View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8436_low_1 (Length: 676)

Name: NF8436_low_1
Description: NF8436
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8436_low_1
NF8436_low_1
[»] chr6 (20 HSPs)
chr6 (102-660)||(31974128-31974704)
chr6 (9-93)||(26670026-26670110)
chr6 (9-93)||(7273352-7273436)
chr6 (9-95)||(9698350-9698436)
chr6 (9-93)||(26466798-26466882)
chr6 (9-90)||(24204004-24204085)
chr6 (9-93)||(7292746-7292830)
chr6 (9-93)||(7367548-7367632)
chr6 (9-92)||(13743238-13743321)
chr6 (9-92)||(13748738-13748821)
chr6 (9-92)||(30014343-30014426)
chr6 (9-90)||(30735984-30736065)
chr6 (9-93)||(3213399-3213483)
chr6 (9-95)||(21279926-21280012)
chr6 (9-97)||(21293694-21293782)
chr6 (9-93)||(33242402-33242486)
chr6 (9-90)||(27441544-27441625)
chr6 (15-95)||(31109245-31109325)
chr6 (9-92)||(33253913-33253996)
chr6 (450-544)||(28973924-28974018)
[»] chr3 (29 HSPs)
chr3 (286-582)||(20488011-20488324)
chr3 (9-92)||(42100688-42100771)
chr3 (9-93)||(46941052-46941136)
chr3 (9-93)||(40808864-40808948)
chr3 (9-95)||(25413678-25413764)
chr3 (9-91)||(54237097-54237179)
chr3 (9-93)||(24688419-24688503)
chr3 (9-93)||(47191043-47191126)
chr3 (9-93)||(54246165-54246249)
chr3 (9-92)||(45126945-45127028)
chr3 (9-91)||(42394436-42394518)
chr3 (9-93)||(53273701-53273785)
chr3 (9-90)||(27748565-27748646)
chr3 (9-92)||(36150130-36150213)
chr3 (9-91)||(40480750-40480832)
chr3 (9-95)||(53581875-53581961)
chr3 (9-90)||(1078229-1078309)
chr3 (9-94)||(25996266-25996351)
chr3 (9-93)||(4190282-4190366)
chr3 (9-93)||(9434123-9434207)
chr3 (9-93)||(10457909-10457993)
chr3 (9-93)||(29558251-29558335)
chr3 (9-93)||(52627994-52628078)
chr3 (9-92)||(34791829-34791912)
chr3 (9-92)||(51757593-51757676)
chr3 (431-545)||(12881038-12881154)
chr3 (10-93)||(11064740-11064821)
chr3 (9-50)||(52629870-52629911)
chr3 (9-77)||(51249323-51249391)
[»] chr1 (28 HSPs)
chr1 (9-92)||(43571103-43571186)
chr1 (9-93)||(5489775-5489859)
chr1 (9-93)||(48498979-48499063)
chr1 (9-95)||(4401324-4401411)
chr1 (9-92)||(37814778-37814861)
chr1 (10-95)||(750323-750408)
chr1 (16-93)||(24769523-24769600)
chr1 (9-93)||(44112676-44112760)
chr1 (9-92)||(38335918-38336001)
chr1 (9-92)||(48119628-48119711)
chr1 (12-92)||(50448280-50448360)
chr1 (9-92)||(35003294-35003377)
chr1 (9-90)||(2497579-2497660)
chr1 (9-90)||(7447828-7447908)
chr1 (9-94)||(41065151-41065236)
chr1 (447-541)||(37627430-37627524)
chr1 (9-95)||(45427762-45427848)
chr1 (9-93)||(23989540-23989625)
chr1 (9-94)||(38113212-38113297)
chr1 (9-93)||(45639749-45639833)
chr1 (9-92)||(46168383-46168466)
chr1 (35-93)||(14427346-14427404)
chr1 (11-93)||(26585461-26585543)
chr1 (9-50)||(4888085-4888126)
chr1 (9-94)||(45705823-45705908)
chr1 (482-582)||(15918055-15918154)
chr1 (9-92)||(35000130-35000213)
chr1 (40-92)||(51898601-51898653)
[»] scaffold0119 (1 HSPs)
scaffold0119 (9-93)||(684-768)
[»] chr8 (33 HSPs)
chr8 (9-90)||(42295197-42295278)
chr8 (9-93)||(36743500-36743584)
chr8 (9-92)||(11582766-11582849)
chr8 (9-92)||(29705362-29705445)
chr8 (12-93)||(30660762-30660843)
chr8 (9-90)||(30912579-30912660)
chr8 (9-94)||(42197452-42197537)
chr8 (9-93)||(5754902-5754986)
chr8 (9-96)||(2546992-2547079)
chr8 (9-96)||(29800967-29801054)
chr8 (10-92)||(2165981-2166063)
chr8 (9-91)||(45397317-45397399)
chr8 (9-90)||(42699259-42699340)
chr8 (9-96)||(20148756-20148843)
chr8 (9-90)||(26125637-26125718)
chr8 (9-93)||(35181515-35181599)
chr8 (9-96)||(31384660-31384747)
chr8 (406-600)||(12521267-12521456)
chr8 (9-93)||(34304787-34304871)
chr8 (9-92)||(1375542-1375625)
chr8 (9-94)||(18066735-18066820)
chr8 (9-90)||(33630010-33630091)
chr8 (9-95)||(16603643-16603729)
chr8 (55-92)||(28977146-28977183)
chr8 (292-403)||(12521137-12521247)
chr8 (9-95)||(40528651-40528738)
chr8 (483-545)||(33168353-33168415)
chr8 (9-90)||(3743773-3743854)
chr8 (9-50)||(9241594-9241635)
chr8 (483-528)||(17315363-17315408)
chr8 (483-528)||(17337274-17337319)
chr8 (57-93)||(19386635-19386671)
chr8 (40-92)||(37038609-37038661)
[»] chr7 (30 HSPs)
chr7 (9-94)||(35069719-35069804)
chr7 (9-92)||(24001029-24001112)
chr7 (9-92)||(42538448-42538531)
chr7 (9-93)||(5015394-5015478)
chr7 (9-92)||(5810941-5811024)
chr7 (9-92)||(42972852-42972935)
chr7 (9-96)||(44326174-44326261)
chr7 (9-94)||(5194248-5194333)
chr7 (9-90)||(43343641-43343722)
chr7 (9-90)||(44416951-44417032)
chr7 (9-96)||(43317439-43317526)
chr7 (9-92)||(45326020-45326103)
chr7 (9-95)||(9216299-9216384)
chr7 (9-90)||(4638216-4638297)
chr7 (9-90)||(10573751-10573832)
chr7 (12-89)||(26898422-26898499)
chr7 (9-93)||(40236918-40237002)
chr7 (12-83)||(32029837-32029908)
chr7 (9-92)||(31513287-31513370)
chr7 (9-93)||(41861673-41861759)
chr7 (9-95)||(16180374-16180459)
chr7 (431-583)||(10234630-10234784)
chr7 (9-76)||(27393277-27393344)
chr7 (9-95)||(24280613-24280699)
chr7 (9-91)||(31408650-31408732)
chr7 (9-93)||(27535248-27535332)
chr7 (9-97)||(38160596-38160699)
chr7 (25-92)||(39998408-39998475)
chr7 (9-93)||(33384869-33384954)
chr7 (39-94)||(47279744-47279799)
[»] chr2 (33 HSPs)
chr2 (9-94)||(30838630-30838715)
chr2 (9-92)||(1750414-1750497)
chr2 (9-93)||(12302270-12302354)
chr2 (9-93)||(43335780-43335864)
chr2 (9-92)||(16096747-16096830)
chr2 (9-91)||(19047158-19047240)
chr2 (13-90)||(33229303-33229381)
chr2 (10-96)||(43490419-43490505)
chr2 (9-93)||(43114556-43114640)
chr2 (9-92)||(12415477-12415560)
chr2 (9-92)||(12427537-12427620)
chr2 (9-90)||(11825671-11825752)
chr2 (9-93)||(4764743-4764827)
chr2 (9-91)||(34817793-34817875)
chr2 (9-90)||(41281991-41282072)
chr2 (9-93)||(16803967-16804051)
chr2 (9-93)||(16843249-16843333)
chr2 (9-92)||(13780752-13780835)
chr2 (9-95)||(18491702-18491788)
chr2 (9-93)||(966851-966935)
chr2 (9-90)||(6518486-6518566)
chr2 (9-97)||(8896600-8896688)
chr2 (9-93)||(34895758-34895842)
chr2 (483-545)||(24185325-24185387)
chr2 (9-96)||(42026763-42026852)
chr2 (9-92)||(42849875-42849946)
chr2 (9-90)||(4299437-4299518)
chr2 (10-94)||(14285674-14285758)
chr2 (12-90)||(7070418-7070496)
chr2 (434-548)||(31603507-31603621)
chr2 (407-445)||(41700297-41700335)
chr2 (9-54)||(4451967-4452012)
chr2 (13-54)||(39149313-39149354)
[»] chr4 (40 HSPs)
chr4 (9-93)||(1771283-1771367)
chr4 (9-93)||(33703140-33703224)
chr4 (9-93)||(25051692-25051776)
chr4 (9-92)||(35017733-35017815)
chr4 (10-92)||(27316731-27316813)
chr4 (9-90)||(43949818-43949900)
chr4 (12-92)||(27550309-27550389)
chr4 (9-93)||(27864563-27864647)
chr4 (9-93)||(28982839-28982923)
chr4 (9-93)||(55966363-55966447)
chr4 (9-90)||(39631102-39631184)
chr4 (9-90)||(43514703-43514784)
chr4 (9-94)||(48463467-48463552)
chr4 (12-92)||(12496956-12497036)
chr4 (10-93)||(28988472-28988555)
chr4 (9-91)||(41878407-41878489)
chr4 (9-90)||(27893859-27893940)
chr4 (9-93)||(23035979-23036063)
chr4 (9-93)||(711959-712043)
chr4 (9-89)||(23204795-23204875)
chr4 (9-92)||(17619169-17619252)
chr4 (9-90)||(43735744-43735825)
chr4 (9-92)||(55272393-55272476)
chr4 (9-90)||(3756263-3756344)
chr4 (9-90)||(31680904-31680985)
chr4 (9-94)||(32728355-32728440)
chr4 (9-95)||(48435596-48435682)
chr4 (12-93)||(960890-960971)
chr4 (9-90)||(35037007-35037088)
chr4 (10-94)||(21687004-21687088)
chr4 (13-92)||(41847971-41848050)
chr4 (9-92)||(45490330-45490413)
chr4 (12-94)||(49229684-49229766)
chr4 (12-50)||(51512285-51512323)
chr4 (9-90)||(41327560-41327641)
chr4 (9-93)||(46827723-46827807)
chr4 (41-96)||(30189269-30189324)
chr4 (486-581)||(31371696-31371790)
chr4 (40-95)||(50526086-50526141)
chr4 (9-54)||(19879992-19880037)
[»] chr5 (15 HSPs)
chr5 (9-92)||(2614666-2614749)
chr5 (9-92)||(22512305-22512388)
chr5 (9-92)||(41334680-41334763)
chr5 (9-93)||(7617132-7617216)
chr5 (9-93)||(18033981-18034065)
chr5 (9-93)||(33801468-33801552)
chr5 (17-92)||(33855068-33855143)
chr5 (9-92)||(32473411-32473494)
chr5 (9-90)||(5256997-5257078)
chr5 (10-90)||(25915006-25915085)
chr5 (9-93)||(38470578-38470662)
chr5 (9-96)||(17208070-17208157)
chr5 (434-602)||(16766449-16766618)
chr5 (9-95)||(39122450-39122535)
chr5 (9-93)||(30622736-30622819)
[»] scaffold0187 (2 HSPs)
scaffold0187 (9-95)||(14205-14291)
scaffold0187 (9-95)||(24533-24619)
[»] scaffold0038 (1 HSPs)
scaffold0038 (9-91)||(112656-112738)
[»] scaffold0385 (1 HSPs)
scaffold0385 (9-93)||(11250-11334)
[»] scaffold0157 (1 HSPs)
scaffold0157 (12-92)||(23441-23521)
[»] scaffold0003 (1 HSPs)
scaffold0003 (9-90)||(45736-45817)
[»] scaffold0100 (1 HSPs)
scaffold0100 (9-92)||(35473-35556)


