View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF8436_high_5 (Length: 434)
Name: NF8436_high_5
Description: NF8436
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8436_high_5 |
 | |
|
| [»] scaffold0648 (1 HSPs) |
| | |
|
| [»] scaffold0274 (1 HSPs) |
| | |
|
Alignment Details
Target: chr2 (Bit Score: 340; Significance: 0; HSPs: 4)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 340; E-Value: 0
Query Start/End: Original strand, 1 - 425
Target Start/End: Original strand, 33370158 - 33370584
Alignment:
| Q |
1 |
agaagggactccttaccatgatggacttttcttttttgatgtttactttccccctggatatcccaatggaccccc--ggtatgtggttgaggatacttta |
98 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
33370158 |
agaagggactccttaccatgatggtcttttcttttttgatgtttactttccccctggatatcccaatggacccccccggtatgtggttgaggatacttta |
33370257 |
T |
|
| Q |
99 |
tctgactgacgttattttctagttcactcatttaaattcaattccgacaaactggtccannnnnnnncatggcagcaggtccactaccactctggtggtc |
198 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||| ||||||| |
|
|
| T |
33370258 |
tctgactgacgttattttctagttcactcatttaaattcaattccgacaaactggtccattttttttcatggcagcaagtccactaccactccggtggtc |
33370357 |
T |
|
| Q |
199 |
ttcggctcaaccctaatttgtatgcctgtggcaaagtatgcctcagtctacttaacacctggtcaggcgacaaaaatcagatgtggactccatgtgtttc |
298 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||| ||||||| |
|
|
| T |
33370358 |
ttcggctcaaccctaatttgtatgcctgtggcaaagtatgcctcagtctacttaacacctggtctggtgacaaaaatcagatgtggactccaggtgtttc |
33370457 |
T |
|
| Q |
299 |
gacaatgctacaggttctagtctccatacaaggtctaatcttgaatgcaaagccttacttcaatgaacctggatgggcaccttcaaagggcacaccgggc |
398 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| |
|
|
| T |
33370458 |
gacaatgctacaggttctagtctccatacaaattctaatcttgaatgcaaagccttacttcaatgaacctggatgggcaccttcgaagggcaaaccgggt |
33370557 |
T |
|
| Q |
399 |
ggtgaagctagttccctgcagtataat |
425 |
Q |
| |
|
|||||||| | |||||||||||||||| |
|
|
| T |
33370558 |
ggtgaagcgaattccctgcagtataat |
33370584 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 1 - 372
Target Start/End: Original strand, 33363816 - 33364186
Alignment:
| Q |
1 |
agaagggactccttaccatgatggacttttcttttttgatgtttactttccccctggatatcccaatggacccccggtatgtggttgaggatactttatc |
100 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||||||| |||||| ||||||||||| |||||||||| ||||||||| ||||||||| |
|
|
| T |
33363816 |
agaagggactccttaccatgatggtcttttcttttttgatgtttacttcccccctaaatatcccaatgtacccccggtacgtggttgagaatactttatt |
33363915 |
T |
|
| Q |
101 |
tgactgacgttattttctagttcactcatttaaattcaattccgacaaactggtccannnnnnnncatggcagcaggtccactaccactctggtggtctt |
200 |
Q |
| |
|
| ||||| ||||||||| || ||||| ||| |||||||||| |||||| ||| || ||||| | |||||||||||||||| |||| | |
|
|
| T |
33363916 |
tagctgacattattttcttgtgcactctttttaattcaattctgacaaa-tgggacaattttttgtggggcagaaagtccactaccactctgtaggtcat |
33364014 |
T |
|
| Q |
201 |
cggctcaaccctaatttgtatgcctgtggcaaagtatgcctcagtctacttaacacctggtcaggcgacaaaaatcagatgtggactccatgtgtttcga |
300 |
Q |
| |
|
||||| || || |||||||||| |||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| ||||||||| |
|
|
| T |
33364015 |
cggcttaatccaaatttgtatgattgtggcaaagtatgcctcagtctacttaacacctggtctggcgacaagaatcagatgtggactccaggtgtttcga |
33364114 |
T |
|
| Q |
301 |
caatgctacaggttctagtctccatacaaggtctaatcttgaatgcaaagccttacttcaatgaacctggat |
