View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8443_high_8 (Length: 303)

Name: NF8443_high_8
Description: NF8443
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8443_high_8
NF8443_high_8
[»] chr6 (34 HSPs)
chr6 (1-302)||(11321200-11321500)
chr6 (128-176)||(34489465-34489513)
chr6 (140-270)||(606360-606500)
chr6 (134-270)||(12170624-12170770)
chr6 (196-266)||(9341511-9341581)
chr6 (128-184)||(127917-127973)
chr6 (140-176)||(679379-679415)
chr6 (128-172)||(4088728-4088772)
chr6 (202-270)||(29255312-29255380)
chr6 (140-184)||(33052962-33053006)
chr6 (133-270)||(34018716-34018863)
chr6 (183-270)||(23128774-23128861)
chr6 (126-185)||(24590354-24590413)
chr6 (133-185)||(25337820-25337874)
chr6 (183-266)||(30493692-30493775)
chr6 (133-176)||(31297079-31297122)
chr6 (149-184)||(31984394-31984429)
chr6 (196-270)||(14174931-14175005)
chr6 (196-270)||(14179467-14179541)
chr6 (126-184)||(32327000-32327058)
chr6 (128-177)||(19164823-19164872)
chr6 (197-270)||(20226007-20226080)
chr6 (197-270)||(22119991-22120064)
chr6 (263-296)||(23128683-23128716)
chr6 (149-182)||(31987008-31987041)
chr6 (140-177)||(34185488-34185525)
chr6 (151-183)||(2488547-2488579)
chr6 (147-183)||(8644632-8644668)
chr6 (151-183)||(8693335-8693367)
chr6 (146-174)||(10552408-10552436)
chr6 (128-184)||(21426468-21426524)
chr6 (263-295)||(29255438-29255470)
chr6 (196-240)||(30776849-30776893)
chr6 (140-176)||(31851675-31851711)
[»] chr5 (32 HSPs)
chr5 (128-270)||(10722915-10723068)
chr5 (140-270)||(6011932-6012072)
chr5 (133-270)||(8096286-8096432)
chr5 (183-270)||(11976782-11976869)
chr5 (128-177)||(4771113-4771162)
chr5 (125-270)||(13007383-13007538)
chr5 (202-270)||(14211381-14211449)
chr5 (183-270)||(34945547-34945634)
chr5 (184-270)||(2979154-2979240)
chr5 (126-176)||(8087993-8088043)
chr5 (140-270)||(9113519-9113659)
chr5 (128-185)||(41418194-41418250)
chr5 (140-176)||(13422190-13422226)
chr5 (263-302)||(13421990-13422029)
chr5 (128-183)||(17218127-17218182)
chr5 (183-270)||(38597951-38598038)
chr5 (204-266)||(16981461-16981523)
chr5 (196-266)||(27266699-27266769)
chr5 (200-270)||(39567424-39567494)
chr5 (128-169)||(781661-781702)
chr5 (183-228)||(11875576-11875621)
chr5 (128-169)||(19259577-19259618)
chr5 (140-270)||(24229578-24229718)
chr5 (128-177)||(27576150-27576199)
chr5 (128-185)||(35475103-35475160)
chr5 (147-183)||(5378706-5378742)
chr5 (140-176)||(8984783-8984819)
chr5 (140-184)||(14082190-14082234)
chr5 (133-169)||(35851062-35851098)
chr5 (147-183)||(40775165-40775201)
chr5 (206-270)||(41630656-41630720)
chr5 (128-184)||(42505055-42505110)
[»] chr3 (49 HSPs)
chr3 (140-270)||(48650528-48650668)
chr3 (196-270)||(33580034-33580108)
chr3 (196-270)||(47041908-47041982)
chr3 (140-184)||(20464759-20464803)
chr3 (194-270)||(42460903-42460979)
chr3 (140-270)||(628718-628857)
chr3 (133-184)||(46304308-46304359)
chr3 (183-245)||(7448761-7448823)
chr3 (183-245)||(7456903-7456965)
chr3 (200-270)||(51303507-51303577)
chr3 (140-270)||(21533603-21533743)
chr3 (133-182)||(23799735-23799784)
chr3 (128-270)||(45568227-45568379)
chr3 (140-270)||(52922911-52923051)
chr3 (140-176)||(3085085-3085121)
chr3 (128-184)||(37041018-37041074)
chr3 (133-176)||(16235695-16235737)
chr3 (183-270)||(21431767-21431854)
chr3 (128-266)||(35175562-35175709)
chr3 (203-270)||(40487479-40487546)
chr3 (135-185)||(24396288-24396338)
chr3 (147-177)||(28876883-28876913)
chr3 (184-270)||(38142679-38142765)
chr3 (204-270)||(38859980-38860046)
chr3 (130-176)||(41818484-41818530)
chr3 (128-174)||(50194118-50194164)
chr3 (127-169)||(50611182-50611224)
chr3 (128-169)||(32607737-32607778)
chr3 (128-177)||(40487582-40487631)
chr3 (128-177)||(42455603-42455651)
chr3 (128-169)||(44907164-44907205)
chr3 (196-245)||(46304380-46304429)
chr3 (140-169)||(51202041-51202070)
chr3 (196-229)||(51487277-51487310)
chr3 (183-271)||(6954543-6954631)
chr3 (202-270)||(8914866-8914934)
chr3 (128-184)||(9998717-9998773)
chr3 (140-172)||(17238070-17238102)
chr3 (202-270)||(21289680-21289748)
chr3 (151-183)||(21803935-21803967)
chr3 (147-183)||(27831502-27831538)
chr3 (133-169)||(29503729-29503765)
chr3 (147-183)||(33076689-33076725)
chr3 (147-183)||(36623931-36623967)
chr3 (140-176)||(38546057-38546093)
chr3 (140-184)||(43017138-43017182)
chr3 (151-183)||(46926808-46926840)
chr3 (140-176)||(47041842-47041878)
chr3 (214-270)||(52115899-52115955)
[»] chr2 (61 HSPs)
chr2 (140-270)||(29173512-29173652)
chr2 (128-270)||(25508851-25509003)
chr2 (128-176)||(14416435-14416483)
chr2 (140-270)||(4100501-4100635)
chr2 (184-270)||(4041443-4041529)
chr2 (196-270)||(12554042-12554116)
chr2 (204-270)||(14955694-14955760)
chr2 (196-270)||(18763633-18763707)
chr2 (135-185)||(30923247-30923297)
chr2 (140-270)||(1415722-1415862)
chr2 (187-268)||(19028766-19028847)
chr2 (202-270)||(10237083-10237151)
chr2 (140-266)||(4228294-4228427)
chr2 (203-270)||(18107618-18107685)
chr2 (133-239)||(28037283-28037396)
chr2 (183-270)||(28533802-28533889)
chr2 (183-270)||(29279418-29279505)
chr2 (196-270)||(7646643-7646717)
chr2 (204-270)||(37994449-37994515)
chr2 (128-266)||(24461612-24461756)
chr2 (123-184)||(36175290-36175351)
chr2 (128-270)||(38445331-38445483)
chr2 (133-174)||(39284334-39284375)
chr2 (202-270)||(1421841-1421909)
chr2 (128-184)||(4903928-4903984)
chr2 (140-176)||(32448412-32448448)
chr2 (140-184)||(37876401-37876445)
chr2 (189-245)||(41712622-41712678)
chr2 (183-270)||(4778918-4779005)
chr2 (183-270)||(11985081-11985168)
chr2 (128-270)||(17248931-17249082)
chr2 (133-176)||(21612507-21612550)
chr2 (133-184)||(31193124-31193175)
chr2 (140-268)||(35220495-35220633)
chr2 (196-270)||(5427730-5427804)
chr2 (196-270)||(36692039-36692113)
chr2 (140-169)||(7015488-7015517)
chr2 (151-184)||(10286678-10286711)
chr2 (147-184)||(11550340-11550377)
chr2 (140-177)||(12553964-12554001)
chr2 (133-174)||(15750184-15750225)
chr2 (263-296)||(19062345-19062378)
chr2 (128-169)||(21570173-21570214)
chr2 (128-169)||(27949701-27949742)
chr2 (140-270)||(31788621-31788761)
chr2 (128-177)||(34480375-34480423)
chr2 (133-182)||(34962642-34962690)
chr2 (128-169)||(38575251-38575292)
chr2 (140-177)||(41328007-41328044)
chr2 (147-183)||(4878408-4878444)
