View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8438_low_20 (Length: 349)

Name: NF8438_low_20
Description: NF8438
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8438_low_20
NF8438_low_20
[»] chr2 (39 HSPs)
chr2 (19-338)||(39878048-39878364)
chr2 (23-282)||(26560674-26560932)
chr2 (23-213)||(17850706-17850896)
chr2 (19-284)||(20498746-20499007)
chr2 (23-196)||(22263311-22263484)
chr2 (23-196)||(23806037-23806210)
chr2 (23-214)||(15106134-15106325)
chr2 (35-214)||(23854798-23854977)
chr2 (32-214)||(26135884-26136066)
chr2 (23-283)||(42670839-42671097)
chr2 (19-284)||(19251470-19251732)
chr2 (19-196)||(13284524-13284701)
chr2 (32-196)||(17463176-17463340)
chr2 (18-270)||(33290061-33290312)
chr2 (93-196)||(26236212-26236314)
chr2 (23-99)||(26236277-26236353)
chr2 (138-283)||(23806187-23806330)
chr2 (138-283)||(17850587-17850729)
chr2 (19-79)||(13254638-13254698)
chr2 (138-214)||(15106302-15106378)
chr2 (23-99)||(30390579-30390655)
chr2 (138-284)||(19251705-19251848)
chr2 (228-283)||(39878397-39878450)
chr2 (228-284)||(17463415-17463470)
chr2 (138-285)||(26236330-26236474)
chr2 (145-196)||(13254582-13254633)
chr2 (138-196)||(26560639-26560697)
chr2 (138-196)||(30390544-30390602)
chr2 (142-196)||(34548658-34548712)
chr2 (228-269)||(12419046-12419087)
chr2 (228-269)||(12431106-12431147)
chr2 (231-284)||(17850913-17850965)
chr2 (230-259)||(21482205-21482234)
chr2 (231-284)||(22263520-22263572)
chr2 (160-196)||(13254693-13254729)
chr2 (138-214)||(20498980-20499056)
chr2 (138-214)||(22263258-22263334)
chr2 (235-283)||(23855025-23855072)
chr2 (228-284)||(26236126-26236181)
[»] chr7 (43 HSPs)
chr7 (23-284)||(41600078-41600337)
chr7 (23-283)||(20419656-20419915)
chr7 (23-284)||(12006660-12006919)
chr7 (23-196)||(23704746-23704919)
chr7 (23-284)||(48672399-48672658)
chr7 (60-284)||(28218320-28218542)
chr7 (32-284)||(20963624-20963872)
chr7 (23-214)||(20458811-20459002)
chr7 (23-214)||(38879844-38880035)
chr7 (23-214)||(23383620-23383811)
chr7 (58-283)||(6465855-6466077)
chr7 (20-196)||(31851356-31851532)
chr7 (23-196)||(10409459-10409632)
chr7 (20-196)||(7658088-7658262)
chr7 (23-198)||(44816955-44817130)
chr7 (19-178)||(33162638-33162797)
chr7 (23-269)||(1250326-1250571)
chr7 (93-284)||(25772522-25772710)
chr7 (93-214)||(48648420-48648540)
chr7 (32-131)||(24194941-24195045)
chr7 (139-284)||(28218177-28218321)
chr7 (23-92)||(25772483-25772552)
chr7 (35-99)||(48648393-48648457)
chr7 (139-214)||(7658038-7658113)
chr7 (138-283)||(38879723-38879867)
chr7 (133-216)||(16995264-16995347)
chr7 (138-284)||(23704896-23705039)
chr7 (138-284)||(20458691-20458834)
chr7 (228-284)||(12006540-12006595)
chr7 (138-214)||(48672346-48672422)
chr7 (138-284)||(10409609-10409752)
chr7 (228-283)||(20419536-20419590)
chr7 (138-196)||(24195031-24195089)
chr7 (138-196)||(44816920-44816978)
chr7 (231-284)||(14795549-14795601)
chr7 (231-284)||(15242541-15242593)
chr7 (234-283)||(23704662-23704710)
chr7 (228-284)||(14646974-14647029)
chr7 (159-199)||(24194977-24195017)
chr7 (59-99)||(28218257-28218297)
chr7 (231-283)||(38880048-38880099)
chr7 (231-282)||(44816832-44816884)
chr7 (59-99)||(44816913-44816953)
[»] chr8 (41 HSPs)
chr8 (23-284)||(10108369-10108628)
chr8 (19-212)||(42113100-42113293)
chr8 (23-196)||(17623007-17623180)
chr8 (23-196)||(21148057-21148229)
chr8 (19-284)||(30789623-30789886)
chr8 (23-196)||(7689608-7689781)
chr8 (31-189)||(43851792-43851950)
chr8 (23-196)||(14767627-14767800)
chr8 (23-284)||(26136684-26136943)
chr8 (31-284)||(5554868-5555119)
chr8 (23-283)||(14820295-14820552)
chr8 (31-214)||(2583387-2583570)
chr8 (23-196)||(22494470-22494642)
chr8 (23-196)||(42605838-42606011)
chr8 (23-196)||(43481434-43481607)
chr8 (23-140)||(26532903-26533020)
chr8 (138-284)||(21147935-21148080)
chr8 (141-284)||(17622889-17623027)
chr8 (138-283)||(43851665-43851807)
chr8 (138-214)||(30789574-30789650)
chr8 (138-214)||(42113051-42113127)
chr8 (135-214)||(5555101-5555180)
chr8 (138-289)||(14820529-14820678)
chr8 (231-293)||(42606080-42606141)
chr8 (143-284)||(10171383-10171522)
chr8 (230-283)||(18044153-18044205)
chr8 (119-196)||(21144721-21144798)
chr8 (228-269)||(40487738-40487779)
chr8 (138-196)||(7689758-7689816)
chr8 (230-284)||(7689849-7689902)
chr8 (138-284)||(10108605-10108749)
chr8 (35-125)||(22848451-22848540)
chr8 (138-196)||(26136920-26136978)
chr8 (171-284)||(2583588-2583700)
chr8 (138-214)||(14767574-14767650)
chr8 (228-284)||(20877069-20877124)
chr8 (228-284)||(21148260-21148315)
chr8 (59-99)||(26136945-26136985)
chr8 (228-284)||(26137008-26137063)
chr8 (228-284)||(35367409-35367464)
chr8 (170-214)||(39889629-39889673)
[»] chr1 (47 HSPs)
chr1 (19-284)||(24467628-24467889)
chr1 (19-284)||(18462285-18462546)
chr1 (19-214)||(52058127-52058319)
chr1 (23-196)||(39711157-39711330)
chr1 (23-259)||(4907082-4907317)
chr1 (23-214)||(17606375-17606566)
chr1 (19-214)||(48072028-48072223)
chr1 (23-196)||(13229817-13229989)
chr1 (32-284)||(33628819-33629069)
chr1 (23-283)||(39826170-39826424)
chr1 (19-199)||(42510130-42510310)
chr1 (23-214)||(43539414-43539605)
chr1 (35-214)||(30299298-30299477)
chr1 (23-196)||(20995754-20995926)
chr1 (52-284)||(29696564-29696792)
chr1 (23-283)||(39970766-39971024)
chr1 (31-195)||(8292890-8293057)
chr1 (93-196)||(34749296-34749398)
chr1 (35-150)||(215044-215159)
chr1 (19-152)||(7473908-7474037)
chr1 (23-98)||(34749257-34749332)
chr1 (138-214)||(39970713-39970789)
chr1 (93-196)||(16294137-16294240)
chr1 (109-195)||(30780270-30780356)
chr1 (138-214)||(24467862-24467938)
chr1 (138-214)||(52058078-52058154)
chr1 (138-284)||(20995903-20996046)
chr1 (138-284)||(8293042-8293187)
chr1 (138-284)||(17606543-17606685)
chr1 (138-196)||(18462519-18462577)
chr1 (138-216)||(48072196-48072274)
chr1 (138-211)||(7473862-7473935)
chr1 (228-284)||(4906961-4907016)
chr1 (228-284)||(39711396-39711451)
chr1 (228-283)||(18342341-18342395)
chr1 (228-290)||(30252222-30252285)
chr1 (229-284)||(33628689-33628743)
chr1 (94-131)||(16294211-16294247)
chr1 (228-269)||(17502053-17502094)
chr1 (58-99)||(24467886-24467927)
chr1 (139-196)||(29696794-29696851)
chr1 (58-99)||(52058089-52058130)
chr1 (138-214)||(4907029-4907105)
chr1 (228-280)||(17606307-17606358)
chr1 (228-284)||(20995697-20995752)
chr1 (138-214)||(39826117-39826193)
chr1 (138-214)||(42510081-42510157)
[»] chr4 (47 HSPs)
chr4 (23-280)||(3018014-3018270)
chr4 (23-214)||(9516730-9516921)
chr4 (19-214)||(13132057-13132252)
chr4 (35-284)||(46046556-46046802)
chr4 (23-284)||(37012827-37013085)
chr4 (26-214)||(9396766-9396954)
chr4 (19-196)||(3273707-3273882)
chr4 (23-214)||(7819081-7819272)
chr4 (31-214)||(34064110-34064293)
chr4 (23-213)||(4355949-4356139)
chr4 (23-280)||(38574088-38574343)
chr4 (19-214)||(15640782-15640977)
chr4 (23-269)||(9618993-9619237)
chr4 (23-269)||(31943962-31944208)
chr4 (23-195)||(18667375-18667547)
chr4 (23-214)||(48579986-48580177)
chr4 (23-196)||(31090181-31090354)
chr4 (23-214)||(18713027-18713218)
chr4 (93-196)||(26252353-26252456)
chr4 (93-282)||(35376164-35376347)
chr4 (26-131)||(48259901-48260006)
chr4 (117-196)||(41947070-41947149)
chr4 (32-99)||(26252418-26252486)
chr4 (138-280)||(13131943-13132084)
chr4 (23-77)||(35376332-35376386)
chr4 (228-289)||(31218305-31218365)
chr4 (228-284)||(9619303-9619358)
chr4 (138-214)||(15640950-15641026)
chr4 (170-282)||(34063983-34064093)
chr4 (228-290)||(46046423-46046484)
chr4 (142-269)||(35376367-35376492)
chr4 (138-214)||(37012774-37012850)
chr4 (138-214)||(38574035-38574111)
chr4 (228-284)||(41946964-41947019)
chr4 (138-214)||(48259986-48260062)
chr4 (138-284)||(9396934-9397077)
chr4 (232-283)||(26252565-26252615)
chr4 (138-196)||(3273855-3273913)
chr4 (138-196)||(7819249-7819307)
chr4 (234-284)||(18667620-18667669)
chr4 (228-257)||(12520662-12520691)
chr4 (230-282)||(9516611-9516662)
chr4 (170-198)||(12904829-12904857)
chr4 (170-214)||(18713227-18713271)
chr4 (141-213)||(20069538-20069610)
chr4 (140-196)||(43312294-43312350)
chr4 (228-284)||(48259822-48259877)
[»] chr3 (51 HSPs)
chr3 (23-284)||(45969914-45970173)
chr3 (23-284)||(14171706-14171965)
chr3 (23-196)||(19112885-19113058)
chr3 (23-284)||(30500161-30500419)
chr3 (19-214)||(43572456-43572653)
chr3 (32-284)||(16721990-16722240)
chr3 (23-284)||(49986526-49986786)
chr3 (23-283)||(14161871-14162129)
chr3 (23-214)||(33372473-33372663)
chr3 (31-282)||(52552820-52553065)
chr3 (32-284)||(9267104-9267353)
chr3 (31-284)||(14262164-14262415)
chr3 (35-196)||(21632981-21633142)
chr3 (23-196)||(15328545-15328718)
chr3 (35-214)||(20853828-20854007)
chr3 (23-214)||(45003563-45003754)
chr3 (23-196)||(35995798-35995971)
chr3 (23-212)||(47575392-47575581)
chr3 (19-194)||(4204824-4204999)
chr3 (19-214)||(38283617-38283812)
chr3 (31-283)||(5800605-5800855)
chr3 (23-284)||(17465488-17465746)
chr3 (70-284)||(11003731-11003943)
chr3 (117-214)||(17649224-17649321)
chr3 (138-214)||(4204775-4204851)
chr3 (138-283)||(14162106-14162248)
chr3 (138-214)||(38283785-38283861)
chr3 (135-214)||(43572623-43572702)
chr3 (138-284)||(9266974-9267118)
chr3 (228-284)||(16722315-16722370)
chr3 (228-284)||(19112763-19112818)
chr3 (228-292)||(35741908-35741971)
chr3 (228-286)||(27946189-27946246)
chr3 (138-284)||(35995677-35995821)
chr3 (170-269)||(14262049-14262147)
chr3 (228-283)||(19720333-19720387)
chr3 (170-284)||(20853694-20853807)
chr3 (170-264)||(21633163-21633256)
chr3 (232-270)||(46850513-46850551)
chr3 (58-99)||(4204786-4204827)
chr3 (58-99)||(43572650-43572691)
chr3 (138-199)||(45003731-45003792)
chr3 (171-284)||(45970183-45970295)
chr3 (138-214)||(14171653-14171729)
chr3 (138-214)||(15328695-15328771)
chr3 (59-99)||(21633156-21633196)
chr3 (138-214)||(30500108-30500184)
chr3 (229-269)||(35740830-35740870)
chr3 (59-99)||(35995756-35995796)
chr3 (228-284)||(35995999-35996054)
chr3 (138-214)||(52552759-52552835)
[»] chr5 (38 HSPs)
chr5 (23-214)||(7126037-7126228)
chr5 (19-284)||(24074302-24074564)
chr5 (23-283)||(24837289-24837547)
chr5 (23-284)||(17762282-17762540)
chr5 (23-284)||(14143901-14144159)
chr5 (32-282)||(41001482-41001729)
chr5 (23-214)||(993867-994057)
chr5 (19-214)||(6817238-6817432)
chr5 (23-196)||(4919110-4919283)
chr5 (19-196)||(20709328-20709505)
chr5 (23-196)||(24650820-24650992)
chr5 (23-214)||(29444873-29445064)
chr5 (19-141)||(23979042-23979163)
chr5 (23-196)||(31799760-31799933)
chr5 (93-284)||(14411696-14411885)
chr5 (32-283)||(18336467-18336705)
chr5 (93-214)||(27159147-27159268)
chr5 (53-196)||(22571227-22571370)
chr5 (138-284)||(6817122-6817265)
chr5 (23-99)||(14411847-14411924)
chr5 (138-283)||(23979136-23979279)
chr5 (138-214)||(7125984-7126060)
chr5 (138-214)||(20709279-20709355)
chr5 (160-269)||(22571090-22571198)
chr5 (138-214)||(24650767-24650843)
chr5 (228-284)||(24837168-24837223)
chr5 (59-103)||(30512361-30512405)
chr5 (59-103)||(30552701-30552745)
chr5 (230-269)||(29445131-29445170)
chr5 (170-284)||(17762549-17762661)
chr5 (230-284)||(24651025-24651078)
chr5 (138-196)||(27159075-27159133)
chr5 (231-284)||(7126244-7126296)
chr5 (231-284)||(27158990-27159042)
chr5 (170-283)||(31799640-31799751)
chr5 (160-196)||(20947059-20947095)
chr5 (52-99)||(27159137-27159185)
chr5 (142-194)||(41424603-41424655)
[»] scaffold0809 (2 HSPs)
scaffold0809 (22-214)||(1477-1669)
scaffold0809 (228-285)||(1730-1786)
[»] chr6 (30 HSPs)
chr6 (23-284)||(24731934-24732196)
chr6 (19-196)||(30459017-30459194)
chr6 (23-283)||(9481182-9481440)
chr6 (19-196)||(10321846-10322024)
chr6 (23-214)||(30618029-30618219)
chr6 (32-198)||(3229992-3230157)
chr6 (23-195)||(26385398-26385566)
chr6 (23-196)||(2299430-2299602)
chr6 (23-147)||(33714607-33714731)
chr6 (19-195)||(14680998-14681174)
chr6 (93-196)||(33637644-33637747)
chr6 (63-196)||(18500506-18500640)
chr6 (93-284)||(32017695-32017882)
chr6 (23-98)||(32017656-32017731)
chr6 (63-145)||(17142798-17142880)
chr6 (23-108)||(18500434-18500520)
chr6 (23-99)||(33637709-33637786)
chr6 (138-196)||(9854122-9854180)
chr6 (152-214)||(19284196-19284258)
chr6 (138-214)||(30458968-30459044)
chr6 (138-214)||(14680949-14681025)
chr6 (230-282)||(19284130-19284181)
chr6 (138-284)||(18500314-18500457)
chr6 (138-196)||(9481417-9481475)
chr6 (160-214)||(17142744-17142798)
chr6 (230-284)||(18500655-18500708)
chr6 (228-269)||(10321746-10321787)
chr6 (177-214)||(15942410-15942447)
chr6 (240-289)||(24732273-24732321)
chr6 (228-280)||(26385598-26385649)
[»] scaffold0361 (2 HSPs)
scaffold0361 (23-284)||(4561-4821)
scaffold0361 (228-284)||(4886-4941)
[»] scaffold0141 (3 HSPs)
scaffold0141 (23-191)||(8413-8580)
scaffold0141 (138-269)||(8557-8687)
scaffold0141 (229-284)||(8324-8378)
[»] scaffold0185 (2 HSPs)
scaffold0185 (19-216)||(3985-4182)
scaffold0185 (140-284)||(3868-4010)
[»] scaffold0881 (1 HSPs)
scaffold0881 (32-196)||(349-512)
[»] scaffold0449 (2 HSPs)
scaffold0449 (93-284)||(7389-7579)
scaffold0449 (40-92)||(7367-7420)
[»] scaffold0176 (2 HSPs)
scaffold0176 (70-196)||(15800-15925)
scaffold0176 (231-284)||(15955-16007)
[»] scaffold0117 (1 HSPs)
scaffold0117 (138-278)||(12217-12355)
[»] scaffold0352 (3 HSPs)
scaffold0352 (228-284)||(4666-4721)
scaffold0352 (63-99)||(4745-4781)
scaffold0352 (228-284)||(6003-6058)
[»] scaffold0477 (3 HSPs)
scaffold0477 (23-77)||(4952-5006)
scaffold0477 (230-284)||(4879-4932)
scaffold0477 (93-131)||(4929-4967)
[»] scaffold0157 (1 HSPs)
scaffold0157 (228-257)||(226-255)


