View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8438_high_33 (Length: 244)
Name: NF8438_high_33
Description: NF8438
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8438_high_33 |
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Alignment Details
Target: chr5 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 526865 - 527092
Alignment:
| Q |
1 |
tgtgactgtcaaatacattaattgatat--tttacctcttctacacatttgcttctgatcacattgttgaatcaatatttttgaattcctgttctggcag |
98 |
Q |
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| T |
526865 |
tgtgactgtcaaatacattaattgatatattttacctcttctacacatttgcttctgatcacattgttgaatcaatatttttgaattcctgttctggcag |
526964 |
T |
|
| Q |
99 |
gttataagagtaacaaagaaacaagcaacatgtttaatactccacatcaaaaacacagcaagaacatgtatcagaataggtcaacaaggacaagagaaga |
198 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
526965 |
gttataagagtaacaaagaaacaagcaacatgtttaatactccacatcaaaaacacagcaagaacatgtatcagaataggtcaacaaggacaagagaaga |
527064 |
T |
|
| Q |
199 |
agcaaaccaaatgaacatggaggctcct |
226 |
Q |
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|||||||||||||||||||||||||||| |
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| T |
527065 |
agcaaaccaaatgaacatggaggctcct |
527092 |
T |
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