chr2 (264-296)||(7646547-7646579)
chr2 (146-182)||(8809544-8809580)
chr2 (147-183)||(12366272-12366308)
chr2 (140-176)||(14955809-14955845)
chr2 (147-183)||(15920278-15920314)
chr2 (147-183)||(18141155-18141191)
chr2 (210-270)||(19598004-19598064)
chr2 (140-172)||(26025273-26025305)
chr2 (194-270)||(30399888-30399964)
chr2 (128-184)||(36692135-36692191)
chr2 (140-176)||(37994552-37994588)
[»] chr8 (48 HSPs)
chr8 (140-269)||(30568113-30568252)
chr8 (195-270)||(23230800-23230875)
chr8 (183-270)||(45445656-45445743)
chr8 (188-270)||(37971440-37971522)
chr8 (128-177)||(2120561-2120610)
chr8 (205-270)||(29617141-29617206)
chr8 (202-270)||(41896674-41896742)
chr8 (140-270)||(15344465-15344606)
chr8 (140-270)||(15433530-15433671)
chr8 (140-270)||(15524834-15524975)
chr8 (196-270)||(25190923-25190997)
chr8 (196-270)||(31013466-31013540)
chr8 (131-181)||(31975185-31975235)
chr8 (128-174)||(34680653-34680699)
chr8 (197-270)||(5046910-5046983)
chr8 (140-185)||(44099713-44099758)
chr8 (128-184)||(9637189-9637245)
chr8 (202-270)||(18890563-18890631)
chr8 (182-270)||(39646032-39646120)
chr8 (183-270)||(16928602-16928689)
chr8 (133-184)||(19443838-19443889)
chr8 (183-270)||(33347366-33347453)
chr8 (135-174)||(34610110-34610149)
chr8 (141-183)||(7579517-7579559)
chr8 (128-174)||(12654336-12654382)
chr8 (140-270)||(17693405-17693546)
chr8 (204-270)||(27110331-27110397)
chr8 (195-245)||(33299049-33299099)
chr8 (204-266)||(34611978-34612040)
chr8 (196-270)||(43833854-43833928)
chr8 (147-184)||(9799685-9799722)
chr8 (140-185)||(19876460-19876505)
chr8 (264-297)||(36948428-36948461)
chr8 (140-176)||(1236490-1236526)
chr8 (148-176)||(3028408-3028436)
chr8 (147-183)||(5457475-5457511)
chr8 (151-183)||(5526227-5526259)
chr8 (197-249)||(8412381-8412433)
chr8 (140-176)||(10331346-10331382)
chr8 (141-177)||(15596946-15596982)
chr8 (206-266)||(23851344-23851404)
chr8 (140-184)||(27498158-27498202)
chr8 (147-183)||(28296783-28296819)
chr8 (147-183)||(31712748-31712784)
chr8 (134-182)||(33214457-33214505)
chr8 (141-177)||(35141661-35141697)
chr8 (140-184)||(40211092-40211136)
chr8 (140-176)||(40618865-40618901)
[»] chr7 (39 HSPs)
chr7 (183-270)||(40993314-40993401)
chr7 (133-184)||(25286975-25287026)
chr7 (140-270)||(48316613-48316746)
chr7 (140-270)||(34899401-34899541)
chr7 (128-185)||(35261552-35261609)
chr7 (133-185)||(20083593-20083645)
chr7 (128-184)||(28407700-28407756)
chr7 (125-184)||(12141086-12141145)
chr7 (196-270)||(45349659-45349733)
chr7 (124-266)||(13592271-13592419)
chr7 (140-185)||(17611646-17611691)
chr7 (197-270)||(19297027-19297100)
chr7 (196-268)||(39328653-39328725)
chr7 (133-185)||(40741821-40741873)
chr7 (128-184)||(46700287-46700343)
chr7 (133-270)||(48061579-48061726)
chr7 (134-177)||(3267005-3267048)
chr7 (196-267)||(25255387-25255458)
chr7 (128-183)||(30992480-30992534)
chr7 (183-270)||(38798938-38799025)
chr7 (263-293)||(5000021-5000051)
chr7 (151-184)||(9137816-9137849)
chr7 (197-270)||(9449998-9450071)
chr7 (147-184)||(10574789-10574826)
chr7 (128-169)||(35666997-35667038)
chr7 (133-174)||(37849105-37849146)
chr7 (128-169)||(45198798-45198839)
chr7 (151-183)||(6667820-6667852)
chr7 (140-184)||(9977004-9977048)
chr7 (133-177)||(15123664-15123707)
chr7 (209-249)||(22751727-22751767)
chr7 (147-183)||(26017332-26017368)
chr7 (140-184)||(28044550-28044594)
chr7 (196-244)||(28476409-28476457)
chr7 (147-183)||(32312925-32312961)
chr7 (133-169)||(32684939-32684975)
chr7 (133-169)||(34773982-34774018)
chr7 (147-183)||(34893511-34893547)
chr7 (133-169)||(42311549-42311585)
[»] chr4 (58 HSPs)
chr4 (140-270)||(53811203-53811333)
chr4 (183-270)||(43853618-43853705)
chr4 (196-270)||(12199554-12199627)
chr4 (133-269)||(56156435-56156575)
chr4 (128-270)||(2520954-2521106)
chr4 (140-270)||(19853306-19853446)
chr4 (128-270)||(43510371-43510523)
chr4 (194-270)||(17949182-17949258)
chr4 (194-270)||(17953034-17953110)
chr4 (140-266)||(25274062-25274195)
chr4 (183-270)||(36161886-36161973)
chr4 (184-270)||(9714085-9714171)
chr4 (204-270)||(11299878-11299944)
chr4 (140-174)||(35395458-35395492)
chr4 (205-270)||(33921229-33921294)
chr4 (128-177)||(43095911-43095960)
chr4 (140-176)||(6155003-6155039)
chr4 (140-184)||(13634386-13634430)
chr4 (185-225)||(55228188-55228228)
chr4 (133-270)||(56040433-56040580)
chr4 (183-270)||(9178528-9178615)
chr4 (133-219)||(19896411-19896506)
chr4 (133-184)||(21662708-21662759)
chr4 (133-184)||(21671472-21671523)
chr4 (133-184)||(22611461-22611512)
chr4 (133-184)||(26633458-26633509)
chr4 (183-270)||(35348482-35348569)
chr4 (128-266)||(46990896-46991041)
chr4 (128-174)||(28857681-28857727)
chr4 (133-183)||(43157181-43157231)
chr4 (204-266)||(44947591-44947653)
chr4 (128-169)||(9645289-9645330)
chr4 (147-176)||(31891073-31891102)
chr4 (263-296)||(32766598-32766631)
chr4 (128-185)||(45418764-45418821)
chr4 (128-169)||(53616415-53616456)
chr4 (147-183)||(2945542-2945578)
chr4 (140-184)||(4142558-4142602)
chr4 (207-267)||(6153380-6153440)
chr4 (151-183)||(8712933-8712965)
chr4 (140-176)||(9048953-9048989)
chr4 (194-262)||(9145749-9145817)
chr4 (140-184)||(10258695-10258739)
chr4 (140-184)||(12493603-12493647)
chr4 (202-270)||(18935957-18936025)
chr4 (140-184)||(21686036-21686080)
chr4 (147-183)||(24100558-24100594)
chr4 (151-183)||(27091133-27091165)
chr4 (133-177)||(27360027-27360071)
chr4 (202-270)||(31891153-31891221)
chr4 (202-270)||(32766689-32766757)
chr4 (145-185)||(32952540-32952580)
chr4 (140-176)||(36162001-36162037)
chr4 (202-270)||(36194883-36194951)
chr4 (147-183)||(38169832-38169868)
chr4 (147-183)||(38943817-38943853)
chr4 (147-183)||(44374949-44374985)
chr4 (147-183)||(56236491-56236527)
[»] scaffold0884 (1 HSPs)
scaffold0884 (183-270)||(1820-1907)
[»] scaffold0050 (1 HSPs)
scaffold0050 (183-270)||(65889-65976)
[»] chr1 (56 HSPs)
chr1 (128-270)||(24583304-24583455)
chr1 (183-248)||(13144659-13144724)
chr1 (129-177)||(10776244-10776292)
chr1 (202-270)||(34412958-34413026)
chr1 (183-270)||(34878125-34878212)
chr1 (140-268)||(49504389-49504527)
chr1 (135-270)||(11462271-11462416)
chr1 (196-270)||(21687536-21687610)
chr1 (184-270)||(21947466-21947552)
chr1 (140-185)||(41081481-41081526)