372 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
33364115 |
caatgctacaggttctagtctccatacaagggctaatcttgaatgcgaagccttacttcaatgaacctggat |
33364186 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 293 - 342
Target Start/End: Complemental strand, 5839010 - 5838961
Alignment:
| Q |
293 |
tgtttcgacaatgctacaggttctagtctccatacaaggtctaatcttga |
342 |
Q |
| |
|
|||||| ||||| |||||||||||||||||||| ||||||||| |||||| |
|
|
| T |
5839010 |
tgtttcaacaattctacaggttctagtctccattcaaggtctagtcttga |
5838961 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 84
Target Start/End: Complemental strand, 5839317 - 5839238
Alignment:
| Q |
5 |
gggactccttaccatgatggacttttcttttttgatgtttactttccccctggatatcccaatggacccccggtatgtgg |
84 |
Q |
| |
|
||||||||||||||||| || ||||||||||| ||| ||||||| || ||| | |||||||| ||| ||||||||||| |
|
|
| T |
5839317 |
gggactccttaccatgacggtcttttctttttcgatctttacttacctggtggctttcccaatgtaccgccggtatgtgg |
5839238 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 284; Significance: 1e-159; HSPs: 6)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 284; E-Value: 1e-159
Query Start/End: Original strand, 1 - 425
Target Start/End: Original strand, 41431872 - 41432294
Alignment:
| Q |
1 |
agaagggactccttaccatgatggacttttcttttttgatgtttactttccccctggatatcccaatggacccccggtatgtggttgaggatactttatc |
100 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||||||| |||||| ||||||||||| |||||||||| |||||||| ||||||||||| |
|
|
| T |
41431872 |
agaagggactccttaccatgatggtcttttcttttttgatgtttacttcccccctaaatatcccaatgtacccccggtacgtggttgatgatactttatc |
41431971 |
T |
|
| Q |
101 |
tgactgacgttattttctagttcactcatttaaattcaattccgacaaactggtccannnnnnnncatggcagcaggtccactaccactctggtggtctt |
200 |
Q |
| |
|
|||||||| ||||||||| |||||||| ||| |||||||||||||||| | |||||| |||||||||| |||||||||||||||||||||||| |
|
|
| T |
41431972 |
tgactgacattattttcttgttcactccttttaattcaattccgacaa-cgggtccattttttt-catggcagcaagtccactaccactctggtggtctt |
41432069 |
T |
|
| Q |
201 |
cggctcaaccctaatttgtatgcctgtggcaaagtatgcctcagtctacttaacacctggtcaggcgacaaaaatcagatgtggactccatgtgtttcga |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| ||||||| ||||||||| ||||||||| |
|
|
| T |
41432070 |
cggctcaaccctaatttgtatgcctgtggcaaagtatgcctcagtctacttaacacctggtctggcagcaagaatcagaaatggactccaggtgtttcga |
41432169 |
T |
|
| Q |
301 |
caatgctacaggttctagtctccatacaaggtctaatcttgaatgcaaagccttacttcaatgaacctggatgggcaccttcaaagggcacaccgggcgg |
400 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| || |
|
|
| T |
41432170 |
caatgctacaagttctagtctccatacaaggtctaatcttgaatgcaaagccttacttcaatgaacctggatgggcaccttcgaagggcaaaccgggtgg |
41432269 |
T |
|
| Q |
401 |
tgaagctagttccctgcagtataat |
425 |
Q |
| |
|
|||||| | |||||||||||||||| |
|
|
| T |
41432270 |
tgaagcgaattccctgcagtataat |
41432294 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 372
Target Start/End: Original strand, 41442479 - 41442848
Alignment:
| Q |
1 |
agaagggactccttaccatgatggacttttcttttttgatgtttactttccccctggatatcccaatggacccccggtatgtggttgaggatactttatc |
100 |
Q |
| |
|
||||||||||||||||||||| || ||||||||||||||||| ||||||| |||| |||||||||| |||||||||| |||||| || |||||||||| |
|
|
| T |
41442479 |
agaagggactccttaccatgacggtcttttcttttttgatgtacactttccaactggctatcccaatgtacccccggtacgtggttaagaatactttatc |
41442578 |
T |
|
| Q |
101 |