Alignment Details
Target: chr6 (Bit Score: 401; Significance: 0; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 401; E-Value: 0
Query Start/End: Original strand, 102 - 660
Target Start/End: Complemental strand, 31974704 - 31974128
Alignment:
Q  102 tttgacaacccctatgttgaattggattaagtgtaatatagatggtgtcgcatctggtactccacctataactgcttttgaatgtattttcaggaacaac 201  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||| |||||| ||||||||| ||||||||     
T  31974704 tttgacaactcctatgttgaattggattaagtgtaatatagatggtgtcgcaccttgtactccacctataactacttttgcatgtatttttaggaacaat 31974605  T
Q  202 gaatctcactctttaggttgcattgcaggtattttctatggttctaggctataaatatacctcgtttatgaggcattgggacatctttagacttgtaaac 301  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||| |    
T  31974604 gaatctcactctttaggttgcattgcaggtattttctatggttctaggctataaatattcctcatttatgaggcattgggacatctttagacttgtaatc 31974505  T
Q  302 tcactgcaaagttgaatacaagttcttgatgttttcttaagcttttcttctttatttgcattcctttgcttccttgtctctattttatgttctt------ 395  Q
      ||| ||||||||||  |||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||          
T  31974504 ctactccaaagttgaaatcaagttgttgaagttttcttaagcttttcttctttatttgcattcctttgcttccttgtctctattttatgttctttacaat 31974405  T
Q  396 ----------tacatttcagctctttatcgctttgttttcattctgtcatttacttttatatcatttacttttatgtcttcatcttctactccctcatct 485  Q
              |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  | ||||||||    
T  31974404 ttcagtactttacatttcagttctttatcgctttgttttcattctgtcatttacttttatatcatttacttttatgtcttcatcttctgttacctcatct 31974305  T
Q  486 actatgatcatgtatgagtagacttttctagtcttgagattgtgggaattatctaatgatggacccttaaacaatctcaagtctagactctattttatta 585  Q
    ||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  31974304 actatgatcatgtatgagtagacttttctagtcctgggattgtgggaattatctaatgatggacccttaaacaatctcaagtctagactctcttttatta 31974205  T
Q  586 tagttcctattctaatccaagctcaaagcataaagggtat--aggtttaggtttcaggcacttatttcactttaatt 660  Q
    || ||||||||||||| ||||||||||||| |||||||||  |||||| ||||||||||||||||||||||||||||    
T  31974204 tatttcctattctaattcaagctcaaagcagaaagggtatggaggtttgggtttcaggcacttatttcactttaatt 31974128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 9 - 93
Target Start/End: Original strand, 26670026 - 26670110
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcct 93  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  26670026 gtgagatgaacttaccaaaatatccctaatacatgaggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcct 26670110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 9 - 93
Target Start/End: Original strand, 7273352 - 7273436
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcct 93  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  7273352 gtgagatgaacttaccaaaatatctctaatacatggggtgtacaataaggtgtaggaataaagggtgttcatgtaacattttcct 7273436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 9 - 95
Target Start/End: Original strand, 9698350 - 9698436
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcctat 95  Q
    |||||||||||||||||||||||||||||||||| |||||||||||| | |||||||||||||||||||||||||||||||||||||    
T  9698350 gtgagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacattttcctat 9698436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 9 - 93
Target Start/End: Complemental strand, 26466882 - 26466798
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcct 93  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||| ||||||||||||||||||||| |||||||||||||||    
T  26466882 gtgagatgaacttaccaaaataaccctaatacatggagtgtacaatggggtgtaggaataaagggtgtttatgtaacattttcct 26466798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 9 - 90
Target Start/End: Original strand, 24204004 - 24204085
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacatttt 90  Q
    |||||||||||||||||||||||||||||||||||| |||||||||  |||||||||||||| |||||||||||||||||||    
T  24204004 gtgagatgaacttaccaaaatatccctaatacatggagtgtacaatagggtgtaggaataaatggtgttcatgtaacatttt 24204085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 9 - 93
Target Start/End: Complemental strand, 7292830 - 7292746
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcct 93  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||||||||||| ||||||| ||||||| ||||||||||||||    
T  7292830 gtgagatgaacttaccaaaatatccctaatacatagggtgtataatgaggtgtatgaataaatggtgttcttgtaacattttcct 7292746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 9 - 93
Target Start/End: Complemental strand, 7367632 - 7367548
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcct 93  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||| | ||||||| ||||||||||||    
T  7367632 gtgagatgaacttaccaaaatatccctaatacatgggatgtacaatgaggtgtatgaataaatgatgttcatataacattttcct 7367548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 9 - 92
Target Start/End: Original strand, 13743238 - 13743321
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 92  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  | |||| ||||||| |||||||||||||||||||||    
T  13743238 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaattggatgtatgaataaaaggtgttcatgtaacattttcc 13743321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 9 - 92
Target Start/End: Original strand, 13748738 - 13748821
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 92  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  | |||| ||||||| |||||||||||||||||||||    
T  13748738 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaattggatgtatgaataaaaggtgttcatgtaacattttcc 13748821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 9 - 92
Target Start/End: Complemental strand, 30014426 - 30014343
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 92  Q
    ||||||||||||||||||||||| ||||||||||||| |||| |||| | ||||||||||||||||||||||||||||||||||    
T  30014426 gtgagatgaacttaccaaaatatgcctaatacatgggatgtataatgggatgtaggaataaagggtgttcatgtaacattttcc 30014343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 9 - 90
Target Start/End: Complemental strand, 30736065 - 30735984
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacatttt 90  Q
    |||||||||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||  ||||||||||||||||||    
T  30736065 gtgagatgaacttaccaaaatatcactaatacatgaggtgtacaatggggtgtaggaataaaaagtgttcatgtaacatttt 30735984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 9 - 93
Target Start/End: Complemental strand, 3213483 - 3213399
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcct 93  Q
    |||| ||||| |||||||||||||| ||||||||||||||||||||||| |||| |||||||||||||| |||||||||||||||    
T  3213483 gtgaaatgaatttaccaaaatatccttaatacatggggtgtacaatgagatgtatgaataaagggtgtttatgtaacattttcct 3213399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 9 - 95
Target Start/End: Complemental strand, 21280012 - 21279926
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcctat 95  Q
    |||||||||| |||||||||||||||||||||||||| ||| |||||   ||||| |||||||||||||||||||||||||||||||    
T  21280012 gtgagatgaatttaccaaaatatccctaatacatgggatgtgcaatggaatgtagaaataaagggtgttcatgtaacattttcctat 21279926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 9 - 97
Target Start/End: Original strand, 21293694 - 21293782
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcctatta 97  Q
    |||| ||||| |||||||||||||| |||||||||||||||||| |||  |||| |||||||||||||| |||||||||||||||||||    
T  21293694 gtgaaatgaatttaccaaaatatccttaatacatggggtgtacagtgaaatgtatgaataaagggtgtttatgtaacattttcctatta 21293782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 9 - 93
Target Start/End: Complemental strand, 33242486 - 33242402
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcct 93  Q
    |||||||||| |||||||||| ||| |||||||||||||||||||| ||||||| || |||| ||||||||||||||||||||||    
T  33242486 gtgagatgaatttaccaaaatgtccttaatacatggggtgtacaataaggtgtatgattaaatggtgttcatgtaacattttcct 33242402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 9 - 90
Target Start/End: Complemental strand, 27441625 - 27441544
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacatttt 90  Q
    |||||||||| |||||||||||||| |||||||| || ||||||||  |||||| || ||||||||||||||||||||||||    
T  27441625 gtgagatgaatttaccaaaatatccttaatacataggatgtacaatagggtgtatgattaaagggtgttcatgtaacatttt 27441544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 31109245 - 31109325
Alignment:
Q  15 tgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcctat 95  Q
    |||| ||| ||||||||||||| | ||||||||||| |||| | |||| || |||||||||||||||||||||||||||||    
T  31109245 tgaatttatcaaaatatccctagtgcatggggtgtataatgggatgtatgattaaagggtgttcatgtaacattttcctat 31109325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 9 - 92
Target Start/End: Complemental strand, 33253996 - 33253913
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 92  Q
    |||||||||| ||||||| || |||||||| |||||||||||||||  |||||  || |||| |||||||||||||||||||||    
T  33253996 gtgagatgaatttaccaatatgtccctaatgcatggggtgtacaatagggtgtgtgattaaatggtgttcatgtaacattttcc 33253913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 450 - 544
Target Start/End: Original strand, 28973924 - 28974018
Alignment:
Q  450 tttacttttatgtcttcatcttctactccctcatctactatgatcatgtatgagtagacttttctagtcttgagattgtgggaattatctaatga 544  Q
    |||||||| ||||||| || || || |||||  ||||||||||| |||| ||| | |||||||||| ||| |||||||| ||||| |||||||||    
T  28973924 tttactttcatgtctttatattttaatcccttttctactatgattatgtgtgaatggacttttctaatctcgagattgttggaataatctaatga 28974018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 105; Significance: 4e-52; HSPs: 29)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 286 - 582
Target Start/End: Complemental strand, 20488324 - 20488011
Alignment:
Q  286 ctttagacttgtaaactcactgcaaagttgaatacaagttcttgatgttttcttaagcttttcttctttatttgcattcctttgcttccttgtctctatt 385  Q
    |||||||||||||| |||||| ||||||||||| ||||||||||   ||||||||||||||| ||||||||||||||||  || ||| ||||| | ||||    
T  20488324 ctttagacttgtaatctcactccaaagttgaattcaagttcttgcaattttcttaagcttttgttctttatttgcattcagttacttacttgtatgtatt 20488225  T
Q  386 ttatgttcttt----------------acatttcagctctttatcgctttgttttcattctgtcatttacttttatatcatttacttttatg-tcttcat 468  Q
     | ||||||||                ||||||||| ||| ||| |||||| |||||||| | |||||||||||||||||| |||||||||| ||||| |    
T  20488224 ctctgttctttgcatttctagtactttacatttcagttctctattgctttgatttcattccgccatttacttttatatcatatacttttatggtcttcgt 20488125  T
Q  469 cttctactccctcatctactatgatcatgtatgagtagacttttctagtcttgagattgtgggaattatctaatgatggacccttaaacaatctcaagtc 568  Q
    ||| || |||||| |||||||||||||| ||||| ||||||| ||||||||||  ||| ||| ||||||||||||||||||||  |||||||| ||| ||    
T  20488124 cttttagtccctcgtctactatgatcatatatgaatagacttctctagtcttggtattttggaaattatctaatgatggacccccaaacaatcccaattc 20488025  T
Q  569 tagactctatttta 582  Q
    ||||||||||||||    
T  20488024 tagactctatttta 20488011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 9 - 92
Target Start/End: Complemental strand, 42100771 - 42100688
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 92  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42100771 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 42100688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 9 - 93
Target Start/End: Complemental strand, 46941136 - 46941052
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcct 93  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  46941136 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttcct 46941052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 9 - 93
Target Start/End: Complemental strand, 40808948 - 40808864
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcct 93  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||| |||||||||||||||    
T  40808948 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaataaatggtgttgatgtaacattttcct 40808864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 9 - 95
Target Start/End: Complemental strand, 25413764 - 25413678
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcctat 95  Q
    ||||||||||||||| ||||||||||||||||||  ||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  25413764 gtgagatgaacttacaaaaatatccctaatacataaggtgtacaatggggtgtaggaataaagggtgttcatgtaacattttcctat 25413678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 9 - 91
Target Start/End: Complemental strand, 54237179 - 54237097
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttc 91  Q
    |||||||||||||||||||||||||||||||||| |||||||||||| | |||||||||||||||||||||||||||||||||    
T  54237179 gtgagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacattttc 54237097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 9 - 93
Target Start/End: Original strand, 24688419 - 24688503
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcct 93  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||  |||||| |||||||||||||||||||||||||||||    
T  24688419 gtgagatgaacttaccaaaatatccctaatacatagggtgtacaatggagtgtagaaataaagggtgttcatgtaacattttcct 24688503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 9 - 93
Target Start/End: Original strand, 47191043 - 47191126
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcct 93  Q
    |||||||||||||| ||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  47191043 gtgagatgaacttatcaaaatatctctaatacatggg-tgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcct 47191126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 9 - 93
Target Start/End: Original strand, 54246165 - 54246249
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcct 93  Q
    ||||||||||||||| |||||||| ||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||    
T  54246165 gtgagatgaacttacaaaaatatctctaatacatagggtgtacaatggggtgtaggaataaagggtgttcatgtaacattttcct 54246249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 9 - 92
Target Start/End: Original strand, 45126945 - 45127028
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 92  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| | |||| |||||||||||||| ||||||||||||||    
T  45126945 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgggatgtatgaataaagggtgtttatgtaacattttcc 45127028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 9 - 91
Target Start/End: Original strand, 42394436 - 42394518
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttc 91  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||   |||||||||||||||||||||||||||||||||    
T  42394436 gtgagatgaacttaccaaaatatccctaatacatagggtgtacaatggaatgtaggaataaagggtgttcatgtaacattttc 42394518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 9 - 93
Target Start/End: Original strand, 53273701 - 53273785
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcct 93  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| | ||||||| ||||||||||||    
T  53273701 gtgagatgaacttaccaaaatatccctaatacatgggatgtacaatgaggtataggaataaatgatgttcatataacattttcct 53273785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 9 - 90
Target Start/End: Complemental strand, 27748646 - 27748565
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacatttt 90  Q
    ||||||||||||||||||||||||||||||||||  |||||| ||||||||||| ||||||| |||||||||||||||||||    
T  27748646 gtgagatgaacttaccaaaatatccctaatacataaggtgtataatgaggtgtatgaataaaaggtgttcatgtaacatttt 27748565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 9 - 92
Target Start/End: Complemental strand, 36150213 - 36150130
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 92  Q
    ||||||||||||||||||||||||||| |||||| ||||||| |||| |||||| ||||||||||| |||||||||||||||||    
T  36150213 gtgagatgaacttaccaaaatatccctgatacatagggtgtataatggggtgtatgaataaagggtattcatgtaacattttcc 36150130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 9 - 91
Target Start/End: Complemental strand, 40480832 - 40480750
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttc 91  Q
    |||||||||||||||||||||||||||||||||| || ||||||||| ||  || ||||||||||||||||||||||||||||    
T  40480832 gtgagatgaacttaccaaaatatccctaatacataggatgtacaatggggcatatgaataaagggtgttcatgtaacattttc 40480750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 9 - 95
Target Start/End: Original strand, 53581875 - 53581961
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcctat 95  Q
    |||||||||||||| ||||||||||||||||||| || |||||||||  ||||| |||||||| |||||||||||||||||| ||||    
T  53581875 gtgagatgaacttatcaaaatatccctaatacataggatgtacaatggagtgtatgaataaagagtgttcatgtaacatttttctat 53581961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 9 - 90
Target Start/End: Complemental strand, 1078309 - 1078229
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacatttt 90  Q
    ||||||||||| ||| ||||||||| ||||||||  |||||||||||||||| |||||||||||||||||||||||||||||    
T  1078309 gtgagatgaacctacaaaaatatcc-taatacattaggtgtacaatgaggtgcaggaataaagggtgttcatgtaacatttt 1078229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 9 - 94
Target Start/End: Complemental strand, 25996351 - 25996266
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttccta 94  Q
    |||||||||| |||||||||| ||| ||||| |||||||||||||| || |||| || ||||||||||||||||||||||||||||    