chr1 (133-270)||(4413272-4413419)
chr1 (128-184)||(14872893-14872949)
chr1 (140-176)||(15836280-15836316)
chr1 (196-240)||(16162016-16162060)
chr1 (140-184)||(26535590-26535634)
chr1 (140-184)||(27456743-27456787)
chr1 (140-184)||(44915893-44915937)
chr1 (183-270)||(7337510-7337597)
chr1 (197-248)||(27579989-27580040)
chr1 (183-270)||(31317894-31317981)
chr1 (128-183)||(33486677-33486732)
chr1 (183-270)||(35484238-35484325)
chr1 (140-266)||(48217608-48217741)
chr1 (204-270)||(7836664-7836730)
chr1 (196-270)||(16989529-16989603)
chr1 (138-176)||(24583211-24583249)
chr1 (187-245)||(27872929-27872987)
chr1 (204-270)||(34529232-34529298)
chr1 (204-270)||(44543430-44543496)
chr1 (141-170)||(1602368-1602397)
chr1 (197-270)||(5983994-5984067)
chr1 (121-245)||(11454129-11454260)
chr1 (184-249)||(16263040-16263105)
chr1 (128-169)||(18569076-18569117)
chr1 (264-293)||(28053709-28053738)
chr1 (147-184)||(38646987-38647024)
chr1 (263-296)||(44915706-44915739)
chr1 (133-225)||(45805599-45805698)
chr1 (137-185)||(799626-799674)
chr1 (189-269)||(5600924-5601004)
chr1 (125-169)||(7342997-7343041)
chr1 (147-183)||(8893696-8893732)
chr1 (147-183)||(12967407-12967443)
chr1 (147-183)||(23257492-23257528)
chr1 (147-183)||(26771510-26771546)
chr1 (151-183)||(28666483-28666515)
chr1 (133-169)||(31130363-31130399)
chr1 (133-169)||(32676905-32676941)
chr1 (147-183)||(34659315-34659351)
chr1 (133-169)||(35584393-35584429)
chr1 (202-270)||(36775576-36775644)
chr1 (140-184)||(36894202-36894246)
chr1 (147-183)||(46589552-46589588)
chr1 (140-176)||(47133164-47133200)
chr1 (202-270)||(48750343-48750411)
chr1 (147-183)||(49652239-49652275)
[»] scaffold0014 (1 HSPs)
scaffold0014 (128-185)||(201138-201195)
[»] scaffold0445 (1 HSPs)
scaffold0445 (183-270)||(1499-1586)
[»] scaffold0136 (1 HSPs)
scaffold0136 (183-270)||(9889-9976)
[»] scaffold0022 (1 HSPs)
scaffold0022 (133-245)||(83207-83325)
[»] scaffold0154 (1 HSPs)
scaffold0154 (128-170)||(25546-25588)
[»] scaffold0088 (1 HSPs)
scaffold0088 (188-270)||(50931-51013)
[»] scaffold0049 (1 HSPs)
scaffold0049 (128-177)||(71082-71131)
[»] scaffold0039 (1 HSPs)
scaffold0039 (140-185)||(53195-53240)
[»] scaffold0888 (1 HSPs)
scaffold0888 (202-270)||(1544-1612)
[»] scaffold0603 (2 HSPs)
scaffold0603 (202-270)||(7870-7938)
scaffold0603 (140-184)||(7978-8022)
[»] scaffold0219 (1 HSPs)
scaffold0219 (133-185)||(14659-14710)
[»] scaffold0157 (1 HSPs)
scaffold0157 (140-184)||(26830-26874)
[»] scaffold0146 (1 HSPs)
scaffold0146 (140-172)||(16097-16129)
[»] scaffold0121 (1 HSPs)
scaffold0121 (128-184)||(31056-31112)


Alignment Details
Target: chr6 (Bit Score: 262; Significance: 1e-146; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 1 - 302
Target Start/End: Original strand, 11321200 - 11321500
Alignment:
Q  1 caagatagtggtggacttttttctttaaaactttgtcacaaatcagaatttagaactattttaatcacaatagagttggaacctttggtgaaatagcatt 100  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  11321200 caagatagtggtggacttttttctttaaaactgtgtcacaaatcagaatttttaactattttaatcacaatagagttggaacctttggtgaaatagcatt 11321299  T
Q  101 caccttttaagttaagttttattatacttttatttttataaaaacaaaatgatatttattcattcaaattgatagagcacatcatcgttaaagatgtaaa 200  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| |||||    
T  11321300 caccttt-aagttaagttttattatacttttatttttataaaaacaaaacgatatttattcattcaaattgatagagtacatcatcgttaaagacgtaaa 11321398  T
Q  201 tggtgaatctgcgaacaaattcacaacacataagttaataacataaaacaatacaatgcctacaaataattgattgaatttgtaattgactgatgtccat 300  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||    
T  11321399 tggtgaatctgcgaacaaattcacaacacataagttaataacataaaacagtacaatgcctacaaataattgattgaatttgtaattgactgatgtcgat 11321498  T
Q  301 ct 302  Q
    ||    
T  11321499 ct 11321500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 128 - 176
Target Start/End: Complemental strand, 34489513 - 34489465
Alignment:
Q  128 ttttatttttataaaaacaaaatgatatttattcattcaaattgataga 176  Q
    |||| ||||||||||||||||||||||||||||||||||||| ||||||    
T  34489513 ttttttttttataaaaacaaaatgatatttattcattcaaatcgataga 34489465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 140 - 270
Target Start/End: Complemental strand, 606500 - 606360
Alignment:
Q  140 aaaaacaaaatgatatttattcattcaaattgatagagcacat----------catcgttaaagatgtaaatggtgaatctgcgaacaaattcacaacac 229  Q
    ||||||||||||||||| |||||||||||| ||||||| ||||          |||||||||| | ||||| |||||||||||||||||| ||||| |||    
T  606500 aaaaacaaaatgatattcattcattcaaatcgatagagtacatcagatacaaacatcgttaaaaacgtaaagggtgaatctgcgaacaaactcacagcac 606401  T
Q  230 ataagttaataacataaaacaatacaatgcctacaaataat 270  Q
      ||||||||| |||| ||    | ||||||||||||||||    
T  606400 ccaagttaatagcatacaatggcaaaatgcctacaaataat 606360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 134 - 270
Target Start/End: Complemental strand, 12170770 - 12170624
Alignment:
Q  134 ttttataaaaacaaaatgatatttattcattcaaattgatagagcacatca----------tcgttaaagatgtaaatggtgaatctgcgaacaaattca 223  Q
    ||||| |||||||||| |||||| |||||||||||| ||||||| ||||||          ||| |||| ||||||| ||||||| ||||| |||| |||    
T  12170770 ttttacaaaaacaaaacgatattcattcattcaaatcgatagagtacatcagatacaaacatcgctaaaaatgtaaagggtgaatatgcgagcaaactca 12170671  T
Q  224 caacacataagttaataacataaaacaatacaatgcctacaaataat 270  Q
    || |||  ||||||||| |||| ||||  | ||||||||||||||||    
T  12170670 cagcacccaagttaatagcatacaacagcaaaatgcctacaaataat 12170624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 196 - 266
Target Start/End: Original strand, 9341511 - 9341581
Alignment:
Q  196 gtaaatggtgaatctgcgaacaaattcacaacacataagttaataacataaaacaatacaatgcctacaaa 266  Q
    ||||| |||||||||||||||||| |||||||||  ||||||||| |||| ||| | | ||||||||||||    
T  9341511 gtaaagggtgaatctgcgaacaaactcacaacacccaagttaatagcatacaacgacaaaatgcctacaaa 9341581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 128 - 184
Target Start/End: Complemental strand, 127973 - 127917
Alignment:
Q  128 ttttatttttataaaaacaaaatgatatttattcattcaaattgatagagcacatca 184  Q
    |||| |||||| ||||| |||| ||||||| ||||||||||||||||||| ||||||    
T  127973 ttttttttttacaaaaataaaacgatatttgttcattcaaattgatagagtacatca 127917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 140 - 176
