagttt 13266685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 105 - 170
Target Start/End: Original strand, 14486956 - 14487021
Alignment:
Q  105 ccctgcaagtgggcggtgagattggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
    |||||||||||||||||| |||||||| | || |||||||| || |||| |||||||| |||||||    
T  14486956 ccctgcaagtgggcggtgggattggtcccctcggattagtcggtccttggatcggataccgagttt 14487021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 103
Target Start/End: Complemental strand, 4618834 - 4618754
Alignment:
Q  23 tcaaggtctcaggtttgattccccttggtgtcaatttcgatgggcaagtccatatagacctttgtcctggctttaaatggg 103  Q
    ||||||| ||||||| |||| ||| ||||| ||||||||  ||||||||||||| | | |||||  |||||||||||||||    
T  4618834 tcaaggtttcaggttcgatttcccctggtgccaatttcggcgggcaagtccatacaaaactttgctctggctttaaatggg 4618754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 170
Target Start/End: Complemental strand, 11941293 - 11941211
Alignment:
Q  89 ctggctttaaatggggccct-gcaagtgggcggtgagattggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
    ||||||||||| ||| |||  |||||||||||||| |||||||| | || ||||||||  |||||| |||||||| |||||||    
T  11941293 ctggctttaaacgggacccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttt 11941211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 101
Target Start/End: Complemental strand, 13747653 - 13747576
Alignment:
Q  24 caaggtctcaggtttgattccccttggtgtcaatttcgatgggcaagtccatatagacctttgtcctggctttaaatg 101  Q
    ||||||||||||||||| |||||  |||| | |||||| ||||| |||||||| ||  |||||  |||||||||||||    
T  13747653 caaggtctcaggtttgaatccccccggtgccgatttcggtgggctagtccatacagtgctttgctctggctttaaatg 13747576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 142
Target Start/End: Original strand, 41314043 - 41314159
Alignment:
Q  26 aggtctcaggtttgattccccttggtgtcaatttcgatgggc-aagtccatatagacctttgtcctggctttaaatggggccctgcaagtgggcggtgag 124  Q
    |||||||||||| |||||||  |||||||||||||| ||||| ||||| ||| ||| | |||  ||| ||||||| |||  || |||||||| ||||| |    
T  41314043 aggtctcaggttcgattccctctggtgtcaatttcggtgggctaagtctatacagagc-ttgctctgactttaaacgggatcccgcaagtggacggtggg 41314141  T
Q  125 attggtctcgtcagatta 142  Q
    ||||||| | ||||||||    
T  41314142 attggtcccctcagatta 41314159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 145
Target Start/End: Original strand, 24196055 - 24196173
Alignment:
Q  26 aggtctcaggtttgattccccttggtgtcaatttcgatgggc-aagtccatatagacctttgtcctggctttaaatggggccctgcaagtgggcggtgag 124  Q
    |||| ||||||| |||||||  |||||  ||||||| ||||| ||||||||| ||| |||  || |||||||||| ||| ||| |||||||||||||| |    
T  24196055 aggtttcaggttcgattccctctggtgcaaatttcggtgggctaagtccatacagaacttgctc-tggctttaaacgggcccc-gcaagtgggcggtggg 24196152  T
Q  125 attggtctcgtcagattagtc 145  Q
    ||||||| | || ||||||||    
T  24196153 attggtcccctcggattagtc 24196173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 89 - 170
Target Start/End: Original strand, 25293272 - 25293355
Alignment:
Q  89 ctggctttaaatggggccct--gcaagtgggcggtgagattggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
    ||||||||||| |||||||   ||||||||||| || |||||||| | || ||||||||  |||||| |||||||| |||||||    
T  25293272 ctggctttaaacggggccccccgcaagtgggcgatgggattggtcccctcggattagtcgattcttggatcggataccgagttt 25293355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 23 - 131
Target Start/End: Original strand, 29698195 - 29698303
Alignment:
Q  23 tcaaggtctcaggtttgattccccttggtgtcaatttcgatgggcaagtccatatagacctttgtcctggctttaaatggggccctgcaagtgggcggtg 122  Q
    ||||||||||| |||| ||| ||  |||||||||||||| ||||||||| |||| ||| ||||   ||| ||| |||  || ||| |||| |||||| ||    
T  29698195 tcaaggtctcaagttttatttcctctggtgtcaatttcggtgggcaagttcatacagagctttactctgacttaaaacaggaccccgcaaatgggcgatg 29698294  T
Q  123 agattggtc 131  Q
    |||||||||    
T  29698295 agattggtc 29698303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0576 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 25 - 170
Target Start/End: Complemental strand, 5229 - 5083
Alignment:
Q  25 aaggtctcaggtttgattccccttggtgtcaatttcgatgggc-aagtccatatagacctttgtcctggctttaaatgggg-ccctgcaagtgggcggtg 122  Q
    ||||||||||||| |||||||  ||||| |||||||| ||||| ||||||||| ||| | |||  ||||||||||| |||| ||| |||| |||||||||    
T  5229 aaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagc-ttgctctggctttaaacggggcccccgcaaatgggcggtg 5131  T
Q  123 agattggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
     |||||||| | || ||||||||  |||||| |||||||| |||||||    
T  5130 ggattggtcccctcggattagtcgattcttggatcggataccgagttt 5083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 26 - 170
Target Start/End: Original strand, 40376 - 40520
Alignment:
Q  26 aggtctcaggtttgattccccttggtgtcaatttcgatgggc-aagtccatatagacctttgtcctggctttaaatgggg-ccctgcaagtgggcggtga 123  Q
    |||||||||||| |||||||  ||||| |||||||| ||||| ||||||||| ||| | |||  ||||||||||| |||| ||| ||||||||||||||     
T  40376 aggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagc-ttgctctggctttaaacggggcccccgcaagtgggcggtgg 40474  T
Q  124 gattggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
    |||||||| | || ||||||||  |||||| |||||||| |||||||    
T  40475 gattggtc-cctcggattagtcgattcttggatcggataccgagttt 40520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 26 - 170
Target Start/End: Original strand, 161860 - 162005
Alignment:
Q  26 aggtctcaggtttgattccccttggtgtcaatttcgatgggc-aagtccatatagacctttgtcctggctttaaatggggccct-gcaagtgggcggtga 123  Q
    |||||||||||| |||||||  ||||| |||||||| ||||| ||||||||| ||| |||  || ||||||| ||||||||||  ||||||||||||||     
T  161860 aggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctc-tggcttttaatggggcccccgcaagtgggcggtgg 161958  T
Q  124 gattggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
    |||||||| | || ||||||||  |||||| ||| |||| |||||||    
T  161959 gattggtcccctcggattagtcgattcttggatcagataccgagttt 162005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 29 - 162
Target Start/End: Complemental strand, 7452 - 7318
Alignment:
Q  29 tctcaggtttgattccccttggtgtcaatttcgatgggc-aagtccatatagacctttgtcctggctttaaatggggccct-gcaagtgggcggtgagat 126  Q
    ||||||||| |||||||   |||| |||||||| ||||| ||||||||| ||| |||| || |||||||||| |||||||  |||||||||||||| |||    
T  7452 tctcaggttcgattccctccggtgccaatttcggtgggctaagtccatacagagctttctc-tggctttaaacggggcccccgcaagtgggcggtgggat 7354  T
Q  127 tggtctcgtcagattagtctgttcttgaatcggata 162  Q
    ||||| | || ||||||||  |||||| ||||||||    
T  7353 tggtcccctcggattagtcgattcttggatcggata 7318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1175 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold1175
Description:

Target: scaffold1175; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 89 - 170
Target Start/End: Complemental strand, 2509 - 2427
Alignment:
Q  89 ctggctttaaatggggccct-gcaagtgggcggtgagattggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