T  25996351 gtgagatgaatttaccaaaatgtccttaatatatggggtgtacaataagatgtatgattaaagggtgttcatgtaacattttccta 25996266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 9 - 93
Target Start/End: Original strand, 4190282 - 4190366
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcct 93  Q
    |||||||||| ||||||||||||| |||||||||  ||||||||||  |||||| || |||||||||||||||||||||||||||    
T  4190282 gtgagatgaatttaccaaaatatctctaatacataaggtgtacaatagggtgtatgattaaagggtgttcatgtaacattttcct 4190366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 9 - 93
Target Start/End: Complemental strand, 9434207 - 9434123
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcct 93  Q
    |||||||||| |||||||||| |||||||| |||||||||||||||   ||||| || |||||||||||||||||||||||||||    
T  9434207 gtgagatgaaattaccaaaatgtccctaatgcatggggtgtacaatagagtgtatgattaaagggtgttcatgtaacattttcct 9434123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 9 - 93
Target Start/End: Original strand, 10457909 - 10457993
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcct 93  Q
    ||||||| || |||||||||||||| |||| |||||||||||||||  |||||| || |||| ||||||||||||||||||||||    
T  10457909 gtgagataaatttaccaaaatatccttaatgcatggggtgtacaatagggtgtatgattaaaaggtgttcatgtaacattttcct 10457993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 9 - 93
Target Start/End: Original strand, 29558251 - 29558335
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcct 93  Q
    |||||||||| ||||||| |||| ||||||| || |||||||||||||| |||| ||||||||||||||||| ||||||| ||||    
T  29558251 gtgagatgaatttaccaatatattcctaatatatagggtgtacaatgagatgtatgaataaagggtgttcatataacattgtcct 29558335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 9 - 93
Target Start/End: Original strand, 52627994 - 52628078
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcct 93  Q
    |||||||||| |||||||||||| | |||| |||| ||||||||||  | |||| || ||||||||||||| |||||||||||||    
T  52627994 gtgagatgaatttaccaaaatatacttaatgcatgaggtgtacaataggatgtatgattaaagggtgttcacgtaacattttcct 52628078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 9 - 92
Target Start/End: Complemental strand, 34791912 - 34791829
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 92  Q
    |||||||||| |||  ||||| |||||||| |||| ||| ||||||  |||||| || ||||||||||||||||||||||||||    
T  34791912 gtgagatgaaattattaaaatgtccctaatgcatgaggtttacaatatggtgtatgattaaagggtgttcatgtaacattttcc 34791829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 9 - 92
Target Start/End: Complemental strand, 51757676 - 51757593
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 92  Q
    |||||||||| |||| ||||| ||| |||| |||| ||||||||||  |||||| || ||||||||||| |||||| |||||||    
T  51757676 gtgagatgaaattactaaaatgtccataatgcatgaggtgtacaatagggtgtatgattaaagggtgtttatgtaatattttcc 51757593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 431 - 545
Target Start/End: Original strand, 12881038 - 12881154
Alignment:
Q  431 gtcatttacttttatatcatttacttttatgtcttcatct--tctactccctcatctactatgatcatgtatgagtagacttttctagtcttgagattgt 528  Q
    |||||||||||||||  | |||||||| ||||||| || |  | || |||||  |||||||||||||||  |||||||||||||||  ||||| ||||||    
T  12881038 gtcatttacttttatgccttttactttcatgtctttatatattttaatcccttgtctactatgatcatgggtgagtagacttttcttatcttgggattgt 12881137  T
Q  529 gggaattatctaatgat 545  Q
     ||||| || |||||||    
T  12881138 aggaataatttaatgat 12881154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 10 - 93
Target Start/End: Original strand, 11064740 - 11064821
Alignment:
Q  10 tgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcct 93  Q
    ||||||||| | | ||||||||| ||||  ||| ||||||||||||||||||| ||||||| | ||||||  ||||||||||||    
T  11064740 tgagatgaattaatcaaaatatctctaaagcatagggtgtacaatgaggtgtatgaataaatgatgttca--taacattttcct 11064821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 50
Target Start/End: Complemental strand, 52629911 - 52629870
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgta 50  Q
    ||||||||||||||| ||||||||| |||||||| |||||||    
T  52629911 gtgagatgaacttacaaaaatatccttaatacatagggtgta 52629870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 9 - 77
Target Start/End: Complemental strand, 51249391 - 51249323
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgtt 77  Q
    |||||||||| |||||||||||||| |||| |||| |||||| |||| | ||   ||||||||||||||    
T  51249391 gtgagatgaatttaccaaaatatccttaatgcatgaggtgtataatgggttgggtgaataaagggtgtt 51249323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 84; Significance: 1e-39; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 9 - 92
Target Start/End: Original strand, 43571103 - 43571186
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 92  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43571103 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 43571186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 9 - 93
Target Start/End: Complemental strand, 5489859 - 5489775
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcct 93  Q
    |||||||||||||||||||||||||||||||||| |||||||||||| | |||||||||||||||||||||||||||||||||||    
T  5489859 gtgagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacattttcct 5489775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 9 - 93
Target Start/End: Original strand, 48498979 - 48499063
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcct 93  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||  |||||| ||||||| |||||||||||||||||||||    
T  48498979 gtgagatgaacttaccaaaatatccctaatacatgaggtgtacaatggagtgtagaaataaagagtgttcatgtaacattttcct 48499063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 9 - 95
Target Start/End: Complemental strand, 4401411 - 4401324
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaat-aaagggtgttcatgtaacattttcctat 95  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||| ||||||||||| |||||| ||||    
T  4401411 gtgagatgaacttaccaaaatatctctaatacatggggtgtacaatgaagtgtaggaataaaagagtgttcatgtatcatttttctat 4401324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 9 - 92
Target Start/End: Complemental strand, 37814861 - 37814778
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 92  Q
    |||| ||||| |||||||||||||| ||||||||||||||||||||||| |||| |||||||||||||| ||||||||||||||    
T  37814861 gtgaaatgaatttaccaaaatatccttaatacatggggtgtacaatgagatgtatgaataaagggtgtttatgtaacattttcc 37814778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 10 - 95
Target Start/End: Original strand, 750323 - 750408
Alignment:
Q  10 tgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcctat 95  Q
    ||||||||| ||| |||||||||||| ||||||||||||||||||| ||||||||||  ||||||||||| |||||||||||||||    
T  750323 tgagatgaatttatcaaaatatccctgatacatggggtgtacaatggggtgtaggaaataagggtgttcacgtaacattttcctat 750408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 16 - 93
Target Start/End: Original strand, 24769523 - 24769600
Alignment:
Q  16 gaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcct 93  Q
    ||||||||||||||||||||||||||||||||||||||||  |||||| |||||| |||||||||| |||||||||||    
T  24769523 gaacttaccaaaatatccctaatacatggggtgtacaatggagtgtagaaataaaaggtgttcatgaaacattttcct 24769600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 9 - 93
Target Start/End: Complemental strand, 44112760 - 44112676
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcct 93  Q
    |||||||||| |||||||||| |||||||| |||||||||||||||  |||||| || |||||||||||||||||||||||||||    
T  44112760 gtgagatgaaattaccaaaatgtccctaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatgtaacattttcct 44112676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 9 - 92
Target Start/End: Complemental strand, 38336001 - 38335918
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 92  Q
    |||||||||| |||||||||||||| |||| |||||| |||||||| ||||||| || ||||||||||||||||||||||||||    
T  38336001 gtgagatgaatttaccaaaatatccttaatgcatgggatgtacaataaggtgtatgattaaagggtgttcatgtaacattttcc 38335918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 9 - 92
Target Start/End: Complemental strand, 48119711 - 48119628
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 92  Q
    |||||||||| |||||||||||||| |||| |||||||||||||||  |||||| || ||||||||||||||||||||||||||    
T  48119711 gtgagatgaatttaccaaaatatccttaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatgtaacattttcc 48119628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 12 - 92
Target Start/End: Original strand, 50448280 - 50448360
Alignment:
Q  12 agatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 92  Q
    |||||||||||| ||||||||||||||||||  |||||||||||  |||||| ||||||| ||||||||||||||||||||    
T  50448280 agatgaacttacaaaaatatccctaatacataaggtgtacaatggagtgtagaaataaagagtgttcatgtaacattttcc 50448360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 9 - 92
Target Start/End: Complemental strand, 35003377 - 35003294
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 92  Q
    |||||||||| |||||||||||||| ||||  ||||||||||||||  |||||| || ||||||||||||||||||||||||||    
T  35003377 gtgagatgaatttaccaaaatatccttaatgtatggggtgtacaatagggtgtatgattaaagggtgttcatgtaacattttcc 35003294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 9 - 90
Target Start/End: Original strand, 2497579 - 2497660
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacatttt 90  Q
    ||||||||||||||||||||||||| ||||| |||||||||||||||   |||| ||||||| |||||| ||||||||||||    
T  2497579 gtgagatgaacttaccaaaatatccttaatatatggggtgtacaatggaatgtatgaataaatggtgtttatgtaacatttt 2497660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 9 - 90
Target Start/End: Complemental strand, 7447908 - 7447828
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacatttt 90  Q
    |||||||||||||| |||||||||  ||||||||||| ||||||||| | |||||||||||||| |||||||||||||||||    
T  7447908 gtgagatgaacttatcaaaatatctgtaatacatggg-tgtacaatgggatgtaggaataaaggatgttcatgtaacatttt 7447828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 9 - 94
Target Start/End: Complemental strand, 41065236 - 41065151
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttccta 94  Q
    |||||||||| ||||||||||  ||||||| ||||||||||||||   |||||| || ||||||||||||||||||||||||||||    
T  41065236 gtgagatgaaattaccaaaatgcccctaatgcatggggtgtacaacagggtgtatgattaaagggtgttcatgtaacattttccta 41065151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 447 - 541
Target Start/End: Original strand, 37627430 - 37627524
Alignment:
Q  447 tcatttacttttatgtcttcatcttctactccctcatctactatgatcatgtatgagtagacttttctagtcttgagattgtgggaattatctaa 541  Q
    ||||||||||| ||||||| ||||| || || ||  |||||||||||||||| ||||||||| ||||||||||| ||||||| ||||| ||||||    
T  37627430 tcatttactttcatgtctttatcttttaatctcttgtctactatgatcatgtgtgagtagacatttctagtcttaagattgttggaataatctaa 37627524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 9 - 95
Target Start/End: Original strand, 45427762 - 45427848
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcctat 95  Q
    |||||||||| |||||||||| |||||||| ||||| |||||||||  |||||| || |||| ||| ||||||||||||||||||||    
T  45427762 gtgagatgaaattaccaaaatgtccctaatgcatggagtgtacaatagggtgtatgattaaaaggtattcatgtaacattttcctat 45427848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 9 - 93
Target Start/End: Original strand, 23989540 - 23989625
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaat-aaagggtgttcatgtaacattttcct 93  Q
    ||||||| || ||||||||||||||||||||||| |||| ||||||   ||||| |||| ||||||||||||||||||||||||||    
T  23989540 gtgagataaatttaccaaaatatccctaatacatagggtatacaattgagtgtatgaataaaagggtgttcatgtaacattttcct 23989625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 9 - 94
Target Start/End: Original strand, 38113212 - 38113297
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttccta 94  Q
    |||||||||| |||||||||| ||  |||| |||||||||||||||  |||||| || |||||||||||||| |||||||||||||    
T  38113212 gtgagatgaatttaccaaaatgtcattaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatataacattttccta 38113297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 9 - 93
Target Start/End: Original strand, 45639749 - 45639833
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcct 93  Q
    |||||||||| |||||||||||||| ||||  ||||||||||||||  | |||| || ||||| |||||||||||||||||||||    
T  45639749 gtgagatgaatttaccaaaatatccttaatgtatggggtgtacaataggatgtatgattaaagagtgttcatgtaacattttcct 45639833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 9 - 92
Target Start/End: Complemental strand, 46168466 - 46168383
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 92  Q
    |||||||||| |||||||||||||| |||| ||| |||||||||||  | | || || ||||||||||||||||||||||||||    
T  46168466 gtgagatgaatttaccaaaatatccttaatgcattgggtgtacaataggatatatgattaaagggtgttcatgtaacattttcc 46168383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 35 - 93
Target Start/End: Complemental strand, 14427404 - 14427346
Alignment:
Q  35 taatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcct 93  Q
    |||| |||| ||||||||||  |||||| || |||||||||||||||||||||||||||    
T  14427404 taatgcatgaggtgtacaatagggtgtatgattaaagggtgttcatgtaacattttcct 14427346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 93
Target Start/End: Complemental strand, 26585543 - 26585461
Alignment:
Q  11 gagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcct 93  Q
    |||||||| |||| ||||||||| |||| |||||||||||||||   ||||| || |||||  ||||||| ||||||||||||    
T  26585543 gagatgaatttactaaaatatccttaatgcatggggtgtacaatatagtgtatgattaaagaatgttcatctaacattttcct 26585461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 50
Target Start/End: Complemental strand, 4888126 - 4888085
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgta 50  Q
    ||||||| ||||||||||||||||||||||||||||| ||||    
T  4888126 gtgagataaacttaccaaaatatccctaatacatgggatgta 4888085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 94
Target Start/End: Complemental strand, 45705908 - 45705823
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttccta 94  Q
    |||||||||| ||| |||||| ||| |||| ||||| |||||||||    |||| || |||||||||||||| |||||||||||||    
T  45705908 gtgagatgaatttatcaaaatgtccataatgcatggagtgtacaatagaatgtatgattaaagggtgttcatataacattttccta 45705823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 482 - 582
Target Start/End: Original strand, 15918055 - 15918154
Alignment:
Q  482 atctactatgatcatgtatgagtagacttttctagtcttgagattgtgggaattatctaatgatggacccttaaacaatctcaagtctagactctatttt 581  Q
    ||||||||||||| ||  |||||||||||| || || ||| |||||| ||||| |||||||||| ||  | ||| ||| ||||||||||||| |||||||    
T  15918055 atctactatgatcttgattgagtagactttccttgtattgggattgttggaataatctaatgattgaatcctaatcaa-ctcaagtctagaccctatttt 15918153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 92
Target Start/End: Original strand, 35000130 - 35000213
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 92  Q
    ||||||| || ||| |||||| |||||||||||||  || ||||||   ||||| || |||| |||||||||||||||||||||    
T  35000130 gtgagataaatttatcaaaatgtccctaatacatgaagtatacaatagagtgtatgattaaaaggtgttcatgtaacattttcc 35000213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 40 - 92
Target Start/End: Complemental strand, 51898653 - 51898601
Alignment:
Q  40 catggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 92  Q
    |||||||||||||| |  || ||| ||||||||||||| ||||||||||||||    
T  51898653 catggggtgtacaagggtgtatagaaataaagggtgtttatgtaacattttcc 51898601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 81; Significance: 9e-38; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 9 - 93
Target Start/End: Complemental strand, 768 - 684
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcct 93  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  768 gtgagatgaacttaccaaaatatccctaatacatgaggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcct 684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 78; Significance: 5e-36; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 9 - 90
Target Start/End: Complemental strand, 42295278 - 42295197
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacatttt 90  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  42295278 gtgagatgaacttaccaaaatatccctaatacatggagtgtacaatgaggtgtaggaataaagggtgttcatgtaacatttt 42295197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 9 - 93
Target Start/End: Original strand, 36743500 - 36743584
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcct 93  Q
    |||||||||||||||||||||||||||||||||| |||||||||||| | |||||||||||||||||||||||||||||||||||    
T  36743500 gtgagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacattttcct 36743584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 9 - 92
Target Start/End: Complemental strand, 11582849 - 11582766
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 92  Q
    |||||||||||||||||||||||||||||||||| |||||||||||| | ||||||||||||||||||||||||||||||||||    
T  11582849 gtgagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacattttcc 11582766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 9 - 92
Target Start/End: Complemental strand, 29705445 - 29705362