Alignment Details
Target: chr2 (Bit Score: 256; Significance: 1e-142; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 19 - 338
Target Start/End: Complemental strand, 39878364 - 39878048
Alignment:
Q  19 atttcaccacgccagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatg 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39878364 atttcaccacgccagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatg 39878265  T
Q  119 aaattacaaggacgtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaatatcn 218  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||     
T  39878264 aaattacagggacgtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattacagatacataatctaaatatc- 39878166  T
Q  219 nnnnnnnaaagggactaaaactggaattcgctaatattacacggacaaaaaagaggtatttaccctctatttttcatgtctattagtatacctttcttct 318  Q
           | |||||||||||| ||||||||||||||||||| |||||||||  |||||||||||||||||||||||||||||||||||||| ||||||||    
T  39878165 tttttttacagggactaaaaccggaattcgctaatattacaaggacaaaaa--aggtatttaccctctatttttcatgtctattagtatacttttcttct 39878068  T
Q  319 acgtttatttatactttcat 338  Q
    ||||||||||||||||||||    
T  39878067 acgtttatttatactttcat 39878048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 23 - 282
Target Start/End: Original strand, 26560674 - 26560932
Alignment:
Q  23 caccacgccagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatgaaat 122  Q
    ||||||| |||||||||||||||| ||| |||||||||||||||| ||||||||||| ||| |||||||| ||||| |||||||||||||||| ||||||    
T  26560674 caccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatttgaaattacagggatcaaaagtgggaggaatctgaaat 26560773  T
Q  123 tacaaggacgtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaatatcnnnnn 222  Q
    |||| |||||||||||||||||||| ||||||| |||||||||||| |||||||||||||||||| ||||||||||   ||| ||||||| | |          
T  26560774 tacagggacgtaatttatgcagattctgctgacgtgatgaaaggagagaccaaaagtggaagaatatgaaattatatggacaaaatctaatttttttttt 26560873  T
Q  223 nnnaaagggactaaaactggaattcgctaatattacacggacaaaaaagaggtatttacc 282  Q
       |  ||||||||||  ||||||||||||||||||| ||||  ||||||||||||||||    
T  26560874 tttaccgggactaaaatcggaattcgctaatattacaaggac-gaaaagaggtatttacc 26560932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 23 - 213
Target Start/End: Original strand, 17850706 - 17850896
Alignment:
Q  23 caccacgccagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatgaaat 122  Q
    ||||||| |||||||||||||||| |||  || |||||||||||| ||||||||||| |||||||||||| ||| |||||||||||||||||| ||||||    
T  17850706 caccacgtcagcagaatctgcatacatggtacctaaaatgagggatcaaaagtggaggaatctgaaattaaaggaaccaaaagtgggaggaatctgaaat 17850805  T
Q  123 tacaaggacgtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaa 213  Q
    ||||||||||||||| ||||||||||||||||| |||||||| ||| ||||||||||||||||||||||||||| ||  ||| ||||||||    
T  17850806 tacaaggacgtaattgatgcagattttgctgacgtgatgaaaagagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaa 17850896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 19 - 284
Target Start/End: Complemental strand, 20499007 - 20498746
Alignment:
Q  19 atttcaccacgccagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatg 118  Q
    ||||||||||  |||||||||||||||| ||  |||||||||||||||| |||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  20499007 atttcaccacatcagcagaatctgcatacatagcacgtaaaatgagggatcaaaagtggagtgatctgaaattacagggaccaaaagtgggaggaatatg 20498908  T
Q  119 aaattacaaggacgtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaatatcn 218  Q
    |||||| |  ||||||||||||||||||| | ||||| |||| ||||||| |||||||||||||||||||||||| || ||  |||||||||||||||      
T  20498907 aaattatattgacgtaatttatgcagattctactgacgtgataaaaggagggaccaaaagtggaagaatctgaaa-tacagggacataatctaaatat-- 20498811  T
Q  219 nnnnnnnaaagggactaaaactggaattcgctaatattacacggacaaaaaagaggtatttaccct 284  Q
           | |||||||||||| | |||||||||||||||||  |||  ||||||||||||||||||    
T  20498810 tttttttacagggactaaaaccgtaattcgctaatattacatagac-gaaaagaggtatttaccct 20498746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 23 - 196
Target Start/End: Original strand, 22263311 - 22263484
Alignment:
Q  23 caccacgccagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatgaaat 122  Q
    ||||||| |||||||||||||||| ||| |||||||||||||||||||||||||||| ||| |||||||| ||||||||||| | |||||||| ||||||    
T  22263311 caccacgtcagcagaatctgcatacatggcacgtaaaatgagggaccaaaagtggaggaatttgaaattacagggaccaaaactaggaggaatctgaaat 22263410  T
Q  123 tacaaggacgtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaatta 196  Q
    |||| |||||||||||||||||||| ||||||| |||||||||||| |||||||||||||||||| ||||||||    
T  22263411 tacagggacgtaatttatgcagattatgctgacgtgatgaaaggagggaccaaaagtggaagaatatgaaatta 22263484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 23 - 196
Target Start/End: Complemental strand, 23806210 - 23806037
Alignment:
Q  23 caccacgccagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatgaaat 122  Q
    ||||||| ||||| ||| |||||| ||| |||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||| ||||||    
T  23806210 caccacgtcagcaaaatttgcatacatggcacgtaaaatgagggaccaaaagtggaggaatctgaaattatagggaccaaaagtgggaggaatctgaaat 23806111  T
Q  123 tacaaggacgtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaatta 196  Q
    |||| ||||||||||||||| |||| ||||||| |||||||||||| |||||||||||||||||||| ||||||    
T  23806110 tacagggacgtaatttatgcggattctgctgacgtgatgaaaggagggaccaaaagtggaagaatctaaaatta 23806037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 23 - 214
Target Start/End: Complemental strand, 15106325 - 15106134
Alignment:
Q  23 caccacgccagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatgaaat 122  Q
    ||||||| ||||| |||||||||| ||| |||||||||||||||| ||||||||||| |||||||||||| |||||||||||||||||||||| ||||||    
T  15106325 caccacgtcagcaaaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaattacagggaccaaaagtgggaggaatctgaaat 15106226  T
Q  123 tacaaggacgtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaat 214  Q
    ||||||||| ||||| |||||||||| |||||| |||||||||||| |||||||||||||| ||||| |||||| ||  ||| |||||||||    
T  15106225 tacaaggacttaattgatgcagatttagctgacgtgatgaaaggagggaccaaaagtggaataatctaaaattacagggacaaaatctaaat 15106134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 35 - 214
Target Start/End: Original strand, 23854798 - 23854977
Alignment:
Q  35 agaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatgaaattacaaggacgta 134  Q
    |||||||||||| ||| |||||||||||||||||||||||||||| ||| |||||||| ||||| |||||||||||||||| |||||||||| |||||||    
T  23854798 agaatctgcatacatggcacgtaaaatgagggaccaaaagtggaggaatttgaaattacagggatcaaaagtgggaggaatctgaaattacagggacgta 23854897  T
Q  135 atttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaat 214  Q
    ||||||||||||| ||||||| |||||||||||| |||||||||||||||||| | |||||| ||| ||| |||||||||    
T  23854898 atttatgcagattctgctgacgtgatgaaaggagggaccaaaagtggaagaatataaaattacagagacaaaatctaaat 23854977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 32 - 214
Target Start/End: Complemental strand, 26136066 - 26135884
Alignment:
Q  32 agcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatgaaattacaaggac 131  Q
    ||||||||||||||| |||  ||||||||| ||||||||||||||||| ||||| |||||| | |||||||||||| ||||||| |||||||||||||||    
T  26136066 agcagaatctgcatacatggtacgtaaaataagggaccaaaagtggaggaatctaaaattacaaggaccaaaagtgagaggaatctgaaattacaaggac 26135967  T
Q  132 gtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaat 214  Q
    |||||||||||||||| || ||||||||||||||||| |||||||||| |||||||||||||||| ||  ||| |||||||||    
T  26135966 gtaatttatgcagattctgttgacttgatgaaaggagggaccaaaagtagaagaatctgaaattacagggacaaaatctaaat 26135884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 23 - 283
Target Start/End: Original strand, 42670839 - 42671097
Alignment:
Q  23 caccacgccagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatgaaat 122  Q
    ||||||| ||||| ||| ||| || ||| |||||||||||||||||||||| ||||| ||| |||||||| ||||||||||| | |||||||| ||||||    
T  42670839 caccacgtcagcaaaatttgcttacatggcacgtaaaatgagggaccaaaaatggaggaatttgaaattacagggaccaaaactaggaggaatctgaaat 42670938  T
Q  123 tacaaggacgtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaatatcnnnnn 222  Q
    |||| | |||||||||||||||||| ||||||| |||||||||||| |||||||||||||| ||| |||||||| ||  |||||||||||||  |         
T  42670939 tacaggaacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtggaaaaatatgaaattacagggacataatctaaat-ccttttt 42671037  T
Q  223 nnnaaagggactaaaactggaattcgctaatattacacggacaaaaaagaggtatttaccc 283  Q
       | |||||||||||||| |||||||||||| |||| |||| ||||||||||||||||||    
T  42671038 tttacagggactaaaactgaaattcgctaatactacagggac-aaaaagaggtatttaccc 42671097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 19 - 284
Target Start/End: Complemental strand, 19251732 - 19251470
Alignment:
Q  19 atttcaccacgccagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatg 118  Q
    ||||||||||| |||||||||||||||| ||| |||||||||||| ||||||||||||||| ||| |||||||| ||||| ||||||| |||||||| ||    
T  19251732 atttcaccacgtcagcagaatctgcatacatggcacgtaaaatgatggaccaaaagtggaggaatatgaaattacagggatcaaaagttggaggaatttg 19251633  T
Q  119 aaattacaaggacgtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaatatcn 218  Q
    |||||||||| || ||||||||| | ||| ||||||  |||||||||||| |||||||||||||||||| |||||||| ||  ||| |||||||  |||     
T  19251632 aaattacaagaacataatttatgtatattctgctgatgtgatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatctaa--atct 19251535  T
Q  219 nnnnnnnaaagggactaaaactggaattcgctaatattacacggacaaaaaagaggtatttaccct 284  Q
           | |||||||||||| | ||||||||||||||||| ||||  |||||||||||| |||||    
T  19251534 tttttttacagggactaaaaccgaaattcgctaatattacagggac-gaaaagaggtattaaccct 19251470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 19 - 196
Target Start/End: Original strand, 13284524 - 13284701
Alignment:
Q  19 atttcaccacgccagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatg 118  Q
    ||||||||||| || ||||||||||||| ||||||||| ||||||||||||||||||| || ||| |||||||| |||||||||||||||||||||| |     
T  13284524 atttcaccacgacaacagaatctgcatacatgacacgtgaaatgagggaccaaaagtgaagaaatatgaaattacagggaccaaaagtgggaggaatctt 13284623  T
Q  119 aaattacaaggacgtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaatta 196  Q
    ||||||||||||||||||||||| ||||| || |||| || | ||| ||| ||||||||||||| |||||||||||||    
T  13284624 aaattacaaggacgtaatttatgtagattctgttgacgtggttaaatgagggaccaaaagtggaggaatctgaaatta 13284701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 32 - 196
Target Start/End: Complemental strand, 17463340 - 17463176
Alignment:
Q  32 agcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatgaaattacaaggac 131  Q
    ||||||||||||||| ||| || ||||||||||||||||||| | ||| ||||| |||||| |||||||||||||||||||||| |||||||||| ||||    
T  17463340 agcagaatctgcatacatggcatgtaaaatgagggaccaaaattagaggaatctaaaattacagggaccaaaagtgggaggaatctgaaattacagggac 17463241  T
Q  132 gtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaatta 196  Q
    |||||||||||||||| || ||||||||||||| ||| |||||||||||| |||| |||||||||    
T  17463240 gtaatttatgcagattctgttgacttgatgaaatgagggaccaaaagtgggagaacctgaaatta 17463176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 18 - 270
Target Start/End: Complemental strand, 33290312 - 33290061
Alignment:
Q  18 aatttcaccacgccagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatat 117  Q
    |||||||||||| ||  | |||||||||| ||| | | | ||||||||||||||||||||||  ||||||||||| |||||||||||| ||||||||| |    
T  33290312 aatttcaccacgtcaaaaaaatctgcatacatggctcatgaaatgagggaccaaaagtggaggtatctgaaattacagggaccaaaagggggaggaatct 33290213  T
Q  118 gaaattacaaggacgtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaatatc 217  Q
    ||||||||| ||||| |||||||||||||| ||||||| || | |||  || ||||||||||||| || | |||||||| |   ||| ||||||||| |     
T  33290212 gaaattacagggacgaaatttatgcagattctgctgacgtggttaaataagggaccaaaagtggaggagtatgaaattacaaggacagaatctaaat-tt 33290114  T
Q  218 nnnnnnnnaaagggactaaaactggaattcgctaatattacacggacaaaaaa 270  Q
            | |||||||||||||||||||||||||||||||| |||| |||||    
T  33290113 tttattttacagggactaaaactggaattcgctaatattacagggaccaaaaa 33290061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 93 - 196
Target Start/End: Complemental strand, 26236314 - 26236212
Alignment:
Q  93 gagggaccaaaagtgggaggaatatgaaattacaaggacgtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaa 192  Q
    |||||||||||||||| ||||||||||||||||| |||||||||||||||| ||| ||||||| |||||||||||| ||||||||||| |||||||||||    
T  26236314 gagggaccaaaagtgg-aggaatatgaaattacagggacgtaatttatgcaaattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatctgaa 26236216  T
Q  193 atta 196  Q
    ||||    
T  26236215 atta 26236212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 23 - 99
Target Start/End: Complemental strand, 26236353 - 26236277
Alignment:
Q  23 caccacgccagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggac 99  Q
    |||||||  ||||||||||||||| ||| |||||||||||||||||||||||||||| ||| |||||||| ||||||    
T  26236353 caccacgtaagcagaatctgcatacatggcacgtaaaatgagggaccaaaagtggaggaatatgaaattacagggac 26236277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 138 - 283
Target Start/End: Original strand, 23806187 - 23806330
Alignment:
Q  138 tatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaatatcnnnnnnnnaaagggactaaa 237  Q
    |||||| ||||||||||| || || || ||| |||||||||||||||||| |||||||| ||  ||| ||||||||| |         | ||||||||||    
T  23806187 tatgcaaattttgctgacgtggtggaatgagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatct-ttttttttacagggactaaa 23806285  T
Q  238 actggaattcgctaatattacacggacaaaaaagaggtatttaccc 283  Q
    || | ||||||||||||||||| |||| ||||||||||||||||||    
T  23806286 accgaaattcgctaatattacagggac-aaaaagaggtatttaccc 23806330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 138 - 283
Target Start/End: Complemental strand, 17850729 - 17850587
Alignment:
Q  138 tatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaatatcnnnnnnnnaaagggactaaa 237  Q
    |||||||||| ||||||| || || || ||| || ||||||||||||||||| |||||| ||| ||| |||||||  |||        | ||||||||||    
T  17850729 tatgcagattctgctgacgtggtggaatgagggatcaaaagtggaagaatcttaaattacagagacaaaatctaa--atcttttttttatagggactaaa 17850632  T
Q  238 actggaattcgctaatattacacggacaaaaaagaggtatttaccc 283  Q
    |  ||||||||||||||||||| ||||  |||||||||||||||||    
T  17850631 atcggaattcgctaatattacagggac-gaaaagaggtatttaccc 17850587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 19 - 79
Target Start/End: Complemental strand, 13254698 - 13254638
Alignment:
Q  19 atttcaccacgccagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggag 79  Q
    ||||||||||   ||||||||| | ||| ||||||||||||||||||||||||||||||||    
T  13254698 atttcaccacataagcagaatcagtatacatgacacgtaaaatgagggaccaaaagtggag 13254638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 138 - 214
Target Start/End: Original strand, 15106302 - 15106378
Alignment:
Q  138 tatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaat 214  Q
    |||||||||||||||||| || || || ||| || |||||||||||||||||||||||| ||  ||| |||||||||    
T  15106302 tatgcagattttgctgacgtggtggaatgagggatcaaaagtggaagaatctgaaattacagggacaaaatctaaat 15106378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 23 - 99
Target Start/End: Original strand, 30390579 - 30390655
Alignment:
Q  23 caccacgccagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggac 99  Q
    |||||||  |||| |||||||||| ||  |||||||||||||||||||||| || || |||||||||||| ||||||    
T  30390579 caccacgtaagcaaaatctgcatacatagcacgtaaaatgagggaccaaaaatgaaggaatctgaaattacagggac 30390655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 138 - 284
Target Start/End: Original strand, 19251705 - 19251848
Alignment:
Q  138 tatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaatatcnnnnnnnnaaagggactaaa 237  Q
    |||||||||| ||||||| || ||||| ||| |||| ||||||||||||| |||||||| |   ||| |||||||||  |        | ||||||||||    
T  19251705 tatgcagattctgctgacgtggtgaaatgagggaccgaaagtggaagaatatgaaattacaaggacagaatctaaat--cttttttttacagggactaaa 19251802  T
Q  238 actggaattcgctaatattacacggacaaaaaagaggtatttaccct 284  Q
    || ||||||| ||||||||||| ||||  ||||||||||||||||||    
T  19251803 accggaattcactaatattacaaggac-gaaaagaggtatttaccct 19251848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 228 - 283
Target Start/End: Original strand, 39878397 - 39878450
Alignment:
Q  228 agggactaaaactggaattcgctaatattacacggacaaaaaagaggtatttaccc 283  Q
    |||||| ||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  39878397 agggacgaaaactggaattcgctaatattaca-ggac-aaaaagaggtatttaccc 39878450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 284
Target Start/End: Original strand, 17463415 - 17463470
Alignment:
Q  228 agggactaaaactggaattcgctaatattacacggacaaaaaagaggtatttaccct 284  Q
    |||||||||||| ||||||||||||||||||| || |  ||||||||||||||||||    
T  17463415 agggactaaaaccggaattcgctaatattacaggggc-gaaaagaggtatttaccct 17463470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 138 - 285
Target Start/End: Original strand, 26236330 - 26236474
Alignment:
Q  138 tatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaatatcnnnnnnnnaaagggactaaa 237  Q
    |||||||||| |||| || || || || ||| |||||||| |||||||||||||||||| ||  ||| ||||||||| |         ||  ||||||||    
T  26236330 tatgcagattctgcttacgtggtggaatgagggaccaaaaatggaagaatctgaaattacagggacaaaatctaaatcttttttttccaa--ggactaaa 26236427  T
Q  238 actggaattcgctaatattacacggacaaaaaagaggtatttaccctc 285  Q
    || | ||||||||||||||||| ||||  |||||||||||||||||||    
T  26236428 accgaaattcgctaatattacagggac-gaaaagaggtatttaccctc 26236474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 145 - 196
Target Start/End: Complemental strand, 13254633 - 13254582
Alignment:
Q  145 attttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaatta 196  Q
    |||||| |||| ||||||||||||  |||||||||| |||||||||||||||    
T  13254633 attttgttgacgtgatgaaaggaggaaccaaaagtgaaagaatctgaaatta 13254582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 138 - 196
Target Start/End: Complemental strand, 26560697 - 26560639
Alignment:
Q  138 tatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaatta 196  Q
    |||||||||| ||||||| || || ||  || |||||||||||||||||||||||||||    
T  26560697 tatgcagattctgctgacgtggtggaataagggaccaaaagtggaagaatctgaaatta 26560639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 138 - 196
Target Start/End: Complemental strand, 30390602 - 30390544
Alignment:
Q  138 tatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaatta 196  Q
    ||||||||||||||| || || || || ||| |||||||||||||||||| ||||||||    
T  30390602 tatgcagattttgcttacgtggtggaatgagggaccaaaagtggaagaatatgaaatta 30390544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 142 - 196
Target Start/End: Complemental strand, 34548712 - 34548658
Alignment:
Q  142 cagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaatta 196  Q
    |||||| | ||||| |||||||||||||||||||| |||||| ||| ||||||||    
T  34548712 cagattctactgacgtgatgaaaggagtgaccaaaggtggaacaatatgaaatta 34548658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 269
Target Start/End: Original strand, 12419046 - 12419087
Alignment:
Q  228 agggactaaaactggaattcgctaatattacacggacaaaaa 269  Q
    |||||||||||| ||||||||||||||||||| |||| ||||    
T  12419046 agggactaaaaccggaattcgctaatattacagggaccaaaa 12419087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 269
Target Start/End: Original strand, 12431106 - 12431147
Alignment:
Q  228 agggactaaaactggaattcgctaatattacacggacaaaaa 269  Q
    |||||||||||| ||||||||||||||||||| |||| ||||    
T  12431106 agggactaaaaccggaattcgctaatattacagggaccaaaa 12431147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 284
Target Start/End: Original strand, 17850913 - 17850965
Alignment:
Q  231 gactaaaactggaattcgctaatattacacggacaaaaaagaggtatttaccct 284  Q
    ||||||||| | ||||||||||||||||| ||||  ||||||||||||||||||    
T  17850913 gactaaaaccgaaattcgctaatattacagggac-gaaaagaggtatttaccct 17850965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 259
Target Start/End: Original strand, 21482205 - 21482234
Alignment:
Q  230 ggactaaaactggaattcgctaatattaca 259  Q
    ||||||||||||||||||||||||||||||    
T  21482205 ggactaaaactggaattcgctaatattaca 21482234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 284
Target Start/End: Original strand, 22263520 - 22263572
Alignment:
Q  231 gactaaaactggaattcgctaatattacacggacaaaaaagaggtatttaccct 284  Q
    ||||||||| ||||||||||||||||||| |||   ||||||||||||||||||    
T  22263520 gactaaaaccggaattcgctaatattaca-ggaacgaaaagaggtatttaccct 22263572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 160 - 196
Target Start/End: Original strand, 13254693 - 13254729
Alignment:
Q  160 tgaaaggagtgaccaaaagtggaagaatctgaaatta 196  Q
    ||||| ||| |||||||||||||||||||||||||||    
T  13254693 tgaaatgagggaccaaaagtggaagaatctgaaatta 13254729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 138 - 214
Target Start/End: Original strand, 20498980 - 20499056
Alignment:
Q  138 tatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaat 214  Q
    |||||||||| ||||||  || ||||| ||  ||||||||||| ||||||||||||||| ||  ||| |||||||||    
T  20498980 tatgcagattctgctgatgtggtgaaatgaaggaccaaaagtgaaagaatctgaaattacagggacaaaatctaaat 20499056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 138 - 214
Target Start/End: Complemental strand, 22263334 - 22263258
Alignment:
Q  138 tatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaat 214  Q
    |||||||||| ||||||| || || ||  || |||||||||||||||||| |||||||| ||  ||| |||||||||    
T  22263334 tatgcagattctgctgacgtggtggaataagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaat 22263258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 235 - 283
Target Start/End: Original strand, 23855025 - 23855072
Alignment:
Q  235 aaaactggaattcgctaatattacacggacaaaaaagaggtatttaccc 283  Q
    ||||| ||||||||||||||||||| ||||  |||||||||||||||||    
T  23855025 aaaaccggaattcgctaatattacagggac-gaaaagaggtatttaccc 23855072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 228 - 284
Target Start/End: Complemental strand, 26236181 - 26236126
Alignment:
Q  228 agggactaaaactggaattcgctaatattacacggacaaaaaagaggtatttaccct 284  Q
    ||||||||||||  |||||||||||||||||| ||||  ||||||| ||||||||||    
T  26236181 agggactaaaaccagaattcgctaatattacaaggac-gaaaagagatatttaccct 26236126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 146; Significance: 7e-77; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 146; E-Value: 7e-77
Query Start/End: Original strand, 23 - 284
Target Start/End: Original strand, 41600078 - 41600337
Alignment:
Q  23 caccacgccagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatgaaat 122  Q
    |||||||  ||||||||||||||| ||| |||||||||||||||| ||||||||||| |||||||||||| |||||||||||||||||||||| ||||||    
T  41600078 caccacgttagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaattacagggaccaaaagtgggaggaatctgaaat 41600177  T
Q  123 tacaaggacgtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaatatcnnnnn 222  Q
    ||||||||||||||| ||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||| ||  ||| ||||||||| |          
T  41600178 tacaaggacgtaattgatgcagattttgctgacgtgatgaaaggagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatct-tttta 41600276  T
Q  223 nnnaaagggactaaaactggaattcgctaatattacacggacaaaaaagaggtatttaccct 284  Q
       | |||||||||||| ||||||||||||||||||| |||| |||||||||||||||||||    
T  41600277 tttacagggactaaaaccggaattcgctaatattacagggac-aaaaagaggtatttaccct 41600337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 23 - 283
Target Start/End: Original strand, 20419656 - 20419915
Alignment:
Q  23 caccacgccagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatgaaat 122  Q
    |||||||  ||||||||||||||| |||  ||||||||||||||||||||||||||| ||| |||||||| |||||||||||||||||||||| ||||||    
T  20419656 caccacgtaagcagaatctgcatacatggtacgtaaaatgagggaccaaaagtggaggaatatgaaattacagggaccaaaagtgggaggaatctgaaat 20419755  T
Q  123 tacaaggacgtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaatatcnnnnn 222  Q
    ||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||| |||||||||||||||| ||  ||| ||||||||| |          
T  20419756 tacaaggacgtaatttatgaagattttgttgacttgatgaaaggagggaccaaaagtagaagaatctgaaattacagggacaaaatctaaatcttttttt 20419855  T
Q  223 nnnaaagggactaaaactggaattcgctaatattacacggacaaaaaagaggtatttaccc 283  Q
       | |||||||||||| |||||||| |||||||||| |||| ||||||||||||||||||    
T  20419856 tttacagggactaaaaccggaattcgttaatattacagggac-aaaaagaggtatttaccc 20419915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 23 - 284
Target Start/End: Original strand, 12006660 - 12006919
Alignment:
Q  23 caccacgccagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatgaaat 122  Q
    |||||||  ||||||||||||||| ||| |||||||||||||||| ||||||||||| |||||||||||| || ||||||||||||||||||| ||||||    
T  12006660 caccacgttagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaattacagtgaccaaaagtgggaggaatctgaaat 12006759  T
Q  123 tacaaggacgtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaatatcnnnnn 222  Q
    ||||||||||||||| ||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||| ||  ||| ||||||||| |          
T  12006760 tacaaggacgtaattgatgcagattttgctgacgtgatgaaaggagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatct-tttta 12006858  T
Q  223 nnnaaagggactaaaactggaattcgctaatattacacggacaaaaaagaggtatttaccct 284  Q
       | |||||||||||  ||||||||||||||||||| | ||  ||||||||||||||||||    
T  12006859 tttacagggactaaaatcggaattcgctaatattacatgaac-gaaaagaggtatttaccct 12006919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 23 - 196
Target Start/End: Complemental strand, 23704919 - 23704746
Alignment:
Q  23 caccacgccagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatgaaat 122  Q
    |||||||  ||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||| ||||||    
T  23704919 caccacgtaagcagaatctgcatacatggcacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggaccaaaagtgggaggaatctgaaat 23704820  T
Q  123 tacaaggacgtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaatta 196  Q
    |||| ||| |||||||||||||||| |  ||||||||||||||||| |||||||||||||||||||||||||||    
T  23704819 tacagggaagtaatttatgcagattctattgacttgatgaaaggagggaccaaaagtggaagaatctgaaatta 23704746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 23 - 284
Target Start/End: Original strand, 48672399 - 48672658
Alignment:
Q  23 caccacgccagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatgaaat 122  Q
    ||||||| |||||||||||||||| ||| || ||||||||||||| ||||||||||| |||||||||||| | |||||||||||||||||||| ||||||    
T  48672399 caccacgtcagcagaatctgcatacatggcatgtaaaatgagggatcaaaagtggaggaatctgaaattacaaggaccaaaagtgggaggaatttgaaat 48672498  T
Q  123 tacaaggacgtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaatatcnnnnn 222  Q
    ||||||||||||||| |||||||||||||| || |||||||||||| ||||||||||||||||||||||||||| ||  | | ||||||||| |          
T  48672499 tacaaggacgtaattgatgcagattttgctaacgtgatgaaaggagggaccaaaagtggaagaatctgaaattacagggataaaatctaaatct-tttta 48672597  T
Q  223 nnnaaagggactaaaactggaattcgctaatattacacggacaaaaaagaggtatttaccct 284  Q
       | |||||||||||| | |||||||||||||||||  |||  ||||||||||||||||||    
T  48672598 tttacagggactaaaaccgaaattcgctaatattacagagac-gaaaagaggtatttaccct 48672658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 60 - 284
Target Start/End: Original strand, 28218320 - 28218542
Alignment:
Q  60 atgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatgaaattacaaggacgtaatttatgcagattttgctgacttga 159  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||| |||||||||| |||||||||||| |||| |||    
T  28218320 atgagggaccaaaagtggagtaatctgaaattacagggaccaaaagtgggaggaatctgaaattacagggacgtaattgatgcagattttgttgacgtga 28218419  T
Q  160 tgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaatatcnnnnnnnnaaagggactaaaactggaattcgctaatattaca 259  Q
    ||||||||| ||||||||||||||||||||||||||| ||  ||| ||||||||| |         | |||||||||||| |||||||||||||||||||    
T  28218420 tgaaaggagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatct-ttttatttacagggactaaaaccggaattcgctaatattaca 28218518  T
Q  260 cggacaaaaaagaggtatttaccct 284  Q
     ||||  ||||||||||||||||||    
T  28218519 gggac-gaaaagaggtatttaccct 28218542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 32 - 284
Target Start/End: Original strand, 20963624 - 20963872
Alignment:
Q  32 agcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatgaaattacaaggac 131  Q
    ||||||||||||||| ||| |||||||||||||||||||||||||||  ||| |||||||| | ||||||||||||||||||||||||||||||| ||||    
T  20963624 agcagaatctgcatacatggcacgtaaaatgagggaccaaaagtggaagaatatgaaattacaaggaccaaaagtgggaggaatatgaaattacagggac 20963723  T
Q  132 gtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaatatcnnnnnnnnaaaggg 231  Q
    |||||||||||| ||| || |||| |||||||||||| ||||||||||| ||||||||||||||| ||  ||  ||||||||| |         | ||||    
T  20963724 gtaatttatgcaaattatgttgacgtgatgaaaggag-gaccaaaagtgaaagaatctgaaattacagggactaaatctaaattt--tatttttacaggg 20963820  T
Q  232 actaaaactggaattcgctaatattacacggacaaaaaagaggtatttaccct 284  Q
    |||||||| ||||||||||||||||||| |||| |||||||||||||||||||    
T  20963821 actaaaaccggaattcgctaatattacagggac-aaaaagaggtatttaccct 20963872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 23 - 214
Target Start/End: Original strand, 20458811 - 20459002
Alignment:
Q  23 caccacgccagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatgaaat 122  Q
    |||||||  ||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||||||| | |||||||||| ||||||||| ||||||    
T  20458811 caccacgtaagcagaatctgcatacatggcacgtaaaatgagggaccaaaagtggaggaatctgaaattacaaggaccaaaagcgggaggaatctgaaat 20458910  T
Q  123 tacaaggacgtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaat 214  Q
    |||| |||||||||||||||| ||| || ||||||||| ||||||| ||||||||||||||||||||||||||| ||  ||| |||||||||    
T  20458911 tacagggacgtaatttatgcaaattctgttgacttgatcaaaggagggaccaaaagtggaagaatctgaaattacagtgacaaaatctaaat 20459002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 23 - 214
Target Start/End: Original strand, 38879844 - 38880035
Alignment:
Q  23 caccacgccagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatgaaat 122  Q
    |||||||  ||||||||||||||| ||| ||| |||||||||||||||||  ||||| |||||||||||| || ||||||||||||||||||||||||||    
T  38879844 caccacgtaagcagaatctgcatacatggcacataaaatgagggaccaaatttggaggaatctgaaattatagagaccaaaagtgggaggaatatgaaat 38879943  T
Q  123 tacaaggacgtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaat 214  Q
    |||| |||||||||||||||||||| || ||||||| ||||||||| ||||||||||||||||||||||||||| ||  ||| |||||||||    
T  38879944 tacagggacgtaatttatgcagattctgttgacttggtgaaaggagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaat 38880035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 23 - 214
Target Start/End: Original strand, 23383620 - 23383811
Alignment:
Q  23 caccacgccagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatgaaat 122  Q
    |||||||  ||||||||||||||| ||||||||||||||||||||||||||||| || ||| |||||||| | |||||||||||||||||||| | ||||    
T  23383620 caccacgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtgaaggaatttgaaattacaaggaccaaaagtgggaggaatctaaaat 23383719  T
Q  123 tacaaggacgtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaat 214  Q
    |||||||||||| |||||||||||| || ||||||||||||||||| ||||||| |||||||||| |||||||| ||  ||| |||||||||    
T  23383720 tacaaggacgtagtttatgcagattctgttgacttgatgaaaggagggaccaaaggtggaagaatatgaaattacagggacaaaatctaaat 23383811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 58 - 283
Target Start/End: Complemental strand, 6466077 - 6465855
Alignment:
Q  58 aaatgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatgaaattacaaggacgtaatttatgcagattttgctgactt 157  Q
    |||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||| |||||||||| |||| ||||||||||||||| | ||||| |    
T  6466077 aaatgagggaccaaaagtggagtaatatgaaattacagggatcaaaagtgggaggaatttgaaattacagggacataatttatgcagattcttctgacgt 6465978  T
Q  158 gatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaatatcnnnnnnnnaaagggactaaaactggaattcgctaatatta 257  Q
    ||||||||||| ||||||||||||||||||||||||||| |   |||||||||||||||         | |||||||||||| |||||||||||||||||    
T  6465977 gatgaaaggagggaccaaaagtggaagaatctgaaattacaagaacataatctaaatat--tttttttacagggactaaaaccggaattcgctaatatta 6465880  T
Q  258 cacggacaaaaaagaggtatttaccc 283  Q
    || |||| ||||| || |||||||||    
T  6465879 catggacgaaaaa-agatatttaccc 6465855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 20 - 196
Target Start/End: Original strand, 31851356 - 31851532
Alignment:
Q  20 tttcaccacgccagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatga 119  Q
    |||||||||| |||||||||||||||| ||| |||||||||||||||||||||||||||| ||| |||||||| ||||| ||||| || ||||||| |||    
T  31851356 tttcaccacgtcagcagaatctgcatacatggcacgtaaaatgagggaccaaaagtggagaaatatgaaattacagggatcaaaattgagaggaatctga 31851455  T
Q  120 aattacaaggacgtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaatta 196  Q
    ||||||| |||||||||||||||| ||| ||||||  |||||||||||| |||||||||||||||||| ||||||||    
T  31851456 aattacagggacgtaatttatgcatattctgctgatgtgatgaaaggagagaccaaaagtggaagaatatgaaatta 31851532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 23 - 196
Target Start/End: Complemental strand, 10409632 - 10409459
Alignment:
Q  23 caccacgccagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatgaaat 122  Q
    |||||||  ||||||||||||||| ||| || ||||||||||||| ||||||||||| |||||||||||| | ||||||||||| |||||||| ||||||    
T  10409632 caccacgttagcagaatctgcatacatggcatgtaaaatgagggatcaaaagtggaggaatctgaaattacaaggaccaaaagtaggaggaatctgaaat 10409533  T
Q  123 tacaaggacgtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaatta 196  Q
    ||||||||||||||| ||||||||||||||||  ||||||||| || ||| |||||| ||||||||||||||||    
T  10409532 tacaaggacgtaattgatgcagattttgctgaagtgatgaaagaagggactaaaagtagaagaatctgaaatta 10409459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 20 - 196
Target Start/End: Original strand, 7658088 - 7658262
Alignment:
Q  20 tttcaccacgccagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatga 119  Q
    ||||| |||| ||||| |||||||||  ||| ||||||||||||||||| |||||| ||  |||||||||||| ||| ||||||||||||||||||||||    
T  7658088 tttcatcacgtcagcaaaatctgcatc-atgtcacgtaaaatgagggactaaaagtagatgaatctgaaattaaagg-accaaaagtgggaggaatatga 7658185  T
Q  120 aattacaaggacgtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaatta 196  Q
    ||||||| |||| ||||||||||||||||||||||| |||||||||||| |||||||||||||||||||| ||||||    
T  7658186 aattacagggacataatttatgcagattttgctgacgtgatgaaaggagagaccaaaagtggaagaatcttaaatta 7658262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 23 - 198
Target Start/End: Original strand, 44816955 - 44817130
Alignment:
Q  23 caccacgccagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatgaaat 122  Q
    |||||||  ||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||||||| | ||||||||||||| |||||| |||||     
T  44816955 caccacgtaagcagaatctgcatacatggcacgtaaaatgagggaccaaaagtggaggaatctgaaattacaaggaccaaaagtggaaggaatttgaaac 44817054  T
Q  123 tacaaggacgtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattata 198  Q
    |||| | |||||||||||||||||| |  ||||||||||||| ||| ||||||||||| |||||| ||||||||||    
T  44817055 tacatgtacgtaatttatgcagattctattgacttgatgaaaagagggaccaaaagtgaaagaatatgaaattata 44817130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 19 - 178
Target Start/End: Complemental strand, 33162797 - 33162638
Alignment:
Q  19 atttcaccacgccagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatg 118  Q
    ||||||||||| |||||||||||||||| ||| ||| ||||||||||||||||||||| ||||||||||||||| | ||||||||||||| |||||| ||    
T  33162797 atttcaccacgtcagcagaatctgcatacatggcacataaaatgagggaccaaaagtgaagtaatctgaaattacacggaccaaaagtggaaggaatttg 33162698  T
Q  119 aaattacaaggacgtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaag 178  Q
    |||||||||| ||||||||||| |||||| | ||||| ||||||||| || || ||||||    
T  33162697 aaattacaagaacgtaatttatacagattctactgacgtgatgaaagaagggatcaaaag 33162638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 23 - 269
Target Start/End: Original strand, 1250326 - 1250571
Alignment:
Q  23 caccacgccagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatgaaat 122  Q
    ||||||| |||| ||||||||||| ||| || ||||||||| |||  |||||||||| ||| || ||||| || |||||||| | |||||||| ||||||    
T  1250326 caccacgtcagctgaatctgcatacatgtcatgtaaaatgaaggattaaaagtggaggaatatggaattacagtgaccaaaaataggaggaatttgaaat 1250425  T
Q  123 tacaaggacgtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaatatcnnnnn 222  Q
    |||| |||||||||||||||||||| | ||||| |||||||||||| |||||||||||||||||| |||||||| ||  ||| ||||||||| |          
T  1250426 tacagggacgtaatttatgcagattcttctgacgtgatgaaaggagggaccaaaagtggaagaatatgaaattaaagggacaaaatctaaatct-tttag 1250524  T
Q  223 nnnaaagggactaaaactggaattcgctaatattacacggacaaaaa 269  Q
       | || ||||||||||||||||||||||||||||| |||| ||||    
T  1250525 tttacagagactaaaactggaattcgctaatattacaaggacgaaaa 1250571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 93 - 284
Target Start/End: Original strand, 25772522 - 25772710
Alignment:
Q  93 gagggaccaaaagtgggaggaatatgaaattacaaggacgtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaa 192  Q
    |||||||||||||||| |||||| ||||||||||||||||||||||||||||||| || ||||||||||||||||| |||||||||| ||||||||||||    
T  25772522 gagggaccaaaagtgg-aggaatctgaaattacaaggacgtaatttatgcagattctgttgacttgatgaaaggagggaccaaaagtagaagaatctgaa 25772620  T
Q  193 attatagatacataatctaaatatcnnnnnnnnaaagggactaaaactggaattcgctaatattacacggacaaaaaagaggtatttaccct 284  Q
    |||| ||  ||| ||||||||| |         | |||||||||||||||||||| ||||||||| | ||||  ||||||| ||||||||||    
T  25772621 attacagggacaaaatctaaatct-ttttttttacagggactaaaactggaattcactaatattatagggac-gaaaagagatatttaccct 25772710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 93 - 214
Target Start/End: Original strand, 48648420 - 48648540
Alignment:
Q  93 gagggaccaaaagtgggaggaatatgaaattacaaggacgtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaa 192  Q
    |||||||||||| ||| |||||| |||||||||| |||||||||||||||||||| || |||| |||||||||||| ||||| |||||||||||||| ||    
T  48648420 gagggaccaaaattgg-aggaatctgaaattacagggacgtaatttatgcagattctgttgacgtgatgaaaggagggaccagaagtggaagaatctaaa 48648518  T
Q  193 attatagatacataatctaaat 214  Q
    |||| | | ||| |||||||||    
T  48648519 attacatagacaaaatctaaat 48648540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 32 - 131
Target Start/End: Complemental strand, 24195045 - 24194941
Alignment:
Q  32 agcagaatctgcatatatgacacgtaaaatga-----gggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatgaaattaca 126  Q
    ||||||||||||||| |||| |||||||||||     |||||||||||||||| |||||||||||| |||||||||||||| ||||||| ||||||||||    
T  24195045 agcagaatctgcatacatgatacgtaaaatgaaatgagggaccaaaagtggaggaatctgaaattatagggaccaaaagtgagaggaatctgaaattaca 24194946  T
Q  127 aggac 131  Q
     ||||    
T  24194945 gggac 24194941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 139 - 284
Target Start/End: Complemental strand, 28218321 - 28218177
Alignment:
Q  139 atgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaatatcnnnnnnnnaaagggactaaaa 238  Q
    ||||||||| ||||||| || || || ||| ||||||||||||||||||||||||||| ||  ||| ||||||||| |         | |||||||||||    
T  28218321 atgcagattctgctgacgtggtggaatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcttttttttttacagggactaaaa 28218222  T
Q  239 ctggaattcgctaatattacacggacaaaaaagaggtatttaccct 284  Q
    | ||||||||||||||||||| ||||  ||||||||||||||||||    
T  28218221 ccggaattcgctaatattacagggac-gaaaagaggtatttaccct 28218177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 23 - 92
Target Start/End: Original strand, 25772483 - 25772552
Alignment:
Q  23 caccacgccagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaatta 92  Q
    |||||||  ||||||||||||||| |||  ||||||||||||||||||||||||||| ||||||||||||    
T  25772483 caccacgtaagcagaatctgcatacatggtacgtaaaatgagggaccaaaagtggaggaatctgaaatta 25772552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 35 - 99
Target Start/End: Original strand, 48648393 - 48648457
Alignment:
Q  35 agaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggac 99  Q
    |||||||||||| ||| ||||||||| |||||||||||| ||||| |||||||||||| ||||||    
T  48648393 agaatctgcatacatggcacgtaaaaggagggaccaaaattggaggaatctgaaattacagggac 48648457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 139 - 214
Target Start/End: Complemental strand, 7658113 - 7658038
Alignment:
Q  139 atgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaat 214  Q
    ||||||||||||||||| |||||||||||  ||||||||||| |||||| |||||||| |   |||||||||||||    
T  7658113 atgcagattttgctgacgtgatgaaaggatggaccaaaagtgtaagaatttgaaattacatggacataatctaaat 7658038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 138 - 283
Target Start/End: Complemental strand, 38879867 - 38879723
Alignment:
Q  138 tatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaatatcnnnnnnnnaaagggactaaa 237  Q
    |||||||||| |||| || || || || ||| |||||||||||||||||| |||||||| ||  ||| ||||||||| |         | ||| ||||||    
T  38879867 tatgcagattctgcttacgtggtggaatgagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatcttttttttttacaggaactaaa 38879768  T
Q  238 actggaattcgctaatattacacggacaaaaaagaggtatttaccc 283  Q
    | |||||||||||||||||||| ||||  |||||||||||||||||    
T  38879767 attggaattcgctaatattacagggac-gaaaagaggtatttaccc 38879723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 133 - 216
Target Start/End: Complemental strand, 16995347 - 16995264
Alignment:
Q  133 taatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaatat 216  Q
    ||||| ||||||||| ||||||| || || || | | ||||||||||||||||||||||||||| ||  ||| |||||||||||    
T  16995347 taattgatgcagattctgctgacgtggtggaatgtgggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatat 16995264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 138 - 284
Target Start/End: Original strand, 23704896 - 23705039
Alignment:
Q  138 tatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaatatcnnnnnnnnaaagggactaaa 237  Q
    |||||||||| |||| || || || || ||| |||||||||||||||||| |||||||| ||  ||| |||||||||  |        | ||||||||||    
T  23704896 tatgcagattctgcttacgtggtggaatgagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaat--cttttttttacagggactaaa 23704993  T
Q  238 actggaattcgctaatattacacggacaaaaaagaggtatttaccct 284  Q
    || |||||||||||||||||||  |||  ||||||||||||||||||    
T  23704994 accggaattcgctaatattacagagac-gaaaagaggtatttaccct 23705039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 138 - 284
Target Start/End: Complemental strand, 20458834 - 20458691
Alignment:
Q  138 tatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaatatcnnnnnnnnaaagggactaaa 237  Q
    |||||||||| |||| || || || || ||| ||||||||||||||||||||||||||| ||  ||| ||||||||| |         | ||||||||||    
T  20458834 tatgcagattctgcttacgtggtggaatgagggaccaaaagtggaagaatctgaaattacagcgacaaaatctaaattt--tttatttacagggactaaa 20458737  T
Q  238 actggaattcgctaatattacacggacaaaaaagaggtatttaccct 284  Q
    || |||||||| |||||||||| |||| ||||| | |||||||||||    
T  20458736 accggaattcgttaatattacagggacgaaaaa-atgtatttaccct 20458691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 284
Target Start/End: Complemental strand, 12006595 - 12006540
Alignment:
Q  228 agggactaaaactggaattcgctaatattacacggacaaaaaagaggtatttaccct 284  Q
    |||||||||||  ||||||||||||||||||| ||||  ||||||||||||||||||    
T  12006595 agggactaaaatcggaattcgctaatattacagggac-gaaaagaggtatttaccct 12006540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 138 - 214
Target Start/End: Complemental strand, 48672422 - 48672346
Alignment:
Q  138 tatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaat 214  Q
    |||||||||| ||||||| || || || ||| || |||||||||||||||||||||||| ||| ||  |||||||||    
T  48672422 tatgcagattctgctgacgtggtggaatgagggatcaaaagtggaagaatctgaaattacagagacgaaatctaaat 48672346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 138 - 284
Target Start/End: Original strand, 10409609 - 10409752
Alignment:
Q  138 tatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaatatcnnnnnnnnaaagggactaaa 237  Q
    |||||||||| |||| || || || || ||| || ||||||||||||||||| |||||| ||| ||| |||||||  |||        | ||||||||||    
T  10409609 tatgcagattctgctaacgtggtggaatgagggatcaaaagtggaagaatctaaaattacagagacaaaatctaa--atcttttttttacagggactaaa 10409706  T
Q  238 actggaattcgctaatattacacggacaaaaaagaggtatttaccct 284  Q
    |  ||||||||||||||||||| |||   ||||||||||||||||||    
T  10409707 atcggaattcgctaatattacatgga-tgaaaagaggtatttaccct 10409752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 228 - 283
Target Start/End: Complemental strand, 20419590 - 20419536
Alignment:
Q  228 agggactaaaactggaattcgctaatattacacggacaaaaaagaggtatttaccc 283  Q
    |||||||||||| ||||||||||||||||| | ||||  |||||||||||||||||    
T  20419590 agggactaaaaccggaattcgctaatattatagggac-gaaaagaggtatttaccc 20419536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 138 - 196
Target Start/End: Original strand, 24195031 - 24195089
Alignment:
Q  138 tatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaatta 196  Q
    |||||||||| |||| || ||||| || ||| |||||||||||||||||| ||||||||    
T  24195031 tatgcagattctgcttacgtgatggaatgagggaccaaaagtggaagaatatgaaatta 24195089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 138 - 196
Target Start/End: Complemental strand, 44816978 - 44816920
Alignment:
Q  138 tatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaatta 196  Q
    |||||||||| |||| || || || || ||| |||||||||||||||||||||||||||    
T  44816978 tatgcagattctgcttacgtggtggaatgagggaccaaaagtggaagaatctgaaatta 44816920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 284
Target Start/End: Complemental strand, 14795601 - 14795549
Alignment:
Q  231 gactaaaactggaattcgctaatattacacggacaaaaaagaggtatttaccct 284  Q
    |||||||||||||||||||| |||||||| |||| |||||| |||||| |||||    
T  14795601 gactaaaactggaattcgctcatattacaaggactaaaaag-ggtattaaccct 14795549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 284
Target Start/End: Complemental strand, 15242593 - 15242541
Alignment:
Q  231 gactaaaactggaattcgctaatattacacggacaaaaaagaggtatttaccct 284  Q
    |||||||||||||||||||| |||||||| |||| |||||| |||||| |||||    
T  15242593 gactaaaactggaattcgctcatattacaaggactaaaaag-ggtattaaccct 15242541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 283
Target Start/End: Complemental strand, 23704710 - 23704662
Alignment:
Q  234 taaaactggaattcgctaatattacacggacaaaaaagaggtatttaccc 283  Q
    |||||| ||||||||||||||||||| ||||  |||||||||||||||||    
T  23704710 taaaaccggaattcgctaatattacagggac-gaaaagaggtatttaccc 23704662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 228 - 284
Target Start/End: Original strand, 14646974 - 14647029
Alignment:
Q  228 agggactaaaactggaattcgctaatattacacggacaaaaaagaggtatttaccct 284  Q
    |||||||||||| |||||||||| |||||||| |||| |||||| |||||| |||||    
T  14646974 agggactaaaaccggaattcgctcatattacagggactaaaaag-ggtattaaccct 14647029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 159 - 199
Target Start/End: Complemental strand, 24195017 - 24194977
Alignment:
Q  159 atgaaaggagtgaccaaaagtggaagaatctgaaattatag 199  Q
    |||||| ||| ||||||||||||| ||||||||||||||||    
T  24195017 atgaaatgagggaccaaaagtggaggaatctgaaattatag 24194977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 59 - 99
Target Start/End: Complemental strand, 28218297 - 28218257
Alignment:
Q  59 aatgagggaccaaaagtggagtaatctgaaattagagggac 99  Q
    ||||||||||||||||||||  |||||||||||| ||||||    
T  28218297 aatgagggaccaaaagtggaagaatctgaaattacagggac 28218257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 231 - 283
Target Start/End: Original strand, 38880048 - 38880099
Alignment:
Q  231 gactaaaactggaattcgctaatattacacggacaaaaaagaggtatttaccc 283  Q
    ||||||||| |||||| |||||||||||| ||||  |||||||||||||||||    
T  38880048 gactaaaaccggaatttgctaatattacagggac-gaaaagaggtatttaccc 38880099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 231 - 282
Target Start/End: Complemental strand, 44816884 - 44816832
Alignment:
Q  231 gactaaaactggaattcgctaatattacacggac-aaaaaagaggtatttacc 282  Q
    ||||||||| | ||||||||||||||||| |||| | ||||||||||||||||    
T  44816884 gactaaaaccgaaattcgctaatattacagggacgagaaaagaggtatttacc 44816832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 59 - 99
Target Start/End: Complemental strand, 44816953 - 44816913
Alignment:
Q  59 aatgagggaccaaaagtggagtaatctgaaattagagggac 99  Q
    ||||||||||||||||||||  |||||||||||| ||||||    
T  44816953 aatgagggaccaaaagtggaagaatctgaaattacagggac 44816913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 138; Significance: 4e-72; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 23 - 284
Target Start/End: Complemental strand, 10108628 - 10108369
Alignment:
Q  23 caccacgccagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatgaaat 122  Q
    ||||||| |||||||||||||||| ||| |||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||| |||| ||||||    
T  10108628 caccacgtcagcagaatctgcatacatggcacgtaaaatgagggaccaaaagtggaggaatttgaaattacagggaccaaaagtgggacgaatctgaaat 10108529  T
Q  123 tacaaggacgtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaatatcnnnnn 222  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||| |||||||||||||||||| |||||||| ||  ||| ||||||||| |          
T  10108528 tacaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatct-ttttt 10108430  T
Q  223 nnnaaagggactaaaactggaattcgctaatattacacggacaaaaaagaggtatttaccct 284  Q
       | |||||||||||| ||||||||||||||||||| ||||  ||||||||||||||||||    
T  10108429 tttacagggactaaaaccggaattcgctaatattacagggac-gaaaagaggtatttaccct 10108369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 19 - 212
Target Start/End: Original strand, 42113100 - 42113293
Alignment:
Q  19 atttcaccacgccagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatg 118  Q
    ||||||||||| |||||||||||||||| ||||||| |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  42113100 atttcaccacgtcagcagaatctgcatacatgacacataaaatgagggaccaaaagtggagtaatatgaaattatagggaccaaaagtgggaggaatatg 42113199  T
Q  119 aaattacaaggacgtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaa 212  Q
    |||||||| |||| ||||||||||||| ||||||||| |||||||||||| || ||||||||||||||| |||||||| ||  |||||||||||    
T  42113200 aaattacagggacataatttatgcagaatttgctgacatgatgaaaggagggatcaaaagtggaagaatttgaaattaaagggacataatctaa 42113293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 23 - 196
Target Start/End: Original strand, 17623007 - 17623180
Alignment:
Q  23 caccacgccagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatgaaat 122  Q
    ||||||| ||||||||||||| || ||| |||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||| ||||||    
T  17623007 caccacgtcagcagaatctgcgtacatggcacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggaccaaaagtgggaggaatttgaaat 17623106  T
Q  123 tacaaggacgtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaatta 196  Q