    ||||||||||| |||||||  |||||||||||||| |||||||| | || |||||||| || ||||||||||||| |||||||    
T  2509 ctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtccgtccttgaatcggataccgagttt 2427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 26 - 170
Target Start/End: Original strand, 39143 - 39288
Alignment:
Q  26 aggtctcaggtttgattccccttggtgtcaatttcgatgggcaa-gtccatatagacctttgtcctggctttaaatggggccct-gcaagtgggcggtga 123  Q
    |||||||| ||| |||||||  ||||| |||||||| ||||| | ||||||| ||| ||| || ||||||||||| |||||||  ||||||||||||||     
T  39143 aggtctcaagttcgattccctctggtgccaatttcggtgggctatgtccatacagaactt-gttctggctttaaacggggcccccgcaagtgggcggtgg 39241  T
Q  124 gattggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
    |||||||| | || ||||||||  |||||| ||| |||| |||||||    
T  39242 gattggtcccctcggattagtcgattcttggatcagataccgagttt 39288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 23 - 170
Target Start/End: Complemental strand, 29291 - 29144
Alignment:
Q  23 tcaaggtctcaggtttgattccccttggtgtcaatttcgatgggcaagtccatatagacctttgtcctggctttaaatggggccctgcaagtgggcggtg 122  Q
    ||||||||| ||||| |||||||  || || || ||||| | || ||||||||| ||| |||||  ||||||| ||||||  ||| |||| ||| | |||    
T  29291 tcaaggtcttaggttcgattcccgctgatgccattttcggtcggtaagtccatacagagctttgctctggcttaaaatggacccccgcaaatggacagtg 29192  T
Q  123 agattggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
     |||||||| | ||||||||||| || |||| |||||||| |||||||    
T  29191 ggattggtcccctcagattagtcagtccttggatcggataccgagttt 29144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0623 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0623
Description:

Target: scaffold0623; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 170
Target Start/End: Complemental strand, 1202 - 1058
Alignment:
Q  26 aggtctcaggtttgattccccttggtgtcaatttcgatgggc-aagtccatatagacctttgtcctggctttaaatgggg-ccctgcaagtgggcggtga 123  Q
    |||||||||||| |||||||  ||| | |||||||| ||||| ||||||||| ||| |||  || ||||||||||||||| ||| |||||||| |||||     
T  1202 aggtctcaggttcgattccctctggagccaatttcggtgggctaagtccatacagagcttgctc-tggctttaaatggggcccccgcaagtggacggtgg 1104  T
Q  124 gattggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
    |||||||| | ||  |||||||  |||||| |||||||| |||||||    
T  1103 gattggtcccctcgaattagtcgattcttg-atcggataccgagttt 1058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 170
Target Start/End: Complemental strand, 9445 - 9301
Alignment:
Q  26 aggtctcaggtttgattccccttggtgtcaatttcgatgggc-aagtccatatagacctttgtcctggctttaaatgggg-ccctgcaagtgggcggtga 123  Q
    |||||||||||| |||||||  ||| | |||||||| ||||| ||||||||| ||| |||  || ||||||||||||||| ||| |||||||| |||||     
T  9445 aggtctcaggttcgattccctctggagccaatttcggtgggctaagtccatacagagcttgctc-tggctttaaatggggcccccgcaagtggacggtgg 9347  T
Q  124 gattggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
    |||||||| | ||  |||||||  |||||| |||||||| |||||||    
T  9346 gattggtcccctcgaattagtcgattcttg-atcggataccgagttt 9301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 131
Target Start/End: Complemental strand, 12146 - 12041
Alignment:
Q  26 aggtctcaggtttgattccccttggtgtcaatttcgatgggc-aagtccatatagacctttgtcctggctttaaatggggccctgcaagtgggcggtgag 124  Q
    |||||||||||| |||| ||  ||| | |||||||| ||||| ||||||||| ||| |||  || ||||||||||||||||||  ||||||| ||||| |    
T  12146 aggtctcaggttcgatttcctctggagccaatttcggtgggctaagtccatacagagcttgctc-tggctttaaatggggccccacaagtggacggtggg 12048  T