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 92  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  29705445 gtgagatgaacttatcaaaatatccctaatacatggggtgtacaatggggtgtagaaataaagggtgttcatgtaacattttcc 29705362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 12 - 93
Target Start/End: Original strand, 30660762 - 30660843
Alignment:
Q  12 agatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcct 93  Q
    ||||||||||||||||||||||||||||||| |||||||||||| | ||||| |||||||||||||||||||||||||||||    
T  30660762 agatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtagaaataaagggtgttcatgtaacattttcct 30660843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 9 - 90
Target Start/End: Original strand, 30912579 - 30912660
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacatttt 90  Q
    |||||||||||||||||||||| ||||||||||||  |||||||||| ||||||||||||||||||||||||||||||||||    
T  30912579 gtgagatgaacttaccaaaatacccctaatacatgaagtgtacaatggggtgtaggaataaagggtgttcatgtaacatttt 30912660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 9 - 94
Target Start/End: Original strand, 42197452 - 42197537
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttccta 94  Q
    |||||||||||||||||||||||||||||||||| | |||| ||||| |||||||||||||| |||||||||||||||||||||||    
T  42197452 gtgagatgaacttaccaaaatatccctaatacatagtgtgtgcaatggggtgtaggaataaatggtgttcatgtaacattttccta 42197537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 9 - 93
Target Start/End: Complemental strand, 5754986 - 5754902
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcct 93  Q
    ||||||||||||||||||||||||||||||| ||||| ||||||||| | |||||||||||| ||||||||||||||||||||||    
T  5754986 gtgagatgaacttaccaaaatatccctaatatatgggatgtacaatgggatgtaggaataaaaggtgttcatgtaacattttcct 5754902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 9 - 96
Target Start/End: Complemental strand, 2547079 - 2546992
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcctatt 96  Q
    ||||||||||||||| ||||||||||||||||||| |||||||||||  |||||| ||||||| ||||||||||||||||||||||||    
T  2547079 gtgagatgaacttactaaaatatccctaatacatgaggtgtacaatggagtgtagaaataaagagtgttcatgtaacattttcctatt 2546992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 9 - 96
Target Start/End: Original strand, 29800967 - 29801054
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcctatt 96  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| | |||| ||||||| |||||| |||||||||||| |||||    
T  29800967 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgggatgtatgaataaatggtgtttatgtaacatttttctatt 29801054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 10 - 92
Target Start/End: Original strand, 2165981 - 2166063
Alignment:
Q  10 tgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 92  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||| |||||||||||||| ||||||||||||| |||||||    
T  2165981 tgagatgaacttaccaaaatatctctaatacatggggtatacaatggggtgtaggaataaatggtgttcatgtaatattttcc 2166063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 9 - 91
Target Start/End: Complemental strand, 45397399 - 45397317
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttc 91  Q
    ||||||||||||||| |||||||||||||||||| ||||||| |||| ||||||||||||||||||||||| |||||||||||    
T  45397399 gtgagatgaacttacaaaaatatccctaatacatagggtgtagaatggggtgtaggaataaagggtgttcacgtaacattttc 45397317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 9 - 90
Target Start/End: Complemental strand, 42699340 - 42699259
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacatttt 90  Q
    ||||||||||||||| ||||||||| ||||||||  ||||||||||| ||||||||||||||||||||||||||||||||||    
T  42699340 gtgagatgaacttacaaaaatatccataatacataaggtgtacaatggggtgtaggaataaagggtgttcatgtaacatttt 42699259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 9 - 96
Target Start/End: Complemental strand, 20148843 - 20148756
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcctatt 96  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||| | |||| |||||||||||||| |||||||||||| |||||    
T  20148843 gtgagatgaacttaccaaaatatccctaatatatgaggtgtacaatgggatgtatgaataaagggtgtttatgtaacatttttctatt 20148756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 9 - 90
Target Start/End: Complemental strand, 26125718 - 26125637
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacatttt 90  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||   |||| |||||||||||||| ||||||||||||    
T  26125718 gtgagatgaacttaccaaaatatccctaatacatagggtgtacaatggaatgtatgaataaagggtgtttatgtaacatttt 26125637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 9 - 93
Target Start/End: Complemental strand, 35181599 - 35181515
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcct 93  Q
    |||||||||| |||||||||| |||||||| |||||||||||||||  |||||| || |||||||||||||||||||||||||||    
T  35181599 gtgagatgaaattaccaaaatgtccctaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatgtaacattttcct 35181515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 9 - 96
Target Start/End: Complemental strand, 31384747 - 31384660
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcctatt 96  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||    |||| ||||||||||||||||||||| | |||||||||    
T  31384747 gtgagatgaacttaccaaaatattcctaatacatggggtgtacaatagaatgtaagaataaagggtgttcatgtaatactttcctatt 31384660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 406 - 600
Target Start/End: Original strand, 12521267 - 12521456
Alignment:
Q  406 ctctttatcgctttgttttcattctgtcatttacttttatatcatttacttttatgtcttcatcttctactccctcatctactatgatcatgtatgagta 505  Q
    |||||||||||||||||||| |||  |||||||||||||| ||||||||||| ||||||| ||||| || ||| |  | || ||||||||||| |||||     
T  12521267 ctctttatcgctttgttttcgttccttcatttacttttatgtcatttactttcatgtctttatcttataatcctttgtatattatgatcatgtgtgagtg 12521366  T
Q  506 gacttttctagtcttgagattgtgggaattatctaatgatggacccttaaacaatctcaagtctagactctattttattatagttcctattctaa 600  Q
    ||||||||    || | | |||| ||||| || ||||||||||  | ||| ||||| |||||||||| |||||||||||  |||| |||||||||    
T  12521367 gacttttc----ctagtg-ttgttggaataatttaatgatggagtcctaatcaatcccaagtctagaatctattttatttgagtttctattctaa 12521456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 9 - 93
Target Start/End: Complemental strand, 34304871 - 34304787
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcct 93  Q
    |||||||||| |||||||||| |||||||| |||||||||||||||  |||||| || |||||| ||||||||||||||||||||    
T  34304871 gtgagatgaaattaccaaaatgtccctaatgcatggggtgtacaatagggtgtatgattaaaggatgttcatgtaacattttcct 34304787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 9 - 92
Target Start/End: Complemental strand, 1375625 - 1375542
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 92  Q
    ||||||| || |||||||||||||||||||| ||||||||||||||  |||||| ||||||| ||||||||||||| |||||||    
T  1375625 gtgagataaatttaccaaaatatccctaatatatggggtgtacaattgggtgtatgaataaaaggtgttcatgtaaaattttcc 1375542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 9 - 94
Target Start/End: Original strand, 18066735 - 18066820
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttccta 94  Q
    |||||||||| |||| ||||||||||||||||||||| ||||||||    |||| || ||||||||||||||||||||||||||||    
T  18066735 gtgagatgaaattactaaaatatccctaatacatgggatgtacaatagaatgtatgattaaagggtgttcatgtaacattttccta 18066820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 9 - 90
Target Start/End: Original strand, 33630010 - 33630091
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacatttt 90  Q
    |||||||||| |||| ||||| |||||||| ||| ||||||||||||||||||| || |||||||||||| |||||||||||    
T  33630010 gtgagatgaaattactaaaatgtccctaatgcatagggtgtacaatgaggtgtatgattaaagggtgttcgtgtaacatttt 33630091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 9 - 95
Target Start/End: Original strand, 16603643 - 16603729
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcctat 95  Q
    |||||||||| |||||||||| ||  |||| ||||||||||| ||| ||||||| || |||||||||| ||||||||||||||||||    
T  16603643 gtgagatgaatttaccaaaatgtctttaatgcatggggtgtataataaggtgtatgattaaagggtgtgcatgtaacattttcctat 16603729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 55 - 92
Target Start/End: Complemental strand, 28977183 - 28977146
Alignment:
Q  55 gaggtgtaggaataaagggtgttcatgtaacattttcc 92  Q
    ||||||||||||||||||||||||||||||||||||||    
T  28977183 gaggtgtaggaataaagggtgttcatgtaacattttcc 28977146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 292 - 403
Target Start/End: Original strand, 12521137 - 12521247
Alignment:
Q  292 acttgtaaactcactgcaaagttgaatacaagttcttgatgttttcttaagcttttcttctttatttgcattcctttgcttccttgtctctattttatgt 391  Q
    |||||||| || ||| ||||||||||  ||||||| | || |||| ||||| |||| ||||||||||||||| || | ||| |||| || |||||| |||    
T  12521137 acttgtaatcttactccaaagttgaaatcaagttcct-atatttttttaagtttttgttctttatttgcatttctgtactttcttgcctttattttttgt 12521235  T
Q  392 tctttacatttc 403  Q
    ||||||||||||    
T  12521236 tctttacatttc 12521247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 9 - 95
Target Start/End: Original strand, 40528651 - 40528738
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaat-aaagggtgttcatgtaacattttcctat 95  Q
    ||||||| || ||| |||||| ||||||||| ||||||||||||||| ||| |  |||| ||||||||||||||||  ||||||||||    
T  40528651 gtgagataaatttatcaaaatgtccctaatatatggggtgtacaatggggtttgtgaataaaagggtgttcatgtattattttcctat 40528738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 483 - 545
Target Start/End: Complemental strand, 33168415 - 33168353
Alignment:
Q  483 tctactatgatcatgtatgagtagacttttctagtcttgagattgtgggaattatctaatgat 545  Q
    ||||||||||||||   |||||| ||||||||||||| | |||||| ||||| ||||||||||    
T  33168415 tctactatgatcattagtgagtaaacttttctagtctcgtgattgttggaataatctaatgat 33168353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 90
Target Start/End: Complemental strand, 3743854 - 3743773
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacatttt 90  Q
    |||||||||||||| |||||||| | ||||| |||||||||| |||| |  | | |||||||||||||  ||| ||||||||    
T  3743854 gtgagatgaacttatcaaaatatacttaatatatggggtgtataatgggagggatgaataaagggtgtatatggaacatttt 3743773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 50
Target Start/End: Complemental strand, 9241635 - 9241594
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgta 50  Q
    ||||||||||||||| ||||||||||||||| || |||||||    
T  9241635 gtgagatgaacttacaaaaatatccctaatatatagggtgta 9241594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 483 - 528
Target Start/End: Complemental strand, 17315408 - 17315363
Alignment:
Q  483 tctactatgatcatgtatgagtagacttttctagtcttgagattgt 528  Q
    |||||||||||||||  |||||| ||| ||||||||||||||||||    
T  17315408 tctactatgatcatgagtgagtaaactattctagtcttgagattgt 17315363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 483 - 528
Target Start/End: Complemental strand, 17337319 - 17337274
Alignment:
Q  483 tctactatgatcatgtatgagtagacttttctagtcttgagattgt 528  Q
    |||||||||||||||  |||||| ||| ||||||||||||||||||    
T  17337319 tctactatgatcatgagtgagtaaactattctagtcttgagattgt 17337274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 57 - 93
Target Start/End: Original strand, 19386635 - 19386671
Alignment:
Q  57 ggtgtaggaataaagggtgttcatgtaacattttcct 93  Q
    |||||| || |||||||||||||||||||||||||||    
T  19386635 ggtgtatgattaaagggtgttcatgtaacattttcct 19386671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 40 - 92
Target Start/End: Original strand, 37038609 - 37038661
Alignment:
Q  40 catggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 92  Q
    |||||||||||||| |  || ||| ||||||||||||| ||||||||||||||    
T  37038609 catggggtgtacaagggtgtatagaaataaagggtgtttatgtaacattttcc 37038661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 78; Significance: 5e-36; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 9 - 94
Target Start/End: Complemental strand, 35069804 - 35069719
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttccta 94  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  35069804 gtgagatgaacttaccaaaatatccctaatacatgaggtgtacaatgaggtgtaggaataaagagtgttcatgtaacattttccta 35069719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 9 - 92
Target Start/End: Original strand, 24001029 - 24001112
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 92  Q
    |||||||||||||||||||||||||||||||||| |||||||||||| | ||||||||||||||||||||||||||||||||||    
T  24001029 gtgagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacattttcc 24001112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 9 - 92
Target Start/End: Original strand, 42538448 - 42538531
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 92  Q
    |||||||||||||||||||||||||||||||||| |||||||||||| | ||||||||||||||||||||||||||||||||||    
T  42538448 gtgagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacattttcc 42538531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 9 - 93
Target Start/End: Complemental strand, 5015478 - 5015394
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcct 93  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||  |||||| ||||||| |||||||||||||||||||||    
T  5015478 gtgagatgaacttaccaaaatatccctaatacatgaggtgtacaatggagtgtagaaataaagagtgttcatgtaacattttcct 5015394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 9 - 92
Target Start/End: Original strand, 5810941 - 5811024
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 92  Q
    |||||||||||||| |||||||||||||||| || |||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  5810941 gtgagatgaacttatcaaaatatccctaatatatagggtgtacaatggggtgtaggaataaagggtggtcatgtaacattttcc 5811024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 9 - 92
Target Start/End: Complemental strand, 42972935 - 42972852
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 92  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||  ||||||||||||||| |||||| ||||||||||||    
T  42972935 gtgagatgaacttaccaaaatatccctaatacatgaggtgtacaatggagtgtaggaataaaggatgttcaggtaacattttcc 42972852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 9 - 96
Target Start/End: Complemental strand, 44326261 - 44326174
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcctatt 96  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||| | |||| |||||||||||||| |||||||||||| |||||    
T  44326261 gtgagatgaacttaccaaaatatccctaatatatgaggtgtacaatgggatgtatgaataaagggtgtttatgtaacatttttctatt 44326174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 9 - 94
Target Start/End: Original strand, 5194248 - 5194333
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttccta 94  Q
    |||||||||| ||| |||||||||| ||| |||| ||||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  5194248 gtgagatgaatttatcaaaatatccttaaaacatagggtgtacaatgaggtgtatgaataaatggtgttcatgtaacattttccta 5194333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 9 - 90
Target Start/End: Original strand, 43343641 - 43343722
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacatttt 90  Q
    |||||||||||||| |||||||||||||||||||||||||||||||  ||||||| |||||| | |||||||||||||||||    
T  43343641 gtgagatgaacttatcaaaatatccctaatacatggggtgtacaatagggtgtagaaataaatgatgttcatgtaacatttt 43343722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 9 - 90
Target Start/End: Original strand, 44416951 - 44417032
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacatttt 90  Q
    |||||||||||||| |||||||||||||||||||||||||||||||  ||||||| |||||| | |||||||||||||||||    
T  44416951 gtgagatgaacttatcaaaatatccctaatacatggggtgtacaatagggtgtagaaataaatgatgttcatgtaacatttt 44417032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 9 - 96
Target Start/End: Complemental strand, 43317526 - 43317439
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcctatt 96  Q
    |||||||||| ||| ||||||||||||||  ||| || |||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  43317526 gtgagatgaatttatcaaaatatccctaaagcataggatgtacaatgaggtgtatgaataaatggtgttcatgtaacattttcctatt 43317439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 9 - 92
Target Start/End: Complemental strand, 45326103 - 45326020
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 92  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||| | |||| ||||||| |||||| |||||||| |||||    
T  45326103 gtgagatgaacttaccaaaatatccctaatatatggggtgtacaatgtgatgtatgaataaaaggtgtttatgtaacactttcc 45326020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 9 - 95
Target Start/End: Complemental strand, 9216384 - 9216299
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcctat 95  Q
    |||||||||||||||||||||||| ||||| |||||| ||||||||  | | |||||||||||||||||||||||||||||||||||    
T  9216384 gtgagatgaacttaccaaaatatctctaatgcatggg-tgtacaataggatataggaataaagggtgttcatgtaacattttcctat 9216299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 9 - 90
Target Start/End: Original strand, 4638216 - 4638297
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacatttt 90  Q
    ||||||||||||||||||||||||| ||||| ||||||||||||||   ||||| ||||||| |||||||||||||||||||    
T  4638216 gtgagatgaacttaccaaaatatccataatatatggggtgtacaattgagtgtatgaataaaaggtgttcatgtaacatttt 4638297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 9 - 90