    |||| |||| ||||||||||||||| ||||||| ||||||||||||||||||||||||||||||| ||||||||    
T  17623107 tacagggacataatttatgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatttgaaatta 17623180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 23 - 196
Target Start/End: Original strand, 21148057 - 21148229
Alignment:
Q  23 caccacgccagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatgaaat 122  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| ||| |||||||||||||||||| ||||||    
T  21148057 caccacgtcagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggaggaatttgaaattatagg-accaaaagtgggaggaatctgaaat 21148155  T
Q  123 tacaaggacgtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaatta 196  Q
    |||| |||||||||||||||||||| ||||||| |||||||||||| ||| |||||||||||||| ||||||||    
T  21148156 tacagggacgtaatttatgcagattctgctgacatgatgaaaggagggactaaaagtggaagaatatgaaatta 21148229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 19 - 284
Target Start/End: Original strand, 30789623 - 30789886
Alignment:
Q  19 atttcaccacgccagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatg 118  Q
    |||||||||||  |||| |||||||||| ||| ||||||| |||||||| ||||||||||| |||||||||||| | |||||||||||||||||||||||    
T  30789623 atttcaccacgttagcaaaatctgcatacatggcacgtaagatgagggatcaaaagtggaggaatctgaaattacaaggaccaaaagtgggaggaatatg 30789722  T
Q  119 aaattacaaggacgtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaatatcn 218  Q
    ||||||||||||||||||| ||||||||||||||||| |||||||| ||  ||||||||||||||||||||||||||| ||  ||| ||||||||| |      
T  30789723 aaattacaaggacgtaattgatgcagattttgctgacgtgatgaaacgatggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatct-t 30789821  T
Q  219 nnnnnnnaaagggactaaaactggaattcgctaatattacacggacaaaaaagaggtatttaccct 284  Q
           | |||||||||||| ||||||  ||||||||||| ||||  ||||||||||||||||||    
T  30789822 tttatttacagggactaaaaccggaatttactaatattacagggac-gaaaagaggtatttaccct 30789886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 23 - 196
Target Start/End: Complemental strand, 7689781 - 7689608
Alignment:
Q  23 caccacgccagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatgaaat 122  Q
    ||||||| |||||||||||||||| ||| |||||||||||||||| ||||||||||| |||||||||||| |||||| ||||||||||||||| ||||||    
T  7689781 caccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaattacagggactaaaagtgggaggaatctgaaat 7689682  T
Q  123 tacaaggacgtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaatta 196  Q
    ||||||||||||||| ||||||||||||| ||  |||||||| ||| |||||||||||||||||||||||||||    
T  7689681 tacaaggacgtaattgatgcagattttgccgatgtgatgaaaagagggaccaaaagtggaagaatctgaaatta 7689608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 31 - 189
Target Start/End: Original strand, 43851792 - 43851950
Alignment:
Q  31 cagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatgaaattacaagga 130  Q
    |||||||||||||||| |||||||||||||||||||| ||||||||||| ||| |||||||| |||||||||||||||||||||| ||||||||||||||    
T  43851792 cagcagaatctgcatacatgacacgtaaaatgagggatcaaaagtggaggaatatgaaattacagggaccaaaagtgggaggaatctgaaattacaagga 43851891  T
Q  131 cgtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatct 189  Q
    ||||||| ||||| ||||||||||| |||||||||||| ||| ||||||||||||||||    
T  43851892 cgtaattgatgcaaattttgctgacgtgatgaaaggagggacaaaaagtggaagaatct 43851950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 23 - 196
Target Start/End: Original strand, 14767627 - 14767800
Alignment:
Q  23 caccacgccagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatgaaat 122  Q
    ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||| ||| |||||||| |||||||||||||||||||||| ||||||    
T  14767627 caccacgtcagcagaatctgcatatatgacacgtaaaatgagagaccaaaagtggaggaatttgaaattacagggaccaaaagtgggaggaatctgaaat 14767726  T
Q  123 tacaaggacgtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaatta 196  Q
    |||| |||||||||||||||||||| || |||| |||||||| ||| |||  ||| ||||||||| ||||||||    
T  14767727 tacagggacgtaatttatgcagattctgttgacgtgatgaaaagagggacacaaactggaagaatatgaaatta 14767800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 23 - 284
Target Start/End: Complemental strand, 26136943 - 26136684
Alignment:
Q  23 caccacgccagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatgaaat 122  Q
    |||||||  ||||||||||||||| ||| |||||||||||||||||||||| ||||| ||||||||| || | |||||||||||||||| ||| ||||||    
T  26136943 caccacgtaagcagaatctgcatacatggcacgtaaaatgagggaccaaaaatggaggaatctgaaagtacaaggaccaaaagtgggagaaatctgaaat 26136844  T
Q  123 tacaaggacgtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaatatcnnnnn 222  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||  | ||||| |||||||||||||||||| |   ||| ||||||||| |          
T  26136843 tacagggacgtaatttatgcagattatgctgacttgatgaaaggaggaatcaaaattggaagaatctgaaattacaaggacaaaatctaaat-ttttttt 26136745  T
Q  223 nnnaaagggactaaaactggaattcgctaatattacacggacaaaaaagaggtatttaccct 284  Q
       | |||||||||||||||||||||||||||||||| |||   |||||||||||| |||||    
T  26136744 tttacagggactaaaactggaattcgctaatattaca-ggaacgaaaagaggtattcaccct 26136684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 31 - 284
Target Start/End: Complemental strand, 5555119 - 5554868
Alignment:
Q  31 cagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatgaaattacaagga 130  Q
    ||||| |||||||||| ||| ||||||||||||||||||||||||| || |||  ||||||| ||||||||||| | |||||||| ||||||| || |||    
T  5555119 cagcaaaatctgcataaatggcacgtaaaatgagggaccaaaagtgaaggaattcgaaattacagggaccaaaactaggaggaatctgaaattccaggga 5555020  T
Q  131 cgtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaatatcnnnnnnnnaaagg 230  Q
    ||||||||||||||||| ||||||| ||||||||| || |||||||||||||||||| |||||||||||  ||| ||||| ||| |         | |||    
T  5555019 cgtaatttatgcagattctgctgacgtgatgaaagaagggaccaaaagtggaagaatatgaaattatagggacaaaatctgaatct-ttttttttacagg 5554921  T
Q  231 gactaaaactggaattcgctaatattacacggacaaaaaagaggtatttaccct 284  Q
    ||||||||| ||||||||||||||||||| ||||  ||||||||||||||||||    
T  5554920 gactaaaaccggaattcgctaatattacagggac-gaaaagaggtatttaccct 5554868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 23 - 283
Target Start/End: Complemental strand, 14820552 - 14820295
Alignment:
Q  23 caccacgccagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatgaaat 122  Q
    ||||||| |||||||||||||||| ||||| |||||||||||||||||||||| ||| ||| ||| ||||  |||| ||||| | |||| ||| ||||||    
T  14820552 caccacgtcagcagaatctgcatacatgactcgtaaaatgagggaccaaaagtagaggaatttgagattacggggagcaaaactaggagaaatctgaaat 14820453  T
Q  123 tacaaggacgtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaatatcnnnnn 222  Q
    |||| |||||||||||||||||||| ||||||  |||||||||||| |||||||||||||||||| |||||||| ||  ||| |||||||  |||         
T  14820452 tacagggacgtaatttatgcagattctgctgatgtgatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatctaa--atcttttt 14820355  T
Q  223 nnnaaagggactaaaactggaattcgctaatattacacggacaaaaaagaggtatttaccc 283  Q
       | ||| |||||||| ||||||||||||||||||| ||||  |||||||||||||||||    
T  14820354 tttacaggaactaaaaccggaattcgctaatattacagggac-gaaaagaggtatttaccc 14820295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 31 - 214
Target Start/End: Complemental strand, 2583570 - 2583387
Alignment:
Q  31 cagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatgaaattacaagga 130  Q
    |||| ||||||||||| ||| || |||||||||||||| |||||||||| ||| |||||||| ||||||||||||| |||||||| |||||||||| |||    
T  2583570 cagccgaatctgcatacatggcatgtaaaatgagggactaaaagtggaggaatttgaaattacagggaccaaaagtaggaggaatctgaaattacaggga 2583471  T
Q  131 cgtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaat 214  Q
    ||||||||||||||||| ||||||| |||||||||||| || ||||||| |||||||| ||||||| ||  ||| |||||||||    
T  2583470 cgtaatttatgcagattctgctgacgtgatgaaaggagggatcaaaagtagaagaatccgaaattacagggacaaaatctaaat 2583387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 23 - 196
Target Start/End: Complemental strand, 22494642 - 22494470
Alignment:
Q  23 caccacgccagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatgaaat 122  Q
    |||||||  |||||||| |||||| |||||||||||||||||||||||||||||||| ||||||||||||  |||||||||||| |||||||| | ||||    
T  22494642 caccacgtaagcagaatttgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattactgggaccaaaagtaggaggaatctaaaat 22494543  T
Q  123 tacaaggacgtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaatta 196  Q
    |||| |||||||||||||||||||| ||||||| |||| |||| || |||||||| ||||||||| ||||||||    
T  22494542 tacagggacgtaatttatgcagattctgctgacgtgattaaagaag-gaccaaaaatggaagaatatgaaatta 22494470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 23 - 196
Target Start/End: Complemental strand, 42606011 - 42605838
Alignment:
Q  23 caccacgccagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatgaaat 122  Q
    |||||||  |||||||| |||||  ||| |||||||||||||||||||||||||||| |||||||||||| || ||||||||| ||||||||| ||||||    
T  42606011 caccacgtaagcagaatttgcattcatggcacgtaaaatgagggaccaaaagtggaggaatctgaaattacagcgaccaaaagcgggaggaatttgaaat 42605912  T
Q  123 tacaaggacgtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaatta 196  Q
    |||| |||||||||||||||| ||| | ||||| |||| ||||||| |||||||||||||||||| ||||||||    
T  42605911 tacagggacgtaatttatgcatattctactgacgtgattaaaggagggaccaaaagtggaagaatatgaaatta 42605838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 23 - 196
Target Start/End: Original strand, 43481434 - 43481607
Alignment:
Q  23 caccacgccagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatgaaat 122  Q
    |||||||| || ||||| |||||| ||| ||||||||| |||||| ||||||||||| ||||| |||||| |  |||||| ||  |||||||| ||||||    
T  43481434 caccacgcaagtagaatttgcatacatggcacgtaaaacgagggatcaaaagtggaggaatctaaaattacaaagaccaagagcaggaggaatctgaaat 43481533  T
Q  123 tacaaggacgtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaatta 196  Q
    ||||||||||||||||||||||||| ||||||| |||| ||||||  |||||| ||||||||||| ||||||||    
T  43481534 tacaaggacgtaatttatgcagattgtgctgacgtgattaaaggaaagaccaagagtggaagaatttgaaatta 43481607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 23 - 140
Target Start/End: Original strand, 26532903 - 26533020
Alignment:
Q  23 caccacgccagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatgaaat 122  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||  |||||||||| |||||||||||| ||| |||||||||| ||||| | ||||||    
T  26532903 caccacgtcagcagaatctgcatacatgacacgtaaaatgagggattaaaagtggaggaatctgaaattataggaaccaaaagtgtgaggagtttgaaat 26533002  T
Q  123 tacaaggacgtaatttat 140  Q
    |||||||| |||||||||    
T  26533003 tacaaggatgtaatttat 26533020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 138 - 284
Target Start/End: Complemental strand, 21148080 - 21147935
Alignment:
Q  138 tatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaatatcnnnnnnnnaaagggactaaa 237  Q
    |||||||||| ||||||| || || ||  || ||||||||||||||||||||||||||| ||  ||| ||||||||| |         | ||||||||||    
T  21148080 tatgcagattctgctgacgtggtggaataagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcttttttttttacagggactaaa 21147981  T
Q  238 actggaattcgctaatattacacggacaaaaaagaggtatttaccct 284  Q
    || ||||||||||||||||||| |||| ||||||||||||| |||||    
T  21147980 accggaattcgctaatattacagggac-aaaaagaggtattaaccct 21147935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 141 - 284
Target Start/End: Complemental strand, 17623027 - 17622889
Alignment:
Q  141 gcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaatatcnnnnnnnnaaagggactaaaact 240  Q
    ||||||| ||||||| || || || ||| |||||||||||||||||||| |||||| ||| ||| ||||||||| |         | |||||||||||||    
T  17623027 gcagattctgctgacgtggtggaatgagggaccaaaagtggaagaatctaaaattacaga-acaaaatctaaatct---ttttttacagggactaaaact 17622932  T
Q  241 ggaattcgctaatattacacggacaaaaaagaggtatttaccct 284  Q
    | ||||||||||||||||| ||||  ||||||||||||||||||    
T  17622931 gaaattcgctaatattacaaggac-gaaaagaggtatttaccct 17622889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 138 - 283
Target Start/End: Complemental strand, 43851807 - 43851665
Alignment:
Q  138 tatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaatatcnnnnnnnnaaagggactaaa 237  Q
    |||||||||| ||||||  || || || ||| || |||||||||||||||||||||||| ||  ||| |||||||||  |        | ||||||||||    
T  43851807 tatgcagattctgctgatgtggtggaatgagggatcaaaagtggaagaatctgaaattacagggacaaaatctaaat--cttttgtttacagggactaaa 43851710  T
Q  238 actggaattcgctaatattacacggacaaaaaagaggtatttaccc 283  Q
    || ||||||||||||||||||| ||||  |||||||||||||||||    
T  43851709 accggaattcgctaatattacagggac-gaaaagaggtatttaccc 43851665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 138 - 214
Target Start/End: Complemental strand, 30789650 - 30789574
Alignment:
Q  138 tatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaat 214  Q
    ||||||||||||||| || || ||||| ||| || |||||||||| ||||||||||||| ||| ||| |||||||||    
T  30789650 tatgcagattttgctaacgtggtgaaatgagggatcaaaagtggaggaatctgaaattacagagacaaaatctaaat 30789574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 138 - 214
Target Start/End: Complemental strand, 42113127 - 42113051
Alignment:
Q  138 tatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaat 214  Q
    |||||||||| ||||||| || ||||| ||| ||||||||||| |||||||| |||||| ||  |||||||||||||    
T  42113127 tatgcagattctgctgacgtggtgaaatgagggaccaaaagtgaaagaatcttaaattacagggacataatctaaat 42113051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 135 - 214
Target Start/End: Original strand, 5555101 - 5555180
Alignment:
Q  135 atttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaat 214  Q
    ||||||||||||||||||||| || || ||  || |||||||||||||||||| |||||||| ||  ||| |||||||||    
T  5555101 atttatgcagattttgctgacatggtggaataagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaat 5555180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 138 - 289
Target Start/End: Original strand, 14820529 - 14820678
Alignment:
Q  138 tatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaatatcnnnnnnnnaaagggactaaa 237  Q
    |||||||||| ||||||| || || ||  || |||||||||||||||||| |||||||| ||  ||| ||||||||| |         | ||||||||||    
T  14820529 tatgcagattctgctgacgtggtggaataagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatct-ttttttttacagggactaaa 14820627  T
Q  238 actggaattcgctaatattacacggacaaaaaagaggtatttaccctctatt 289  Q
    || ||||||||||||||||||| ||||  |||||||||||| ||||| ||||    
T  14820628 accggaattcgctaatattacagggac-taaaagaggtattaaccctttatt 14820678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 231 - 293
Target Start/End: Original strand, 42606080 - 42606141
Alignment:
Q  231 gactaaaactggaattcgctaatattacacggacaaaaaagaggtatttaccctctatttttc 293  Q
    |||||||||  |||||||||||||||||| |||| |||||||| |||||||||| ||||||||    
T  42606080 gactaaaaccagaattcgctaatattacagggac-aaaaagagatatttaccctatatttttc 42606141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 143 - 284
Target Start/End: Original strand, 10171383 - 10171522
Alignment:
Q  143 agattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaatatcnnnnnnnnaaagggactaaaactgg 242  Q
    ||||| ||||||| ||||| || ||| ||||||||||| |||||||| |||||| ||  ||| ||||||||||          | |||||||||||| ||    
T  10171383 agattctgctgacatgatggaatgagggaccaaaagtgaaagaatctaaaattacagggacaaaatctaaatag-ttttttttacagggactaaaaccgg 10171481  T
Q  243 aattcgctaatattacacggacaaaaaagaggtatttaccct 284  Q
    ||||||||||||||||| ||||  ||||| ||||||||||||    
T  10171482 aattcgctaatattacagggac-gaaaagcggtatttaccct 10171522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 230 - 283
Target Start/End: Original strand, 18044153 - 18044205
Alignment:
Q  230 ggactaaaactggaattcgctaatattacacggacaaaaaagaggtatttaccc 283  Q
    |||||||||| ||||||||||||||||||| ||||  |||||||||||||||||    
T  18044153 ggactaaaaccggaattcgctaatattacagggac-gaaaagaggtatttaccc 18044205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 119 - 196
Target Start/End: Original strand, 21144721 - 21144798
Alignment:
Q  119 aaattacaaggacgtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaatta 196  Q
    |||||||| |||||||||||||||||||| ||||||| || | |||  || ||| |||| |||| |||||||||||||    
T  21144721 aaattacagggacgtaatttatgcagattctgctgacgtggttaaataagggacgaaaaatggaggaatctgaaatta 21144798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 228 - 269
Target Start/End: Original strand, 40487738 - 40487779
Alignment:
Q  228 agggactaaaactggaattcgctaatattacacggacaaaaa 269  Q
    |||||||||||||||||||||||||||||||| |||| ||||    
T  40487738 agggactaaaactggaattcgctaatattacaaggaccaaaa 40487779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 138 - 196
Target Start/End: Original strand, 7689758 - 7689816
Alignment:
Q  138 tatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaatta 196  Q
    |||||||||| ||||||| || || || ||| || ||||||||||||||||||||||||    
T  7689758 tatgcagattctgctgacgtggtggaatgagggatcaaaagtggaagaatctgaaatta 7689816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 284
Target Start/End: Original strand, 7689849 - 7689902
Alignment:
Q  230 ggactaaaactggaattcgctaatattacacggacaaaaaagaggtatttaccct 284  Q
    |||||||||  ||||||||||||||||||| ||||  ||||||||||||||||||    
T  7689849 ggactaaaatcggaattcgctaatattacagggac-gaaaagaggtatttaccct 7689902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 138 - 284
Target Start/End: Original strand, 10108605 - 10108749
Alignment:
Q  138 tatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaatatcnnnnnnnnaaagggactaaa 237  Q
    |||||||||| ||||||| || || ||  || |||||||||||||||||| |||||||| ||  ||| ||||||||| |         | ||||||||||    
T  10108605 tatgcagattctgctgacgtggtggaataagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatct-ttttttttacagggactaaa 10108703  T
Q  238 actggaattcgctaatattacacggacaaaaaagaggtatttaccct 284  Q
    || |||||| |||||||||||| ||||  |||||||||||| |||||    
T  10108704 accggaatttgctaatattacagggac-gaaaagaggtattaaccct 10108749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 125
Target Start/End: Original strand, 22848451 - 22848540
Alignment:
Q  35 agaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatgaaattac 125  Q
    |||||||||||| ||| ||||| |||||||| |  |||| ||||| ||| |||||||| || |||||||||||  | ||||||||||||||    
T  22848451 agaatctgcataaatggcacgtgaaatgagg-ataaaaaatggaggaatttgaaattacagagaccaaaagtgaaaagaatatgaaattac 22848540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 138 - 196
Target Start/End: Original strand, 26136920 - 26136978
Alignment:
Q  138 tatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaatta 196  Q
    |||||||||| |||| || || || || ||| |||||||||||||||||||||||||||    
T  26136920 tatgcagattctgcttacgtggtggaatgagggaccaaaagtggaagaatctgaaatta 26136978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 284
Target Start/End: Original strand, 2583588 - 2583700
Alignment:
Q  171 accaaaagtggaagaatctgaaattatagatacataatctaaatatcnnnnnnnnaaagggactaaaactggaattcgctaatattacacggacaaaaaa 270  Q
    |||||||||||||||||||||||||||||  ||| ||| ||||| |         | |||| |||||||| |||||||||||||||||  ||||  ||||    
T  2583588 accaaaagtggaagaatctgaaattatagggacaaaatttaaatcttttttttttacagggcctaaaactagaattcgctaatattacgaggac-gaaaa 2583686  T
Q  271 gaggtatttaccct 284  Q
    ||| ||||||||||    
T  2583687 gagatatttaccct 2583700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 138 - 214
Target Start/End: Complemental strand, 14767650 - 14767574
Alignment:
Q  138 tatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaat 214  Q
    |||||||||| ||||||| || || ||  || |||||||||||||| |||||||||||| ||  ||| |||||||||    
T  14767650 tatgcagattctgctgacgtggtggaataagggaccaaaagtggaaaaatctgaaattacagggacaaaatctaaat 14767574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 228 - 284
Target Start/End: Original strand, 20877069 - 20877124
Alignment:
Q  228 agggactaaaactggaattcgctaatattacacggacaaaaaagaggtatttaccct 284  Q
    |||||||||||| |||||||||| |||||||| ||||  |||||||||||| |||||    
T  20877069 agggactaaaaccggaattcgctcatattacagggac-caaaagaggtattaaccct 20877124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 228 - 284
Target Start/End: Original strand, 21148260 - 21148315
Alignment:
Q  228 agggactaaaactggaattcgctaatattacacggacaaaaaagaggtatttaccct 284  Q
    |||||||||||| ||||||| |||||||||||  |||  ||||||||||||||||||    
T  21148260 agggactaaaaccggaattcactaatattacagagac-gaaaagaggtatttaccct 21148315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 59 - 99
Target Start/End: Original strand, 26136945 - 26136985
Alignment:
Q  59 aatgagggaccaaaagtggagtaatctgaaattagagggac 99  Q
    ||||||||||||||||||||  |||||||||||| ||||||    
T  26136945 aatgagggaccaaaagtggaagaatctgaaattacagggac 26136985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 228 - 284
Target Start/End: Original strand, 26137008 - 26137063
Alignment:
Q  228 agggactaaaactggaattcgctaatattacacggacaaaaaagaggtatttaccct 284  Q
    |||||||||||||| ||||| ||||||||||| ||||  ||||| ||||||||||||    
T  26137008 agggactaaaactgaaattcactaatattacagggac-gaaaagtggtatttaccct 26137063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 228 - 284
Target Start/End: Complemental strand, 35367464 - 35367409
Alignment:
Q  228 agggactaaaactggaattcgctaatattacacggacaaaaaagaggtatttaccct 284  Q
    ||||| |||||| |||||||||||||||| || ||||  ||||||||||||||||||    
T  35367464 agggattaaaaccggaattcgctaatattgcagggac-caaaagaggtatttaccct 35367409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 39889629 - 39889673
Alignment:
Q  170 gaccaaaagtggaagaatctgaaattatagatacataatctaaat 214  Q
    |||||||||||||||||||||||||  |||  |||||||||||||    
T  39889629 gaccaaaagtggaagaatctgaaatggtagggacataatctaaat 39889673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 135; Significance: 3e-70; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 19 - 284
Target Start/End: Complemental strand, 24467889 - 24467628
Alignment:
Q  19 atttcaccacgccagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatg 118  Q
    ||||||||||| ||| |||||||||||| ||| |||||||||||||| |||||| ||||||||||||||||||| |||||||||||||||||||||||||    
T  24467889 atttcaccacgtcagtagaatctgcatacatggcacgtaaaatgagg-accaaatgtggagtaatctgaaattacagggaccaaaagtgggaggaatatg 24467791  T
Q  119 aaattacaaggacgtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaatatcn 218  Q
    ||||||||| ||||||||||||||||||| |  ||||||||||||||||| ||||||||||||||||||||||||||| ||  ||| |||||||  |||     
T  24467790 aaattacaatgacgtaatttatgcagattctaatgacttgatgaaaggagggaccaaaagtggaagaatctgaaattacagggacaaaatctaa--atct 24467693  T
Q  219 nnnnnnnaaagggactaaaactggaattcgctaatattacacggacaaaaaagaggtatttaccct 284  Q
           | ||||||||||| |||||||||||||||||||| ||||  |||||| |||||||||||    
T  24467692 tttttttacagggactaaaattggaattcgctaatattacagggac-gaaaagatgtatttaccct 24467628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 19 - 284
Target Start/End: Complemental strand, 18462546 - 18462285
Alignment:
Q  19 atttcaccacgccagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatg 118  Q
    ||||||||||| || ||||||||||||| ||| |||| ||||||||| |||||| |||||||||| |||||||| |||||||||||||||||||||||||    
T  18462546 atttcaccacgtcaacagaatctgcatacatggcacgcaaaatgagg-accaaacgtggagtaatatgaaattatagggaccaaaagtgggaggaatatg 18462448  T
Q  119 aaattacaaggacgtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaatatcn 218  Q
    ||||||||| ||||||||||||||||||| |  ||||||||||||||||| |||||||| |||||||||||||||||| ||  ||| |||||||  |||     
T  18462447 aaattacaatgacgtaatttatgcagattctaatgacttgatgaaaggagggaccaaaaatggaagaatctgaaattacagggacaaaatctaa--atct 18462350  T
Q  219 nnnnnnnaaagggactaaaactggaattcgctaatattacacggacaaaaaagaggtatttaccct 284  Q
           | |||||||||||| ||||||||||||||||||| ||||  ||||||||||||||||||    
T  18462349 tttttttacagggactaaaaccggaattcgctaatattacagggac-gaaaagaggtatttaccct 18462285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 19 - 214
Target Start/End: Original strand, 52058127 - 52058319
Alignment:
Q  19 atttcaccacgccagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatg 118  Q
    ||||||||||  |||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||| | |||||||||||||||||||| ||    
T  52058127 atttcaccacatcagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggagtaatatgaaattacaaggaccaaaagtgggaggaatctg 52058226  T
Q  119 aaattacaaggacgtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaat 214  Q
    |||| | | ||||||||||||||||||||   ||||| |||||||||||| ||||||||||||||||||||||||||| ||  |||||||||||||    
T  52058227 aaatcatagggacgtaatttatgcagatt---ctgacgtgatgaaaggagggaccaaaagtggaagaatctgaaattacagggacataatctaaat 52058319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 23 - 196
Target Start/End: Complemental strand, 39711330 - 39711157
Alignment:
Q  23 caccacgccagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatgaaat 122  Q
    |||||||  |||||||| |||||| ||| |||||||||||||||||||||||||||| |||| ||||||| |||||||||||| ||||||||||||||||    
T  39711330 caccacgtaagcagaatttgcatacatggcacgtaaaatgagggaccaaaagtggaggaatccgaaattacagggaccaaaagcgggaggaatatgaaat 39711231  T
Q  123 tacaaggacgtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaatta 196  Q
    ||||||||||||||||||||||||| ||||||| |||| ||||||| |||||||||||||||||| ||||||||    
T  39711230 tacaaggacgtaatttatgcagattctgctgacgtgattaaaggagggaccaaaagtggaagaatatgaaatta 39711157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 23 - 259
Target Start/End: Original strand, 4907082 - 4907317
Alignment:
Q  23 caccacgccagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatgaaat 122  Q
    ||||||| |||| ||||||||||| ||| || |||||||||||||| |||||||||  |||||||||||| ||||||||||||| |||||||| ||||||    
T  4907082 caccacgtcagccgaatctgcatacatggcatgtaaaatgagggactaaaagtggatgaatctgaaattacagggaccaaaagtaggaggaatctgaaat 4907181  T
Q  123 tacaaggacgtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaatatcnnnnn 222  Q
    |||| |||||||||||||||||||| | ||||| |||||||||||| ||||||||||||||||||||||||||| ||  ||| ||||||||| |          
T  4907182 tacagggacgtaatttatgcagattctactgacgtgatgaaaggagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatct-tttat 4907280  T
Q  223 nnnaaagggactaaaactggaattcgctaatattaca 259  Q
       | ||||||||||||||||||||||||||||||||    
T  4907281 tttacagggactaaaactggaattcgctaatattaca 4907317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 23 - 214
Target Start/End: Complemental strand, 17606566 - 17606375
Alignment:
Q  23 caccacgccagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatgaaat 122  Q
    ||||||| ||||| ||| |||||| ||| |||||||||||||||||||||||||||| ||| |||||||| |||||||||||||||||||||||||||||    
T  17606566 caccacgtcagcaaaatttgcatacatggcacgtaaaatgagggaccaaaagtggaggaatttgaaattacagggaccaaaagtgggaggaatatgaaat 17606467  T
Q  123 tacaaggacgtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaat 214  Q
    |||| ||||||||||||| |||||| ||||||| |||||||| ||| |||||||||||||||||| |||||||| ||  ||| |||||||||    
T  17606466 tacagggacgtaatttatacagattctgctgacgtgatgaaatgagggaccaaaagtggaagaatatgaaattacaggaacaaaatctaaat 17606375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 19 - 214
Target Start/End: Complemental strand, 48072223 - 48072028
Alignment:
Q  19 atttcaccacgccagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatg 118  Q
    ||||||||||| |||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||||||| ||||| |||||||||||||||| ||    
T  48072223 atttcaccacgtcagcagaatctgcatacatgtcacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggatcaaaagtgggaggaatttg 48072124  T
Q  119 aaattacaaggacgtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaat 214  Q
    |||||||| |||||||||||||||| ||| ||||||  |||||||||||| || ||||||||||| ||| |||||||| ||  ||| |||||||||    
T  48072123 aaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggagggagcaaaagtggaataatatgaaattacagggacaaaatctaaat 48072028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 23 - 196
Target Start/End: Complemental strand, 13229989 - 13229817
Alignment:
Q  23 caccacgccagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatgaaat 122  Q
    |||||||  ||||||||||||||| |||||||| ||||||||||||||||||||||| |||||||||||| ||| |||||||||| ||||||| ||||||    
T  13229989 caccacgtaagcagaatctgcatacatgacacgcaaaatgagggaccaaaagtggaggaatctgaaattacagg-accaaaagtgagaggaatctgaaat 13229891  T
Q  123 tacaaggacgtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaatta 196  Q
    |||| |||||||||||||||||||| || |||||||||||||||||||| ||||||||||||||| ||||||||    
T  13229890 tacagggacgtaatttatgcagattatgttgacttgatgaaaggagtgatcaaaagtggaagaatatgaaatta 13229817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 32 - 284
Target Start/End: Original strand, 33628819 - 33629069
Alignment:
Q  32 agcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatgaaattacaaggac 131  Q
    |||||||| |||||| ||| |||||||||||||||||||||||| ||| |||||||||||| |||||||||||| ||||||||| |||||||||| ||||    
T  33628819 agcagaatttgcatacatggcacgtaaaatgagggaccaaaagtagaggaatctgaaattacagggaccaaaagcgggaggaatttgaaattacagggac 33628918  T
Q  132 gtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaatatcnnnnnnnnaaaggg 231  Q
     ||||||||| ||||| ||||||| |||| ||||||| ||||||||||||||||||||||||||| ||  ||| |||| |||| |         | ||||    
T  33628919 ataatttatgtagattctgctgacgtgattaaaggagggaccaaaagtggaagaatctgaaattacagggacaaaatc-aaattttttttttttacaggg 33629017  T
Q  232 actaaaactggaattcgctaatattacacggacaaaaaagaggtatttaccct 284  Q
    |||||||| ||||||||||||||||||| |||| ||||||||||||| |||||    
T  33629018 actaaaaccggaattcgctaatattacagggac-aaaaagaggtattaaccct 33629069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 23 - 283
Target Start/End: Original strand, 39826170 - 39826424
Alignment:
Q  23 caccacgccagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatgaaat 122  Q
    |||||||  ||||||||||||||| ||| |||||||||||||||| ||||||||||| ||| |||||||| ||||| |||||||||||||||| | ||||    
T  39826170 caccacgttagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatatgaaattacagggatcaaaagtgggaggaatctaaaat 39826269  T
Q  123 tacaaggacgtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaatatcnnnnn 222  Q
    ||||||||||||||| ||||||||||||||||| |||||||||    ||||||||||||||||||||||||||| ||  ||| ||||||||| |          
T  39826270 tacaaggacgtaattgatgcagattttgctgacgtgatgaaag----gaccaaaagtggaagaatctgaaattacagggacaaaatctaaatct-tttta 39826364  T
Q  223 nnnaaagggactaaaactggaattcgctaatattacacggacaaaaaagaggtatttaccc 283  Q
       | |||||||||||| | ||||||||||||||||| ||||  |||||||||||||||||    
T  39826365 tttacagggactaaaaccgaaattcgctaatattacatggac-gaaaagaggtatttaccc 39826424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 19 - 199
Target Start/End: Original strand, 42510130 - 42510310
Alignment:
Q  19 atttcaccacgccagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatg 118  Q
    ||||||||||  |||||||||||||||| ||| ||||| |||||||||||||||||||||| |||||||||||| |||||||||||||||||||||| ||    
T  42510130 atttcaccacatcagcagaatctgcatacatggcacgtgaaatgagggaccaaaagtggaggaatctgaaattacagggaccaaaagtgggaggaatctg 42510229  T
Q  119 aaattacaaggacgtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatag 199  Q
    |||||||| ||  |||||||||||||||| ||||||| |||||||| ||| ||  | ||||||||||||||||||||||||    
T  42510230 aaattacaggggtgtaatttatgcagattctgctgacgtgatgaaatgagggaatacaagtggaagaatctgaaattatag 42510310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 23 - 214
Target Start/End: Complemental strand, 43539605 - 43539414
Alignment:
Q  23 caccacgccagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatgaaat 122  Q
    ||||||| |||| ||||||||||| |||||||||||||||||| ||||||||||||| ||| |||||||| ||||| |||||||||||||||| | ||||    
T  43539605 caccacgtcagccgaatctgcatacatgacacgtaaaatgaggtaccaaaagtggaggaatttgaaattacagggagcaaaagtgggaggaatctaaaat 43539506  T
Q  123 tacaaggacgtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaat 214  Q
    |||| |||||||||||||||||||| ||||||| |||||||||||| |||||||||||||| ||| | |||||| ||  ||| |||||||||    
T  43539505 tacagggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtggaacaatataaaattacagggacaaaatctaaat 43539414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 35 - 214
Target Start/End: Complemental strand, 30299477 - 30299298
Alignment:
Q  35 agaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatgaaattacaaggacgta 134  Q
    |||||||||||| ||| ||| |||||||||||||||||||||||| |||||||||||| | | || ||||||||||||||| |||||||||| |||||||    
T  30299477 agaatctgcatacatggcacataaaatgagggaccaaaagtggaggaatctgaaattacaagaactaaaagtgggaggaatctgaaattacagggacgta 30299378  T
Q  135 atttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaat 214  Q
    ||||||| ||||| || ||||||||||||||||| |||||||||||||||||| |||||||| ||  ||| |||||||||    
T  30299377 atttatggagattctgttgacttgatgaaaggagagaccaaaagtggaagaatatgaaattacagggacaaaatctaaat 30299298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 23 - 196
Target Start/End: Complemental strand, 20995926 - 20995754
Alignment:
Q  23 caccacgccagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatgaaat 122  Q
    ||||||| |||||||||||||||| ||| |||||||| ||||||||||||||||||| ||| |||||||| |||||| ||||||||||||||| ||||||    
T  20995926 caccacgtcagcagaatctgcatacatggcacgtaaa-tgagggaccaaaagtggagaaatttgaaattacagggacgaaaagtgggaggaatctgaaat 20995828  T
Q  123 tacaaggacgtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaatta 196  Q
    |||| |||||||||||||||||||| ||||||| ||||||||| || ||||||||||| |||||| | ||||||    
T  20995827 tacagggacgtaatttatgcagattctgctgacgtgatgaaagaagggaccaaaagtgaaagaatataaaatta 20995754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 52 - 284
Target Start/End: Complemental strand, 29696792 - 29696564
Alignment:
Q  52 cacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatgaaattacaaggacgtaatttatgcagattttgc 151  Q
    |||||||||||||||||||||||||||| ||||||||| || |||||||||| |||||||||||||||||||| | |||| ||||||||||||||| |||    
T  29696792 cacgtaaaatgagggaccaaaagtggaggaatctgaaaatacagggaccaaa-gtgggaggaatatgaaattatagggacataatttatgcagattctgc 29696694  T
Q  152 tgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaatatcnnnnnnnnaaagggactaaaactggaattcgcta 251  Q
     ||  |||||||||||||||| |||||||||||||| ||||||||  |  ||| |||||||  |||        | || ||||||||| | |||||||||    
T  29696693 cgatgtgatgaaaggagtgacaaaaagtggaagaatatgaaattacggggacaaaatctaa--atcttttttttacagagactaaaaccgaaattcgcta 29696596  T
Q  252 atattacacggacaaaaaagaggtatttaccct 284  Q
    |||||||| ||||  ||||||||||||||||||    
T  29696595 atattacagggac-gaaaagaggtatttaccct 29696564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 23 - 283
Target Start/End: Original strand, 39970766 - 39971024
Alignment:
Q  23 caccacgccagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatgaaat 122  Q
    ||||||| ||||| |||||||||| ||| |||||||||||||||||||||||||||  |||||||||||| | | |||||||||||||||||| | ||||    
T  39970766 caccacgtcagcaaaatctgcatacatggcacgtaaaatgagggaccaaaagtggatgaatctgaaattacatg-accaaaagtgggaggaatctaaaat 39970864  T
Q  123 tacaaggacgtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaatatcnnnnn 222  Q
    | || ||||  ||||||||| |||| ||||||| ||||||||| || ||||||||||||||| |||| |||||| ||  ||| ||||||||| |          
T  39970865 ttcagggacacaatttatgcggattctgctgacgtgatgaaagaagggaccaaaagtggaaggatctaaaattacagggacaaaatctaaatcttttttt 39970964  T
Q  223 nnnaaagggactaaaactggaattcgctaatattacacggacaaaaaagaggtatttaccc 283  Q
       | |||||||||||| | |||||| |||||||||| ||||  |||||||||||||||||    
T  39970965 tttacagggactaaaaccgaaattcgttaatattacatggac-gaaaagaggtatttaccc 39971024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 31 - 195
Target Start/End: Complemental strand, 8293057 - 8292890
Alignment:
Q  31 cagcagaatctgcatatatgacacgtaaaatgagggaccaa---aagtggagtaatctgaaattagagggaccaaaagtgggaggaatatgaaattacaa 127  Q
    |||| ||||||||||| ||| || | |||||||||||| ||   |||||||| ||||| |||||| | ||||||||||| |||||||| ||||||||||     
T  8293057 cagccgaatctgcatacatggcatgaaaaatgagggactaattaaagtggaggaatctaaaattacatggaccaaaagtaggaggaatctgaaattacag 8292958  T
Q  128 ggacgtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaatt 195  Q
    |||||||||||||||||||| ||||||| |||||||| |||  ||||||||||||||||| |||||||    
T  8292957 ggacgtaatttatgcagattctgctgacgtgatgaaaagaggaaccaaaagtggaagaatatgaaatt 8292890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 93 - 196
Target Start/End: Original strand, 34749296 - 34749398
Alignment:
Q  93 gagggaccaaaagtgggaggaatatgaaattacaaggacgtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaa 192  Q
    |||||||||||||||| |||||| |||||||||| ||| |||||||||||||||| ||||||| |||| |||||||  ||||||||||||||||||||||    
T  34749296 gagggaccaaaagtgg-aggaatctgaaattacagggatgtaatttatgcagattctgctgacgtgattaaaggaggtaccaaaagtggaagaatctgaa 34749394  T
Q  193 atta 196  Q
    ||||    
T  34749395 atta 34749398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 35 - 150
Target Start/End: Original strand, 215044 - 215159
Alignment:
Q  35 agaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatgaaattacaaggacgta 134  Q
    |||||||||||||||||||||| ||||||  |||||||||||||| ||||| |||||| | ||||| |||||| ||| ||| ||||||||||| ||||||    
T  215044 agaatctgcatatatgacacgtgaaatgaatgaccaaaagtggaggaatcttaaattacacggaccgaaagtgagagaaatctgaaattacaatgacgta 215143  T
Q  135 atttatgcagattttg 150  Q
    |||||| || ||||||    
T  215144 atttatacaaattttg 215159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 19 - 152
Target Start/End: Original strand, 7473908 - 7474037
Alignment:
Q  19 atttcaccacgccagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatg 118  Q
    ||||||||||| ||  |||||||||||| ||| ||||| |||||| ||| ||||||||||| |||||||||||| | ||||||||||||||||||   ||    
T  7473908 atttcaccacgtcaaaagaatctgcatacatggcacgtgaaatgatggatcaaaagtggaggaatctgaaattacaaggaccaaaagtgggagga--ctg 7474005  T
Q  119 aaattacaaggacgtaatttatgcagattttgct 152  Q
    |||||  | |||  ||||||||||||||||||||    
T  7474006 aaatt--agggatataatttatgcagattttgct 7474037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 23 - 98
Target Start/End: Original strand, 34749257 - 34749332
Alignment:
Q  23 caccacgccagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagaggga 98  Q
    |||||||  |||||||| |||||| ||| || ||||||||||||||||||||||||| |||||||||||| |||||    
T  34749257 caccacgtaagcagaatttgcatacatggcatgtaaaatgagggaccaaaagtggaggaatctgaaattacaggga 34749332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 138 - 214
Target Start/End: Complemental strand, 39970789 - 39970713
Alignment:
Q  138 tatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaat 214  Q
    |||||||||||||||||| || || || ||| ||||||||||||||||||||||||||| | | ||| |||||||||    
T  39970789 tatgcagattttgctgacgtggtggaatgagggaccaaaagtggaagaatctgaaattacatagacaaaatctaaat 39970713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 93 - 196
Target Start/End: Original strand, 16294137 - 16294240
Alignment:
Q  93 gagggaccaaaagtgggaggaatatgaaattacaaggacgtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaa 192  Q
    ||||||||||||||||  |||||   |||||||| |||||||||||||| ||||| ||||||| || | |||  || ||||||||||||| |||| ||||    
T  16294137 gagggaccaaaagtggatggaatcataaattacagggacgtaatttatgtagattctgctgacatggttaaataagggaccaaaagtggaggaatatgaa 16294236  T
Q  193 atta 196  Q
    ||||    
T  16294237 atta 16294240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 109 - 195
Target Start/End: Original strand, 30780270 - 30780356
Alignment:
Q  109 gaggaatatgaaattacaaggacgtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaatt 195  Q
    ||||||||||||||||||| |||||||||||| |||||| ||||||| ||||  || ||  || |||||||||| |||| |||||||    
T  30780270 gaggaatatgaaattacaatgacgtaatttatacagattctgctgacgtgattgaatgaaggatcaaaagtggaggaatatgaaatt 30780356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 138 - 214
Target Start/End: Original strand, 24467862 - 24467938
Alignment:
Q  138 tatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaat 214  Q
    |||||||||| | ||||| || ||||| ||| ||||||||||||||||||||||||||| ||  ||| |||||||||    
T  24467862 tatgcagattctactgacgtggtgaaatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaat 24467938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 138 - 214
Target Start/End: Complemental strand, 52058154 - 52058078
Alignment:
Q  138 tatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaat 214  Q
    |||||||||| ||||||  || ||||| ||| ||||||||||||||||||||||||||| ||  ||||| |||||||    
T  52058154 tatgcagattctgctgatgtggtgaaatgagggaccaaaagtggaagaatctgaaattacagggacatagtctaaat 52058078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 138 - 284
Target Start/End: Original strand, 20995903 - 20996046
Alignment:
Q  138 tatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaatatcnnnnnnnnaaagggactaaa 237  Q
    |||||||||| ||||||| || || ||  || |||||||||||||||||| |||||||| ||| ||| |||||||  |||        | | ||||||||    
T  20995903 tatgcagattctgctgacgtggtggaataagggaccaaaagtggaagaatatgaaattacagagacaaaatctaa--atcttttttttacatggactaaa 20996000  T
Q  238 actggaattcgctaatattacacggacaaaaaagaggtatttaccct 284  Q
    |||  ||||||||||||||||| |||| ||||||||||||| |||||    
T  20996001 actaaaattcgctaatattacagggac-aaaaagaggtattaaccct 20996046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 138 - 284
Target Start/End: Original strand, 8293042 - 8293187
Alignment:
Q  138 tatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaatatcnnnnnnnnaaagggactaaa 237  Q
    ||||||||||  |||||| || || || ||| |||||||||||||||||| |||||||| ||  ||| ||||||||| |         | ||||||||||    
T  8293042 tatgcagattcggctgacatggtggaatgagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatcttttttttttacagggactaaa 8293141  T
Q  238 actggaattcgctaatattacacggacaaaaaagaggtatttaccct 284  Q
    ||| ||||||| |||||||| | ||||  ||||||||||||||||||    
T  8293142 actagaattcgttaatattatagggac-gaaaagaggtatttaccct 8293187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 138 - 284
Target Start/End: Original strand, 17606543 - 17606685
Alignment:
Q  138 tatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaatatcnnnnnnnnaaagggactaaa 237  Q
    |||||| ||||||||||| || || ||  || ||||||||||||||||||||||||||| |   ||| ||||||||| |         | ||||||||||    
T  17606543 tatgcaaattttgctgacgtggtggaataagggaccaaaagtggaagaatctgaaattacaaggacaaaatctaaatct---ttttttacagggactaaa 17606639  T
Q  238 actggaattcgctaatattacacggacaaaaaagaggtatttaccct 284  Q
    || ||||||||||||||||||| ||||  |||||||||||| |||||    
T  17606640 accggaattcgctaatattacagggac-gaaaagaggtattaaccct 17606685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 138 - 196
Target Start/End: Original strand, 18462519 - 18462577
Alignment:
Q  138 tatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaatta 196  Q
    |||||||||| || |||| || ||||| ||| |||||||||||||||||||||||||||    
T  18462519 tatgcagattctgttgacgtggtgaaatgagagaccaaaagtggaagaatctgaaatta 18462577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 138 - 216
Target Start/End: Original strand, 48072196 - 48072274
Alignment:
Q  138 tatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaatat 216  Q
    |||||||||| ||||||| || ||||| |||   |||||||||||||||| |||||||| ||  |||||||||||||||    
T  48072196 tatgcagattctgctgacgtggtgaaatgaggacccaaaagtggaagaatatgaaattacagggacataatctaaatat 48072274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 138 - 211
Target Start/End: Complemental strand, 7473935 - 7473862
Alignment:
Q  138 tatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatcta 211  Q
    |||||||||| |  |||| || ||||| ||| |||||||||||||||||| |||||||| ||| ||||||||||    
T  7473935 tatgcagattcttttgacgtggtgaaatgagggaccaaaagtggaagaatatgaaattacagagacataatcta 7473862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 284
Target Start/End: Complemental strand, 4907016 - 4906961
Alignment:
Q  228 agggactaaaactggaattcgctaatattacacggacaaaaaagaggtatttaccct 284  Q
    ||||||||||||| |||||| ||||||||||| ||||  ||||||||||||||||||    
T  4907016 agggactaaaactagaattcactaatattacagggac-gaaaagaggtatttaccct 4906961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 284
Target Start/End: Original strand, 39711396 - 39711451
Alignment:
Q  228 agggactaaaactggaattcgctaatattacacggacaaaaaagaggtatttaccct 284  Q
    ||||||||||||  |||||||||||||||||| ||||  ||||||||||||||||||    
T  39711396 agggactaaaaccagaattcgctaatattacagggac-gaaaagaggtatttaccct 39711451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 228 - 283
Target Start/End: Original strand, 18342341 - 18342395
Alignment:
Q  228 agggactaaaactggaattcgctaatattacacggacaaaaaagaggtatttaccc 283  Q
    |||||||||||| | ||||||||||||||||| |||| ||||| ||||||||||||    
T  18342341 agggactaaaaccgaaattcgctaatattacagggacgaaaaa-aggtatttaccc 18342395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 228 - 290
Target Start/End: Original strand, 30252222 - 30252285
Alignment:
Q  228 agggactaaaactggaattcgctaatattacacggacaa-aaaagaggtatttaccctctattt 290  Q
    ||||||||||||  |||||||||||||||| | ||||||  ||||||||||||||||| |||||    
T  30252222 agggactaaaaccagaattcgctaatattatagggacaaggaaagaggtatttaccctatattt 30252285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 229 - 284
Target Start/End: Complemental strand, 33628743 - 33628689
Alignment:
Q  229 gggactaaaactggaattcgctaatattacacggacaaaaaagaggtatttaccct 284  Q
    |||||||||||  |||||||||||||||||| ||||  ||||||||||||||||||    
T  33628743 gggactaaaaccagaattcgctaatattacagggac-gaaaagaggtatttaccct 33628689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 94 - 131
Target Start/End: Original strand, 16294211 - 16294247
Alignment:
Q  94 agggaccaaaagtgggaggaatatgaaattacaaggac 131  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  16294211 agggaccaaaagtgg-aggaatatgaaattacaaggac 16294247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 269
Target Start/End: Original strand, 17502053 - 17502094
Alignment:
Q  228 agggactaaaactggaattcgctaatattacacggacaaaaa 269  Q
    |||||||||||| ||||||||||||||||||| |||| ||||    
T  17502053 agggactaaaaccggaattcgctaatattacaaggaccaaaa 17502094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 99
Target Start/End: Original strand, 24467886 - 24467927
Alignment:
Q  58 aaatgagggaccaaaagtggagtaatctgaaattagagggac 99  Q
    |||||||||||||||||||||  |||||||||||| ||||||    
T  24467886 aaatgagggaccaaaagtggaagaatctgaaattacagggac 24467927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 139 - 196
Target Start/End: Original strand, 29696794 - 29696851
Alignment:
Q  139 atgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaatta 196  Q
    ||||||||| |||| || || || || ||| |||||||||||||||||||||||||||    
T  29696794 atgcagattctgcttacgtggtggaatgagggaccaaaagtggaagaatctgaaatta 29696851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 99
Target Start/End: Complemental strand, 52058130 - 52058089
Alignment:
Q  58 aaatgagggaccaaaagtggagtaatctgaaattagagggac 99  Q
    |||||||||||||||||||||  |||||||||||| ||||||    
T  52058130 aaatgagggaccaaaagtggaagaatctgaaattacagggac 52058089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 138 - 214
Target Start/End: Complemental strand, 4907105 - 4907029
Alignment:
Q  138 tatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaat 214  Q
    ||||||||||  |||||| || || || ||| |||||||||||||||||| |||||||| ||  ||| |||||||||    
T  4907105 tatgcagattcggctgacgtggtggaatgagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaat 4907029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 228 - 280
Target Start/End: Complemental strand, 17606358 - 17606307
Alignment:
Q  228 agggactaaaactggaattcgctaatattacacggacaaaaaagaggtattta 280  Q
    |||||||||||  ||||||||||||||||||| ||||  ||||||||||||||    
T  17606358 agggactaaaatcggaattcgctaatattacagggac-gaaaagaggtattta 17606307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 228 - 284
Target Start/End: Complemental strand, 20995752 - 20995697
Alignment:
Q  228 agggactaaaactggaattcgctaatattacacggacaaaaaagaggtatttaccct 284  Q
    |||||||||||| |||||||||||||||||||  ||   ||||||||||||||||||    
T  20995752 agggactaaaaccggaattcgctaatattacagaga-tgaaaagaggtatttaccct 20995697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 138 - 214
Target Start/End: Complemental strand, 39826193 - 39826117
Alignment:
Q  138 tatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaat 214  Q
    |||||||||| |||| || || || || ||| || |||||||||||||||||||||||| ||  ||| |||||||||    
T  39826193 tatgcagattctgctaacgtggtggaatgagggatcaaaagtggaagaatctgaaattacagggacaaaatctaaat 39826117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 138 - 214
Target Start/End: Complemental strand, 42510157 - 42510081
Alignment:
Q  138 tatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaat 214  Q
    |||||||||| ||||||  || ||||| ||| ||| |||||||||||||| |||||||| ||  ||| |||||||||    
T  42510157 tatgcagattctgctgatgtggtgaaatgagggactaaaagtggaagaatatgaaattacagggacaaaatctaaat 42510081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 134; Significance: 1e-69; HSPs: 47)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 23 - 280
Target Start/End: Complemental strand, 3018270 - 3018014
Alignment:
Q  23 caccacgccagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatgaaat 122  Q
    ||||||| ||||| |||||||||| |||||||||||||||||||||||||||||||| ||| |||||||| |||||||||||||||||||||| ||||||    
T  3018270 caccacgtcagcataatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatttgaaattatagggaccaaaagtgggaggaatgtgaaat 3018171  T
Q  123 tacaaggacgtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaatatcnnnnn 222  Q
    ||||||| ||||||||||||||||| ||||||| |||||||||||| |||||||||||||||||| |||||||| ||  ||| ||||||||| |          
T  3018170 tacaaggccgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatcttttttt 3018071  T
Q  223 nnnaaagggactaaaactggaattcgctaatattacacggacaaaaaagaggtattta 280  Q
       |  ||||||||||| ||||||||||||||||||| ||||  ||||||||||||||    
T  3018070 tttaccgggactaaaaccggaattcgctaatattacagggac-gaaaagaggtattta 3018014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 23 - 214
Target Start/End: Original strand, 9516730 - 9516921
Alignment:
Q  23 caccacgccagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatgaaat 122  Q
    |||||||  ||||||||||||||| |||| ||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||| ||||||    
T  9516730 caccacgtaagcagaatctgcatacatgatacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggaccaaaagtgggaggaatctgaaat 9516829  T
Q  123 tacaaggacgtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaat 214  Q
    ||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||| |||||||||||||||| ||  ||| |||||||||    
T  9516830 tacaaggacgtaatttatgtagattttgttgacttgatgaaaggagggaccaaaagtagaagaatctgaaattacagggacaaaatctaaat 9516921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 19 - 214
Target Start/End: Original strand, 13132057 - 13132252
Alignment:
Q  19 atttcaccacgccagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatg 118  Q
    ||||||||||| |||||||||||||||| ||||||||||||||||||| | ||||||||||||||||||||||| | |||||||||||||||| ||||||    
T  13132057 atttcaccacgtcagcagaatctgcatacatgacacgtaaaatgaggggctaaaagtggagtaatctgaaattacatggaccaaaagtgggagaaatatg 13132156  T