Target Start/End: Complemental strand, 679415 - 679379
Alignment:
Q  140 aaaaacaaaatgatatttattcattcaaattgataga 176  Q
    |||||||||||| ||||||||||||||||||||||||    
T  679415 aaaaacaaaatgttatttattcattcaaattgataga 679379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 128 - 172
Target Start/End: Complemental strand, 4088772 - 4088728
Alignment:
Q  128 ttttatttttataaaaacaaaatgatatttattcattcaaattga 172  Q
    |||| |||||| ||||||||||||||||| |||||||||||||||    
T  4088772 ttttttttttacaaaaacaaaatgatattcattcattcaaattga 4088728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 270
Target Start/End: Original strand, 29255312 - 29255380
Alignment:
Q  202 ggtgaatctgcgaacaaattcacaacacataagttaataacataaaacaatacaatgcctacaaataat 270  Q
    |||||||||| ||||||| |||||||||  ||||||||| |||| |||| |  ||||||||||||||||    
T  29255312 ggtgaatctgtgaacaaactcacaacacccaagttaatagcatacaacagtgaaatgcctacaaataat 29255380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 140 - 184
Target Start/End: Original strand, 33052962 - 33053006
Alignment:
Q  140 aaaaacaaaatgatatttattcattcaaattgatagagcacatca 184  Q
    |||||||||| |||||| |||||||||||||||||||| ||||||    
T  33052962 aaaaacaaaacgatattcattcattcaaattgatagagtacatca 33053006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 133 - 270
Target Start/End: Complemental strand, 34018863 - 34018716
Alignment:
Q  133 tttttataaaaacaaaatgatatttattcattcaaattgatagagcacat----------catcgttaaagatgtaaatggtgaatctgcgaacaaattc 222  Q
    |||| |||||||||||| |||||| ||||||| |||||||||||| | ||          ||||| |||| | ||||||||| |||||||  ||||| ||    
T  34018863 ttttgataaaaacaaaacgatattcattcatttaaattgatagagtatattagatacaaacatcgctaaaaacgtaaatggtaaatctgcagacaaactc 34018764  T
Q  223 acaacacataagttaataacataaaacaatacaatgcctacaaataat 270  Q
    |||||||  ||| |||||| ||| |||| || ||||||||||||||||    
T  34018763 acaacacccaagataataatatacaacagtaaaatgcctacaaataat 34018716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 183 - 270
Target Start/End: Complemental strand, 23128861 - 23128774
Alignment:
Q  183 catcgttaaagatgtaaatggtgaatctgcgaacaaattcacaacacataagttaataacataaaacaatacaatgcctacaaataat 270  Q
    ||||| |||| ||||||| |||||||||||||||||| ||||| |||  || |||||| |||| |||   | ||||||||||||||||    
T  23128861 catcgctaaaaatgtaaagggtgaatctgcgaacaaactcacagcacccaaattaatagcatacaacggcaaaatgcctacaaataat 23128774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 24590354 - 24590413
Alignment:
Q  126 acttttatttttataaaaacaaaatgatatttattcattcaaattgatagagcacatcat 185  Q
    |||||| |||||| ||||| ||||| ||||||||||||||| |||||| ||| |||||||    
T  24590354 acttttttttttacaaaaataaaatcatatttattcattcatattgattgagtacatcat 24590413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 133 - 185
Target Start/End: Complemental strand, 25337874 - 25337820
Alignment:
Q  133 tttttataaaaacaaaatga--tatttattcattcaaattgatagagcacatcat 185  Q
    |||||| |||||||||||||  |||||||||||||||||| |||||| |||||||    
T  25337874 tttttacaaaaacaaaatgagatatttattcattcaaattaatagagtacatcat 25337820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 183 - 266
Target Start/End: Complemental strand, 30493775 - 30493692
Alignment:
Q  183 catcgttaaagatgtaaatggtgaatctgcgaacaaattcacaacacataagttaataacataaaacaatacaatgcctacaaa 266  Q
    ||||| |||| | ||||| ||||||||||||||||||||||||||||  | ||||||| |||| |||   | ||||||||||||    
T  30493775 catcgctaaaaacgtaaagggtgaatctgcgaacaaattcacaacacccaggttaatagcatacaacggcaaaatgcctacaaa 30493692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 133 - 176
Target Start/End: Complemental strand, 31297122 - 31297079
Alignment:
Q  133 tttttataaaaacaaaatgatatttattcattcaaattgataga 176  Q
    |||||| |||||||||| |||||| |||||||||||||||||||    
T  31297122 tttttacaaaaacaaaacgatattcattcattcaaattgataga 31297079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 149 - 184
Target Start/End: Complemental strand, 31984429 - 31984394
Alignment:
Q  149 atgatatttattcattcaaattgatagagcacatca 184  Q
    ||||||||||||||||||||||||||||| ||||||    
T  31984429 atgatatttattcattcaaattgatagagtacatca 31984394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 196 - 270
Target Start/End: Original strand, 14174931 - 14175005
Alignment:
Q  196 gtaaatggtgaatctgcgaacaaattcacaacacataagttaataacataaaacaatacaatgcctacaaataat 270  Q
    ||||| |||||||||||||||||| ||||| |||  ||||||| | ||||||||   | ||||||||||||||||    
T  14174931 gtaaaaggtgaatctgcgaacaaactcacatcactcaagttaacagcataaaacggaaaaatgcctacaaataat 14175005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 196 - 270
Target Start/End: Original strand, 14179467 - 14179541
Alignment:
Q  196 gtaaatggtgaatctgcgaacaaattcacaacacataagttaataacataaaacaatacaatgcctacaaataat 270  Q
    ||||| |||||||||||||||||| ||||| |||  ||||||| | ||||||||   | ||||||||||||||||    
T  14179467 gtaaaaggtgaatctgcgaacaaactcacatcactcaagttaacagcataaaacggaaaaatgcctacaaataat 14179541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 126 - 184
Target Start/End: Original strand, 32327000 - 32327058
Alignment:
Q  126 acttttatttttataaaaacaaaatgatatttattcattcaaattgatagagcacatca 184  Q
    |||||| |||| | |||||||||| |||||| |||||||||||| ||||||| ||||||    
T  32327000 actttttttttgacaaaaacaaaacgatattcattcattcaaatcgatagagtacatca 32327058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 177
Target Start/End: Complemental strand, 19164872 - 19164823
Alignment:
Q  128 ttttatttttataaaaacaaaatgatatttattcattcaaattgatagag 177  Q
    |||| |||||| |||||||||| |||||| ||||||||||||| ||||||    
T  19164872 ttttttttttacaaaaacaaaacgatattcattcattcaaattcatagag 19164823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 197 - 270
Target Start/End: Complemental strand, 20226080 - 20226007
Alignment:
Q  197 taaatggtgaatctgcgaacaaattcacaacacataagttaataacataaaacaatacaatgcctacaaataat 270  Q
    |||||| ||||| |||||||||| |||||| ||  ||||||||| |||| ||| | | ||||||||||||||||    
T  20226080 taaatgatgaatttgcgaacaaactcacaatacccaagttaatagcatacaacgacaaaatgcctacaaataat 20226007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 197 - 270
Target Start/End: Complemental strand, 22120064 - 22119991
Alignment:
Q  197 taaatggtgaatctgcgaacaaattcacaacacataagttaataacataaaacaatacaatgcctacaaataat 270  Q