tgactgacgttattttctagttcactcatttaaattcaattccgacaaactggtccannnnnnnncatggcagcaggtccactaccactctggtggtctt |
200 |
Q |
| |
|
|||| |||||| |||||| ||| |||| ||| |||||||||| ||||| |||| | ||||||| ||||||||||||||| | |||||| |
|
|
| T |
41442579 |
tgacagacgttgttttcttgttaactctttttaattcaattctaacaaaagggtc--gttattttcgtggcagctagtccactaccactctagaggtctt |
41442676 |
T |
|
| Q |
201 |
cggctcaaccctaatttgtatgcctgtggcaaagtatgcctcagtctacttaacacctggtcaggcgacaaaaatcagatgtggactccatgtgtttcga |
300 |
Q |
| |
|
|| ||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||| ||||| ||||||||| |
|
|
| T |
41442677 |
cgactcaaccctaatttgtatggctgtggtaaagtatgcctcagtctacttaacacctggtctggcgacagaaatcagatgtgggctccaggtgtttcga |
41442776 |
T |
|
| Q |
301 |
caatgctacaggttctagtctccatacaaggtctaatcttgaatgcaaagccttacttcaatgaacctggat |
372 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||||||| || |||||||||| ||||||||||||| |
|
|
| T |
41442777 |
caatgctacaggttctagtctccataaaaggtctaatcttgaacgcgaagccttactataatgaacctggat |
41442848 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 3 - 369
Target Start/End: Original strand, 41426481 - 41426844
Alignment:
| Q |
3 |
aagggactccttaccatgatggacttttcttttttgatgtttactttccccctggatatcccaatggacccccggtatgtggttgaggatactttatctg |
102 |
Q |
| |
|
||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| || |
|
|
| T |
41426481 |
aagggactccttaccatgacagtcttttcttttttgatgtttactttccccctggatatcccaatgaacccccggtatgtggttgagaatactttatttg |
41426580 |
T |
|
| Q |
103 |
actgacgttattttctagttcactcatttaaattcaattccgacaaactggtccannnnnnnncatggcagcaggtccactaccactctggtggtcttcg |
202 |
Q |
| |
|
| || |||||| || |||||||| ||| ||||||||||||||||| || | | | |||||||| ||||||||||| ||||| |||||| | |
|
|
| T |
41426581 |
gccgatattattt-cttgttcactctttttaattcaattccgacaaa-tgata-actttttttcgtggcagcaagtccactaccattctggaggtcttgg |
41426677 |
T |
|
| Q |
203 |
gctcaaccctaatttgtatgcctgtggcaaagtatgcctcagtctacttaacacctggtcaggcgacaaaaatcagatgtggactccatgtgtttcgaca |
302 |
Q |
| |
|
|||||||||||||||||| | ||||| | || ||||||||||||||| ||||||| |||||| | || |||||||||||||| ||||||| ||| |
|
|
| T |
41426678 |
actcaaccctaatttgtatagcagtggctatgtttgcctcagtctacttggcacctgggagggcgacgaggatgagatgtggactccaggtgtttcaaca |
41426777 |
T |
|
| Q |
303 |
atgctacaggttctagtctccatacaaggtctaatcttgaatgcaaagccttacttcaatgaacctg |
369 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||| |
|
|
| T |
41426778 |
atgctacaagttctagtctccatacaaggtctaatcttgaacgcaaagccttactttaatgaacctg |
41426844 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 166 - 372
Target Start/End: Original strand, 41449250 - 41449456
Alignment:
| Q |
166 |
catggcagcaggtccactaccactctggtggtcttcggctcaaccctaatttgtatgcctgtggcaaagtatgcctcagtctacttaacacctggtcagg |
265 |
Q |
| |
|
|||||||||| ||||| ||||||||||| || ||| |||||||||||||||||||||| | ||| ||||||| ||||||||||||| ||||||||| || |
|
|
| T |
41449250 |
catggcagcaagtccattaccactctggcggccttgggctcaaccctaatttgtatgcttctgggaaagtatccctcagtctacttgacacctggtttgg |
41449349 |
T |
|
| Q |
266 |
cgacaaaaatcagatgtggactccatgtgtttcgacaatgctacaggttctagtctccatacaaggtctaatcttgaatgcaaagccttacttcaatgaa |
365 |
Q |
| |
|
| |||| |||||| ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| |
|
|
| T |
41449350 |
caacaaggatcagaaatggactccaggtgtttcaacaatgctacaggttctagtctccatacaaggtctaatcttgaacgcaaagccttactataatgaa |
41449449 |
T |
|
| Q |
366 |
cctggat |
372 |
Q |
| |
|