Q  119 aaattacaaggacgtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaat 214  Q
    ||||||||||||||||||||||||||||| |||||| |||||||||| || |||||||||||||||||| |||||||| ||  ||| |||||||||    
T  13132157 aaattacaaggacgtaatttatgcagattctgctgatttgatgaaagaagggaccaaaagtggaagaatatgaaattacagggacagaatctaaat 13132252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 35 - 284
Target Start/End: Original strand, 46046556 - 46046802
Alignment:
Q  35 agaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatgaaattacaaggacgta 134  Q
    |||||||||||| ||| |||||||||||||||| ||||||||||| |||||||||||| |||||||||||||||||||||| ||||||||||||||||||    
T  46046556 agaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaattacagggaccaaaagtgggaggaatctgaaattacaaggacgta 46046655  T
Q  135 atttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaatatcnnnnnnnnaaagggact 234  Q
    ||| ||||||||||||||||| |||||||||||| || |||||||||||||||||||||||| ||  ||| ||||||||| |         | |||||||    
T  46046656 attgatgcagattttgctgacgtgatgaaaggagggatcaaaagtggaagaatctgaaattacagggacaaaatctaaatct-ttttatttacagggact 46046754  T
Q  235 aaaactggaattcgctaatattacacggacaaaaaagaggtatttaccct 284  Q
    ||||| ||||||||||||||||||| |||| ||||  |||||||||||||    
T  46046755 aaaaccggaattcgctaatattacagggacgaaaa--aggtatttaccct 46046802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 23 - 284
Target Start/End: Original strand, 37012827 - 37013085
Alignment:
Q  23 caccacgccagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatgaaat 122  Q
    ||||||| |||||||||||||||| ||| |||||||||||||||||||||||||||| ||| |||||||| | ||||||||||| ||| |||||||||||    
T  37012827 caccacgtcagcagaatctgcatacatggcacgtaaaatgagggaccaaaagtggaggaatttgaaattacaaggaccaaaagtaggaagaatatgaaat 37012926  T
Q  123 tacaaggacgtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaatatcnnnnn 222  Q
    |||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||| ||  ||| ||||||| | |          
T  37012927 tacagggacgtaatttatgcagattttgctgacgtgatgaaaggagtgaccaaaagtggaagaatatgaaattacagggacaaaatctaatttt--tttt 37013024  T
Q  223 nnnaaagggactaaaactggaattcgctaatattacacggacaaaaaagaggtatttaccct 284  Q
       | ||||||||||||  |||||||||||||||||| ||||  ||| ||||||||||||||    
T  37013025 tatacagggactaaaaccagaattcgctaatattacagggac-gaaatgaggtatttaccct 37013085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 26 - 214
Target Start/End: Complemental strand, 9396954 - 9396766
Alignment:
Q  26 cacgccagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatgaaattac 125  Q
    |||| |||||||||||||||| |||||||||||||||||||||||||||||||| ||| |||||||| ||||| |||||||||||||||| |||||||||    
T  9396954 cacgtcagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatatgaaattacagggatcaaaagtgggaggaatctgaaattac 9396855  T
Q  126 aaggacgtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaat 214  Q
    | |||||||||||||||||||| ||||||| |||||||||||| |||||||||||||| ||| |||||||||||  ||| |||||||||    
T  9396854 agggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtggaaaaatttgaaattatagggacaaaatctaaat 9396766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 19 - 196
Target Start/End: Complemental strand, 3273882 - 3273707
Alignment:
Q  19 atttcaccacgccagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatg 118  Q
    ||||||||||| ||| |||||||||||| ||| |||||||||||||| |||||| ||||||||||||||||||| ||| |||||||||||||||||||||    
T  3273882 atttcaccacgtcagtagaatctgcatacatggcacgtaaaatgagg-accaaacgtggagtaatctgaaattacagg-accaaaagtgggaggaatatg 3273785  T
Q  119 aaattacaaggacgtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaatta 196  Q
    ||||||||||||||||||||||||||||| |  ||||||||||||||||| |||||||||||||||||| ||||||||    
T  3273784 aaattacaaggacgtaatttatgcagattctaatgacttgatgaaaggagggaccaaaagtggaagaatatgaaatta 3273707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 23 - 214
Target Start/End: Complemental strand, 7819272 - 7819081
Alignment:
Q  23 caccacgccagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatgaaat 122  Q
    ||||||| |||||||||||||||| ||| |||||||||||||||||||||||||||| ||| |||||||| | |||||||||||||||||||| ||||||    
T  7819272 caccacgtcagcagaatctgcatacatggcacgtaaaatgagggaccaaaagtggaggaatatgaaattacatggaccaaaagtgggaggaatctgaaat 7819173  T
Q  123 tacaaggacgtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaat 214  Q
    |||| |||||||||| ||||||||||| || || ||||||||||||  |||||||||||||||||||||||||| ||  ||| |||||||||    
T  7819172 tacatggacgtaattgatgcagattttactaacgtgatgaaaggaggaaccaaaagtggaagaatctgaaattacagggacaaaatctaaat 7819081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 31 - 214
Target Start/End: Original strand, 34064110 - 34064293
Alignment:
Q  31 cagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatgaaattacaagga 130  Q
    |||| |||||| |||| ||| || |||||||||||||| |||||||||| |||||||||||| ||||||||||||| |||||||| ||||||||||||||    
T  34064110 cagccgaatctacatacatggcatgtaaaatgagggactaaaagtggaggaatctgaaattacagggaccaaaagtaggaggaatctgaaattacaagga 34064209  T
Q  131 cgtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaat 214  Q
    ||||||||||||||||| ||||||| ||||||||| || ||||||||||||||||||||||||||| ||| ||| |||||||||    
T  34064210 cgtaatttatgcagattctgctgacgtgatgaaagaagggaccaaaagtggaagaatctgaaattacagagacaaaatctaaat 34064293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 23 - 213
Target Start/End: Complemental strand, 4356139 - 4355949
Alignment:
Q  23 caccacgccagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatgaaat 122  Q
    ||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| ||| |||||||| | ||||||||||| |||||||| ||||||    
T  4356139 caccacgtcagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatttgaaattacaaggaccaaaagtaggaggaatctgaaat 4356040  T
Q  123 tacaaggacgtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaa 213  Q
    ||||||||||||||||||||||||| |||| || |||||||| ||| ||||||||||| |||||| |||||||| | | ||| ||||||||    
T  4356039 tacaaggacgtaatttatgcagattctgctaacgtgatgaaatgagggaccaaaagtgaaagaatatgaaattacatagacaaaatctaaa 4355949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 23 - 280
Target Start/End: Original strand, 38574088 - 38574343
Alignment:
Q  23 caccacgccagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatgaaat 122  Q
    ||||||| |||||||||||||||| ||| || ||||||||||||||||||||||||| ||| |||||||| || ||||||||||||||||||| ||||||    
T  38574088 caccacgtcagcagaatctgcatacatggcatgtaaaatgagggaccaaaagtggaggaatatgaaattacagagaccaaaagtgggaggaatctgaaat 38574187  T
Q  123 tacaaggacgtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaatatcnnnnn 222  Q
    |||| ||||| |||| |||||||||||| |||| |||||||||||| |||||||||||||||||| |||||||| ||  ||| ||||||||| |          
T  38574188 tacagggacgcaattgatgcagattttgttgacgtgatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatct-tttta 38574286  T
Q  223 nnnaaagggactaaaactggaattcgctaatattacacggacaaaaaagaggtattta 280  Q
       | ||||||||||||  |||||||||||||||||| |||| ||||| |||||||||    
T  38574287 tttacagggactaaaaccagaattcgctaatattacagggacgaaaaa-aggtattta 38574343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 19 - 214
Target Start/End: Complemental strand, 15640977 - 15640782
Alignment:
Q  19 atttcaccacgccagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatg 118  Q
    ||||||||||| ||||||||| |||||| |||||||||||||||| ||||||||||||||| |||||||||||| | ||| |||||||||||||||| ||    
T  15640977 atttcaccacgtcagcagaatatgcatacatgacacgtaaaatgatggaccaaaagtggaggaatctgaaattacaaggatcaaaagtgggaggaatctg 15640878  T
Q  119 aaattacaaggacgtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaat 214  Q
    |||||||| |||||||||||||||| ||| ||||||  |||||||||||| ||||||||||| |||||| |||||||| ||  ||| |||||||||    
T  15640877 aaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacaaaatctaaat 15640782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 23 - 269
Target Start/End: Complemental strand, 9619237 - 9618993
Alignment:
Q  23 caccacgccagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatgaaat 122  Q
    |||||||  ||||||||||| |||  || ||||||||| |||||| ||||||||||| |||||||||||| ||||||||||| |||||||||||||||||    
T  9619237 caccacgtaagcagaatctgtatacctggcacgtaaaaagagggagcaaaagtggaggaatctgaaattacagggaccaaaaatgggaggaatatgaaat 9619138  T
Q  123 tacaaggacgtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaatatcnnnnn 222  Q
    |||| |||||| ||||||||||||| || ||||||||||||||||| ||||||||||||||||||||||||||| ||  ||| ||||||||| |          
T  9619137 tacagggacgt-atttatgcagattctgttgacttgatgaaaggagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatct-ttgtt 9619040  T
Q  223 nnnaaagggactaaaactggaattcgctaatattacacggacaaaaa 269  Q
       | |||||||||||| ||||||||||||||||||| |||| ||||    
T  9619039 tttacagggactaaaaccggaattcgctaatattacatggacgaaaa 9618993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 23 - 269
Target Start/End: Complemental strand, 31944208 - 31943962
Alignment:
Q  23 caccacgccagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatgaaat 122  Q
    ||||||| || |||||||||||||  || |||||||||||||||||||||||||||| |||||||||||| | |||||||||||||||||||| ||||||    
T  31944208 caccacgtcaacagaatctgcatacttggcacgtaaaatgagggaccaaaagtggaggaatctgaaattacatggaccaaaagtgggaggaatctgaaat 31944109  T
Q  123 tacaaggacgtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaatatcnnnnn 222  Q
    |||| |||| ||||| |||||| ||||| |||| |||||||||||| |||||||||||||||||| |||||||| ||  ||| ||||||||| |          
T  31944108 tacatggacataattgatgcaggttttgttgacgtgatgaaaggagagaccaaaagtggaagaatatgaaattacagggacaaaatctaaatctttttta 31944009  T
Q  223 nnnaaagggactaaaactggaattcgctaatattacacggacaaaaa 269  Q
       | ||| |||||||| ||||||||||||||||||| |||| ||||    
T  31944008 tttacaggaactaaaaccggaattcgctaatattacagggacgaaaa 31943962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 23 - 195
Target Start/End: Complemental strand, 18667547 - 18667375
Alignment:
Q  23 caccacgccagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatgaaat 122  Q
    ||||||| ||| |||||||||||| ||| |||||||||||||||||||||||||||| ||| | |||||| ||||||||||||| |||||||| ||||||    
T  18667547 caccacgtcagtagaatctgcatacatggcacgtaaaatgagggaccaaaagtggaggaatttaaaattacagggaccaaaagttggaggaatctgaaat 18667448  T
Q  123 tacaaggacgtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaatt 195  Q
    |||| ||||||||||||||||||||||| |||| |||||||||||| |||||||||||||| ||| |||||||    
T  18667447 tacagggacgtaatttatgcagattttgttgacgtgatgaaaggagggaccaaaagtggaacaatatgaaatt 18667375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 23 - 214
Target Start/End: Original strand, 48579986 - 48580177
Alignment:
Q  23 caccacgccagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatgaaat 122  Q
    ||||||| ||||||||||| |||| ||| |||||||||||||||| ||||||||||| ||| ||||||||||| ||||||||||||||||||| ||||||    
T  48579986 caccacgtcagcagaatctacatacatggcacgtaaaatgagggagcaaaagtggaggaatttgaaattagagagaccaaaagtgggaggaatttgaaat 48580085  T
Q  123 tacaaggacgtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaat 214  Q
    ||||||||||||||||||||| ||| |||| |  |||||||||||| |||||||||||||| ||| |||||||| ||  ||| |||||||||    
T  48580086 tacaaggacgtaatttatgcatattctgctaaggtgatgaaaggagggaccaaaagtggaacaatatgaaattacagggacaaaatctaaat 48580177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 23 - 196
Target Start/End: Original strand, 31090181 - 31090354
Alignment:
Q  23 caccacgccagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatgaaat 122  Q
    |||||||  |||||||| |||||| |||  ||||||||||| ||||||||||||||| ||||||||||||  ||||||||||||||||| ||| ||||||    
T  31090181 caccacgtaagcagaatttgcatacatggtacgtaaaatgaaggaccaaaagtggaggaatctgaaattacggggaccaaaagtgggagaaatctgaaat 31090280  T
Q  123 tacaaggacgtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaatta 196  Q
    ||||||||||||||||||| ||||| |  ||||||||||||||||| |||||||||| ||||||||||||||||    
T  31090281 tacaaggacgtaatttatgtagattctattgacttgatgaaaggagggaccaaaagtagaagaatctgaaatta 31090354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 23 - 214
Target Start/End: Complemental strand, 18713218 - 18713027
Alignment:
Q  23 caccacgccagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatgaaat 122  Q
    ||||||| ||||||||||| |||| ||   ||||||| ||||||||||||||| ||| ||| |||||||| | |||||||||| ||||||||| ||||||    
T  18713218 caccacgtcagcagaatctacatacattgaacgtaaactgagggaccaaaagttgaggaatttgaaattacatggaccaaaagagggaggaatctgaaat 18713119  T
Q  123 tacaaggacgtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaat 214  Q
    |||| |||||||||||||||||||||||||||| |||||||||||| |||||||| ||||| ||| |||||||| ||  ||| |||||||||    
T  18713118 tacagggacgtaatttatgcagattttgctgacgtgatgaaaggagggaccaaaattggaacaatatgaaattacagggacaaaatctaaat 18713027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 93 - 196
Target Start/End: Complemental strand, 26252456 - 26252353
Alignment:
Q  93 gagggaccaaaagtgggaggaatatgaaattacaaggacgtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaa 192  Q
    ||||||||||||||||||||||| |||||||||| |||||||||||||||||||| || ||||||||||||||||| |||||||||||||||||||||||    
T  26252456 gagggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattctgttgacttgatgaaaggagggaccaaaagtggaagaatctgaa 26252357  T
Q  193 atta 196  Q
    ||||    
T  26252356 atta 26252353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 93 - 282
Target Start/End: Complemental strand, 35376347 - 35376164
Alignment:
Q  93 gagggaccaaaagtgggaggaatatgaaattacaaggacgtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaa 192  Q
    ||||||||||||||||||||||| ||   ||||| |||| |||||||||| |||| ||||||| |||||||||||| |||||||||||||||||||| ||    
T  35376347 gagggaccaaaagtgggaggaatctg---ttacatggacttaatttatgcggattctgctgacgtgatgaaaggagagaccaaaagtggaagaatctaaa 35376251  T
Q  193 attatagatacataatctaaatatcnnnnnnnnaaagggactaaaactggaattcgctaatattacacggacaaaaaagaggtatttacc 282  Q
    |||| ||| ||| |||||||  |||        | ||||||||||||  |||||||||||||||||| ||||  |||| |||||||||||    
T  35376250 attacagagacaaaatctaa--atcttttttttacagggactaaaaccagaattcgctaatattacagggac-gaaaataggtatttacc 35376164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 26 - 131
Target Start/End: Complemental strand, 48260006 - 48259901
Alignment:
Q  26 cacgccagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatgaaattac 125  Q
    |||| ||||| |||||||||| ||| |||||||||||||||| ||||||||||| |||||||||| | ||||||||||||| |||||||| |||||||||    
T  48260006 cacgtcagcataatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaataacagggaccaaaagtaggaggaatctgaaattac 48259907  T
Q  126 aaggac 131  Q
    | ||||    
T  48259906 atggac 48259901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 117 - 196
Target Start/End: Original strand, 41947070 - 41947149
Alignment:
Q  117 tgaaattacaaggacgtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaatta 196  Q
    |||||||||| |||||||||||||||||||| || |||||| ||||||| || |||||||||||||| ||| ||||||||    
T  41947070 tgaaattacagggacgtaatttatgcagattctgttgactttatgaaagcagggaccaaaagtggaaaaatatgaaatta 41947149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 32 - 99
Target Start/End: Complemental strand, 26252486 - 26252418
Alignment:
Q  32 agcagaatctgcatatatgacacgtaaaatgagggaccaaaagt-ggagtaatctgaaattagagggac 99  Q
    ||||||||||||||| ||| |||||||||||||||||||||||| |||| |||||||||||| ||||||    
T  26252486 agcagaatctgcatacatggcacgtaaaatgagggaccaaaagtgggaggaatctgaaattacagggac 26252418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 138 - 280
Target Start/End: Complemental strand, 13132084 - 13131943
Alignment:
Q  138 tatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaatatcnnnnnnnnaaagggactaaa 237  Q
    |||||||||| ||||||| || ||||| ||| || |||||||||||||||||||||||| |   ||||||||||||| |         | ||||||||||    
T  13132084 tatgcagattctgctgacgtggtgaaatgagggatcaaaagtggaagaatctgaaattacatgaacataatctaaatcttttttttttacagggactaaa 13131985  T
Q  238 actggaattcgctaatattacacggacaaaaaagaggtattta 280  Q
    || | |||||| |||||||||| ||||  ||||||||||||||    
T  13131984 acagaaattcgttaatattacaaggac-gaaaagaggtattta 13131943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 23 - 77
Target Start/End: Complemental strand, 35376386 - 35376332
Alignment:
Q  23 caccacgccagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtgg 77  Q
    ||||||| ||||| |||||| ||| ||||||||||||||||||||||||||||||    
T  35376386 caccacgtcagcaaaatctgtatacatgacacgtaaaatgagggaccaaaagtgg 35376332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 228 - 289
Target Start/End: Original strand, 31218305 - 31218365
Alignment:
Q  228 agggactaaaactggaattcgctaatattacacggacaaaaaagaggtatttaccctctatt 289  Q
    |||||||||||| ||||||||||||||||||| ||||  |||||||||||||||||| ||||    
T  31218305 agggactaaaaccggaattcgctaatattacagggac-gaaaagaggtatttaccctatatt 31218365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 228 - 284
Target Start/End: Original strand, 9619303 - 9619358
Alignment:
Q  228 agggactaaaactggaattcgctaatattacacggacaaaaaagaggtatttaccct 284  Q
    ||||||||||||  |||||||||||||||||| |||| |||||||||||||||||||    
T  9619303 agggactaaaaccagaattcgctaatattacagggac-aaaaagaggtatttaccct 9619358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 138 - 214
Target Start/End: Original strand, 15640950 - 15641026
Alignment:
Q  138 tatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaat 214  Q
    |||||| ||| ||||||| || ||||| |||  |||||||||||||||||||||||||| ||  |||||||||||||    
T  15640950 tatgcatattctgctgacgtggtgaaatgaggaaccaaaagtggaagaatctgaaattacagggacataatctaaat 15641026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 170 - 282
Target Start/End: Complemental strand, 34064093 - 34063983
Alignment:
Q  170 gaccaaaagtggaagaatctgaaattatagatacataatctaaatatcnnnnnnnnaaagggactaaaactggaattcgctaatattacacggacaaaaa 269  Q
    ||||||||||||||||||||||||||| ||| ||| ||||||||| |         | ||||||||||||| ||||||| |||||||||| ||||  |||    
T  34064093 gaccaaaagtggaagaatctgaaattacagagacaaaatctaaatct-ttttttttacagggactaaaactagaattcgttaatattacagggac-gaaa 34063996  T
Q  270 agaggtatttacc 282  Q
    |||||||||||||    
T  34063995 agaggtatttacc 34063983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 228 - 290
Target Start/End: Complemental strand, 46046484 - 46046423
Alignment:
Q  228 agggactaaaactggaattcgctaatattacacggacaaaaaagaggtatttaccctctattt 290  Q
    |||||||||||  ||||||||||||||||||| |||| ||||| ||||||||||||| |||||    
T  46046484 agggactaaaatcggaattcgctaatattacagggacgaaaaa-aggtatttaccctatattt 46046423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 269
Target Start/End: Original strand, 35376367 - 35376492
Alignment:
Q  142 cagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaatatcnnnnnnnnaaagggactaaaactg 241  Q
    |||||||||||||| || || || ||| |||||||||||||||| |||||||||| ||  ||| ||| |||  |||        | ||||||||||||||    
T  35376367 cagattttgctgacgtggtggaatgagggaccaaaagtggaagattctgaaattacagggacaaaatttaa--atcttttttttacagggactaaaactg 35376464  T
Q  242 gaattcgctaatattacacggacaaaaa 269  Q
    ||||| |||||||||||| |||| ||||    
T  35376465 gaatttgctaatattacagggacgaaaa 35376492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 138 - 214
Target Start/End: Complemental strand, 37012850 - 37012774
Alignment:
Q  138 tatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaat 214  Q
    |||||||||| ||||||| || || ||  || ||||||||||||||||||||||||||| ||  ||| |||||||||    
T  37012850 tatgcagattctgctgacgtggtggaataagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaat 37012774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 138 - 214
Target Start/End: Complemental strand, 38574111 - 38574035
Alignment:
Q  138 tatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaat 214  Q
    |||||||||| ||||||| || || || ||| |||||||||||||||||| |||||||| ||  ||| |||||||||    
T  38574111 tatgcagattctgctgacgtggtggaatgagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaat 38574035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 284
Target Start/End: Complemental strand, 41947019 - 41946964
Alignment:
Q  228 agggactaaaactggaattcgctaatattacacggacaaaaaagaggtatttaccct 284  Q
    |||||||||||| ||||||| ||||||||||| ||||  ||||||||||||||||||    
T  41947019 agggactaaaaccggaattcactaatattacagggac-gaaaagaggtatttaccct 41946964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 138 - 214
Target Start/End: Original strand, 48259986 - 48260062
Alignment:
Q  138 tatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaat 214  Q
    |||||||||| ||||||| ||||| || ||| || ||||||||||||||| |||||||| ||  ||| |||||||||    
T  48259986 tatgcagattatgctgacgtgatggaatgagcgatcaaaagtggaagaatttgaaattacagggacaaaatctaaat 48260062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 138 - 284
Target Start/End: Original strand, 9396934 - 9397077
Alignment:
Q  138 tatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaatatcnnnnnnnnaaagggactaaa 237  Q
    |||||||||| ||||||| || || || ||  | ||||||||||||||||||||||||| ||  ||| |||||||  |||        | ||||||||||    
T  9396934 tatgcagattctgctgacgtgttggaatgatggtccaaaagtggaagaatctgaaattacagggacaaaatctaa--atcttttttttacagggactaaa 9397031  T
Q  238 actggaattcgctaatattacacggacaaaaaagaggtatttaccct 284  Q
    || |||||| |||||||||||| ||||  |||||| |||||||||||    
T  9397032 accggaatttgctaatattacagggac-gaaaagaagtatttaccct 9397077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 232 - 283
Target Start/End: Original strand, 26252565 - 26252615
Alignment:
Q  232 actaaaactggaattcgctaatattacacggacaaaaaagaggtatttaccc 283  Q
    |||||||||||||||||||||||||||| ||||  ||||||| |||||||||    
T  26252565 actaaaactggaattcgctaatattacagggac-gaaaagagatatttaccc 26252615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 138 - 196
Target Start/End: Original strand, 3273855 - 3273913
Alignment:
Q  138 tatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaatta 196  Q
    |||||||||| | ||||| || ||||| ||| || ||||||||||||||||||||||||    
T  3273855 tatgcagattctactgacgtggtgaaatgagggatcaaaagtggaagaatctgaaatta 3273913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 138 - 196
Target Start/End: Original strand, 7819249 - 7819307
Alignment:
Q  138 tatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaatta 196  Q
    |||||||||| ||||||| || || || ||| |||||||||||||||||||||| ||||    
T  7819249 tatgcagattctgctgacgtggtggaatgagggaccaaaagtggaagaatctgacatta 7819307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 284
Target Start/End: Original strand, 18667620 - 18667669
Alignment:
Q  234 taaaactggaattcgctaatattacacggacaaaaaagaggtatttaccct 284  Q
    |||||||||||||||||||||||||| ||||  |||||||||||| |||||    
T  18667620 taaaactggaattcgctaatattacagggac-gaaaagaggtattaaccct 18667669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 257
Target Start/End: Complemental strand, 12520691 - 12520662
Alignment:
Q  228 agggactaaaactggaattcgctaatatta 257  Q
    ||||||||||||||||||||||||||||||    
T  12520691 agggactaaaactggaattcgctaatatta 12520662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 230 - 282
Target Start/End: Complemental strand, 9516662 - 9516611
Alignment:
Q  230 ggactaaaactggaattcgctaatattacacggacaaaaaagaggtatttacc 282  Q
    |||||||||| ||||||||||||||||||| ||||  ||||||| ||||||||    
T  9516662 ggactaaaaccggaattcgctaatattacagggac-gaaaagagatatttacc 9516611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 170 - 198
Target Start/End: Complemental strand, 12904857 - 12904829
Alignment:
Q  170 gaccaaaagtggaagaatctgaaattata 198  Q
    |||||||||||||||||||||||||||||    
T  12904857 gaccaaaagtggaagaatctgaaattata 12904829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 18713227 - 18713271
Alignment:
Q  170 gaccaaaagtggaagaatctgaaattatagatacataatctaaat 214  Q
    |||||||| |||||||||||||||||| ||| ||| |||||||||    
T  18713227 gaccaaaactggaagaatctgaaattacagagacaaaatctaaat 18713271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 141 - 213
Target Start/End: Original strand, 20069538 - 20069610
Alignment:
Q  141 gcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaa 213  Q
    ||||||| ||||||| || |  || ||| |||||||||||||||||||| |||| ||||  ||||||||||||    
T  20069538 gcagattctgctgacatgtttcaatgagagaccaaaagtggaagaatctcaaatgatagggacataatctaaa 20069610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 140 - 196
Target Start/End: Complemental strand, 43312350 - 43312294
Alignment:
Q  140 tgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaatta 196  Q
    ||||||||||||||||  ||| ||| ||| ||| ||||||||| |||||||||||||    
T  43312350 tgcagattttgctgacaggattaaacgagggactaaaagtggaggaatctgaaatta 43312294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 228 - 284
Target Start/End: Complemental strand, 48259877 - 48259822
Alignment:
Q  228 agggactaaaactggaattcgctaatattacacggacaaaaaagaggtatttaccct 284  Q
    ||||| |||||| ||||||||||||||||||| ||||  ||||||| ||||||||||    
T  48259877 agggattaaaaccggaattcgctaatattacagggac-gaaaagagatatttaccct 48259822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 134; Significance: 1e-69; HSPs: 51)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 23 - 284
Target Start/End: Complemental strand, 45970173 - 45969914
Alignment:
Q  23 caccacgccagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatgaaat 122  Q
    |||||||  ||||||||| ||||| |||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||| ||||||    
T  45970173 caccacgtaagcagaatccgcatacatgacacgtaaaatgagggaccaaaagtggagaaatctgaaattacagggaccaaaagtgggaggaatctgaaat 45970074  T
Q  123 tacaaggacgtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaatatcnnnnn 222  Q
    |||| |||||||||||||||||||| || ||||||||||||||||| ||||||||||| ||||||||||||||| ||  ||| ||||||||| |          
T  45970073 tacagggacgtaatttatgcagattctgttgacttgatgaaaggagagaccaaaagtgaaagaatctgaaattacagggacaaaatctaaatct-ttttt 45969975  T
Q  223 nnnaaagggactaaaactggaattcgctaatattacacggacaaaaaagaggtatttaccct 284  Q
       | |||||||||||| ||||||| ||||||||||| ||||  ||||||||||||||||||    
T  45969974 tttacagggactaaaaccggaattcactaatattacagggac-gaaaagaggtatttaccct 45969914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 23 - 284
Target Start/End: Original strand, 14171706 - 14171965
Alignment:
Q  23 caccacgccagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatgaaat 122  Q
    ||||||| |||||||||||||||| ||| |||||||||||||||| ||||| ||||| |||||||||||| |||||||||||||||||||||| ||||||    
T  14171706 caccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaaatggaggaatctgaaattacagggaccaaaagtgggaggaatctgaaat 14171805  T
Q  123 tacaaggacgtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaatatcnnnnn 222  Q
    ||||||| ||||||| ||||||||||||||||| |||||||||||  ||||||||||||||||||| ||||||| ||  ||| ||||||||| |          
T  14171806 tacaaggtcgtaattgatgcagattttgctgacgtgatgaaaggaaggaccaaaagtggaagaatcagaaattacagggacaaaatctaaatct-tttta 14171904  T
Q  223 nnnaaagggactaaaactggaattcgctaatattacacggacaaaaaagaggtatttaccct 284  Q
       | |||||||||||| ||||||||||||||||||| ||||  ||||||||||||||||||    
T  14171905 tttacagggactaaaaccggaattcgctaatattacagggac-gaaaagaggtatttaccct 14171965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 23 - 196
Target Start/End: Original strand, 19112885 - 19113058
Alignment:
Q  23 caccacgccagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatgaaat 122  Q
    |||||||  ||||||||||||||| |||  ||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||| ||||||    
T  19112885 caccacgtaagcagaatctgcatacatggtacgtaaaatgagggaccaaaagtggagaaatctgaaattacagggaccaaaagtgggaggaatctgaaat 19112984  T
Q  123 tacaaggacgtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaatta 196  Q
    ||||||||||||||||||||||||| || ||||||||||||||||| |||||||||| ||||||||||||||||    
T  19112985 tacaaggacgtaatttatgcagattctgttgacttgatgaaaggagggaccaaaagtagaagaatctgaaatta 19113058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 23 - 284
Target Start/End: Original strand, 30500161 - 30500419
Alignment:
Q  23 caccacgccagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatgaaat 122  Q
    ||||||| |||||||||||||||| ||| ||||||||||||||||||||||||| || ||| |||||||| | |||||||||||||||||||| ||||||    
T  30500161 caccacgtcagcagaatctgcatacatggcacgtaaaatgagggaccaaaagtgaaggaatttgaaattacatggaccaaaagtgggaggaatctgaaat 30500260  T
Q  123 tacaaggacgtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaatatcnnnnn 222  Q
    |||| ||| |||||||||| ||||||||||||| |||||||||||| |||||||||||||| ||| |||||||| ||  ||| ||||||||| |          
T  30500261 tacagggatgtaatttatgtagattttgctgacgtgatgaaaggagggaccaaaagtggaacaatatgaaattacagggacaaaatctaaattt--tttt 30500358  T
Q  223 nnnaaagggactaaaactggaattcgctaatattacacggacaaaaaagaggtatttaccct 284  Q
       | |||||||||||||||||||||||||||||||| ||||  ||||||||||||||||||    
T  30500359 tttacagggactaaaactggaattcgctaatattacagggac-gaaaagaggtatttaccct 30500419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 19 - 214
Target Start/End: Complemental strand, 43572653 - 43572456
Alignment:
Q  19 atttcaccacgccagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatg 118  Q
    ||||||||||| ||||||||||||| || |||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  43572653 atttcaccacgtcagcagaatctgcgtaaatgacacgtaaaatgagggaccaaaagtggagtaatttgaaattacagggaccaaaagtgggaggaatatg 43572554  T
Q  119 aaattacaaggacgtaatttatgcagattttgctgact---tgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaat 214  Q
    |||||||| |||||||| || |||||||| ||||||||   |||||||||||| ||||||||||||||||||||||||||| ||  ||| |||||||||    
T  43572553 aaattacagggacgtaa-ttgtgcagattctgctgacttgatgatgaaaggagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaat 43572456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 32 - 284
Target Start/End: Complemental strand, 16722240 - 16721990
Alignment:
Q  32 agcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatgaaattacaaggac 131  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| |||||||| ||||||||||||| ||||||||||  |||    
T  16722240 agcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggaccagaagtgggaggaatctgaaattacagtgac 16722141  T
Q  132 gtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaatatcnnnnnnnnaaaggg 231  Q
     ||||||||||||||| || |||||||||||||| || ||||||||||||||||||||||||||| |   ||| ||||||||| |         | || |    
T  16722140 ataatttatgcagattctgttgacttgatgaaagaagggaccaaaagtggaagaatctgaaattacatggacaaaatctaaat-ttttttttttacagtg 16722042  T
Q  232 actaaaactggaattcgctaatattacacggacaaaaaagaggtatttaccct 284  Q
    |||||||| ||||||||||||||||||| ||||  ||||||||||||||||||    
T  16722041 actaaaaccggaattcgctaatattacagggac-gaaaagaggtatttaccct 16721990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 23 - 284
Target Start/End: Complemental strand, 49986786 - 49986526
Alignment:
Q  23 caccacgccagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatgaaat 122  Q
    |||||||  ||||||||||||||| |||  ||||||||||||||||||||||||||| |||||||||||| |||||||||||||| ||||||| ||||||    
T  49986786 caccacgtaagcagaatctgcatacatggtacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggaccaaaagtgagaggaatctgaaat 49986687  T
Q  123 tacaaggacgtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaatatcnnnnn 222  Q
    ||||||||||||||||||||||||| |  | | ||||||||||||| |||||||||| |||||||||||||||| ||  ||| ||||||||| |          
T  49986686 tacaaggacgtaatttatgcagattctattaaattgatgaaaggagagaccaaaagtagaagaatctgaaattacagggacaaaatctaaatcttttttt 49986587  T
Q  223 nnnaaagggactaaaactggaattcgctaatattacacggacaaaaaagaggtatttaccct 284  Q
       | || ||||||||| ||||||| ||||||||||| ||||  ||||||||||||||||||    
T  49986586 tttacagtgactaaaaccggaattctctaatattacagggac-gaaaagaggtatttaccct 49986526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 23 - 283
Target Start/End: Complemental strand, 14162129 - 14161871
Alignment:
Q  23 caccacgccagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatgaaat 122  Q
    ||||||| ||||| ||| |||||| ||| |||||||||||||||||||||| ||||| ||| |||||||| ||||||||||| | |||||||| ||||||    
T  14162129 caccacgtcagcaaaatttgcatacatggcacgtaaaatgagggaccaaaaatggaggaatttgaaattacagggaccaaaattaggaggaatctgaaat 14162030  T
Q  123 tacaaggacgtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaatatcnnnnn 222  Q
    |||| |||||||||||||||||||| ||||||| |||||||||||| |||||||||||||||||| |||||||| ||  ||||||||||||| |          
T  14162029 tacagggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtggaagaatatgaaattacagggacataatctaaatct-ttttt 14161931  T
Q  223 nnnaaagggactaaaactggaattcgctaatattacacggacaaaaaagaggtatttaccc 283  Q
       | ||| |||||||||||||||||||||||||||| ||||  ||||||| |||||||||    
T  14161930 tttataggaactaaaactggaattcgctaatattacagggac-gaaaagagatatttaccc 14161871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 23 - 214
Target Start/End: Complemental strand, 33372663 - 33372473
Alignment:
Q  23 caccacgccagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatgaaat 122  Q
    ||||||| ||||||||||||||||  ||||||||||||||||||| ||||||||||| ||| |||||||| || ||||||||||||||||||| ||||||    
T  33372663 caccacgtcagcagaatctgcatac-tgacacgtaaaatgagggatcaaaagtggaggaatatgaaattacagagaccaaaagtgggaggaatctgaaat 33372565  T
Q  123 tacaaggacgtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaat 214  Q
    ||||||||| ||||| ||||||||||||||||| |||||||||||| |||||||||||||| |||||||||||| ||  ||| |||||||||    
T  33372564 tacaaggacttaattgatgcagattttgctgacgtgatgaaaggagggaccaaaagtggaataatctgaaattacagggacaaaatctaaat 33372473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 31 - 282
Target Start/End: Original strand, 52552820 - 52553065
Alignment:
Q  31 cagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatgaaattacaagga 130  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| || ||| |||||||| |||||||||    ||||||||| |||||||||| |||    
T  52552820 cagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtgaaggaatttgaaattacagggaccaa----gggaggaatctgaaattacaggga 52552915  T
Q  131 cgtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaatatcnnnnnnnnaaagg 230  Q
    ||||||||||||||||| ||||||| |||||||||||| |||||||||||||||||| |||||||| ||| ||| ||||||||| |         | |||    
T  52552916 cgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtggaagaatatgaaattacagagacaaaatctaaatct-ttttttttacagg 52553014  T
Q  231 gactaaaactggaattcgctaatattacacggacaaaaaagaggtatttacc 282  Q
    |||||||||| |||||||||||||||||| ||||  |||||| |||||||||    
T  52553015 gactaaaactagaattcgctaatattacaaggac-gaaaagatgtatttacc 52553065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 32 - 284
Target Start/End: Original strand, 9267104 - 9267353
Alignment:
Q  32 agcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatgaaattacaaggac 131  Q
    ||||||||||||||| ||   ||||||||||||||||||||||||||| |||||||||||| | |||||||||||||||||||| |||||||||||||||    
T  9267104 agcagaatctgcatacattgtacgtaaaatgagggaccaaaagtggaggaatctgaaattacaaggaccaaaagtgggaggaatctgaaattacaaggac 9267203  T
Q  132 gtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaatatcnnnnnnnnaaaggg 231  Q
     ||||||||||||||| || ||||||||||||||||| |||||||||| ||||||||||| |||| ||  ||| |||||||| |          | ||||    
T  9267204 ttaatttatgcagattctgttgacttgatgaaaggagggaccaaaagtagaagaatctgatattacagggacaaaatctaaaaa--atttatatacaggg 9267301  T
Q  232 actaaaactggaattcgctaatattacacggacaaaaaagaggtatttaccct 284  Q
    |||||||  ||||||||||||||||||| ||||  ||||||||||||||||||    
T  9267302 actaaaatcggaattcgctaatattacaaggac-gaaaagaggtatttaccct 9267353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 31 - 284
Target Start/End: Original strand, 14262164 - 14262415
Alignment:
Q  31 cagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatgaaattacaagga 130  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||||| ||| |||||||| ||||| ||||||||| |||||| | |||||||| |||    
T  14262164 cagcagaatctgcatacatggcacgtaaaatgagggaccaaaagtggaggaatttgaaattacagggatcaaaagtggaaggaatctaaaattacaggga 14262263  T
Q  131 cgtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaatatcnnnnnnnnaaagg 230  Q
    ||||||||||||||||| ||||||| |||||||||||| ||| |||||||||| ||| |||||||| ||  ||| ||||||||| |         | |||    
T  14262264 cgtaatttatgcagattctgctgacgtgatgaaaggagggactaaaagtggaacaatatgaaattacagggacaaaatctaaatct-ttttttttacagg 14262362  T
Q  231 gactaaaactggaattcgctaatattacacggacaaaaaagaggtatttaccct 284  Q
    ||||||||| ||||||||||||||||||| ||||  ||||||||||||||||||    
T  14262363 gactaaaaccggaattcgctaatattacagggac-gaaaagaggtatttaccct 14262415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 35 - 196
Target Start/End: Complemental strand, 21633142 - 21632981
Alignment:
Q  35 agaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatgaaattacaaggacgta 134  Q
    |||||||||||| ||| ||| |||||||||||||||||||||||| |||||||||||| | |||||||||||||||||||| |||||||||| |||||||    
T  21633142 agaatctgcatacatggcacataaaatgagggaccaaaagtggaggaatctgaaattacaaggaccaaaagtgggaggaatctgaaattacagggacgta 21633043  T
Q  135 atttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaatta 196  Q
    ||||||||||||| || ||||||||||||||||| ||||||||||| |||||||||||||||    
T  21633042 atttatgcagattctgttgacttgatgaaaggagggaccaaaagtgaaagaatctgaaatta 21632981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 23 - 196
Target Start/End: Complemental strand, 15328718 - 15328545
Alignment:
Q  23 caccacgccagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatgaaat 122  Q
    ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||| ||| |||||||| |||||||||||||||||||||| ||||||    
T  15328718 caccacgtcagcagaatctgcatatatgacacgtaaaatgagagaccaaaagtggaggaatttgaaattacagggaccaaaagtgggaggaatctgaaat 15328619  T
Q  123 tacaaggacgtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaatta 196  Q
    |||| |||||||||||||||||||| || |||| |||||||| ||| |||  ||| ||||||||| ||||||||    
T  15328618 tacagggacgtaatttatgcagattctgttgacgtgatgaaaagagggacacaaactggaagaatatgaaatta 15328545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 35 - 214
Target Start/End: Original strand, 20853828 - 20854007
Alignment:
Q  35 agaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatgaaattacaaggacgta 134  Q
    |||||||||||| ||| |||||||||||||||||||||||||||| ||||| |||||| || ||||| ||||||||||||| ||||||||||  ||| ||    
T  20853828 agaatctgcatacatggcacgtaaaatgagggaccaaaagtggaggaatctaaaattacagagaccagaagtgggaggaatctgaaattacagtgacata 20853927  T
Q  135 atttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaat 214  Q
    ||||||||||||| || ||||||||||||||||| ||||||||||||||||||||||||||| ||  ||| |||||||||    
T  20853928 atttatgcagattatgttgacttgatgaaaggagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaat 20854007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 23 - 214
Target Start/End: Complemental strand, 45003754 - 45003563
Alignment:
Q  23 caccacgccagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatgaaat 122  Q
    |||||||  ||||||||||||||| ||| || ||||||||||||| ||||||||||| ||| |||||||| ||||| |||||||||||||||| ||||||    
T  45003754 caccacgtaagcagaatctgcatacatggcatgtaaaatgagggatcaaaagtggaggaatatgaaattacagggaacaaaagtgggaggaatctgaaat 45003655  T
Q  123 tacaaggacgtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaat 214  Q
    |||||||||||||||||| |||||| || |||| |||||||||||| ||| ||||||||||||||||||||||| ||  ||| |||||||||    
T  45003654 tacaaggacgtaatttatacagattctgttgacgtgatgaaaggagggacaaaaagtggaagaatctgaaattacagggacaaaatctaaat 45003563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 23 - 196
Target Start/End: Original strand, 35995798 - 35995971
Alignment:
Q  23 caccacgccagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatgaaat 122  Q
    |||||||  ||||||||||||||| |||||||||||||||||||||||||||||||| ||  |||||||| |||||| ||||||||||||||| | ||      
T  35995798 caccacgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaacatgaaattacagggacaaaaagtgggaggaatctaaata 35995897  T
Q  123 tacaaggacgtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaatta 196  Q
    ||||||||||||||||||||||||| ||| ||| ||||||||| || |||||||||||||||||||||||||||    
T  35995898 tacaaggacgtaatttatgcagattctgcggacgtgatgaaagaagggaccaaaagtggaagaatctgaaatta 35995971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 23 - 212
Target Start/End: Original strand, 47575392 - 47575581
Alignment:
Q  23 caccacgccagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatgaaat 122  Q
    ||||||| |||||||||||||||| ||| |||||||||||||||| ||||||||||| ||| |||||||| |||||| |||| |||||||||| ||||||    
T  47575392 caccacggcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatttgaaattacagggacaaaaaatgggaggaatttgaaat 47575491  T
Q  123 tacaaggacgtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaa 212  Q
    |||| |||  ||||||||||||||| ||||||| |||||||||||| |||||||||| ||| |||||||||||| ||| ||| |||||||    
T  47575492 tacagggatataatttatgcagattctgctgacgtgatgaaaggagagaccaaaagttgaaaaatctgaaattacagagacaaaatctaa 47575581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 19 - 194
Target Start/End: Original strand, 4204824 - 4204999
Alignment:
Q  19 atttcaccacgccagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatg 118  Q
    ||||||||||| |||||||||||||||| ||| |||||||||||||||||||||||||||||||| |||||||| || |||||| |||||||||||| ||    
T  4204824 atttcaccacgtcagcagaatctgcatacatggcacgtaaaatgagggaccaaaagtggagtaatatgaaattacagagaccaatagtgggaggaatctg 4204923  T
Q  119 aaattacaaggacgtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaat 194  Q
    |||||| | ||| |||||||||||||||| | ||||| |||| ||| ||| || ||||||||||||||||||||||    
T  4204924 aaattatatggatgtaatttatgcagattctactgacgtgataaaaagagggatcaaaagtggaagaatctgaaat 4204999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 19 - 214
Target Start/End: Complemental strand, 38283812 - 38283617
Alignment:
Q  19 atttcaccacgccagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatg 118  Q
    |||||| |||| |||||||||||||||| ||| |||||||||||||||||||||||||||| ||| |||||||| | |||| ||||||||||||||| |     
T  38283812 atttcatcacgtcagcagaatctgcatacatggcacgtaaaatgagggaccaaaagtggaggaatttgaaattacacggacaaaaagtgggaggaatctt 38283713  T
Q  119 aaattacaaggacgtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaat 214  Q
    |||||||| |||||||| ||||| ||||| ||||||| |||||||||||| || ||||||||||| ||| |||||||||||  ||| |||||||||    
T  38283712 aaattacagggacgtaacttatgtagattctgctgacgtgatgaaaggagggatcaaaagtggaacaatatgaaattataggaacaaaatctaaat 38283617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 31 - 283
Target Start/End: Complemental strand, 5800855 - 5800605
Alignment:
Q  31 cagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatgaaattacaagga 130  Q
    ||||| ||| |||||| ||| || ||||||||||||||||||| ||||| ||| |||||||| ||||||||||| | |||||||| |||||||||| |||    
T  5800855 cagcaaaatttgcatacatggcatgtaaaatgagggaccaaaaatggaggaatttgaaattacagggaccaaaactaggaggaatctgaaattacaggga 5800756  T
Q  131 cgtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaatatcnnnnnnnnaaagg 230  Q
    ||||||||||||||||| ||||||| |||||||||||| |||||||| ||||||||| |||||||| ||  |||||||||||||  |        | |||    
T  5800755 cgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaaatggaagaatatgaaattacagggacataatctaaat-ccttttttttacagg 5800657  T
Q  231 gactaaaactggaattcgctaatattacacggacaaaaaagaggtatttaccc 283  Q
    ||||||||| | |||||| |||||||||| ||||  |||||||||||||||||    
T  5800656 gactaaaaccgaaattcgttaatattacagggac-gaaaagaggtatttaccc 5800605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 23 - 284
Target Start/End: Original strand, 17465488 - 17465746
Alignment:
Q  23 caccacgccagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatgaaat 122  Q
    |||||||  ||||||||||||||| ||| |||||||||||||||||||||||||||| ||| |||||||| ||| |||||||||||||||||| ||||||    
T  17465488 caccacgtaagcagaatctgcatacatggcacgtaaaatgagggaccaaaagtggaggaatatgaaattacagg-accaaaagtgggaggaatctgaaat 17465586  T
Q  123 tacaaggacgtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaatatcnnnnn 222  Q
    ||||  ||||||||||||| | |||||| |||| |||||||||||| ||||||||||| |||||||| || ||| ||  ||| ||| |||||||          
T  17465587 tacagagacgtaatttatgtaaattttgttgacgtgatgaaaggagggaccaaaagtgaaagaatctaaagttacagggacaaaatttaaatat-tttat 17465685  T
Q  223 nnnaaagggactaaaactggaattcgctaatattacacggacaaaaaagaggtatttaccct 284  Q
       | || || |||||||| ||||||||||||||||| ||||  ||||||||||||||||||    
T  17465686 tttacagagattaaaactgaaattcgctaatattacaaggac-gaaaagaggtatttaccct 17465746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 70 - 284
Target Start/End: Complemental strand, 11003943 - 11003731
Alignment:
Q  70 aaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatgaaattacaaggacgtaatttatgcagattttgctgacttgatgaaaggagt 169  Q
    |||||||||| |||||||||||| |||||||||||||||||||||| |||||||||| |||||||||| ||||| |||||| ||||||||||||||||      
T  11003943 aaaagtggaggaatctgaaattacagggaccaaaagtgggaggaatctgaaattacagggacgtaattgatgcatattttgttgacttgatgaaaggatg 11003844  T
Q  170 gaccaaaagtggaagaatctgaaattatagatacataatctaaatatcnnnnnnnnaaagggactaaaactggaattcgctaatattacacggacaaaaa 269  Q
    ||||||||||||||||||||||||||| |   ||| ||||||| | |         | |||||||||||| |||||||| |||||||||| |||| ||||    
T  11003843 gaccaaaagtggaagaatctgaaattacaaggacaaaatctaagtct-ttttatttacagggactaaaaccggaattcggtaatattacaaggac-aaaa 11003746  T
Q  270 agaggtatttaccct 284  Q
    |||||||||||||||    
T  11003745 agaggtatttaccct 11003731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 117 - 214
Target Start/End: Original strand, 17649224 - 17649321
Alignment:
Q  117 tgaaattacaaggacgtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaat 214  Q
    |||||||||| |||||||||||||||||||| || ||||||||| ||||||| ||||||| |||||| |||||||||||| ||  ||| |||||||||    
T  17649224 tgaaattacagggacgtaatttatgcagattctgttgacttgataaaaggagagaccaaatgtggaataatctgaaattacagggacaaaatctaaat 17649321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 138 - 214
Target Start/End: Complemental strand, 4204851 - 4204775
Alignment:
Q  138 tatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaat 214  Q
    |||||||||| ||||||| || ||||| ||| ||||||||||||||||||||||||||| ||  |||||||||||||    
T  4204851 tatgcagattctgctgacgtggtgaaatgagggaccaaaagtggaagaatctgaaattacagggacataatctaaat 4204775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 138 - 283
Target Start/End: Original strand, 14162106 - 14162248
Alignment:
Q  138 tatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaatatcnnnnnnnnaaagggactaaa 237  Q
    |||||| ||||||||||| || || ||  || ||||||||||||||||||||||||||| |   ||| ||||||||| ||        | ||||||||||    
T  14162106 tatgcaaattttgctgacgtggtggaataagggaccaaaagtggaagaatctgaaattacaaggacaaaatctaaatctctttttt--acagggactaaa 14162203  T
Q  238 actggaattcgctaatattacacggacaaaaaagaggtatttaccc 283  Q
    || ||||||||||||||||||| |||| ||||||||||||| ||||    
T  14162204 accggaattcgctaatattacagggac-aaaaagaggtattaaccc 14162248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 138 - 214
Target Start/End: Original strand, 38283785 - 38283861
Alignment:
Q  138 tatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaat 214  Q
    |||||||||| ||||||| ||||||||  || || |||||||||||||||||||||||||||  ||| |||||||||    
T  38283785 tatgcagattctgctgacgtgatgaaataagggatcaaaagtggaagaatctgaaattatagggacaaaatctaaat 38283861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 135 - 214
Target Start/End: Original strand, 43572623 - 43572702
Alignment:
Q  135 atttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaat 214  Q
    ||||| ||||||| ||||||| || ||||| ||| ||||||||||||||||||||||||||| ||  ||| |||||||||    
T  43572623 atttacgcagattctgctgacgtggtgaaatgagggaccaaaagtggaagaatctgaaattacagggacagaatctaaat 43572702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 138 - 284
Target Start/End: Complemental strand, 9267118 - 9266974
Alignment:
Q  138 tatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaatatcnnnnnnnnaaagggactaaa 237  Q
    |||||||||| |||| || || || || ||| |||||||||||||||||| |||||||| ||  ||| ||||||||| |         | ||||||||||    
T  9267118 tatgcagattctgcttacgtgctggaatgagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatct-ttttttttacagggactaaa 9267020  T
Q  238 actggaattcgctaatattacacggacaaaaaagaggtatttaccct 284  Q
    || ||||||||||||||||||| ||||  ||||||||||||||||||    
T  9267019 accggaattcgctaatattacagggac-gaaaagaggtatttaccct 9266974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 228 - 284
Target Start/End: Original strand, 16722315 - 16722370
Alignment:
Q  228 agggactaaaactggaattcgctaatattacacggacaaaaaagaggtatttaccct 284  Q
    |||||||||||||| ||||||||||||||||| ||||  ||||||||||||||||||    
T  16722315 agggactaaaactgaaattcgctaatattacagggac-gaaaagaggtatttaccct 16722370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 228 - 284
Target Start/End: Complemental strand, 19112818 - 19112763
Alignment:
Q  228 agggactaaaactggaattcgctaatattacacggacaaaaaagaggtatttaccct 284  Q
    |||||||||||| ||||||||||||||||||| ||||  ||||||||||||||||||    
T  19112818 agggactaaaaccggaattcgctaatattacatggac-gaaaagaggtatttaccct 19112763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 228 - 292
Target Start/End: Original strand, 35741908 - 35741971
Alignment:
Q  228 agggactaaaactggaattcgctaatattacacggacaaaaaagaggtatttaccctctattttt 292  Q
    |||||||||||||||||||||||||||||||| ||||  ||||| |||||| ||||| |||||||    
T  35741908 agggactaaaactggaattcgctaatattacagggac-caaaagtggtattaaccctttattttt 35741971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 228 - 286
Target Start/End: Original strand, 27946189 - 27946246
Alignment:
Q  228 agggactaaaactggaattcgctaatattacacggacaaaaaagaggtatttaccctct 286  Q
    |||||||||||| ||||||||||||||||||  ||||  ||||||||||||||||||||    
T  27946189 agggactaaaaccggaattcgctaatattactgggac-gaaaagaggtatttaccctct 27946246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 138 - 284
Target Start/End: Complemental strand, 35995821 - 35995677
Alignment:
Q  138 tatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaatatcnnnnnnnnaaagggactaaa 237  Q
    |||||||||| |||| || || || || ||| ||||||||||||||||||||||||||| ||  ||| |||||||| |          | ||||||||||    
T  35995821 tatgcagattctgcttacgtggtggaatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaaaaa-aaaattctacagggactaaa 35995723  T
Q  238 actggaattcgctaatattacacggacaaaaaagaggtatttaccct 284  Q
    || ||||||||||||||||||| |||   ||||||||||||||||||    
T  35995722 accggaattcgctaatattaca-ggaacgaaaagaggtatttaccct 35995677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 170 - 269
Target Start/End: Complemental strand, 14262147 - 14262049
Alignment:
Q  170 gaccaaaagtggaagaatctgaaattatagatacataatctaaatatcnnnnnnnnaaagggactaaaactggaattcgctaatattacacggacaaaaa 269  Q
    ||||||||||||||||||||||||||| ||  ||| |||||||||||         | | |||||||||| ||||||||||||||||||| |||| ||||    
T  14262147 gaccaaaagtggaagaatctgaaattacagggacaaaatctaaatat-ttttttttacaaggactaaaaccggaattcgctaatattacagggacgaaaa 14262049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 228 - 283
Target Start/End: Complemental strand, 19720387 - 19720333
Alignment:
Q  228 agggactaaaactggaattcgctaatattacacggacaaaaaagaggtatttaccc 283  Q
    |||||||||||| ||||||||||||||||||| ||||  ||||||| |||||||||    