    |||||| ||||| |||||||||| |||||| ||  ||||||||| |||| ||| | | ||||||||||||||||    
T  22120064 taaatgatgaatttgcgaacaaactcacaatacccaagttaatagcatacaacgacaaaatgcctacaaataat 22119991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 263 - 296
Target Start/End: Complemental strand, 23128716 - 23128683
Alignment:
Q  263 caaataattgattgaatttgtaattgactgatgt 296  Q
    ||||| ||||||||||||||||||||||||||||    
T  23128716 caaatcattgattgaatttgtaattgactgatgt 23128683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 149 - 182
Target Start/End: Complemental strand, 31987041 - 31987008
Alignment:
Q  149 atgatatttattcattcaaattgatagagcacat 182  Q
    ||||||||||||||||||||||||||||| ||||    
T  31987041 atgatatttattcattcaaattgatagaggacat 31987008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 177
Target Start/End: Original strand, 34185488 - 34185525
Alignment:
Q  140 aaaaacaaaatgatatttattcattcaaattgatagag 177  Q
    ||||| ||||||||||| ||||||||||||||||||||    
T  34185488 aaaaataaaatgatattcattcattcaaattgatagag 34185525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 183
Target Start/End: Complemental strand, 2488579 - 2488547
Alignment:
Q  151 gatatttattcattcaaattgatagagcacatc 183  Q
    ||||||||||||||||||||||||||| |||||    
T  2488579 gatatttattcattcaaattgatagagtacatc 2488547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 147 - 183
Target Start/End: Complemental strand, 8644668 - 8644632
Alignment:
Q  147 aaatgatatttattcattcaaattgatagagcacatc 183  Q
    |||||||||| |||||||||||||||||||| |||||    
T  8644668 aaatgatattaattcattcaaattgatagagtacatc 8644632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 183
Target Start/End: Original strand, 8693335 - 8693367
Alignment:
Q  151 gatatttattcattcaaattgatagagcacatc 183  Q
    ||||||||||||||||||||||||||| |||||    
T  8693335 gatatttattcattcaaattgatagagtacatc 8693367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 146 - 174
Target Start/End: Complemental strand, 10552436 - 10552408
Alignment:
Q  146 aaaatgatatttattcattcaaattgata 174  Q
    |||||||||||||||||||||||||||||    
T  10552436 aaaatgatatttattcattcaaattgata 10552408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 128 - 184
Target Start/End: Original strand, 21426468 - 21426524
Alignment:
Q  128 ttttatttttataaaaacaaaatgatatttattcattcaaattgatagagcacatca 184  Q
    |||| |||| |||||||||| | |||||| |||||||||||| ||||||| ||||||    
T  21426468 tttttttttgataaaaacaacacgatattcattcattcaaatcgatagagtacatca 21426524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 263 - 295
Target Start/End: Original strand, 29255438 - 29255470
Alignment:
Q  263 caaataattgattgaatttgtaattgactgatg 295  Q
    ||||| |||||||||||||||||||||||||||    
T  29255438 caaatcattgattgaatttgtaattgactgatg 29255470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 240
Target Start/End: Complemental strand, 30776893 - 30776849
Alignment:
Q  196 gtaaatggtgaatctgcgaacaaattcacaacacataagttaata 240  Q
    ||||| |||||||||||||||||| |||||||||  |||||||||    
T  30776893 gtaaagggtgaatctgcgaacaaactcacaacacccaagttaata 30776849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 176
Target Start/End: Original strand, 31851675 - 31851711
Alignment:
Q  140 aaaaacaaaatgatatttattcattcaaattgataga 176  Q
    ||||||||||| ||||| |||||||||||||||||||    
T  31851675 aaaaacaaaataatattcattcattcaaattgataga 31851711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 47; Significance: 7e-18; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 128 - 270
Target Start/End: Complemental strand, 10723068 - 10722915
Alignment:
Q  128 ttttattttt-ataaaaacaaaatgatatttattcattcaaattgatagagcacatca----------tcgttaaagatgtaaatggtgaatctgcgaac 216  Q
    |||||||||| | |||||||||| ||||||||||||||||||||||| ||| ||||||          ||| |||| ||||||||||||||||| |||||    
T  10723068 ttttatttttgacaaaaacaaaacgatatttattcattcaaattgatcgagtacatcaaatacaaatatcgctaaaaatgtaaatggtgaatctacgaac 10722969  T
Q  217 aaattcacaacacataagttaataacataaaacaatacaatgcctacaaataat 270  Q
    ||| |||||||||  |||||||||||||| | |   | ||||||||||||||||    
T  10722968 aaactcacaacactcaagttaataacatacagcggaaaaatgcctacaaataat 10722915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 140 - 270
Target Start/End: Original strand, 6011932 - 6012072
Alignment:
Q  140 aaaaacaaaatgatatttattcattcaaattgatagagcacatca----------tcgttaaagatgtaaatggtgaatctgcgaacaaattcacaacac 229  Q
    |||||||||| |||||| |||||||||||| ||||||| ||||||          |||||||| | ||||| |||||||||||||||||| ||||| |||    
T  6011932 aaaaacaaaacgatattcattcattcaaatcgatagagtacatcagatacaaacatcgttaaaaacgtaaagggtgaatctgcgaacaaactcacatcac 6012031  T
Q  230 ataagttaataacataaaacaatacaatgcctacaaataat 270  Q
      ||||||||| ||||||||  || ||||||||||||||||    
T  6012032 ccaagttaatagcataaaacggtagaatgcctacaaataat 6012072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 133 - 270
Target Start/End: Original strand, 8096286 - 8096432
Alignment:
Q  133 tttttataaaaacaaaatgatatttattcattcaaattgatagagcacat---------catcgttaaagatgtaaatggtgaatctgcgaacaaattca 223  Q
    ||||||||||||||||| |||||| |||||||||||| ||||||| ||||         ||||| |||| ||||||| ||||||| |||||||||| |||    
T  8096286 tttttataaaaacaaaacgatattcattcattcaaatcgatagagtacatagatacaaacatcgctaaaaatgtaaagggtgaatttgcgaacaaactca 8096385  T
Q  224 caacacataagttaataacataaaacaatacaatgcctacaaataat 270  Q
    || |||  ||||||||| |||||||    | ||||||||||||||||    
T  8096386 caccacccaagttaatagcataaaatggcaaaatgcctacaaataat 8096432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 183 - 270
Target Start/End: Original strand, 11976782 - 11976869
Alignment:
Q  183 catcgttaaagatgtaaatggtgaatctgcgaacaaattcacaacacataagttaataacataaaacaatacaatgcctacaaataat 270  Q
    ||||| |||| ||||||| | |||||||||||||||| ||||||||   ||||||||||||||||||   | ||||||||||||||||    
T  11976782 catcgctaaaaatgtaaaggatgaatctgcgaacaaactcacaacatccaagttaataacataaaacgggaaaatgcctacaaataat 11976869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 128 - 177
Target Start/End: Complemental strand, 4771162 - 4771113
Alignment:
Q  128 ttttatttttataaaaacaaaatgatatttattcattcaaattgatagag 177  Q
    |||| ||||||||||||||||| |||||| ||||||||||||||||||||    
T  4771162 ttttttttttataaaaacaaaacgatattcattcattcaaattgatagag 4771113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 125 - 270