||||||| |
|
|
| T |
41449450 |
cctggat |
41449456 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 41448910 - 41449006
Alignment:
| Q |
1 |
agaagggactccttaccatgatggacttttcttttttgatgtttactttcccc-ctggatatcccaatggacccccggtatgtggttgaggatactt |
96 |
Q |
| |
|
||||| ||||||||||||| | || |||||||||||||||||||||||||||| ||||||||||||||| |||||| |||||||||||||||||||| |
|
|
| T |
41448910 |
agaagagactccttaccataacggtcttttcttttttgatgtttactttcccccctggatatcccaatgtacccccagtatgtggttgaggatactt |
41449006 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 306 - 358
Target Start/End: Complemental strand, 7237942 - 7237890
Alignment:
| Q |
306 |
ctacaggttctagtctccatacaaggtctaatcttgaatgcaaagccttactt |
358 |
Q |
| |
|
||||||||| |||||||||||||||||||| |||||| |||||| |||||||| |
|
|
| T |
7237942 |
ctacaggttatagtctccatacaaggtctagtcttgactgcaaaaccttactt |
7237890 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0648 (Bit Score: 164; Significance: 2e-87; HSPs: 1)
Name: scaffold0648
Description:
Target: scaffold0648; HSP #1
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 1 - 372
Target Start/End: Original strand, 5967 - 6335
Alignment:
| Q |
1 |
agaagggactccttaccatgatggacttttcttttttgatgtttactttccccctggatatcccaatggacccccggtatgtggttgaggatactttatc |
100 |
Q |
| |
|
||||||||||||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||| ||||||||| |
|
|
| T |
5967 |
agaagggactccttaccatgacggtcttttcttttttgatgtttactttccccctgaatatcccaatgaacccccggtatgtggttgagaatactttatt |
6066 |
T |
|
| Q |
101 |
tgactgacgttattttctagttcactcatttaaattcaattccgacaaactggtccannnnnnnncatggcagcaggtccactaccactctggtggtctt |
200 |
Q |
| |
|
|| | || |||||| || |||||||| ||| ||||||||||||||||| ||||| | | |||||||| ||||||||||| ||||| |||||| |
|
|
| T |
6067 |
tggcagatattattt-cttgttcactctttttaattcaattccgacaaa-tggtc-actttttttcgtggcagcaagtccactaccattctggaggtctt |
6163 |
T |
|
| Q |
201 |
cggctcaaccctaatttgtatgcctgtggcaaagtatgcctcagtctacttaacacctggtcaggcgacaaaaatcagatgtggactccatgtgtttcga |
300 |
Q |
| |
|
| ||||||||||||||||| | ||||| | || ||||||||||||||| ||||||| |||||| | || |||||||||||||| ||||||| | |
|
|
| T |
6164 |
ggagtcaaccctaatttgtatagcagtggctatgtttgcctcagtctacttggcacctgggagggcgacgaggatgagatgtggactccaggtgtttcaa |
6263 |
T |
|
| Q |
301 |
caatgctacaggttctagtctccatacaaggtctaatcttgaatgcaaagccttacttcaatgaacctggat |
372 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| |
|
|
| T |
6264 |
caatgctacaagttctagtctccatacaaggtctaatcttgaacgcaaagccttactttaatgaacctggat |
6335 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0274 (Bit Score: 164; Significance: 2e-87; HSPs: 1)
Name: scaffold0274
Description:
Target: scaffold0274; HSP #1
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 1 - 372
Target Start/End: Complemental strand, 17491 - 17123
Alignment:
| Q |
1 |
agaagggactccttaccatgatggacttttcttttttgatgtttactttccccctggatatcccaatggacccccggtatgtggttgaggatactttatc |
100 |
Q |
| |
|
||||||||||||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||| ||||||||| |
|
|
| T |
17491 |
agaagggactccttaccatgacggtcttttcttttttgatgtttactttccccctgaatatcccaatgaacccccggtatgtggttgagaatactttatt |
17392 |
T |
|
| Q |
101 |
tgactgacgttattttctagttcactcatttaaattcaattccgacaaactggtccannnnnnnncatggcagcaggtccactaccactctggtggtctt |
200 |
Q |
| |
|
|| | || |||||| || |||||||| ||| ||||||||||||||||| ||||| | | |||||||| ||||||||||| ||||| |||||| |
