View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8443_high_10 (Length: 279)
Name: NF8443_high_10
Description: NF8443
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8443_high_10 |
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Alignment Details
Target: chr8 (Bit Score: 250; Significance: 1e-139; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 10 - 263
Target Start/End: Original strand, 45443149 - 45443402
Alignment:
| Q |
10 |
gcagagaggcttcccattgacatgtaatcataaacaaggagcttctcatccctgctgaaatagtaagctcttagaggtaccaaactctgatgatctatag |
109 |
Q |
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| T |
45443149 |
gcagagaggcttcccattgacatgtaatcataaacaaggagcttctcatccctgctgaaatagtaagctcttagaggtaccaaactctgatgatctatag |
45443248 |
T |
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| Q |
110 |
ctcctaccgcttcaatcttctctctgaactccttctcagttattgtcacatccttcaaccttttcaccgctactaccggccctgactccaaaactgcctt |
209 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
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| T |
45443249 |
ctcctaccgcttcaatcttctctctgaactccttctcagttattgtcacatccttcaaccttttcaccgctactacaggccctgactccaaaactgcctt |
45443348 |
T |
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| Q |
210 |
ataagccgtgccaaacgtccctttacccaacacctccgccgaagccctcaacag |
263 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45443349 |
ataagccgtgccaaacgtccctttacccaacacctccgccgaagccctcaacag |
45443402 |
T |
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