Target Start/End: Complemental strand, 13007538 - 13007383
Alignment:
Q  125 tacttttatttttataaaaacaaaatgatatttattcattcaaattgatagagcacat----------catcgttaaagatgtaaatggtgaatctgcga 214  Q
    ||||||| |||| | |||||||||| |||||| |||||||||||||||||||| ||||          ||||| |||| | ||||| ||||||||||| |    
T  13007538 tactttttttttgacaaaaacaaaacgatattcattcattcaaattgatagagtacatcaaatacaaacatcgctaaaaacgtaaagggtgaatctgcaa 13007439  T
Q  215 acaaattcacaacacataagttaataacataaaacaatacaatgcctacaaataat 270  Q
    ||||| ||||| |||  ||||||||| |||| |||   | ||||||||||||||||    
T  13007438 acaaactcacagcacccaagttaatagcatacaacggcaaaatgcctacaaataat 13007383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 202 - 270
Target Start/End: Complemental strand, 14211449 - 14211381
Alignment:
Q  202 ggtgaatctgcgaacaaattcacaacacataagttaataacataaaacaatacaatgcctacaaataat 270  Q
    |||||||||||||||||| |||||||||  ||||||||| |||| ||||  | ||||||||||||||||    
T  14211449 ggtgaatctgcgaacaaactcacaacacccaagttaatagcatacaacagaaaaatgcctacaaataat 14211381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 183 - 270
Target Start/End: Complemental strand, 34945634 - 34945547
Alignment:
Q  183 catcgttaaagatgtaaatggtgaatctgcgaacaaattcacaacacataagttaataacataaaacaatacaatgcctacaaataat 270  Q
    ||||| |||| | ||||| |||||||||||||||||| |||||||||  ||||||||| |||| ||| | | |||||||| |||||||    
T  34945634 catcgctaaaaacgtaaagggtgaatctgcgaacaaactcacaacacccaagttaatagcatacaacgacaaaatgcctataaataat 34945547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 270
Target Start/End: Original strand, 2979154 - 2979240
Alignment:
Q  184 atcgttaaagatgtaaatggtgaatctgcgaacaaattcacaacacataagttaataacataaaacaatacaatgcctacaaataat 270  Q
    |||| |||| ||||| | |||||||||||||||||| ||||||||   ||||||||| |||| |||   ||||||||||||||||||    
T  2979154 atcgctaaaaatgtatagggtgaatctgcgaacaaactcacaacatccaagttaatagcatacaacggcacaatgcctacaaataat 2979240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 126 - 176
Target Start/End: Original strand, 8087993 - 8088043
Alignment:
Q  126 acttttatttttataaaaacaaaatgatatttattcattcaaattgataga 176  Q
    |||||| |||| | ||||||||||||||||| |||||||||||||||||||    
T  8087993 actttttttttgacaaaaacaaaatgatattcattcattcaaattgataga 8088043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 140 - 270
Target Start/End: Original strand, 9113519 - 9113659
Alignment:
Q  140 aaaaacaaaatgatatttattcattcaaattgatagagcacatca----------tcgttaaagatgtaaatggtgaatctgcgaacaaattcacaacac 229  Q
    |||||||||| |||||| |||||||||||| ||||||| ||||||          ||| |||| | ||||| |||||||||||||||||| ||| |||||    
T  9113519 aaaaacaaaacgatattcattcattcaaatcgatagagtacatcagatacaaacatcgctaaaaacgtaaagggtgaatctgcgaacaaactcagaacac 9113618  T
Q  230 ataagttaataacataaaacaatacaatgcctacaaataat 270  Q
      ||||||||| |||| |||   | ||||||||||||||||    
T  9113619 ccaagttaatagcatacaacggaaaaatgcctacaaataat 9113659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 128 - 185
Target Start/End: Original strand, 41418194 - 41418250
Alignment:
Q  128 ttttatttttataaaaacaaaatgatatttattcattcaaattgatagagcacatcat 185  Q
    |||| |||||| |||||||||| |||||| |||||||||||||||||||| |||||||    
T  41418194 ttttttttttacaaaaacaaaacgatatt-attcattcaaattgatagagtacatcat 41418250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 140 - 176
Target Start/End: Complemental strand, 13422226 - 13422190
Alignment:
Q  140 aaaaacaaaatgatatttattcattcaaattgataga 176  Q
    ||||||||||||||||| |||||||||||||||||||    
T  13422226 aaaaacaaaatgatattcattcattcaaattgataga 13422190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 263 - 302
Target Start/End: Complemental strand, 13422029 - 13421990
Alignment:
Q  263 caaataattgattgaatttgtaattgactgatgtccatct 302  Q
    ||||| ||||||||||||||||||||||||||||| ||||    
T  13422029 caaatcattgattgaatttgtaattgactgatgtcgatct 13421990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 128 - 183
Target Start/End: Complemental strand, 17218182 - 17218127
Alignment:
Q  128 ttttatttttataaaaacaaaatgatatttattcattcaaattgatagagcacatc 183  Q
    |||| |||||| |||||  |||||||||| |||||||||||||||||||| |||||    
T  17218182 ttttttttttaaaaaaaataaatgatattcattcattcaaattgatagagtacatc 17218127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 183 - 270
Target Start/End: Complemental strand, 38598038 - 38597951
Alignment:
Q  183 catcgttaaagatgtaaatggtgaatctgcgaacaaattcacaacacataagttaataacataaaacaatacaatgcctacaaataat 270  Q
    ||||| |||| | ||||| ||||||| |||||||||| |||||||||  ||||||||| |||| |||   | ||||||||||||||||    
T  38598038 catcgctaaaaacgtaaagggtgaatttgcgaacaaactcacaacacccaagttaatagcatacaacggcaaaatgcctacaaataat 38597951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 204 - 266
Target Start/End: Complemental strand, 16981523 - 16981461
Alignment:
Q  204 tgaatctgcgaacaaattcacaacacataagttaataacataaaacaatacaatgcctacaaa 266  Q
    |||||||||||||||| ||||||||   ||||||||| |||| ||| ||| ||||||||||||    
T  16981523 tgaatctgcgaacaaactcacaacatccaagttaatagcatataacgatataatgcctacaaa 16981461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 196 - 266
Target Start/End: Original strand, 27266699 - 27266769
Alignment:
Q  196 gtaaatggtgaatctgcgaacaaattcacaacacataagttaataacataaaacaatacaatgcctacaaa 266  Q
    ||||||| |||||||||||||||| ||||| ||   ||||||||| |||| ||||| | ||||||||||||    
T  27266699 gtaaatgatgaatctgcgaacaaactcacagcatccaagttaatagcatataacaacataatgcctacaaa 27266769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 270
Target Start/End: Complemental strand, 39567494 - 39567424
Alignment:
Q  200 atggtgaatctgcgaacaaattcacaacacataagttaataacataaaacaatacaatgcctacaaataat 270  Q
    ||||||||||| |||||||| |||||||||  ||| |||||||||| ||| | | |||| |||||||||||    
T  39567494 atggtgaatctacgaacaaactcacaacacccaaggtaataacatacaacgacaaaatgtctacaaataat 39567424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 169
Target Start/End: Complemental strand, 781702 - 781661
Alignment:
Q  128 ttttatttttataaaaacaaaatgatatttattcattcaaat 169  Q
    |||| |||||| ||||||||||||||||| ||||||||||||    
T  781702 ttttttttttacaaaaacaaaatgatattcattcattcaaat 781661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 228