T  19720387 agggactaaaaccggaattcgctaatattacagggac-gaaaagagatatttaccc 19720333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 170 - 284
Target Start/End: Complemental strand, 20853807 - 20853694
Alignment:
Q  170 gaccaaaagtggaagaatctgaaattatagatacataatctaaatatcnnnnnnnnaaagggactaaaactggaattcgctaatattacacggacaaaaa 269  Q
    |||||||||||||||||| |||||||||||  ||| ||||||||| |         | ||||  |||||| | ||||||||||||||||| ||||  |||    
T  20853807 gaccaaaagtggaagaatatgaaattatagggacaaaatctaaatcttttttttttacagggtttaaaaccgaaattcgctaatattacagggac-gaaa 20853709  T
Q  270 agaggtatttaccct 284  Q
    |||||||||||||||    
T  20853708 agaggtatttaccct 20853694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 170 - 264
Target Start/End: Original strand, 21633163 - 21633256
Alignment:
Q  170 gaccaaaagtggaagaatctgaaattatagatacataatctaaatatcnnnnnnnnaaagggactaaaactggaattcgctaatattacacggac 264  Q
    ||||||||||||||||||||||||||| ||  ||| ||||||||| |         | |||||||||||||| ||||||||||||||||| ||||    
T  21633163 gaccaaaagtggaagaatctgaaattacagggacaaaatctaaatct-ttttttttatagggactaaaactgaaattcgctaatattacagggac 21633256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 270
Target Start/End: Original strand, 46850513 - 46850551
Alignment:
Q  232 actaaaactggaattcgctaatattacacggacaaaaaa 270  Q
    |||||||| ||||||||||||||||||| ||||||||||    
T  46850513 actaaaacaggaattcgctaatattacatggacaaaaaa 46850551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 99
Target Start/End: Complemental strand, 4204827 - 4204786
Alignment:
Q  58 aaatgagggaccaaaagtggagtaatctgaaattagagggac 99  Q
    |||||||||||||||||||||  |||||||||||| ||||||    
T  4204827 aaatgagggaccaaaagtggaagaatctgaaattacagggac 4204786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 99
Target Start/End: Original strand, 43572650 - 43572691
Alignment:
Q  58 aaatgagggaccaaaagtggagtaatctgaaattagagggac 99  Q
    |||||||||||||||||||||  |||||||||||| ||||||    
T  43572650 aaatgagggaccaaaagtggaagaatctgaaattacagggac 43572691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 199
Target Start/End: Original strand, 45003731 - 45003792
Alignment:
Q  138 tatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatag 199  Q
    |||||||||| |||| || || || || ||| |||||||||||||||||| |||||||||||    
T  45003731 tatgcagattctgcttacgtggtggaatgagggaccaaaagtggaagaatatgaaattatag 45003792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 284
Target Start/End: Original strand, 45970183 - 45970295
Alignment:
Q  171 accaaaagtggaagaatctgaaattatagatacataatctaaatatcnnnnnnnnaaagggactaaaactggaattcgctaatattacacggacaaaaaa 270  Q
    |||||||||||||||||||||||||| ||  ||| ||| ||||| |         | |||||||||||| | ||||| ||||||||||| ||||  ||||    
T  45970183 accaaaagtggaagaatctgaaattacagggacaaaatttaaatcttttttttttacagggactaaaaccgaaattcactaatattacagggac-gaaaa 45970281  T
Q  271 gaggtatttaccct 284  Q
    ||||||||||||||    
T  45970282 gaggtatttaccct 45970295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 138 - 214
Target Start/End: Complemental strand, 14171729 - 14171653
Alignment:
Q  138 tatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaat 214  Q
    |||||||||| ||||||| || || || ||| || ||||||||||||||| |||||||| ||  ||| |||||||||    
T  14171729 tatgcagattctgctgacgtggtggaatgagggatcaaaagtggaagaatttgaaattacagggacaaaatctaaat 14171653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 138 - 214
Target Start/End: Original strand, 15328695 - 15328771
Alignment:
Q  138 tatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaat 214  Q
    |||||||||| ||||||| || || ||  || |||||||||||||| |||||||||||| ||  ||| |||||||||    
T  15328695 tatgcagattctgctgacgtggtggaataagggaccaaaagtggaaaaatctgaaattacagggacaaaatctaaat 15328771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 59 - 99
Target Start/End: Original strand, 21633156 - 21633196
Alignment:
Q  59 aatgagggaccaaaagtggagtaatctgaaattagagggac 99  Q
    ||||||||||||||||||||  |||||||||||| ||||||    
T  21633156 aatgagggaccaaaagtggaagaatctgaaattacagggac 21633196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 138 - 214
Target Start/End: Complemental strand, 30500184 - 30500108
Alignment:
Q  138 tatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaat 214  Q
    |||||||||| ||||||| || || ||  || |||||||||||||||||| |||||||| ||  ||| |||||||||    
T  30500184 tatgcagattctgctgacgtggtggaataagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaat 30500108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 229 - 269
Target Start/End: Complemental strand, 35740870 - 35740830
Alignment:
Q  229 gggactaaaactggaattcgctaatattacacggacaaaaa 269  Q
    ||||||||||| ||||||||||||||||||| |||| ||||    
T  35740870 gggactaaaaccggaattcgctaatattacagggaccaaaa 35740830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 59 - 99
Target Start/End: Complemental strand, 35995796 - 35995756
Alignment:
Q  59 aatgagggaccaaaagtggagtaatctgaaattagagggac 99  Q
    ||||||||||||||||||||  |||||||||||| ||||||    
T  35995796 aatgagggaccaaaagtggaagaatctgaaattacagggac 35995756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 228 - 284
Target Start/End: Original strand, 35995999 - 35996054
Alignment:
Q  228 agggactaaaactggaattcgctaatattacacggacaaaaaagaggtatttaccct 284  Q
    |||||||||||  ||||||||||||||||||| ||||  |||||| |||||||||||    
T  35995999 agggactaaaatcggaattcgctaatattacagggac-gaaaagatgtatttaccct 35996054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 138 - 214
Target Start/End: Complemental strand, 52552835 - 52552759
Alignment:
Q  138 tatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaat 214  Q
    |||||||||| ||||||| || || ||  || || |||||||||||||||||||||||| ||  ||| |||||||||    
T  52552835 tatgcagattctgctgacatggtggaataagggatcaaaagtggaagaatctgaaattacagggacaaaatctaaat 52552759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 132; Significance: 2e-68; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 23 - 214
Target Start/End: Original strand, 7126037 - 7126228
Alignment:
Q  23 caccacgccagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatgaaat 122  Q
    ||||||| |||||||||||||||| ||| |||||||||||||||||||||||||||| ||| |||||||| |||||||||||||||||||||||||||||    
T  7126037 caccacgtcagcagaatctgcatacatggcacgtaaaatgagggaccaaaagtggaggaatttgaaattacagggaccaaaagtgggaggaatatgaaat 7126136  T
Q  123 tacaaggacgtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaat 214  Q
    |||| |||||||||||||||||||| ||||||| |||||||||||| |||||||||||||||||| |||||||| ||  ||| |||||||||    
T  7126137 tacagggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaat 7126228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 19 - 284
Target Start/End: Complemental strand, 24074564 - 24074302
Alignment:
Q  19 atttcaccacgccagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatg 118  Q
    |||| |||||| |||||||||||||||||||| |||||||||||||||||||||||||||| ||| |||||||| ||| | ||||||||||| |||| ||    
T  24074564 atttaaccacgtcagcagaatctgcatatatggcacgtaaaatgagggaccaaaagtggagaaatttgaaattacagg-atcaaaagtgggatgaatctg 24074466  T
Q  119 aaattacaaggacgtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaatatcn 218  Q
    ||||||   |||||||||||||||||||| ||||||| |||||||||||| |||||||||||||||||| |||||||| ||| ||| |||||||||||      
T  24074465 aaattatggggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtggaagaatatgaaattacagagacaaaatctaaatat-t 24074367  T
Q  219 nnnnnnnaaagggactaaaactggaattcgctaatattacacggacaaaaaagaggtatttaccct 284  Q
           | |||||||||||| | ||||||||||||||||| ||||  ||||||||||||||||||    
T  24074366 tttttttacagggactaaaaccgaaattcgctaatattacatggac-gaaaagaggtatttaccct 24074302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 23 - 283
Target Start/End: Original strand, 24837289 - 24837547
Alignment:
Q  23 caccacgccagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatgaaat 122  Q
    |||||||  ||||||||||| ||| |||  ||||||||||||||| ||||||||||| |||||||||||| |||||||||||||| ||||||| ||||||    
T  24837289 caccacgtaagcagaatctgtatacatggtacgtaaaatgagggatcaaaagtggaggaatctgaaattacagggaccaaaagtgagaggaatctgaaat 24837388  T
Q  123 tacaaggacgtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaatatcnnnnn 222  Q
    ||||||||||||||||||||||||| || ||||||||||||||||| || ||||||| ||||||| |||||||| ||  ||| ||||||||| |          
T  24837389 tacaaggacgtaatttatgcagattctgttgacttgatgaaaggagggagcaaaagtagaagaatttgaaattacagggacaaaatctaaatct-ttttt 24837487  T
Q  223 nnnaaagggactaaaactggaattcgctaatattacacggacaaaaaagaggtatttaccc 283  Q
       | |||||||||||||||||||||||||||||||| ||||  |||||||||||||||||    
T  24837488 tttacagggactaaaactggaattcgctaatattacagggac-gaaaagaggtatttaccc 24837547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 23 - 284
Target Start/End: Complemental strand, 17762540 - 17762282
Alignment:
Q  23 caccacgccagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatgaaat 122  Q
    |||||||  |||||||| |||||| |||  || |||||||||||||||||||||||| ||||| |||||| |||||||||||| ||||||||||||||||    
T  17762540 caccacgtaagcagaatttgcatacatgggacataaaatgagggaccaaaagtggaggaatctaaaattacagggaccaaaagcgggaggaatatgaaat 17762441  T
Q  123 tacaaggacgtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaatatcnnnnn 222  Q
    |||| |||||||||||||||||||| |||| || |||| ||||||| ||||||||||||||||||||||||||| ||  ||| ||| |||  |||         
T  17762440 tacagggacgtaatttatgcagattctgcttacgtgattaaaggagggaccaaaagtggaagaatctgaaattacaggaacaaaatataa--atcttttt 17762343  T
Q  223 nnnaaagggactaaaactggaattcgctaatattacacggacaaaaaagaggtatttaccct 284  Q
       | |||||||||||| ||||||||||||||||||| |||| |||||||||||||||||||    
T  17762342 tttacagggactaaaaccggaattcgctaatattacagggac-aaaaagaggtatttaccct 17762282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 23 - 284
Target Start/End: Complemental strand, 14144159 - 14143901
Alignment:
Q  23 caccacgccagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatgaaat 122  Q
    ||||||| || ||||||||||||| ||| |||||||||||||||||||||||||||| ||| |||||||| | ||||||||||||| |||||| ||||||    
T  14144159 caccacgtcaccagaatctgcatacatggcacgtaaaatgagggaccaaaagtggaggaatttgaaattacatggaccaaaagtggaaggaatctgaaat 14144060  T
Q  123 tacaaggacgtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaatatcnnnnn 222  Q
    |||| |||||||||||||||||||| | ||||| |||||||| |||  ||||||||||||||||| |||||||| ||  ||| |||||||  |||         
T  14144059 tacagggacgtaatttatgcagattctactgacgtgatgaaatgaggtaccaaaagtggaagaatatgaaattacagggacaaaatctaa--atcttttt 14143962  T
Q  223 nnnaaagggactaaaactggaattcgctaatattacacggacaaaaaagaggtatttaccct 284  Q
       | |||||||||||| ||||||||||||||||||| ||||  ||||||||||||||||||    
T  14143961 tttacagggactaaaaccggaattcgctaatattacagggac-gaaaagaggtatttaccct 14143901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 32 - 282
Target Start/End: Original strand, 41001482 - 41001729
Alignment:
Q  32 agcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatgaaattacaaggac 131  Q
    ||||||||||||||| ||| ||||||||||||||||| |||| ||||| |||||||||||| |||||||| |||||||||||| |||||||||||  |||    
T  41001482 agcagaatctgcatacatggcacgtaaaatgagggactaaaaatggaggaatctgaaattacagggaccagaagtgggaggaagatgaaattacagtgac 41001581  T
Q  132 gtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaatatcnnnnnnnnaaaggg 231  Q
     ||||||||| || || || ||||||||||||||||| ||||||||||||||||||||||||||||||  ||| |||||||  |||        | | ||    
T  41001582 ataatttatgtaggttctgttgacttgatgaaaggagggaccaaaagtggaagaatctgaaattatagggacaaaatctaa--atcttttttttacaagg 41001679  T
Q  232 actaaaactggaattcgctaatattacacggacaaaaaagaggtatttacc 282  Q
    |||||||| ||||||||||||||||||| |||| ||||| |||||||||||    
T  41001680 actaaaaccggaattcgctaatattacagggacgaaaaa-aggtatttacc 41001729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 23 - 214
Target Start/End: Original strand, 993867 - 994057
Alignment:
Q  23 caccacgccagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatgaaat 122  Q
    |||||||  ||||||||||||||| |||||||||||||||||||||||||||||||| ||| |||| ||| |||||||||||||||||||||| ||||||    
T  993867 caccacgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatatgaa-ttacagggaccaaaagtgggaggaatctgaaat 993965  T
Q  123 tacaaggacgtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaat 214  Q
    |||| ||||||||||||| |||||| || |||| |||| ||||||| ||||||||||||||||||||| ||||| ||  ||| |||||||||    
T  993966 tacagggacgtaatttatacagattctgttgacatgataaaaggagggaccaaaagtggaagaatctgcaattacagggacaaaatctaaat 994057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 19 - 214
Target Start/End: Original strand, 6817238 - 6817432
Alignment:
Q  19 atttcaccacgccagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatg 118  Q
    ||||||||||| |||||||||||||||| ||| |||||||||| ||||||||||| ||||| |||||||||||| ||  | |||||||||||||||| ||    
T  6817238 atttcaccacgtcagcagaatctgcatacatggcacgtaaaataagggaccaaaaatggaggaatctgaaattacaga-atcaaaagtgggaggaatttg 6817336  T
Q  119 aaattacaaggacgtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaat 214  Q
    |||||||| |||||||||||||||| ||| ||||||  ||||||||||||||||||||||||||||||| |||||||| ||  ||| |||||||||    
T  6817337 aaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggagtgaccaaaagtggaagaatatgaaattacagggacaaaatctaaat 6817432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 23 - 196
Target Start/End: Original strand, 4919110 - 4919283
Alignment:
Q  23 caccacgccagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatgaaat 122  Q
    |||||||  |||||||| |||||| |||  ||||||||||||||||||||||||||| ||| |||||||| || |||||||||| |||||||||||||||    
T  4919110 caccacgtaagcagaatttgcatacatggtacgtaaaatgagggaccaaaagtggaggaatttgaaattacagtgaccaaaagttggaggaatatgaaat 4919209  T
Q  123 tacaaggacgtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaatta 196  Q
    ||||||||||||||||||||| ||| || ||||||||||||||||| || ||||||| ||||||||||||||||    
T  4919210 tacaaggacgtaatttatgcatattctgttgacttgatgaaaggagggatcaaaagtagaagaatctgaaatta 4919283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 19 - 196
Target Start/End: Original strand, 20709328 - 20709505
Alignment:
Q  19 atttcaccacgccagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatg 118  Q
    ||||||||||| |||||||||||||||| ||| ||||||||||||||||| |||||||||| ||| |||||||| ||||| |||||||||||||||| ||    
T  20709328 atttcaccacgtcagcagaatctgcatacatggcacgtaaaatgagggacaaaaagtggaggaatatgaaattacagggatcaaaagtgggaggaatctg 20709427  T
Q  119 aaattacaaggacgtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaatta 196  Q
    |||||||| ||| |||||||||||| ||| ||||||  |||||||||||  ||| |||||||||||||| ||||||||    
T  20709428 aaattacagggatgtaatttatgcatattctgctgatgtgatgaaaggaaggacaaaaagtggaagaatatgaaatta 20709505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 23 - 196
Target Start/End: Original strand, 24650820 - 24650992
Alignment:
Q  23 caccacgccagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatgaaat 122  Q
    ||||||| ||||| |||||||||| ||| |||||||||||||||||||||| ||||| |||||||||||| |||||||||| ||||||| ||||||||||    
T  24650820 caccacgtcagcaaaatctgcatacatggcacgtaaaatgagggaccaaaaatggaggaatctgaaattacagggaccaaa-gtgggagaaatatgaaat 24650918  T
Q  123 tacaaggacgtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaatta 196  Q
    |||| ||| ||||||||||| |||| ||||||| |||||||||||| || ||||||||||||||||| ||||||    
T  24650919 tacagggatgtaatttatgcggattctgctgacgtgatgaaaggagggatcaaaagtggaagaatctaaaatta 24650992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 23 - 214
Target Start/End: Complemental strand, 29445064 - 29444873
Alignment:
Q  23 caccacgccagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatgaaat 122  Q
    ||||||| ||| | ||| |||||| ||||||||||||||||||||| |||| || || ||| |||||||| ||||||||||| | |||||||| ||||||    
T  29445064 caccacgtcagtaaaatttgcatacatgacacgtaaaatgagggacaaaaaatgtaggaatttgaaattacagggaccaaaactaggaggaatctgaaat 29444965  T
Q  123 tacaaggacgtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaat 214  Q
    |||| |||||||||||||||||||| ||||||| |||||||||||| |||||||||| ||||||| |||||||| |   |||||||||||||    
T  29444964 tacagggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtagaagaatatgaaattacaaggacataatctaaat 29444873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 19 - 141
Target Start/End: Complemental strand, 23979163 - 23979042
Alignment:
Q  19 atttcaccacgccagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatg 118  Q
    ||||||||||| |||||||||||||||| |||||||||||||||||| |||||| ||||||||||||||||||| |||||||||||||||||| ||||||    
T  23979163 atttcaccacgtcagcagaatctgcatacatgacacgtaaaatgagg-accaaacgtggagtaatctgaaattaaagggaccaaaagtgggagaaatatg 23979065  T
Q  119 aaattacaaggacgtaatttatg 141  Q
    |||||||||||||||||||||||    
T  23979064 aaattacaaggacgtaatttatg 23979042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 23 - 196
Target Start/End: Original strand, 31799760 - 31799933
Alignment:
Q  23 caccacgccagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatgaaat 122  Q
    |||||||  |||||||| || ||| ||| || ||||||||||||||||||||||||| | | |||||||| |||||||||||||||||||||| ||||||    
T  31799760 caccacgtaagcagaatttgtatacatggcatgtaaaatgagggaccaaaagtggaggattttgaaattacagggaccaaaagtgggaggaatctgaaat 31799859  T
Q  123 tacaaggacgtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaatta 196  Q
    || | |||||||||||||||| ||| ||||||| |||||||||||| || |||||| |||||||||||||||||    
T  31799860 taaagggacgtaatttatgcaaattctgctgacgtgatgaaaggagggatcaaaagaggaagaatctgaaatta 31799933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 93 - 284
Target Start/End: Complemental strand, 14411885 - 14411696
Alignment:
Q  93 gagggaccaaaagtgggaggaatatgaaattacaaggacgtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaa 192  Q
    ||||||||||||||||||||||| |||||||||| |||||||||||||||| ||| ||||||| |||||||||||| |||||||||||||||||||||||    
T  14411885 gagggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcaaattctgctgacgtgatgaaaggagggaccaaaagtggaagaatctgaa 14411786  T
Q  193 attatagatacataatctaaatatcnnnnnnnnaaagggactaaaactggaattcgctaatattacacggacaaaaaagaggtatttaccct 284  Q
    |||| | | ||| ||| ||||| |         | |||||||||||| ||||||||||||||||||| ||||  ||||||||||||||||||    
T  14411785 attacatagacaaaatataaatct-ttttttatacagggactaaaaccggaattcgctaatattacagggac-gaaaagaggtatttaccct 14411696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 32 - 283
Target Start/End: Complemental strand, 18336705 - 18336467
Alignment:
Q  32 agcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatgaaattacaaggac 131  Q
    |||||||| || ||| ||| |||||||||||||||||||||||||||| |||||||||||| ||||||            |||| |||||||||| ||||    
T  18336705 agcagaatttgtatacatgtcacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggac------------gaatctgaaattacagggac 18336618  T
Q  132 gtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaatatcnnnnnnnnaaaggg 231  Q
    |||||||||||| ||| ||||||  |||||||||||| || |||||| ||||||||||||||||| ||  ||| ||||||||| |         | ||||    
T  18336617 gtaatttatgcaaattctgctgatgtgatgaaaggagggatcaaaagcggaagaatctgaaattacagggacaaaatctaaatcttttttttttacaggg 18336518  T
Q  232 actaaaactggaattcgctaatattacacggacaaaaaagaggtatttaccc 283  Q
    |||||||  ||||||||||||||||| | ||||  ||||||| |||||||||    
T  18336517 actaaaatcggaattcgctaatattatagggac-gaaaagagatatttaccc 18336467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 93 - 214
Target Start/End: Original strand, 27159147 - 27159268
Alignment:
Q  93 gagggaccaaaagtgggaggaatatgaaattacaaggacgtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaa 192  Q
    |||||| |||||||||||||||| |||||||||| |||||||||||||||||||| ||||||| ||||||||| || |||||||| ||||||||| | ||    
T  27159147 gagggatcaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattctgctgacgtgatgaaagaagggaccaaaaatggaagaatataaa 27159246  T
Q  193 attatagatacataatctaaat 214  Q
    |||| ||  ||| |||||||||    
T  27159247 attacagggacaaaatctaaat 27159268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 53 - 196
Target Start/End: Original strand, 22571227 - 22571370
Alignment:
Q  53 acgtaaaatgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatgaaattacaaggacgtaatttatgcagattttgct 152  Q
    |||| ||||||||||||||||| |||  ||| ||||||||||||||||||| || |||||||  |||||||||| ||||||||||||||||||||||| |    
T  22571227 acgtgaaatgagggaccaaaagcggatgaatatgaaattagagggaccaaatgtaggaggaacctgaaattacagggacgtaatttatgcagattttgtt 22571326  T
Q  153 gacttgatgaaaggagtgaccaaaagtggaagaatctgaaatta 196  Q
    ||| || ||||| ||| || |||||   ||||||| ||||||||    
T  22571327 gacgtggtgaaatgagggagcaaaacgagaagaatttgaaatta 22571370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 138 - 284
Target Start/End: Complemental strand, 6817265 - 6817122
Alignment:
Q  138 tatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaatatcnnnnnnnnaaagggactaaa 237  Q
    |||||||||| ||||||| || ||||| ||| ||||||||||||||||||||||||||| |   |||||||||||  |||        | ||||||||||    
T  6817265 tatgcagattctgctgacgtggtgaaatgagggaccaaaagtggaagaatctgaaattacatggacataatctaa--atcttttttttacagggactaaa 6817168  T
Q  238 actggaattcgctaatattacacggacaaaaaagaggtatttaccct 284  Q
    || ||||||| ||||||||||| ||||  ||||||||||||||||||    
T  6817167 accggaattcactaatattacaaggac-gaaaagaggtatttaccct 6817122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 23 - 99
Target Start/End: Complemental strand, 14411924 - 14411847
Alignment:
Q  23 caccacgccagcagaatctgcatatatgacacgtaaaatgagggaccaaaagt-ggagtaatctgaaattagagggac 99  Q
    |||||||  |||||||||| |||| |||||||||||||||||||||||||||| |||| |||||||||||| ||||||    
T  14411924 caccacgtaagcagaatctacatacatgacacgtaaaatgagggaccaaaagtgggaggaatctgaaattacagggac 14411847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 138 - 283
Target Start/End: Original strand, 23979136 - 23979279
Alignment:
Q  138 tatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaatatcnnnnnnnnaaagggactaaa 237  Q
    |||||||||| ||||||| || ||||| ||| |||||||||||||||||| |||||||| ||  ||| ||||||||| |         | ||||||||||    
T  23979136 tatgcagattctgctgacgtggtgaaatgagggaccaaaagtggaagaatttgaaattacagggacaaaatctaaatct-ttttttttacagggactaaa 23979234  T
Q  238 actggaattcgctaatattacacggacaaaaaagaggtatttaccc 283  Q
    || ||||||||||||||||||| ||||  |||||||||||||||||    
T  23979235 accggaattcgctaatattacagggac-gaaaagaggtatttaccc 23979279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 138 - 214
Target Start/End: Complemental strand, 7126060 - 7125984
Alignment:
Q  138 tatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaat 214  Q
    |||||||||| ||||||| || || ||  || ||||||||||||||||||||||||||||||  ||| |||||||||    
T  7126060 tatgcagattctgctgacgtggtggaataagggaccaaaagtggaagaatctgaaattatagggacaaaatctaaat 7125984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 138 - 214
Target Start/End: Complemental strand, 20709355 - 20709279
Alignment:
Q  138 tatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaat 214  Q
    |||||||||| ||||||| || ||||| ||| |||||||||||||||||| |||||||| ||  ||| |||||||||    
T  20709355 tatgcagattctgctgacgtggtgaaatgagggaccaaaagtggaagaatttgaaattacagggacagaatctaaat 20709279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 160 - 269
Target Start/End: Complemental strand, 22571198 - 22571090
Alignment:
Q  160 tgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaatatcnnnnnnnnaaagggactaaaactggaattcgctaatattaca 259  Q
    ||||| ||| |||||||||||||||||| |||||||| ||| | ||||||||||| |         | |||||||||||  |||||||||||||||||||    
T  22571198 tgaaatgagggaccaaaagtggaagaatatgaaattacagagatataatctaaat-ttttttttttacagggactaaaatcggaattcgctaatattaca 22571100  T
Q  260 cggacaaaaa 269  Q
     |||||||||    
T  22571099 aggacaaaaa 22571090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 138 - 214
Target Start/End: Complemental strand, 24650843 - 24650767
Alignment:
Q  138 tatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaat 214  Q
    |||||||||||||||||| || || || |||  ||||||||||||||||| |||||||| ||  ||| |||||||||    
T  24650843 tatgcagattttgctgacgtggtggaatgagctaccaaaagtggaagaatatgaaattacaggaacaaaatctaaat 24650767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 284
Target Start/End: Complemental strand, 24837223 - 24837168
Alignment:
Q  228 agggactaaaactggaattcgctaatattacacggacaaaaaagaggtatttaccct 284  Q
    |||||||||||| ||||||||||| ||||||| ||||  ||||||||||||||||||    
T  24837223 agggactaaaaccggaattcgctattattacagggac-gaaaagaggtatttaccct 24837168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 59 - 103
Target Start/End: Complemental strand, 30512405 - 30512361
Alignment:
Q  59 aatgagggaccaaaagtggagtaatctgaaattagagggaccaaa 103  Q
    ||||||||||||||||||||  |||||||||||| ||||||||||    
T  30512405 aatgagggaccaaaagtggaaaaatctgaaattacagggaccaaa 30512361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 59 - 103
Target Start/End: Complemental strand, 30552745 - 30552701
Alignment:
Q  59 aatgagggaccaaaagtggagtaatctgaaattagagggaccaaa 103  Q
    ||||||||||||||||||||  |||||||||||| ||||||||||    
T  30552745 aatgagggaccaaaagtggaaaaatctgaaattacagggaccaaa 30552701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 230 - 269
Target Start/End: Original strand, 29445131 - 29445170
Alignment:
Q  230 ggactaaaactggaattcgctaatattacacggacaaaaa 269  Q
    |||||||||||||||||||||||||||||| |||| ||||    
T  29445131 ggactaaaactggaattcgctaatattacagggacgaaaa 29445170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 170 - 284
Target Start/End: Original strand, 17762549 - 17762661
Alignment:
Q  170 gaccaaaagtggaagaatctgaaattatagatacataatctaaatatcnnnnnnnnaaagggactaaaactggaattcgctaatattacacggacaaaaa 269  Q
    |||||||||||||||||||||||||||| |  ||| ||||||||| |         | ||||||||||||  ||||||||||||| |||| ||||  |||    
T  17762549 gaccaaaagtggaagaatctgaaattatggggacaaaatctaaatct-ttttttttacagggactaaaaccagaattcgctaatactacagggac-gaaa 17762646  T
Q  270 agaggtatttaccct 284  Q
    |||||||||||||||    
T  17762647 agaggtatttaccct 17762661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 284
Target Start/End: Original strand, 24651025 - 24651078
Alignment:
Q  230 ggactaaaactggaattcgctaatattacacggacaaaaaagaggtatttaccct 284  Q
    |||||||||| |||||||||||||||||||  |||  ||||||||||||||||||    
T  24651025 ggactaaaaccggaattcgctaatattacagagac-gaaaagaggtatttaccct 24651078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 138 - 196
Target Start/End: Complemental strand, 27159133 - 27159075
Alignment:
Q  138 tatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaatta 196  Q
    |||| ||||||||||||| || || ||  || |||||||||||||||||||||||||||    
T  27159133 tatgtagattttgctgacgtggtggaataagggaccaaaagtggaagaatctgaaatta 27159075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 284
Target Start/End: Original strand, 7126244 - 7126296
Alignment:
Q  231 gactaaaactggaattcgctaatattacacggacaaaaaagaggtatttaccct 284  Q
    ||||||||| ||||||||||||||||||| |||   ||||||||||||||||||    
T  7126244 gactaaaaccggaattcgctaatattacaggga-tgaaaagaggtatttaccct 7126296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 284
Target Start/End: Complemental strand, 27159042 - 27158990
Alignment:
Q  231 gactaaaactggaattcgctaatattacacggacaaaaaagaggtatttaccct 284  Q
    ||||||||||| ||||||||||||||||| ||||  |||||||||||| |||||    
T  27159042 gactaaaactgaaattcgctaatattacatggac-gaaaagaggtattaaccct 27158990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 283
Target Start/End: Complemental strand, 31799751 - 31799640
Alignment:
Q  170 gaccaaaagtggaagaatctgaaattatagatacataatctaaatatcnnnnnnnnaaagggactaaaactggaattcgctaatattacacggacaaaaa 269  Q
    ||||||||||||||||||||||||||| ||  ||| ||||||||| |         | ||||||| |||| ||||||||||||||||| | ||||  |||    
T  31799751 gaccaaaagtggaagaatctgaaattacagggacaaaatctaaatct-ttttttttacagggactgaaaccggaattcgctaatattatagggac-gaaa 31799654  T
Q  270 agaggtatttaccc 283  Q
    ||||||||||||||    
T  31799653 agaggtatttaccc 31799640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 160 - 196
Target Start/End: Original strand, 20947059 - 20947095
Alignment:
Q  160 tgaaaggagtgaccaaaagtggaagaatctgaaatta 196  Q
    ||||| ||||||||||||||||| |||||||||||||    
T  20947059 tgaaatgagtgaccaaaagtggaggaatctgaaatta 20947095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 52 - 99
Target Start/End: Original strand, 27159137 - 27159185
Alignment:
Q  52 cacgtaaaatgagggaccaaaagt-ggagtaatctgaaattagagggac 99  Q
    |||||||||||||||| ||||||| |||| |||||||||||| ||||||    
T  27159137 cacgtaaaatgagggatcaaaagtgggaggaatctgaaattacagggac 27159185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 142 - 194
Target Start/End: Complemental strand, 41424655 - 41424603
Alignment:
Q  142 cagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaat 194  Q
    |||||||||||||| || | ||| ||| ||| |||||||||||||||||||||    
T  41424655 cagattttgctgacatgtttaaatgagggactaaaagtggaagaatctgaaat 41424603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809 (Bit Score: 129; Significance: 1e-66; HSPs: 2)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 22 - 214
Target Start/End: Complemental strand, 1669 - 1477
Alignment:
Q  22 tcaccacgccagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatgaaa 121  Q
    |||||||  |||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| |||||    
T  1669 tcaccacatcagcagaatctgcatacatggcacgtaaaatgagggaccaaaagtggagtaatctgaaattacaaggaccaaaagtgggaggaatctgaaa 1570  T
Q  122 ttacaaggacgtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaat 214  Q
    ||| | |||||||||||||| ||||| ||||||| |||||||||||| ||||||||||||||||||||||||||| ||  |||||||||||||    
T  1569 ttatagggacgtaatttatgtagattctgctgacgtgatgaaaggagggaccaaaagtggaagaatctgaaattacagggacataatctaaat 1477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 285
Target Start/End: Original strand, 1730 - 1786
Alignment:
Q  228 agggactaaaactggaattcgctaatattacacggacaaaaaagaggtatttaccctc 285  Q
    |||||||||||| |||||||| |||||||||| ||||  |||||||| ||||||||||    
T  1730 agggactaaaaccggaattcgttaatattacagggac-gaaaagagggatttaccctc 1786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 125; Significance: 2e-64; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 23 - 284
Target Start/End: Complemental strand, 24732196 - 24731934
Alignment:
Q  23 caccacgccagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatgaaat 122  Q
    |||||||  ||||||||||||||| |||  ||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||| ||||||    
T  24732196 caccacgtaagcagaatctgcatacatggtacgtaaaatgagggaccaaaagtggaggaatctgaaattatagggaccaaaagtgggaggaatctgaaat 24732097  T
Q  123 tacaaggacgtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaa--atatcnnn 220  Q
    ||||||||||||||||||| ||||| || ||||||||||||||||| |||||||||| |||||||||||||||| ||  ||| |||||||   | |        
T  24732096 tacaaggacgtaatttatgtagattatgttgacttgatgaaaggagggaccaaaagtagaagaatctgaaattacagggacaaaatctaatttttttttt 24731997  T
Q  221 nnnnnaaagggactaaaactggaattcgctaatattacacggacaaaaaagaggtatttaccct 284  Q
         | |||||||||||| ||||||||||||||||||| ||||  ||||||||||||||||||    
T  24731996 tttttacagggactaaaaccggaattcgctaatattacagggac-gaaaagaggtatttaccct 24731934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 19 - 196
Target Start/End: Original strand, 30459017 - 30459194
Alignment:
Q  19 atttcaccacgccagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatg 118  Q
    ||||||||||| |||||||||||||||| ||||||||||||||||| || |||||||| | ||||||||||||| | |||||||||||||||||||| ||    
T  30459017 atttcaccacgtcagcagaatctgcatacatgacacgtaaaatgagagatcaaaagtgaaataatctgaaattacaaggaccaaaagtgggaggaatttg 30459116  T
Q  119 aaattacaaggacgtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaatta 196  Q
    |||||| | |||||||||||||| ||||| |||| || |||||||||||| ||||||||||| |||||||||||||||    
T  30459117 aaattatagggacgtaatttatggagattatgctaacgtgatgaaaggagagaccaaaagtgaaagaatctgaaatta 30459194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 23 - 283
Target Start/End: Complemental strand, 9481440 - 9481182
Alignment:
Q  23 caccacgccagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatgaaat 122  Q
    ||||||| ||||| ||| |||||| ||| |||| |||||||||||| |||| ||||| ||| |||||||| ||||||||||| | |||||||| ||||||    
T  9481440 caccacgtcagcaaaatttgcatacatggcacgcaaaatgagggacaaaaaatggaggaatttgaaattacagggaccaaaactaggaggaatctgaaat 9481341  T
Q  123 tacaaggacgtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaatatcnnnnn 222  Q
    |||| | |||||||||||||||||| ||||||| |||||||||||| |||||||| ||||||||| |||||||| ||  |||||||||||||  |         
T  9481340 tacaggaacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaattggaagaatatgaaattacagggacataatctaaat-ccttttt 9481242  T
Q  223 nnnaaagggactaaaactggaattcgctaatattacacggacaaaaaagaggtatttaccc 283  Q
       | |||||||||||| ||||||||||||||||||| ||||  |||||||||||||||||    
T  9481241 tttacagggactaaaaccggaattcgctaatattacagggac-gaaaagaggtatttaccc 9481182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 19 - 196
Target Start/End: Original strand, 10321846 - 10322024
Alignment:
Q  19 atttcaccacgccagcagaatctgcatatatgacacgtaaaatgagggaccaaaagt-ggagtaatctgaaattagagggaccaaaagtgggaggaatat 117  Q
    ||||||||||| |||||| ||||||||| ||| |||||||||| |||| | |||| | ||||||||||||||||| | | |||||||||||||||||| |    
T  10321846 atttcaccacgtcagcagtatctgcatacatggcacgtaaaataaggggctaaaaattggagtaatctgaaattacatgaaccaaaagtgggaggaatct 10321945  T
Q  118 gaaattacaaggacgtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaatta 196  Q
    |||||||||||||||||||||||||||||| ||||||| |||||||||||  ||||||||||| |||||||||||||||    
T  10321946 gaaattacaaggacgtaatttatgcagattctgctgacgtgatgaaaggaaggaccaaaagtgaaagaatctgaaatta 10322024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 23 - 214
Target Start/End: Complemental strand, 30618219 - 30618029
Alignment:
Q  23 caccacgccagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatgaaat 122  Q
    ||||||| ||||||||||| |||| ||| |||||||||||||||||||||||||||| ||| |||||||| || || |||||||||||| ||| ||||||    
T  30618219 caccacgtcagcagaatctacatacatggcacgtaaaatgagggaccaaaagtggaggaatttgaaattacagtgatcaaaagtgggag-aatctgaaat 30618121  T
Q  123 tacaaggacgtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaat 214  Q
    |||| |||||||||||||||||||| ||||||| |||| ||||||| |||||||||||||| ||| |||||||| ||  ||| |||||||||    
T  30618120 tacagggacgtaatttatgcagattctgctgacgtgataaaaggagggaccaaaagtggaacaatatgaaattacagggacaaaatctaaat 30618029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 32 - 198
Target Start/End: Original strand, 3229992 - 3230157
Alignment:
Q  32 agcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatgaaattacaaggac 131  Q
    ||||||||||||||| |||| || |||||||||||||||||||||||| ||| |||||||| | ||||||||||||||||||||||||||||||| ||||    
T  3229992 agcagaatctgcatacatgaaacataaaatgagggaccaaaagtggaggaatatgaaattacaaggaccaaaagtgggaggaatatgaaattacagggac 3230091  T
Q  132 gtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattata 198  Q
    || ||||||||||||| || |||| |||||||| || |||||||||||| |||||| ||||||||||    
T  3230092 gtgatttatgcagattctgttgacgtgatgaaaaga-tgaccaaaagtgaaagaatatgaaattata 3230157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 23 - 195
Target Start/End: Original strand, 26385398 - 26385566
Alignment:
Q  23 caccacgccagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatgaaat 122  Q
    |||||||  ||||||||||| ||| ||| |||||||||||||||||||||||||||| |||||||||||| ||||||||||| |||||||||||||||||    
T  26385398 caccacgtaagcagaatctgtatacatggcacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggaccaaaactgggaggaatatgaaat 26385497  T
Q  123 tacaaggacgtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaatt 195  Q
    |||| |||||| ||||||||| |||    ||||||||||||||||| |||||||||||||||||| |||||||    
T  26385498 tacagggacgt-atttatgcatatt---atgacttgatgaaaggagagaccaaaagtggaagaatatgaaatt 26385566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 23 - 196
Target Start/End: Original strand, 2299430 - 2299602
Alignment:
Q  23 caccacgccagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatgaaat 122  Q
    |||||||  |||||||| || ||| ||| |||||||||||||||||||||||||| | ||||| |||||| | |||||||||||||||||||| |||||     
T  2299430 caccacgtaagcagaatatgtatacatggcacgtaaaatgagggaccaaaagtggcggaatctaaaattacaaggaccaaaagtgggaggaatctgaaa- 2299528  T
Q  123 tacaaggacgtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaatta 196  Q
    |||| |||||||||||||||||||| || ||||||||||||||||| ||  |||||||||||||||||||||||    
T  2299529 tacagggacgtaatttatgcagattctgttgacttgatgaaaggagggataaaaagtggaagaatctgaaatta 2299602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 23 - 147
Target Start/End: Original strand, 33714607 - 33714731
Alignment:
Q  23 caccacgccagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatgaaat 122  Q
    |||||||  ||||||||||||||| |||  ||||||||||||||||||||||||||| |||||||||||| || ||||||||||| ||||||| ||||||    
T  33714607 caccacgtaagcagaatctgcatacatggtacgtaaaatgagggaccaaaagtggaggaatctgaaattacagagaccaaaagtgagaggaatctgaaat 33714706  T
Q  123 tacaaggacgtaatttatgcagatt 147  Q
    |||||||||||||||||||||||||    
T  33714707 tacaaggacgtaatttatgcagatt 33714731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 19 - 195
Target Start/End: Original strand, 14680998 - 14681174
Alignment:
Q  19 atttcaccacgccagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatg 118  Q
    ||||||||||| |||||||||||||||| ||||||||| ||| ||| |||||||||||||| |||||||||||| | |||||||||||| ||| ||| ||    
T  14680998 atttcaccacgtcagcagaatctgcatacatgacacgtgaaaagagagaccaaaagtggagaaatctgaaattatatggaccaaaagtgagagtaatctg 14681097  T
Q  119 aaattacaaggacgtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaatt 195  Q
    |||||||| ||||||||| | |||||||| | ||||| |  | |||  || ||||||||||||| |||||| |||||    
T  14681098 aaattacagggacgtaatatgtgcagattctactgacgtagttaaataagggaccaaaagtggaggaatctaaaatt 14681174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 93 - 196
Target Start/End: Complemental strand, 33637747 - 33637644
Alignment:
Q  93 gagggaccaaaagtgggaggaatatgaaattacaaggacgtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaa 192  Q
    ||||||||||||||||||||||| |||||||||| ||||||||| |||||||||| ||||||| | |||||||||| |||||||||||||||||||| ||    
T  33637747 gagggaccaaaagtgggaggaatctgaaattacagggacgtaatctatgcagattctgctgacgtaatgaaaggagggaccaaaagtggaagaatctaaa 33637648  T
Q  193 atta 196  Q
    ||||    
T  33637647 atta 33637644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 63 - 196
Target Start/End: Original strand, 18500506 - 18500640
Alignment:
Q  63 agggaccaaaagtggagtaatctgaaa-ttagagggaccaaaagtgggaggaatatgaaattacaaggacgtaatttatgcagattttgctgacttgatg 161  Q
    ||||||||||||||||| ||||| ||| ||| ||||||||||||||| | | || |||||||||| |||| ||||||||||||||| || || |||||||    
T  18500506 agggaccaaaagtggaggaatctaaaaattacagggaccaaaagtggaaaggatctgaaattacagggacataatttatgcagattctgttgccttgatg 18500605  T
Q  162 aaaggagtgaccaaaagtggaagaatctgaaatta 196  Q
    ||||||| |||||||||||||||||||| ||||||    
T  18500606 aaaggagggaccaaaagtggaagaatctaaaatta 18500640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 93 - 284
Target Start/End: Original strand, 32017695 - 32017882
Alignment:
Q  93 gagggaccaaaagtgggaggaatatgaaattacaaggacgtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaa 192  Q
    |||||||||||||||| |||||| |||||||||| ||| |||||||||||| |||  |||||| |||||||||||| |||||||||||||||||| ||||    
T  32017695 gagggaccaaaagtgg-aggaatttgaaattacagggatgtaatttatgcatattccgctgacgtgatgaaaggagggaccaaaagtggaagaatatgaa 32017793  T
Q  193 attatagatacataatctaaatatcnnnnnnnnaaagggactaaaactggaattcgctaatattacacggacaaaaaagaggtatttaccct 284  Q
    |||| ||  ||| |||||||  |||        | |||||||||||| ||||||||||||||||||| ||||  ||||||| ||||||||||    
T  32017794 attacagggacaaaatctaa--atcttttttttacagggactaaaaccggaattcgctaatattacagggac-gaaaagagatatttaccct 32017882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 23 - 98
Target Start/End: Original strand, 32017656 - 32017731
Alignment:
Q  23 caccacgccagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagaggga 98  Q
    ||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| ||| |||||||| |||||    
T  32017656 caccacgtcagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatttgaaattacaggga 32017731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 63 - 145
Target Start/End: Original strand, 17142798 - 17142880
Alignment:
Q  63 agggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatgaaattacaaggacgtaatttatgcaga 145  Q
    ||||||||||||||||| |||||||||||| |||||||||||||| ||||||| |||||||||| |||| |||||||| ||||    
T  17142798 agggaccaaaagtggaggaatctgaaattacagggaccaaaagtgagaggaatctgaaattacagggacctaatttatacaga 17142880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 23 - 108
Target Start/End: Original strand, 18500434 - 18500520
Alignment:
Q  23 caccacgccagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatct-gaaattagagggaccaaaagtgg 108  Q
    |||||||  ||||||||||||||| |||||||||||||||||||||||||||||||| |||||  |||||| |||||||||||||||    
T  18500434 caccacgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctaaaaattacagggaccaaaagtgg 18500520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 23 - 99
Target Start/End: Complemental strand, 33637786 - 33637709
Alignment:
Q  23 caccacgccagcagaatctgcatatatgacacgtaaaatgagggaccaaaagt-ggagtaatctgaaattagagggac 99  Q
    ||||||| |||||||||||||||| || ||||||||||||||||||||||||| |||| |||||||||||| ||||||    
T  33637786 caccacgtcagcagaatctgcatacataacacgtaaaatgagggaccaaaagtgggaggaatctgaaattacagggac 33637709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 138 - 196
Target Start/End: Original strand, 9854122 - 9854180
Alignment:
Q  138 tatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaatta 196  Q
    |||||||||||||||||| || ||||| ||| |||||||||||||||||| ||||||||    
T  9854122 tatgcagattttgctgacgtggtgaaatgagggaccaaaagtggaagaatatgaaatta 9854180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 152 - 214
Target Start/End: Complemental strand, 19284258 - 19284196
Alignment:
Q  152 tgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaat 214  Q
    |||| |||||||||||| ||||||||||||||||||||||||||| ||  ||| |||||||||    
T  19284258 tgacatgatgaaaggagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaat 19284196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 138 - 214
Target Start/End: Complemental strand, 30459044 - 30458968
Alignment:
Q  138 tatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaat 214  Q
    |||||||||| ||||||| || ||||| ||| ||| |||||| |||||||||||||||| ||  |||||||||||||    
T  30459044 tatgcagattctgctgacgtggtgaaatgagagactaaaagttgaagaatctgaaattacagtgacataatctaaat 30458968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 138 - 214
Target Start/End: Complemental strand, 14681025 - 14680949
Alignment:
Q  138 tatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaat 214  Q
    |||||||||| ||||||| || ||||| ||  |||||||||||||||||| |||||||| | | ||| |||||||||    
T  14681025 tatgcagattctgctgacgtggtgaaatgaaggaccaaaagtggaagaatatgaaattacaaagacaaaatctaaat 14680949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 230 - 282
Target Start/End: Complemental strand, 19284181 - 19284130
Alignment:
Q  230 ggactaaaactggaattcgctaatattacacggacaaaaaagaggtatttacc 282  Q
    |||||||||||||||||||||||||||||| | ||  ||||||||||||||||    
T  19284181 ggactaaaactggaattcgctaatattacatgaac-gaaaagaggtatttacc 19284130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 138 - 284
Target Start/End: Complemental strand, 18500457 - 18500314
Alignment:
Q  138 tatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaatatcnnnnnnnnaaagggactaaa 237  Q
    |||||||||| |||| || || || || ||| |||||||||||||||||| |||||||| ||  ||| |||||||||  |        | ||||||||||    
T  18500457 tatgcagattctgcttacgtggtggaatgagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaat--ctttttcttacagggactaaa 18500360  T
Q  238 actggaattcgctaatattacacggacaaaaaagaggtatttaccct 284  Q
    || | ||||||||||||||| | ||||  ||||||||||||||||||    
T  18500359 accgaaattcgctaatattatagggac-gaaaagaggtatttaccct 18500314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 138 - 196
Target Start/End: Original strand, 9481417 - 9481475
Alignment:
Q  138 tatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaatta 196  Q
    |||||| ||||||||||| || || ||  || |||||||||||||||||||||||||||    
T  9481417 tatgcaaattttgctgacgtggtggaataagggaccaaaagtggaagaatctgaaatta 9481475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 160 - 214
Target Start/End: Complemental strand, 17142798 - 17142744
Alignment:
Q  160 tgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaat 214  Q
    ||||| ||| |||||||||||||||||| |||||||| ||  |||||||||||||    
T  17142798 tgaaacgagagaccaaaagtggaagaatttgaaattacagggacataatctaaat 17142744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 284
Target Start/End: Original strand, 18500655 - 18500708
Alignment:
Q  230 ggactaaaactggaattcgctaatattacacggacaaaaaagaggtatttaccct 284  Q
    |||||||||| | ||||||||||||||||| ||||  ||||||||||||||||||    
T  18500655 ggactaaaaccgaaattcgctaatattacagggac-gaaaagaggtatttaccct 18500708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 269
Target Start/End: Complemental strand, 10321787 - 10321746
Alignment:
Q  228 agggactaaaactggaattcgctaatattacacggacaaaaa 269  Q
    |||||||||||| ||||||||||||||||||| |||| ||||    
T  10321787 agggactaaaaccggaattcgctaatattacagggacgaaaa 10321746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 214
Target Start/End: Original strand, 15942410 - 15942447
Alignment:
Q  177 agtggaagaatctgaaattatagatacataatctaaat 214  Q
    ||||||||||| |||||||||||| |||||||||||||    
T  15942410 agtggaagaatatgaaattatagagacataatctaaat 15942447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 289
Target Start/End: Original strand, 24732273 - 24732321
Alignment:
Q  240 tggaattcgctaatattacacggacaaaaaagaggtatttaccctctatt 289  Q
    |||||||||||||||||||| ||||  |||||||||||||||||| ||||    
T  24732273 tggaattcgctaatattacagggac-gaaaagaggtatttaccctttatt 24732321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 228 - 280
Target Start/End: Original strand, 26385598 - 26385649
Alignment:
Q  228 agggactaaaactggaattcgctaatattacacggacaaaaaagaggtattta 280  Q
    |||||||||||  ||||||||||||||||||| ||||  ||||||||||||||    
T  26385598 agggactaaaatcggaattcgctaatattacagggac-gaaaagaggtattta 26385649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 122; Significance: 2e-62; HSPs: 2)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 23 - 284
Target Start/End: Complemental strand, 4821 - 4561
Alignment:
Q  23 caccacgccagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatgaaat 122  Q
    |||||||  ||||||||||||||| |||  ||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||| ||||||    
T  4821 caccacgtaagcagaatctgcatacatggtacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggaccaaaagtgggaggaatctgaaat 4722  T
Q  123 tacaaggacgtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaatatcnnnnn 222  Q
    |||| |||||||||||||||||||| || ||||||||| ||||||| |||||||||| ||||||||| |||||| ||  ||| ||| ||||| |          
T  4721 tacacggacgtaatttatgcagattctgttgacttgataaaaggagggaccaaaagtagaagaatctcaaattacagggacaaaatttaaatcttttttt 4622  T
Q  223 nnnaaagggactaaaactggaattcgctaatattacacggacaaaaaagaggtatttaccct 284  Q
       | |||||||||||  ||||||||||||||||||| ||||  ||||||||||||||||||    
T  4621 tttacagggactaaaatcggaattcgctaatattacaaggac-gaaaagaggtatttaccct 4561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 228 - 284
Target Start/End: Original strand, 4886 - 4941
Alignment:
Q  228 agggactaaaactggaattcgctaatattacacggacaaaaaagaggtatttaccct 284  Q
    ||||| |||||| |||||| |||||||||||| ||||  ||||||||||||||||||    
T  4886 agggattaaaaccggaatttgctaatattacagggac-gaaaagaggtatttaccct 4941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 109; Significance: 9e-55; HSPs: 3)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 23 - 191
Target Start/End: Complemental strand, 8580 - 8413
Alignment:
Q  23 caccacgccagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatgaaat 122  Q
    ||||||| |||||||||||||||| |||||||||||||||||| ||||||| ||||| |||||||||||| | |||||||||||||||||||| ||||||    
T  8580 caccacgtcagcagaatctgcatacatgacacgtaaaatgagg-accaaaaatggaggaatctgaaattacaaggaccaaaagtgggaggaatctgaaat 8482  T
Q  123 tacaaggacgtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctga 191  Q
    |||| |||||||||| |||||||||||| |||| |||||||||||| ||||||||||| ||||||||||    
T  8481 tacagggacgtaattgatgcagattttgttgacgtgatgaaaggagagaccaaaagtgaaagaatctga 8413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 138 - 269
Target Start/End: Original strand, 8557 - 8687
Alignment:
Q  138 tatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaatatcnnnnnnnnaaagggactaaa 237  Q
    |||||||||| ||||||| || || || ||| |||||||||||||||||||| |||||| ||  ||| ||||||||| |         ||||||||||||    
T  8557 tatgcagattctgctgacgtggtggaatgagggaccaaaagtggaagaatctaaaattacagggacaaaatctaaatct-ttttttttaaagggactaaa 8655  T
Q  238 actggaattcgctaatattacacggacaaaaa 269  Q
    || |||||||||||||||| || | |||||||    
T  8656 accggaattcgctaatattgcaggaacaaaaa 8687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 229 - 284
Target Start/End: Complemental strand, 8378 - 8324
Alignment:
Q  229 gggactaaaactggaattcgctaatattacacggacaaaaaagaggtatttaccct 284  Q
    ||||||||||| | ||||||||||||||||| ||||  ||||||||||||||||||    
T  8378 gggactaaaaccgaaattcgctaatattacagggac-gaaaagaggtatttaccct 8324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185 (Bit Score: 106; Significance: 5e-53; HSPs: 2)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 19 - 216
Target Start/End: Original strand, 3985 - 4182
Alignment:
Q  19 atttcaccacgccagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatg 118  Q
    ||||||||| | |||||||||||||| | ||| || ||||||||||||||||||||||||| ||| |||||||| || ||||||||||||||||||| ||    
T  3985 atttcaccatgtcagcagaatctgcacacatggcaagtaaaatgagggaccaaaagtggaggaatatgaaattacagtgaccaaaagtgggaggaatctg 4084  T
Q  119 aaattacaaggacgtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaatat 216  Q
    ||||||||  ||| ||||||||||||||| ||||||| |||||||||||| |||||||| || ||||||||||||||| |   |||||||||||||||    
T  4085 aaattacagagacataatttatgcagattctgctgacgtgatgaaaggagggaccaaaaatgaaagaatctgaaattacaacaacataatctaaatat 4182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 140 - 284
Target Start/End: Complemental strand, 4010 - 3868
Alignment:
Q  140 tgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaatatcnnnnnnnnaaagggactaaaac 239  Q
    |||||||| ||||||| || ||||| ||| |||||| ||||||||||| |||||||| ||  ||||||||||||| |         | ||||||||||||    
T  4010 tgcagattctgctgacatggtgaaatgagcgaccaacagtggaagaatttgaaattacagggacataatctaaatct-ttttttttacagggactaaaac 3912  T
Q  240 tggaattcgctaatattacacggacaaaaaagaggtatttaccct 284  Q
     ||||||||||||||||||| ||||  ||||||| ||||||||||    
T  3911 cggaattcgctaatattacagggac-gaaaagagatatttaccct 3868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0881 (Bit Score: 89; Significance: 7e-43; HSPs: 1)
Name: scaffold0881
Description:

Target: scaffold0881; HSP #1
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 32 - 196
Target Start/End: Original strand, 349 - 512
Alignment:
Q  32 agcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatgaaattacaaggac 131  Q
    |||||||| |||||| |||  ||||||||||||||||||||||| ||| |||||||||||| |||||||||||  ||||||||| ||||||||||| |||    
T  349 agcagaatttgcatacatggtacgtaaaatgagggaccaaaagtagaggaatctgaaattacagggaccaaaatcgggaggaatctgaaattacaa-gac 447  T
Q  132 gtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaatta 196  Q
    |||||||||||||||| ||||||  |||| |||||||  ||||||||||||| ||||||||||||    
T  448 gtaatttatgcagattctgctgatgtgattaaaggagataccaaaagtggaataatctgaaatta 512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0449 (Bit Score: 88; Significance: 3e-42; HSPs: 2)
Name: scaffold0449
Description:

Target: scaffold0449; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 93 - 284
Target Start/End: Original strand, 7389 - 7579
Alignment:
Q  93 gagggaccaaaagtgggaggaatatgaaattacaaggacgtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaa 192  Q
    |||||||||||||||| |||||| |||||||||||||| ||||||||||||||||||| ||||||||||||||||  |||||||||| ||||||||||||    
T  7389 gagggaccaaaagtggtaggaatctgaaattacaaggatgtaatttatgcagattttgttgacttgatgaaaggatagaccaaaagtagaagaatctgaa 7488  T
Q  193 attatagatacataatctaaatatcnnnnnnnnaaagggactaaaactggaattcgctaatattacacggacaaaaaagaggtatttaccct 284  Q
    |||| ||  ||| ||||||||| |         | |||||||||||| ||||||||||||||||||| ||||  |||| |||||||||||||    
T  7489 attacagggacaaaatctaaatcttttttttttacagggactaaaaccggaattcgctaatattacagggac-gaaaataggtatttaccct 7579  T

