View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8438_low_45 (Length: 217)
Name: NF8438_low_45
Description: NF8438
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8438_low_45 |
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Alignment Details
Target: chr1 (Bit Score: 156; Significance: 5e-83; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 35 - 206
Target Start/End: Original strand, 22391150 - 22391321
Alignment:
| Q |
35 |
aacctgtgtcaagaatcaaagaacttttctcaataagaacagacgtagtgtatgaaataatctgtccttcaacatgagaagatcctagatagcaagaaca |
134 |
Q |
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| T |
22391150 |
aacctgtgtcaagaatcaaagaacttttctcaataagaacagacgtagtgtatgaaataatctgtcctccaacatgagaagatcctagatagcaagaaca |
22391249 |
T |
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| Q |
135 |
cttgtttcacaattatcccattatctcggtgatgtagaagacacaactgcaacttgtatctgatgatgtcca |
206 |
Q |
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| T |
22391250 |
cttgtttcacgattatcccattatctcggtgatgtagaagacacaactgcaacttgtatcagaggatgtcca |
22391321 |
T |
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