|
|
| T |
17391 |
tggcagatattattt-cttgttcactctttttaattcaattccgacaaa-tggtc-actttttttcgtggcagcaagtccactaccattctggaggtctt |
17295 |
T |
|
| Q |
201 |
cggctcaaccctaatttgtatgcctgtggcaaagtatgcctcagtctacttaacacctggtcaggcgacaaaaatcagatgtggactccatgtgtttcga |
300 |
Q |
| |
|
| ||||||||||||||||| | ||||| | || ||||||||||||||| ||||||| |||||| | || |||||||||||||| ||||||| | |
|
|
| T |
17294 |
ggagtcaaccctaatttgtatagcagtggctatgtttgcctcagtctacttggcacctgggagggcgacgaggatgagatgtggactccaggtgtttcaa |
17195 |
T |
|
| Q |
301 |
caatgctacaggttctagtctccatacaaggtctaatcttgaatgcaaagccttacttcaatgaacctggat |
372 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| |
|
|
| T |
17194 |
caatgctacaagttctagtctccatacaaggtctaatcttgaacgcaaagccttactttaatgaacctggat |
17123 |
T |
|
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Target: chr7 (Bit Score: 101; Significance: 6e-50; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 168 - 364
Target Start/End: Complemental strand, 7762885 - 7762689
Alignment:
| Q |
168 |
tggcagcaggtccactaccactctggtggtcttcggctcaaccctaatttgtatgcctgtggcaaagtatgcctcagtctacttaacacctggtcaggcg |
267 |
Q |
| |
|
|||||||| || |||||||||||||||||||| ||||||| || |||||||||| |||| | ||||||||||||||||||||||||||| |||| |
|
|
| T |
7762885 |
tggcagcaactcgactaccactctggtggtcttgggctcaatccaaatttgtatgaaaatggctatgtatgcctcagtctacttaacacctgggttggcg |
7762786 |
T |
|
| Q |
268 |
acaaaaatcagatgtggactccatgtgtttcgacaatgctacaggttctagtctccatacaaggtctaatcttgaatgcaaagccttacttcaatga |
364 |
Q |
| |
|
|| | || |||||||||||||| ||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
7762785 |
acgacgatgagatgtggactccaggtgtttcgacaatgcatcaggttctcgtctccatacaaggtctaatcttgaatgcaaagccttactttaatga |
7762689 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 3 - 106
Target Start/End: Complemental strand, 7763028 - 7762925
Alignment:
| Q |
3 |
aagggactccttaccatgatggacttttcttttttgatgtttactttccccctggatatcccaatggacccccggtatgtggttgaggatactttatctg |
102 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||| | ||||||||||||| ||||||| ||| |||||||||| |||||||| ||||||||||| |
|
|
| T |
7763028 |
aagggactccttaccatgatggtcttttcttttttgatttatactttccccctgaatatcccgatgaacccccggtacgtggttgaaactactttatctg |
7762929 |
T |
|
| Q |
103 |
actg |
106 |
Q |
| |
|
|||| |
|
|
| T |
7762928 |
actg |
7762925 |
T |
|
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Target: chr8 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 181 - 372
Target Start/End: Complemental strand, 21223715 - 21223524
Alignment:
| Q |
181 |
actaccactctggtggtcttcggctcaaccctaatttgtatgcctgtggcaaagtatgcctcagtctacttaacacctggtcaggcgacaaaaatcagat |
280 |
Q |
| |
|
|||||||||||||||| ||||| |||||||| ||||| ||| ||||||||||| || || || ||||||||||||||||| ||| | || ||| ||| |
|
|
| T |
21223715 |
actaccactctggtggacttcgactcaacccaaatttatataattgtggcaaagtttgtcttagcctacttaacacctggtctggcaataagaatgagaa |
21223616 |
T |
|
| Q |
281 |
gtggactccatgtgtttcgacaatgctacaggttctagtctccatacaaggtctaatcttgaatgcaaagccttacttcaatgaacctggat |
372 |
Q |
| |
|
|||| ||| ||||||| ||||| ||||||| || ||||||||||||||||||||||||||| ||| ||||||||| ||||| ||||||| |
|
|
| T |
21223615 |
gtggctcccaggtgtttcaacaattttacaggtcctggtctccatacaaggtctaatcttgaatacaatgccttactttaatgagcctggat |
21223524 |
T |
|
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