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Target: scaffold0449; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 92
Target Start/End: Original strand, 7367 - 7420
Alignment:
Q  40 ctgcatatatgacacgtaaaatgagggaccaaaagtgg-agtaatctgaaatta 92  Q
    ||||||| |||  ||||||||||||||||||||||||| || ||||||||||||    
T  7367 ctgcatacatggtacgtaaaatgagggaccaaaagtggtaggaatctgaaatta 7420  T

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Target: scaffold0176 (Bit Score: 59; Significance: 6e-25; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 70 - 196
Target Start/End: Original strand, 15800 - 15925
Alignment:
Q  70 aaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatgaaattacaaggacgtaatttatgcagattttgctgacttgatgaaaggagt 169  Q
    |||||| ||| ||| |||||||| || ||||||||||||||||||| ||||||||||  |   ||||||||||||||| ||||||| ||||||||||||     
T  15800 aaaagttgaggaatttgaaattacagagaccaaaagtgggaggaatctgaaattacagcgta-taatttatgcagattctgctgacgtgatgaaaggaga 15898  T
Q  170 gaccaaaagtggaagaatctgaaatta 196  Q
    ||||||||||| |||||| ||||||||    
T  15899 gaccaaaagtgaaagaatatgaaatta 15925  T

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Target: scaffold0176; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 284
Target Start/End: Original strand, 15955 - 16007
Alignment:
Q  231 gactaaaactggaattcgctaatattacacggacaaaaaagaggtatttaccct 284  Q
    ||||||||| ||||||||||||||||||| ||||  ||||||| ||||||||||    
T  15955 gactaaaaccggaattcgctaatattacatggac-gaaaagagatatttaccct 16007  T