Target Start/End: Complemental strand, 10573832 - 10573751
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacatttt 90  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||  | |||| |||||||||||||| ||||||||||||    
T  10573832 gtgagatgaatttaccaaaatattcctaatacatggggtgtacaataggatgtatgaataaagggtgtttatgtaacatttt 10573751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 12 - 89
Target Start/End: Original strand, 26898422 - 26898499
Alignment:
Q  12 agatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattt 89  Q
    |||||||||||||||||||||||||||||||||  ||||||||  |||||| ||||||| ||||||||||||||||||    
T  26898422 agatgaacttaccaaaatatccctaatacatggaatgtacaattgggtgtatgaataaaaggtgttcatgtaacattt 26898499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 9 - 93
Target Start/End: Complemental strand, 40237002 - 40236918
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcct 93  Q
    |||||||||| |||||||||| |||||||| |||||||||||||||  | |||| || |||||||||||||||||||||||||||    
T  40237002 gtgagatgaaattaccaaaatgtccctaatgcatggggtgtacaataggatgtatgattaaagggtgttcatgtaacattttcct 40236918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 12 - 83
Target Start/End: Original strand, 32029837 - 32029908
Alignment:
Q  12 agatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgta 83  Q
    ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||  ||||| |||||    
T  32029837 agatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaataaaaagtgtttatgta 32029908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 9 - 92
Target Start/End: Complemental strand, 31513370 - 31513287
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 92  Q
    |||||||||| |||||||||||||| |||| |||||||| ||||||  |||||| || ||||| ||||||||||||||||||||    
T  31513370 gtgagatgaatttaccaaaatatccttaatgcatggggtatacaatagggtgtatgattaaagagtgttcatgtaacattttcc 31513287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 9 - 93
Target Start/End: Complemental strand, 41861759 - 41861673
Alignment:
Q  9 gtgagatgaacttaccaaaatatcccta--atacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcct 93  Q
    ||||||| |||||||||||||||| |||  |||||| ||||||| |||  |||||| ||||||||||||||||||||||||||||||    
T  41861759 gtgagataaacttaccaaaatatctctataatacatagggtgtataattgggtgtatgaataaagggtgttcatgtaacattttcct 41861673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 9 - 95
Target Start/End: Original strand, 16180374 - 16180459
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcctat 95  Q
    |||||||||| ||||||||||||   |||||| |||||||||||||| |||||||||||||| |||||| |||||||||||| ||||    
T  16180374 gtgagatgaatttaccaaaatatttataatacgtggggtgtacaatg-ggtgtaggaataaatggtgttgatgtaacatttttctat 16180459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 431 - 583
Target Start/End: Original strand, 10234630 - 10234784
Alignment:
Q  431 gtcatttacttttatatcatttacttttatgtcttcatcttctactccctcatctact--atgatcatgtatgagtagacttttctagtcttgagattgt 528  Q
    ||||||||||||||| ||||||||||| |||  || || ||||| |||||  ||||||  || ||||||||||||||||| ||| |||||||| ||||||    
T  10234630 gtcatttacttttatgtcatttactttcatgcatttattttctaatcccttgtctactctataatcatgtatgagtagacctttttagtcttgtgattgt 10234729  T
Q  529 gggaattatctaatgatggacccttaaacaatctcaagtctagactctattttat 583  Q
     | ||| |||||||||| ||  | |||  || | |||||||| ||||||||||||    
T  10234730 tgaaataatctaatgattgaatcctaatgaaacccaagtctaaactctattttat 10234784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 9 - 76
Target Start/End: Original strand, 27393277 - 27393344
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgt 76  Q
    ||||||||||||||| |||||||||||||||||| | |||||||||  | ||||||||||||||||||    
T  27393277 gtgagatgaacttacaaaaatatccctaatacatagagtgtacaataggatgtaggaataaagggtgt 27393344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 9 - 95
Target Start/End: Original strand, 24280613 - 24280699
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcctat 95  Q
    |||||||||| ||||||||||||  ||| | |||||| |||| |||  |||||| |||||||||||||||| |||||||||||||||    
T  24280613 gtgagatgaatttaccaaaatatttctagtgcatgggatgtagaatagggtgtatgaataaagggtgttcacgtaacattttcctat 24280699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 9 - 91
Target Start/End: Original strand, 31408650 - 31408732
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttc 91  Q
    |||| ||||| |||||||||||||| |||| |||||| ||||||||   ||||| || |||||||||||||||||||||||||    
T  31408650 gtgaaatgaatttaccaaaatatccttaatgcatgggatgtacaatagagtgtatgattaaagggtgttcatgtaacattttc 31408732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 9 - 93
Target Start/End: Original strand, 27535248 - 27535332
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcct 93  Q
    |||||||||| |||||||||| ||  ||| |||||| |||||||||   ||||| || |||||||||||||||||||||||||||    
T  27535248 gtgagatgaaattaccaaaatgtctttaacacatggagtgtacaatagagtgtatgattaaagggtgttcatgtaacattttcct 27535332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 9 - 97
Target Start/End: Original strand, 38160596 - 38160699
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatg-------------agg--tgtaggaataaagggtgttcatgtaacattttcct 93  Q
    |||||||||| |||| |||||||||||||||||||||||||||||||             |||  |||||||||||||||||||||||||||||||||||    
T  38160596 gtgagatgaagttactaaaatatccctaatacatggggtgtacaatggagtgtaagaataagggatgtaggaataaagggtgttcatgtaacattttcct 38160695  T
Q  94 atta 97  Q
    ||||    
T  38160696 atta 38160699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 92
Target Start/End: Complemental strand, 39998475 - 39998408
Alignment:
Q  25 aaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 92  Q
    ||||||||||||||||||||||||||||||  | |||| || ||||  ||||||||||||||||||||    
T  39998475 aaaatatccctaatacatggggtgtacaataggatgtatgattaaaatgtgttcatgtaacattttcc 39998408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 9 - 93
Target Start/End: Complemental strand, 33384954 - 33384869
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaat-gaggtgtaggaataaagggtgttcatgtaacattttcct 93  Q
    |||||||||| |||||||||| |||||||| ||||| || |||||| | |||||| || |||| | ||||||||||||||||||||    
T  33384954 gtgagatgaatttaccaaaatgtccctaatgcatggagtatacaataggggtgtatgattaaatgatgttcatgtaacattttcct 33384869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 94
Target Start/End: Original strand, 47279744 - 47279799
Alignment:
Q  39 acatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttccta 94  Q
    ||||||||||||||||| | |||| ||||||||||| || |||||| |||||||||    
T  47279744 acatggggtgtacaatgggatgtatgaataaagggtatttatgtaatattttccta 47279799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 74; Significance: 1e-33; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 9 - 94
Target Start/End: Complemental strand, 30838715 - 30838630
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttccta 94  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || ||||| ||||||||||||||||||||||||||||||    
T  30838715 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaataagatgtagaaataaagggtgttcatgtaacattttccta 30838630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 9 - 92
Target Start/End: Complemental strand, 1750497 - 1750414
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 92  Q
    ||||||||||||||| |||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||    
T  1750497 gtgagatgaacttacaaaaatatccctaatacatagggtgtacaatggggtgtaggaataaagggtgttcatgtaacattttcc 1750414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 9 - 93
Target Start/End: Original strand, 12302270 - 12302354
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcct 93  Q
    ||||||||||||||| |||||||||||||||||| |||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  12302270 gtgagatgaacttacaaaaatatccctaatacatagggtgtacaatggggtgtagaaataaagggtgttcatgtaacattttcct 12302354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 9 - 93
Target Start/End: Original strand, 43335780 - 43335864
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcct 93  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | ||||||| ||||||||||||    
T  43335780 gtgagatgaacttaccaaaatatccctaatacatgggatgtacaatgaggtgtaggaataaatgatgttcatataacattttcct 43335864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 9 - 92
Target Start/End: Complemental strand, 16096830 - 16096747
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 92  Q
    ||||||| |||| ||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||    
T  16096830 gtgagattaactcaccaaaatatccctaatacatggggtgtataatggggtgtaggaataaagggtgttcatgtaacattttcc 16096747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 9 - 91
Target Start/End: Complemental strand, 19047240 - 19047158
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttc 91  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||   |||||||||||||||||||||||||||||||||    
T  19047240 gtgagatgaacttaccaaaatatccctaatacatagggtgtacaatggaatgtaggaataaagggtgttcatgtaacattttc 19047158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 13 - 90
Target Start/End: Complemental strand, 33229381 - 33229303
Alignment:
Q  13 gatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaat-aaagggtgttcatgtaacatttt 90  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||    
T  33229381 gatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaaagggtgttcatgtatcatttt 33229303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 10 - 96
Target Start/End: Original strand, 43490419 - 43490505
Alignment:
Q  10 tgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcctatt 96  Q
    ||||||||||||||||||||||||||||||||| | |||||||||| | |||||||||||||||||||||||||||||||| |||||    
T  43490419 tgagatgaacttaccaaaatatccctaatacatagagtgtacaatgggatgtaggaataaagggtgttcatgtaacatttttctatt 43490505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 9 - 93
Target Start/End: Complemental strand, 43114640 - 43114556
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcct 93  Q
    |||||||||| |||||||||| |||||||| |||||||||||||||  |||||| || |||||||||||||||||||||||||||    
T  43114640 gtgagatgaaattaccaaaatgtccctaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatgtaacattttcct 43114556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 9 - 92
Target Start/End: Original strand, 12415477 - 12415560
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 92  Q
    ||||||| || |||||||||| |||||||| ||||||||||||||| ||||||| || ||||||||||||||||||||||||||    
T  12415477 gtgagataaaattaccaaaatgtccctaatgcatggggtgtacaataaggtgtatgattaaagggtgttcatgtaacattttcc 12415560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 9 - 92
Target Start/End: Original strand, 12427537 - 12427620
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 92  Q
    ||||||| || |||||||||| |||||||| ||||||||||||||| ||||||| || ||||||||||||||||||||||||||    
T  12427537 gtgagataaaattaccaaaatgtccctaatgcatggggtgtacaataaggtgtatgattaaagggtgttcatgtaacattttcc 12427620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 9 - 90
Target Start/End: Original strand, 11825671 - 11825752
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacatttt 90  Q
    |||||||||| |||||||||| |||||||| |||||||||||||||  |||||| || ||||||||||||||||||||||||    
T  11825671 gtgagatgaaattaccaaaatgtccctaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatgtaacatttt 11825752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 9 - 93
Target Start/End: Original strand, 4764743 - 4764827
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcct 93  Q
    |||||||||| ||||||||||||   ||||||||||||||||||||  |||||||||||||| |||||| |||||||||||||||    
T  4764743 gtgagatgaatttaccaaaatatttataatacatggggtgtacaatagggtgtaggaataaatggtgttgatgtaacattttcct 4764827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 9 - 91
Target Start/End: Original strand, 34817793 - 34817875
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttc 91  Q
    |||||||||| |||||||||| | | || | ||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  34817793 gtgagatgaatttaccaaaatgtgcgtagtgcatggggtgtacaatgaggtgtgtgaataaagggtgttcatgtaacattttc 34817875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 9 - 90
Target Start/End: Original strand, 41281991 - 41282072
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacatttt 90  Q
    |||||||||| ||| |||||| |||||||| |||||||||||||||  |||||| || ||||||||||||||||||||||||    
T  41281991 gtgagatgaaattatcaaaatgtccctaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatgtaacatttt 41282072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 9 - 93
Target Start/End: Complemental strand, 16804051 - 16803967
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcct 93  Q
    |||||||||| ||| |||||| |||||||| |||||| ||||||||  |||||| || |||||||||||||||||||||||||||    
T  16804051 gtgagatgaaattatcaaaatgtccctaatgcatgggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttcct 16803967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 9 - 93
Target Start/End: Complemental strand, 16843333 - 16843249
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcct 93  Q
    |||||||||| ||| |||||| |||||||| |||||| ||||||||  |||||| || |||||||||||||||||||||||||||    
T  16843333 gtgagatgaaattatcaaaatgtccctaatgcatgggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttcct 16843249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 9 - 92
Target Start/End: Original strand, 13780752 - 13780835
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 92  Q
    |||||||||| ||| |||||||||||||||  |||||||||||||||||||||  |||||||  ||||| ||||||||||||||    
T  13780752 gtgagatgaatttatcaaaatatccctaatgtatggggtgtacaatgaggtgtgtgaataaaatgtgttgatgtaacattttcc 13780835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 9 - 95
Target Start/End: Complemental strand, 18491788 - 18491702
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcctat 95  Q
    |||||||||| |||||||||| | | |||| |||| ||||||||||  |||||| || |||||||||||||||||||||||||||||    
T  18491788 gtgagatgaatttaccaaaatgttcttaatgcatgaggtgtacaatagggtgtatgattaaagggtgttcatgtaacattttcctat 18491702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 9 - 93
Target Start/End: Original strand, 966851 - 966935
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcct 93  Q
    |||||||||| |||||||||  | | |||| |||||||||||||||  |||||| || |||||||||||||||||||||||||||    
T  966851 gtgagatgaatttaccaaaacgttcttaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatgtaacattttcct 966935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 90
Target Start/End: Original strand, 6518486 - 6518566
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacatttt 90  Q
    |||||||||| |||||||||| |||||||| |||||||||||||||   ||||| || |||| |||||||||||||||||||    
T  6518486 gtgagatgaaattaccaaaatgtccctaatgcatggggtgtacaatagagtgtatgattaaa-ggtgttcatgtaacatttt 6518566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 9 - 97
Target Start/End: Original strand, 8896600 - 8896688
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcctatta 97  Q
    |||||||||| |||||||||||| |||| |  || ||||||||||||   |||  ||||||||||||||||||||||||||| ||||||    
T  8896600 gtgagatgaatttaccaaaatattcctattgtatagggtgtacaatggaatgtgtgaataaagggtgttcatgtaacatttttctatta 8896688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 9 - 93
Target Start/End: Original strand, 34895758 - 34895842
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcct 93  Q
    |||||||||| ||||||| || |||||||| |||||||||||||||  |||||  || |||| ||||||||||||||| ||||||    
T  34895758 gtgagatgaatttaccaatatgtccctaatgcatggggtgtacaatagggtgtgtgattaaatggtgttcatgtaacactttcct 34895842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 483 - 545
Target Start/End: Complemental strand, 24185387 - 24185325
Alignment:
Q  483 tctactatgatcatgtatgagtagacttttctagtcttgagattgtgggaattatctaatgat 545  Q
    ||||||||||||||   ||||||||||||||||||||||||||||  ||||| ||||||||||    
T  24185387 tctactatgatcataagtgagtagacttttctagtcttgagattgatggaataatctaatgat 24185325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 96
Target Start/End: Complemental strand, 42026852 - 42026763
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaa--gggtgttcatgtaacattttcctatt 96  Q
    |||||||||| || |||||||||||||||| |  ||| |||||||||   |||| |||||||  ||||||||||||||||||||||||||    
T  42026852 gtgagatgaatttgccaaaatatccctaatgcgcgggatgtacaatggaatgtatgaataaattgggtgttcatgtaacattttcctatt 42026763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 92
Target Start/End: Original strand, 42849875 - 42849946
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 92  Q
    |||||||||||||| |||||||||||||||||||||            ||||||||||||||||||||||||||||||||||||    
T  42849875 gtgagatgaacttatcaaaatatccctaatacatgg------------ggtgtaggaataaagggtgttcatgtaacattttcc 42849946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 9 - 90
Target Start/End: Original strand, 4299437 - 4299518
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacatttt 90  Q
    |||||||||| |||||||||| ||  |||| ||||| |||||||||  |||||| || |||||||||||||| |||||||||    
