View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8438_low_44 (Length: 224)
Name: NF8438_low_44
Description: NF8438
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8438_low_44 |
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Alignment Details
Target: chr7 (Bit Score: 181; Significance: 6e-98; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 181; E-Value: 6e-98
Query Start/End: Original strand, 18 - 210
Target Start/End: Original strand, 36297524 - 36297716
Alignment:
| Q |
18 |
agttatccctcaaaaaatttaactaggaaaatgtacatttgctaaaccacaattttcttgccgttttcatagagtacaatgctgatgtttggtgacagcg |
117 |
Q |
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| T |
36297524 |
agttatcactcaaaaaatttaactaggaaaatgtacatttgctaaaccacaattttcttgccgttttcatagagtacaatgctgatgtttggtgacagtg |
36297623 |
T |
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| Q |
118 |
tgaacgcaaaatcttaccagaataaagaaatagacgaaaaatcataccagaattcaataaatggatgcagattctgtctgtagtcaagagaat |
210 |
Q |
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| T |
36297624 |
taaacgcaaaatcttaccagaataaagaaatagacgaaaaatcataccagaattcaataaatggatgcagattctgtctgtagtcaagagaat |
36297716 |
T |
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