Q  125 attggtc 131  Q
    |||||||    
T  12047 attggtc 12041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 170
Target Start/End: Original strand, 66868 - 66950
Alignment:
Q  89 ctggctttaaatggggccct-gcaagtgggcggtgagattggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
    ||||||||||| |||||||  |||||||||||||| |||||||| | || |||||||| || |||| |||||||| |||||||    
T  66868 ctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcggtccttggatcggataccgagttt 66950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0459 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 26 - 170
Target Start/End: Complemental strand, 10839 - 10696
Alignment:
Q  26 aggtctcaggtttgattccccttggtgtcaatttcgatgggc-aagtccatatagacctttgtcctggctttaaatggggccctgcaagtgggcggtgag 124  Q
    |||||||||||| |||| ||  ||| | |||||||| ||||| ||||||||| ||| |||  || ||||||||||||||||||  ||||||| ||||| |    
T  10839 aggtctcaggttcgatttcctctggagccaatttcggtgggctaagtccatacagagcttgctc-tggctttaaatggggccccacaagtggacggtggg 10741  T
Q  125 attggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
    ||||||| | ||  |||||||  |||||| |||||||| |||||||    
T  10740 attggtcccctcgaattagtcaattcttg-atcggataccgagttt 10696  T

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Target: scaffold0157 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 25 - 170
Target Start/End: Original strand, 20272 - 20417
Alignment:
Q  25 aaggtctcaggtttgattccccttggtgtcaatttcgatgggc-aagtccatatagacctttgtcctggctttaaatggg-gccctgcaagtgggcggtg 122  Q
    |||||||||||||||||||||  ||||| ||||||| |||||| ||||||||| | | | |||  ||||||||||| |||  ||| |||||||||||||     
T  20272 aaggtctcaggtttgattccctctggtgccaatttcaatgggctaagtccatacatagc-ttgctctggctttaaacgggacccccgcaagtgggcggta 20370  T
Q  123 agattggtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
    | |||| |||| || ||||||||  |||||| | |||||| |||||||    
T  20371 aaattgatctc-tcggattagtcaattcttggaccggataccgagttt 20417  T

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Target: scaffold0051 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 170
Target Start/End: Complemental strand, 53012 - 52872
Alignment:
Q  31 tcaggtttgattccccttggtgtcaatttcgatgggcaag-tccatatagacctttgtcctggctttaaatggggccct-gcaagtgggcggtgagattg 128  Q
    ||||||| |||||||  ||||| |||||||| |||||||  |||||| ||| |||  || |||||||||| |||||||  ||| |||||||||  |||||    
T  53012 tcaggttcgattccctctggtgccaatttcggtgggcaaaatccatacagagcttgctc-tggctttaaacggggcccccgcaggtgggcggtaggattg 52914  T
Q  129 gtctcgtcagattagtctgttcttgaatcggatatcgagttt 170  Q
    |||   || ||||||||  ||||||||||||||| |||||||    
T  52913 gtcctctcggattagtcgattcttgaatcggataccgagttt 52872  T

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Target: scaffold0026 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 25 - 131
Target Start/End: Complemental strand, 97513 - 97406
Alignment:
Q  25 aaggtctcaggtttgattccccttggtgtcaatttcgatgggc-aagtccatatagacctttgtcctggctttaaatggg-gccctgcaagtgggcggtg 122  Q
    ||||||||||||| |||||||  ||||| |||||||| ||||| ||||||||| ||| | |||  ||| ||||||| |||  ||| ||||||||||||||    
T  97513 aaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagc-ttgctctgactttaaacgggacccccgcaagtgggcggtg 97415  T
Q  123 agattggtc 131  Q
     ||||||||    
T  97414 ggattggtc 97406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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