T  4299437 gtgagatgaatttaccaaaatgtcattaatgcatggagtgtacaatagggtgtatgattaaagggtgttcatataacatttt 4299518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 94
Target Start/End: Complemental strand, 14285758 - 14285674
Alignment:
Q  10 tgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttccta 94  Q
    ||||||||| |||||||||||||  ||||| || |||||||||||  |||||| || |||||||||||  ||||| |||||||||    
T  14285758 tgagatgaatttaccaaaatatctttaatatatagggtgtacaatagggtgtatgattaaagggtgtttgtgtaatattttccta 14285674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 90
Target Start/End: Complemental strand, 7070496 - 7070418
Alignment:
Q  12 agatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacatttt 90  Q
    ||||||| ||| |||||| |||| |||| |||| |  ||||||| | |||| |||||||||||||||||||||||||||    
T  7070496 agatgaatttatcaaaatgtccccaataaatggaggttacaatgggatgtatgaataaagggtgttcatgtaacatttt 7070418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 434 - 548
Target Start/End: Complemental strand, 31603621 - 31603507
Alignment:
Q  434 atttacttttatatcatttacttttatgtcttcatcttctactccctcatctactatgatcatgtatgagtagacttttctagtcttgagattgtgggaa 533  Q
    |||||||||||| |||||||  ||| |||||||||||| ||     |  |||||||||||||| | |||||||| |||||||||||||  |||||   ||    
T  31603621 atttacttttatgtcatttatctttgtgtcttcatcttttaagtttttgtctactatgatcatatgtgagtagatttttctagtcttggaattgttaaaa 31603522  T
Q  534 ttatctaatgatgga 548  Q
    | |||||||||||||    
T  31603521 taatctaatgatgga 31603507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 407 - 445
Target Start/End: Complemental strand, 41700335 - 41700297
Alignment:
Q  407 tctttatcgctttgttttcattctgtcatttacttttat 445  Q
    |||||||||||||||||||||||  ||||||||||||||    
T  41700335 tctttatcgctttgttttcattccttcatttacttttat 41700297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 54
Target Start/End: Original strand, 4451967 - 4452012
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaat 54  Q
    |||||||||| ||||||||||||||||||| |||  ||||||||||    
T  4451967 gtgagatgaatttaccaaaatatccctaatgcatatggtgtacaat 4452012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 54
Target Start/End: Original strand, 39149313 - 39149354
Alignment:
Q  13 gatgaacttaccaaaatatccctaatacatggggtgtacaat 54  Q
    |||||||||||||||||||| ||||||||| || ||||||||    
T  39149313 gatgaacttaccaaaatatctctaatacataggatgtacaat 39149354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 73; Significance: 5e-33; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 9 - 93
Target Start/End: Original strand, 1771283 - 1771367
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcct 93  Q
    |||||||||||||| ||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  1771283 gtgagatgaacttatcaaaatatctctaatacatggggtgtacaatggggtgtaggaataaagggtgttcatgtaacattttcct 1771367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 9 - 93
Target Start/End: Complemental strand, 33703224 - 33703140
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcct 93  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || ||||| |||||||||||||||||||||||||||||    
T  33703224 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaataagatgtagaaataaagggtgttcatgtaacattttcct 33703140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 9 - 93
Target Start/End: Complemental strand, 25051776 - 25051692
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcct 93  Q
    |||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||| |||||||||| ||||||||||    
T  25051776 gtgagatgaacttaccaaaatatccctaatacatagggtgtacaatggggtgtaggaataaagtgtgttcatgtgacattttcct 25051692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 9 - 92
Target Start/End: Complemental strand, 35017815 - 35017733
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 92  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||| | ||||||||||||||||||||||||||||||||    
T  35017815 gtgagatgaacttaccaaaatatcccta-tacatggggtgtacaatgagatataggaataaagggtgttcatgtaacattttcc 35017733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 10 - 92
Target Start/End: Original strand, 27316731 - 27316813
Alignment:
Q  10 tgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 92  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| | |||||||||||    
T  27316731 tgagatgaacttaccaaaatatccttaatacatggggtgtataatgaggtgtaggaataaagggtgttcgtttaacattttcc 27316813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 9 - 90
Target Start/End: Original strand, 43949818 - 43949900
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaat-aaagggtgttcatgtaacatttt 90  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| ||||||    
T  43949818 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgcaggaataaaagggtgttcatgtatcatttt 43949900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 12 - 92
Target Start/End: Complemental strand, 27550389 - 27550309
Alignment:
Q  12 agatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 92  Q
    |||||||||||||||||||||||||||||||| |||||||||||  |||||| ||||||||||||||||||||||||||||    
T  27550389 agatgaacttaccaaaatatccctaatacatgaggtgtacaatggagtgtagaaataaagggtgttcatgtaacattttcc 27550309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 9 - 93
Target Start/End: Complemental strand, 27864647 - 27864563
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcct 93  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| | |||| ||||||| |||||| |||||||||||||||    
T  27864647 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgggatgtatgaataaatggtgtttatgtaacattttcct 27864563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 9 - 93
Target Start/End: Original strand, 28982839 - 28982923
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcct 93  Q
    ||||||||||||||||||||||||||||||| ||||| ||||||||  ||||||| |||||||||||||||||||||||||||||    
T  28982839 gtgagatgaacttaccaaaatatccctaatatatgggatgtacaatagggtgtagaaataaagggtgttcatgtaacattttcct 28982923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 9 - 93
Target Start/End: Original strand, 55966363 - 55966447
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcct 93  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||| | |||| |||||||||||||| |||||||||||||||    
T  55966363 gtgagatgaacttaccaaaatatccctaatacatgggatgtacaatgggatgtatgaataaagggtgtttatgtaacattttcct 55966447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 9 - 90
Target Start/End: Complemental strand, 39631184 - 39631102
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaat-aaagggtgttcatgtaacatttt 90  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| ||||||||| ||||||    
T  39631184 gtgagatgaacttaccaaaatatccctaatacatgaggtgtacaatgaggtgtaggaataaaagggggttcatgtatcatttt 39631102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 9 - 90
Target Start/End: Original strand, 43514703 - 43514784
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacatttt 90  Q
    |||||||||||||||||||||| ||||||||||||  ||||||||||  |||||||||||||||||||||||||||||||||    
T  43514703 gtgagatgaacttaccaaaataaccctaatacatgaagtgtacaatggagtgtaggaataaagggtgttcatgtaacatttt 43514784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 9 - 94
Target Start/End: Original strand, 48463467 - 48463552
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttccta 94  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||  |||| ||||||| |||||| ||||||||||||||||    
T  48463467 gtgagatgaacttaccaaaatatccctaatacatgggatgtacaatgaaatgtatgaataaatggtgtttatgtaacattttccta 48463552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 12 - 92
Target Start/End: Complemental strand, 12497036 - 12496956
Alignment:
Q  12 agatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 92  Q
    ||||||||||||||||||||| |||||||||||| |||||||||  ||||||||||||||||||||||| |||||||||||    
T  12497036 agatgaacttaccaaaatatctctaatacatgggatgtacaatggagtgtaggaataaagggtgttcatataacattttcc 12496956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 10 - 93
Target Start/End: Complemental strand, 28988555 - 28988472
Alignment:
Q  10 tgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcct 93  Q
    ||||||||| ||| |||||| |||||| | ||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  28988555 tgagatgaatttatcaaaatgtccctagtgcatggggtgtacaatgaggtgtatgaataaagggtgttcatgtaacattttcct 28988472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 9 - 91
Target Start/End: Complemental strand, 41878489 - 41878407
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttc 91  Q
    |||||||||||||| |||||||||||||||  || ||||||||||||||||||| |||||||| |||||||||||||||||||    
T  41878489 gtgagatgaacttatcaaaatatccctaatggatagggtgtacaatgaggtgtatgaataaagagtgttcatgtaacattttc 41878407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 9 - 90
Target Start/End: Original strand, 27893859 - 27893940
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacatttt 90  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| | |||| ||||||| |||||| ||||||||||||    
T  27893859 gtgagatgaaattaccaaaatatccctaatacatggggtgtacaatgggatgtatgaataaatggtgtttatgtaacatttt 27893940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 9 - 93
Target Start/End: Complemental strand, 23036063 - 23035979
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcct 93  Q
    ||||||||||||||| ||||||||||||||| || |||||||||||  ||||||||||||||||  |||||||||||||||||||    
T  23036063 gtgagatgaacttacaaaaatatccctaatatatagggtgtacaatagggtgtaggaataaaggaggttcatgtaacattttcct 23035979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 9 - 93
Target Start/End: Complemental strand, 712043 - 711959
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcct 93  Q
    |||||||||| |||||||||||||| |||| ||| |||||||||||  |||||| || |||||||||||||||||||||||||||    
T  712043 gtgagatgaatttaccaaaatatccttaatgcatagggtgtacaatagggtgtatgattaaagggtgttcatgtaacattttcct 711959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 9 - 89
Target Start/End: Original strand, 23204795 - 23204875
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattt 89  Q
    |||| |||||||||| |||||||||||||||||| || ||||||||| | ||||||||||||| |||||||||||||||||    
T  23204795 gtgacatgaacttacaaaaatatccctaatacataggatgtacaatgggatgtaggaataaagagtgttcatgtaacattt 23204875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 9 - 92
Target Start/End: Original strand, 17619169 - 17619252
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 92  Q
    |||||||||| |||||||||||||| |||| |||||||||||||||  |||||| || |||| |||||||||||||||||||||    
T  17619169 gtgagatgaatttaccaaaatatccttaatgcatggggtgtacaatagggtgtatgattaaaaggtgttcatgtaacattttcc 17619252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 9 - 90
Target Start/End: Complemental strand, 43735825 - 43735744
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacatttt 90  Q
    |||||||||||||| ||||||||| |||||||||||  |||| |||||| |||||||||||||| ||||||||||| |||||    
T  43735825 gtgagatgaacttatcaaaatatctctaatacatggaatgtataatgagatgtaggaataaaggatgttcatgtaatatttt 43735744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 9 - 92
Target Start/End: Original strand, 55272393 - 55272476
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 92  Q
    |||||||||| |||||||||||||| |||| |||||||||||||||   ||||| || |||||| |||||||||||||||||||    
T  55272393 gtgagatgaatttaccaaaatatccttaatgcatggggtgtacaatagagtgtatgattaaaggatgttcatgtaacattttcc 55272476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 9 - 90
Target Start/End: Original strand, 3756263 - 3756344
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacatttt 90  Q
    ||||||| || |||| ||||||||| |||| |||||||||||||||  |||||| || ||||||||||||||||||||||||    
T  3756263 gtgagataaatttactaaaatatccttaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatgtaacatttt 3756344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 9 - 90
Target Start/End: Complemental strand, 31680985 - 31680904
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacatttt 90  Q
    ||||||||||||||||||||||||||||||| | |||||||||||||   |||| ||||||| |||||| | ||||||||||    
T  31680985 gtgagatgaacttaccaaaatatccctaatatacggggtgtacaatggaatgtatgaataaatggtgtttacgtaacatttt 31680904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 9 - 94
Target Start/End: Complemental strand, 32728440 - 32728355
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttccta 94  Q
    |||||||||| |||| ||||| ||| |||| |||||||||||||||  |||||| || |||||| |||||||||||||||||||||    
T  32728440 gtgagatgaatttactaaaatgtccttaatgcatggggtgtacaatagggtgtatgattaaaggatgttcatgtaacattttccta 32728355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 9 - 95
Target Start/End: Original strand, 48435596 - 48435682
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcctat 95  Q
    |||||||||| ||||||| || |||||||| |||||||||||||||  |||||  || |||| ||||||||||||||| ||||||||    
T  48435596 gtgagatgaatttaccaatatgtccctaatgcatggggtgtacaatagggtgtgtgattaaatggtgttcatgtaacactttcctat 48435682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 93
Target Start/End: Original strand, 960890 - 960971
Alignment:
Q  12 agatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcct 93  Q
    ||||||| |||||||||| ||||||||  || |||||||||||   ||||| || |||||||||||||||||||||||||||    
T  960890 agatgaatttaccaaaatgtccctaatgtatagggtgtacaatagagtgtatgattaaagggtgttcatgtaacattttcct 960971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 90
Target Start/End: Complemental strand, 35037088 - 35037007
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacatttt 90  Q
    |||||||||| |||||||||||||| |||| |||||||||||||||   ||||| |  ||||||||| ||||||||||||||    
T  35037088 gtgagatgaatttaccaaaatatccttaatgcatggggtgtacaatagagtgtatggttaaagggtgctcatgtaacatttt 35037007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 10 - 94
Target Start/End: Complemental strand, 21687088 - 21687004
Alignment:
Q  10 tgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttccta 94  Q
    |||||||||||||| |||||||  |||||||||  | |||| |||| ||||||  |||||||| |||||||||||||||||||||    
T  21687088 tgagatgaacttactaaaatatttctaatacataagatgtataatggggtgtaaaaataaaggatgttcatgtaacattttccta 21687004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 13 - 92
Target Start/End: Complemental strand, 41848050 - 41847971
Alignment:
Q  13 gatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 92  Q
    |||||| || ||||||| || ||||| ||||||||||||||||||||||  ||| ||||| ||||| |||||||||||||    
T  41848050 gatgaatttgccaaaatgtctctaatgcatggggtgtacaatgaggtgtgtgaaaaaaggatgttcttgtaacattttcc 41847971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 9 - 92
Target Start/End: Original strand, 45490330 - 45490413
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 92  Q
    |||||||||| |||| ||| ||||||||||||||| ||||||||||  | ||||  ||||||  ||||||||||||||||||||    
T  45490330 gtgagatgaatttactaaagtatccctaatacatgaggtgtacaattggatgtataaataaaatgtgttcatgtaacattttcc 45490413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 94
Target Start/End: Original strand, 49229684 - 49229766
Alignment:
Q  12 agatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttccta 94  Q
    ||||||| |||||| ||||||| |||| ||||  |||||||||  |||||| || |||||| ||||||| |||||||||||||    
T  49229684 agatgaatttaccagaatatccttaatgcatgaagtgtacaatagggtgtatgattaaaggatgttcatataacattttccta 49229766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 50
Target Start/End: Original strand, 51512285 - 51512323
Alignment:
Q  12 agatgaacttaccaaaatatccctaatacatggggtgta 50  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  51512285 agatgaacttaccaaaatatctctaatacatggggtgta 51512323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 90
Target Start/End: Original strand, 41327560 - 41327641
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacatttt 90  Q
    |||||||||| |||||||||| ||| || | |||  ||||||||||| |||||  |||||||||||||  ||||||||||||    
T  41327560 gtgagatgaatttaccaaaatgtccgtagtgcataaggtgtacaatggggtgtgtgaataaagggtgtctatgtaacatttt 41327641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 9 - 93
Target Start/End: Original strand, 46827723 - 46827807
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcct 93  Q
    ||||||| || |||||||||  | | |||| ||| |||||||||||   ||||| || |||||||||||||||||||||||||||    
T  46827723 gtgagataaatttaccaaaacgttcttaatgcattgggtgtacaatagagtgtatgattaaagggtgttcatgtaacattttcct 46827807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 96
Target Start/End: Complemental strand, 30189324 - 30189269
Alignment:
Q  41 atggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcctatt 96  Q
    ||||||||||| |||  ||||  ||||||| |||||||||||||||||||||||||    
T  30189324 atggggtgtacgatggagtgtgtgaataaatggtgttcatgtaacattttcctatt 30189269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 486 - 581
Target Start/End: Complemental strand, 31371790 - 31371696
Alignment:
Q  486 actatgatcatgtatgagtagacttttctagtcttgagattgtgggaattatctaatgatggacccttaaacaatctcaagtctagactctatttt 581  Q
    ||||||||||||| |||||||||| | |||||||||||| ||| | ||| |||||||||| || || ||| |||   |||||||| ||||||||||    
T  31371790 actatgatcatgtgtgagtagactct-ctagtcttgagaatgttgaaataatctaatgattgaaccctaatcaacgccaagtctaaactctatttt 31371696  T