Target Start/End: Complemental strand, 11875621 - 11875576
Alignment:
Q  183 catcgttaaagatgtaaatggtgaatctgcgaacaaattcacaaca 228  Q
    |||||||||| | ||||||| |||||||||||||||| ||||||||    
T  11875621 catcgttaaacacgtaaatgatgaatctgcgaacaaactcacaaca 11875576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 169
Target Start/End: Original strand, 19259577 - 19259618
Alignment:
Q  128 ttttatttttataaaaacaaaatgatatttattcattcaaat 169  Q
    |||| |||||| |||||||||||||||||||| |||||||||    
T  19259577 ttttttttttacaaaaacaaaatgatatttatccattcaaat 19259618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 270
Target Start/End: Original strand, 24229578 - 24229718
Alignment:
Q  140 aaaaacaaaatgatatttattcattcaaattgatagagcacat----------catcgttaaagatgtaaatggtgaatctgcgaacaaattcacaacac 229  Q
    |||||||||| |||||| |||||||||||| ||||||| ||||          ||||| |||| | |||||  ||||||||||||||||| ||||| |||    
T  24229578 aaaaacaaaacgatattcattcattcaaatcgatagagtacatcagatataaacatcgctaaaaacgtaaagagtgaatctgcgaacaaactcacagcac 24229677  T
Q  230 ataagttaataacataaaacaatacaatgcctacaaataat 270  Q
      ||||||||| |||| |||   | ||||||||||||||||    
T  24229678 ccaagttaatagcatacaacggcaaaatgcctacaaataat 24229718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 177
Target Start/End: Original strand, 27576150 - 27576199
Alignment:
Q  128 ttttatttttataaaaacaaaatgatatttattcattcaaattgatagag 177  Q
    ||||||||||| ||||||||||  ||||| |||||||||||| |||||||    
T  27576150 ttttatttttacaaaaacaaaacaatattcattcattcaaatcgatagag 27576199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 185
Target Start/End: Original strand, 35475103 - 35475160
Alignment:
Q  128 ttttatttttataaaaacaaaatgatatttattcattcaaattgatagagcacatcat 185  Q
    |||| |||| ||||||| ||||||||||| ||||||||||||||| |||  |||||||    
T  35475103 tttttttttaataaaaataaaatgatattcattcattcaaattgagagattacatcat 35475160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 147 - 183
Target Start/End: Complemental strand, 5378742 - 5378706
Alignment:
Q  147 aaatgatatttattcattcaaattgatagagcacatc 183  Q
    |||||||||| |||||||||||||||||||| |||||    
T  5378742 aaatgatattcattcattcaaattgatagagtacatc 5378706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 176
Target Start/End: Original strand, 8984783 - 8984819
Alignment:
Q  140 aaaaacaaaatgatatttattcattcaaattgataga 176  Q
    |||||||||| |||||| |||||||||||||||||||    
T  8984783 aaaaacaaaacgatattcattcattcaaattgataga 8984819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 184
Target Start/End: Original strand, 14082190 - 14082234
Alignment:
Q  140 aaaaacaaaatgatatttattcattcaaattgatagagcacatca 184  Q
    |||||||||| |||||  |||||||||||| ||||||||||||||    
T  14082190 aaaaacaaaacgatatccattcattcaaatcgatagagcacatca 14082234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 133 - 169
Target Start/End: Complemental strand, 35851098 - 35851062
Alignment:
Q  133 tttttataaaaacaaaatgatatttattcattcaaat 169  Q
    |||||| ||||||||||||||||| ||||||||||||    
T  35851098 tttttacaaaaacaaaatgatattcattcattcaaat 35851062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 147 - 183
Target Start/End: Complemental strand, 40775201 - 40775165
Alignment:
Q  147 aaatgatatttattcattcaaattgatagagcacatc 183  Q
    |||||||||| |||||||||||||||||||| |||||    
T  40775201 aaatgatattcattcattcaaattgatagagtacatc 40775165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 206 - 270
Target Start/End: Complemental strand, 41630720 - 41630656
Alignment:
Q  206 aatctgcgaacaaattcacaacacataagttaataacataaaacaatacaatgcctacaaataat 270  Q
    |||||| ||||||| ||||||||| |||||||||| |||| ||| | | |||| |||||||||||    
T  41630720 aatctgtgaacaaactcacaacacctaagttaatagcatacaacgacaaaatgtctacaaataat 41630656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 128 - 184
Target Start/End: Original strand, 42505055 - 42505110
Alignment:
Q  128 ttttatttttataaaaacaaaatgatatttattcattcaaattgatagagcacatca 184  Q
    ||||||||||| ||||| |||  |||||| |||||||||||||||||||| ||||||    
T  42505055 ttttatttttacaaaaataaac-gatattcattcattcaaattgatagagtacatca 42505110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 46; Significance: 3e-17; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 140 - 270
Target Start/End: Original strand, 48650528 - 48650668
Alignment:
Q  140 aaaaacaaaatgatatttattcattcaaattgatagagcacatca----------tcgttaaagatgtaaatggtgaatctgcgaacaaattcacaacac 229  Q
    ||||||||||||||||| |||||||||||| ||||||| ||||||          ||| |||| ||||||| |||||||||||||||||| |||||||||    
T  48650528 aaaaacaaaatgatattcattcattcaaatcgatagagtacatcagatacaaatatcgctaaaaatgtaaagggtgaatctgcgaacaaactcacaacac 48650627  T
Q  230 ataagttaataacataaaacaatacaatgcctacaaataat 270  Q
      ||||||||| |||| |||   | ||||||||||||||||    
T  48650628 ccaagttaatagcatacaacggcaaaatgcctacaaataat 48650668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 196 - 270
Target Start/End: Complemental strand, 33580108 - 33580034
Alignment:
Q  196 gtaaatggtgaatctgcgaacaaattcacaacacataagttaataacataaaacaatacaatgcctacaaataat 270  Q
    ||||| |||||||||||||||||| |||||||||  ||||||||| ||||||||   | ||||||||||||||||    
T  33580108 gtaaagggtgaatctgcgaacaaaatcacaacacccaagttaatagcataaaacggcaaaatgcctacaaataat 33580034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 196 - 270
Target Start/End: Original strand, 47041908 - 47041982
Alignment:
Q  196 gtaaatggtgaatctgcgaacaaattcacaacacataagttaataacataaaacaatacaatgcctacaaataat 270  Q
    ||||| |||||||||||||||||| ||| | ||| |||||||||| |||||||| ||| || |||||||||||||    
T  47041908 gtaaaaggtgaatctgcgaacaaactcatatcacctaagttaatagcataaaacgataaaacgcctacaaataat 47041982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 140 - 184
Target Start/End: Original strand, 20464759 - 20464803
Alignment:
Q  140 aaaaacaaaatgatatttattcattcaaattgatagagcacatca 184  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||    
T  20464759 aaaaacaaaatgatattcattcattcaaattgatagagtacatca 20464803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 194 - 270
Target Start/End: Complemental strand, 42460979 - 42460903
Alignment:
Q  194 atgtaaatggtgaatctgcgaacaaattcacaacacataagttaataacataaaacaatacaatgcctacaaataat 270  Q