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Target: scaffold0117 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 138 - 278
Target Start/End: Original strand, 12217 - 12355
Alignment:
Q  138 tatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattatagatacataatctaaatatcnnnnnnnnaaagggactaaa 237  Q
    |||||||||| ||||||| |||||||||||  ||||||||||||||||||||||||||| ||  ||| ||||||||| |         | ||||||||||    
T  12217 tatgcagattctgctgacgtgatgaaaggatggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatct-ttttttttatagggactaaa 12315  T
Q  238 actggaattcgctaatattacacggacaaaaaagaggtatt 278  Q
    || ||||||||||||||||||| ||||  ||||||||||||    
T  12316 accggaattcgctaatattacagggac-gaaaagaggtatt 12355  T

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Target: scaffold0352 (Bit Score: 37; Significance: 0.000000000008; HSPs: 3)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 228 - 284
Target Start/End: Complemental strand, 4721 - 4666
Alignment:
Q  228 agggactaaaactggaattcgctaatattacacggacaaaaaagaggtatttaccct 284  Q
    ||||||||||||||||||||||||||||| || ||||  ||||||||||||||||||    
T  4721 agggactaaaactggaattcgctaatattgcagggac-taaaagaggtatttaccct 4666  T

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Target: scaffold0352; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 63 - 99
Target Start/End: Complemental strand, 4781 - 4745
Alignment:
Q  63 agggaccaaaagtggagtaatctgaaattagagggac 99  Q
    ||||||||||||||||| |||||||||||| ||||||    
T  4781 agggaccaaaagtggaggaatctgaaattacagggac 4745  T

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Target: scaffold0352; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 228 - 284
Target Start/End: Original strand, 6003 - 6058
Alignment:
Q  228 agggactaaaactggaattcgctaatattacacggacaaaaaagaggtatttaccct 284  Q
    |||||||||||  |||||||||||||||| || ||||  ||||||||||||||||||    
T  6003 agggactaaaatcggaattcgctaatattgcagggac-caaaagaggtatttaccct 6058  T

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Target: scaffold0477 (Bit Score: 35; Significance: 0.0000000001; HSPs: 3)
Name: scaffold0477
Description:

Target: scaffold0477; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 77
Target Start/End: Complemental strand, 5006 - 4952
Alignment:
Q  23 caccacgccagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtgg 77  Q
    |||||||  |||||||||| |||| ||| ||||||||||||||||||||||||||    
T  5006 caccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaaaagtgg 4952  T

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Target: scaffold0477; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 284
Target Start/End: Complemental strand, 4932 - 4879
Alignment:
Q  230 ggactaaaactggaattcgctaatattacacggacaaaaaagaggtatttaccct 284  Q
    |||||||||| | ||||||||||||||||| |||  |||||||||||||||||||    
T  4932 ggactaaaaccgaaattcgctaatattaca-ggaacaaaaagaggtatttaccct 4879  T

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Target: scaffold0477; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 93 - 131
Target Start/End: Complemental strand, 4967 - 4929
Alignment:
Q  93 gagggaccaaaagtgggaggaatatgaaattacaaggac 131  Q
    ||||||||||||||||||| |||||||||||||| ||||    
T  4967 gagggaccaaaagtgggagaaatatgaaattacatggac 4929  T

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Target: scaffold0157 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 257
Target Start/End: Original strand, 226 - 255
Alignment:
Q  228 agggactaaaactggaattcgctaatatta 257  Q
    ||||||||||||||||||||||||||||||    
T  226 agggactaaaactggaattcgctaatatta 255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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