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Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 95
Target Start/End: Complemental strand, 50526141 - 50526086
Alignment:
Q  40 catggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcctat 95  Q
    |||||||||||||| |  || ||| ||||||||||||| |||||||||||||||||    
T  50526141 catggggtgtacaagggtgtatagaaataaagggtgtttatgtaacattttcctat 50526086  T

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Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 54
Target Start/End: Complemental strand, 19880037 - 19879992
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaat 54  Q
    |||||||||| |||||||||| ||| ||||| ||||||||||||||    
T  19880037 gtgagatgaatttaccaaaatgtccataatatatggggtgtacaat 19879992  T

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Target: chr5 (Bit Score: 72; Significance: 2e-32; HSPs: 15)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 9 - 92
Target Start/End: Original strand, 2614666 - 2614749
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 92  Q
    |||||||||||||||||||||||||||||||||| |||||||||||| | ||||||||||||||||||||||||||||||||||    
T  2614666 gtgagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacattttcc 2614749  T

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Target: chr5; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 9 - 92
Target Start/End: Complemental strand, 22512388 - 22512305
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 92  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||||||||||||||||||||||||||||    
T  22512388 gtgagatgaacttaccaaaatatccctaatacatggagtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 22512305  T

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Target: chr5; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 9 - 92
Target Start/End: Original strand, 41334680 - 41334763
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 92  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  41334680 gtgagatgaacttaccaaaatatccctaatacatagggtgtataatgaggtgtatgaataaagggtgttcatgtaacattttcc 41334763  T

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Target: chr5; HSP #4
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 9 - 93
Target Start/End: Complemental strand, 7617216 - 7617132
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcct 93  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||  ||||| ||||||||||||||||||||||||||||||    
T  7617216 gtgagatgaacttaccaaaatatccctaatacatggggtgtataatggagtgtatgaataaagggtgttcatgtaacattttcct 7617132  T

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Target: chr5; HSP #5
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 9 - 93
Target Start/End: Complemental strand, 18034065 - 18033981
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcct 93  Q
    ||||||||||||||| |||||||||||||||||| ||||||||||||  ||||||||||||||||||||||||||||||||||||    
T  18034065 gtgagatgaacttacaaaaatatccctaatacatagggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcct 18033981  T

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Target: chr5; HSP #6
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 9 - 93
Target Start/End: Complemental strand, 33801552 - 33801468
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcct 93  Q
    ||||||||||||||| |||||||||||||||||||| |||||||||| ||||||| |||||||| ||||||||||||||||||||    
T  33801552 gtgagatgaacttactaaaatatccctaatacatggagtgtacaatggggtgtagaaataaaggatgttcatgtaacattttcct 33801468  T

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Target: chr5; HSP #7
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 17 - 92
Target Start/End: Original strand, 33855068 - 33855143
Alignment:
Q  17 aacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 92  Q
    ||||||||||||| | ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  33855068 aacttaccaaaatgttcctaatacatggggtgtacaatggggtgtaggaataaagggtgttcatgtaacattttcc 33855143  T

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Target: chr5; HSP #8
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 9 - 92
Target Start/End: Original strand, 32473411 - 32473494
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 92  Q
    |||||||||| ||||||||||||||||||| |||| |||||||||| ||||||| || ||||||||||||||||||||||||||    
T  32473411 gtgagatgaaattaccaaaatatccctaatgcatgtggtgtacaataaggtgtatgattaaagggtgttcatgtaacattttcc 32473494  T

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Target: chr5; HSP #9
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 9 - 90
Target Start/End: Complemental strand, 5257078 - 5256997
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacatttt 90  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| | |||| ||||||| |||||| ||||||||||||    
T  5257078 gtgagatgaaattaccaaaatatccctaatacatggggtgtacaatgggatgtatgaataaatggtgtttatgtaacatttt 5256997  T

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Target: chr5; HSP #10
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 10 - 90
Target Start/End: Original strand, 25915006 - 25915085
Alignment:
Q  10 tgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacatttt 90  Q
    |||||||||| ||| ||||||| | |||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  25915006 tgagatgaacctacaaaaatattc-taatacattgggtgtacaatgaggtgtaggaataaagggtgttcatgtaacatttt 25915085  T

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Target: chr5; HSP #11
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 9 - 93
Target Start/End: Complemental strand, 38470662 - 38470578
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcct 93  Q
    |||| ||||| |||||||||||||| |||||||||||||||||||||   |||| |||||||||||||| |||||||||||||||    
T  38470662 gtgaaatgaatttaccaaaatatccttaatacatggggtgtacaatggaatgtatgaataaagggtgtttatgtaacattttcct 38470578  T

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Target: chr5; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 9 - 96
Target Start/End: Complemental strand, 17208157 - 17208070
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcctatt 96  Q
    |||||||||| |||||||||| ||| |||| ||||||||||||||| | ||||| || ||||||||||||| ||||||||||||||||    
T  17208157 gtgagatgaatttaccaaaatgtccttaatgcatggggtgtacaataaagtgtatgattaaagggtgttcacgtaacattttcctatt 17208070  T

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Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 434 - 602
Target Start/End: Complemental strand, 16766618 - 16766449
Alignment:
Q  434 atttacttttatatcatttacttttatgtcttcatcttctactccctcatctactatgatcatgtatgagtagacttttctagtcttgagattgtgggaa 533  Q
    |||| ||||| |||||||||| ||||||||||||| || || ||  |  |||||||||||||||| ||||||||| | | || |||||  ||||||||||    
T  16766618 atttgcttttctatcatttacctttatgtcttcatgttttaatcttttgtctactatgatcatgtgtgagtagacatatttaatcttggtattgtgggaa 16766519  T
Q  534 ttatctaatga-tggacccttaaacaatctcaagtctagactctattttattatagttcctattctaatc 602  Q
    | || |||||| | || || || ||| | ||||| ||||| |||||||||||| ||||| |||| |||||    
T  16766518 taatttaatgatttgatccctagacattgtcaagcctagattctattttattaaagttcttattttaatc 16766449  T

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Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 95
Target Start/End: Original strand, 39122450 - 39122535
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcctat 95  Q
    |||||||||| |||||||||||| |||||||||| ||||||  ||| || |||| ||||||| ||||||||||||| | ||||||||    
T  39122450 gtgagatgaatttaccaaaatattcctaatacat-gggtgtctaattagatgtatgaataaaaggtgttcatgtaatagtttcctat 39122535  T

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Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 93
Target Start/End: Original strand, 30622736 - 30622819
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcct 93  Q
    ||||||| || |||||||||||||| |||| |||||| | ||||||  |||||| || |||||| ||||||||||||||||||||    
T  30622736 gtgagataaatttaccaaaatatccttaatgcatgggct-tacaatagggtgtatgattaaaggatgttcatgtaacattttcct 30622819  T

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Target: scaffold0187 (Bit Score: 67; Significance: 2e-29; HSPs: 2)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 9 - 95
Target Start/End: Original strand, 14205 - 14291
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcctat 95  Q
    ||||||||||||||| |||||||||||||||||| || ||||||||| ||||||| |||||||||||||||||||||||||||||||    
T  14205 gtgagatgaacttacaaaaatatccctaatacataggatgtacaatggggtgtagaaataaagggtgttcatgtaacattttcctat 14291  T

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Target: scaffold0187; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 9 - 95
Target Start/End: Original strand, 24533 - 24619
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcctat 95  Q
    ||||||||||||||| |||||||||||||||||| || ||||||||| ||||||| |||||||||||||||||||||||||||||||    
T  24533 gtgagatgaacttacaaaaatatccctaatacataggatgtacaatggggtgtagaaataaagggtgttcatgtaacattttcctat 24619  T

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Target: scaffold0038 (Bit Score: 67; Significance: 2e-29; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 9 - 91
Target Start/End: Complemental strand, 112738 - 112656
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttc 91  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||   |||||||||||||||||||||||||||||||||    
T  112738 gtgagatgaacttaccaaaatatccctaatacatagggtgtacaatggaatgtaggaataaagggtgttcatgtaacattttc 112656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0385 (Bit Score: 65; Significance: 3e-28; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 9 - 93
Target Start/End: Complemental strand, 11334 - 11250
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcct 93  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||| |||||| |||||||| |||||||||| ||||||||||    
T  11334 gtgagatgaacttaccaaaatatccctaatatatggggtgtacaatggggtgtatgaataaagtgtgttcatgtgacattttcct 11250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 61; Significance: 8e-26; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 12 - 92
Target Start/End: Original strand, 23441 - 23521
Alignment:
Q  12 agatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 92  Q
    ||||||||||||||||||||| |||||||||||| |||||||||  ||||||||||||||||||||||| |||||||||||    
T  23441 agatgaacttaccaaaatatctctaatacatgggatgtacaatggagtgtaggaataaagggtgttcatataacattttcc 23521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 50; Significance: 3e-19; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 9 - 90
Target Start/End: Original strand, 45736 - 45817
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacatttt 90  Q
    |||||||||| |||||||||||||| |||||||| || ||||||||  |||||| || ||||||||||||||||||||||||    
T  45736 gtgagatgaatttaccaaaatatccttaatacataggatgtacaatagggtgtatgattaaagggtgttcatgtaacatttt 45817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 9 - 92
Target Start/End: Original strand, 35473 - 35556
Alignment:
Q  9 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 92  Q
    |||||||||| ||||||| || |||||||| |||||||||||||||  |||||| || |||| |||||| ||||||||||||||    
T  35473 gtgagatgaatttaccaatatgtccctaatgcatggggtgtacaatatggtgtatgattaaatggtgtttatgtaacattttcc 35556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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