    ||||||| |||||||||||||||||| |||||  ||  ||||||||| |||| ||||| | ||||||||||||||||    
T  42460979 atgtaaagggtgaatctgcgaacaaactcacagtacccaagttaatagcatacaacaacaaaatgcctacaaataat 42460903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 140 - 270
Target Start/End: Original strand, 628718 - 628857
Alignment:
Q  140 aaaaacaaaatgatatttattcattcaaattgatagagcacatc---------atcgttaaagatgtaaatggtgaatctgcgaacaaattcacaacaca 230  Q
    ||||||||||||||||| |||||||||||||||||||  |||||         |||| |||| | ||||| | |||||||||||||||| |||||||||     
T  628718 aaaaacaaaatgatattcattcattcaaattgatagaatacatcaaaatcaagatcgctaaaaacgtaaaggatgaatctgcgaacaaactcacaacacc 628817  T
Q  231 taagttaataacataaaacaatacaatgcctacaaataat 270  Q
     |||||||||  ||| |||   | ||||||||||||||||    
T  628818 caagttaatagaatacaacggcaaaatgcctacaaataat 628857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 133 - 184
Target Start/End: Original strand, 46304308 - 46304359
Alignment:
Q  133 tttttataaaaacaaaatgatatttattcattcaaattgatagagcacatca 184  Q
    |||||| |||||||||| |||||| |||||||||||||||||||| ||||||    
T  46304308 tttttacaaaaacaaaacgatattcattcattcaaattgatagagtacatca 46304359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 183 - 245
Target Start/End: Original strand, 7448761 - 7448823
Alignment:
Q  183 catcgttaaagatgtaaatggtgaatctgcgaacaaattcacaacacataagttaataacata 245  Q
    ||||| |||| | |||||||||||||||||||||||| ||||| ||| |||||||||| ||||    
T  7448761 catcgataaaaacgtaaatggtgaatctgcgaacaaactcacatcacctaagttaatagcata 7448823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 183 - 245
Target Start/End: Original strand, 7456903 - 7456965
Alignment:
Q  183 catcgttaaagatgtaaatggtgaatctgcgaacaaattcacaacacataagttaataacata 245  Q
    ||||| |||| | |||||||||||||||||||||||| ||||| ||| |||||||||| ||||    
T  7456903 catcgataaaaacgtaaatggtgaatctgcgaacaaactcacatcacctaagttaatagcata 7456965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 200 - 270
Target Start/End: Original strand, 51303507 - 51303577
Alignment:
Q  200 atggtgaatctgcgaacaaattcacaacacataagttaataacataaaacaatacaatgcctacaaataat 270  Q
    |||||||||||||||||||| |||||||||  ||||||||| |||| |||   | ||||||||||||||||    
T  51303507 atggtgaatctgcgaacaaactcacaacacccaagttaatagcatacaacggcaaaatgcctacaaataat 51303577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 140 - 270
Target Start/End: Original strand, 21533603 - 21533743
Alignment:
Q  140 aaaaacaaaatgatatttattcattcaaattgatagagcacat----------catcgttaaagatgtaaatggtgaatctgcgaacaaattcacaacac 229  Q
    ||||||||||||||||| |||||||||||| ||||||| ||||          ||||| |||| | ||||| ||| |||||||||||||| ||||| |||    
T  21533603 aaaaacaaaatgatattcattcattcaaatcgatagagtacatcagatacaaacatcgctaaaaacgtaaaaggtaaatctgcgaacaaactcacagcac 21533702  T
Q  230 ataagttaataacataaaacaatacaatgcctacaaataat 270  Q
      ||||||||| |||| |||   | ||||||||||||||||    
T  21533703 ccaagttaatagcatacaacggcaaaatgcctacaaataat 21533743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 133 - 182
Target Start/End: Original strand, 23799735 - 23799784
Alignment:
Q  133 tttttataaaaacaaaatgatatttattcattcaaattgatagagcacat 182  Q
    |||||| |||||||||| |||||| |||||||||||||||||||| ||||    
T  23799735 tttttacaaaaacaaaacgatattcattcattcaaattgatagagtacat 23799784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 128 - 270
Target Start/End: Original strand, 45568227 - 45568379
Alignment:
Q  128 ttttatttttataaaaacaaaatgatatttattcattcaaattgatagagcacat----------catcgttaaagatgtaaatggtgaatctgcgaaca 217  Q
    |||| ||||| ||||||||||| |||||| |||||||||||| ||||||| ||||          ||||| |||| | ||||| |||||||||||||| |    
T  45568227 ttttttttttgtaaaaacaaaacgatattcattcattcaaatcgatagagtacatcagatacaaacatcgctaaaaacgtaaagggtgaatctgcgaata 45568326  T
Q  218 aattcacaacacataagttaataacataaaacaatacaatgcctacaaataat 270  Q
    || ||||| |||  ||||||||| |||| |||   | ||||||||||||||||    
T  45568327 aactcacatcacccaagttaatagcatacaacggcaaaatgcctacaaataat 45568379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 140 - 270
Target Start/End: Original strand, 52922911 - 52923051
Alignment:
Q  140 aaaaacaaaatgatatttattcattcaaattgatagagcacatca----------tcgttaaagatgtaaatggtgaatctgcgaacaaattcacaacac 229  Q
    |||||||||| |||||| |||||||||||| ||||||| ||||||          ||| |||| | ||||| |||||||||||||||||| ||||| ||     
T  52922911 aaaaacaaaacgatattcattcattcaaatcgatagagtacatcaaatacaaacatcgctaaaaacgtaaagggtgaatctgcgaacaaactcacagcag 52923010  T
Q  230 ataagttaataacataaaacaatacaatgcctacaaataat 270  Q
      ||||||||| |||| |||  || ||||||||||||||||    
T  52923011 ccaagttaatagcatacaacggtaaaatgcctacaaataat 52923051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 140 - 176
Target Start/End: Original strand, 3085085 - 3085121
Alignment:
Q  140 aaaaacaaaatgatatttattcattcaaattgataga 176  Q
    ||||||||||||||||| |||||||||||||||||||    
T  3085085 aaaaacaaaatgatattcattcattcaaattgataga 3085121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 128 - 184
Target Start/End: Complemental strand, 37041074 - 37041018
Alignment:
Q  128 ttttatttttataaaaacaaaatgatatttattcattcaaattgatagagcacatca 184  Q
    |||| |||| |||||||||||| |||||| ||||||||| |||||||||| ||||||    
T  37041074 tttttttttaataaaaacaaaacgatattcattcattcagattgatagagtacatca 37041018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 133 - 176
Target Start/End: Complemental strand, 16235737 - 16235695
Alignment:
Q  133 tttttataaaaacaaaatgatatttattcattcaaattgataga 176  Q
    |||||| ||||||||| |||||||||||||||||||||||||||    
T  16235737 tttttacaaaaacaaa-tgatatttattcattcaaattgataga 16235695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 183 - 270
Target Start/End: Complemental strand, 21431854 - 21431767
Alignment:
Q  183 catcgttaaagatgtaaatggtgaatctgcgaacaaattcacaacacataagttaataacataaaacaatacaatgcctacaaataat 270  Q
    ||||| |||| | |||||||||||||||||||||||  ||||| |||  ||||||||| |||| |||   | ||||||||||||||||    
T  21431854 catcgctaaaaacgtaaatggtgaatctgcgaacaatctcacagcacccaagttaatatcatacaacggcaaaatgcctacaaataat 21431767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 128 - 266
Target Start/End: Complemental strand, 35175709 - 35175562
Alignment:
Q  128 ttttatttttataaaaacaaaatgatatttattcattcaaattgatagagcacat---------catcgttaaagatgtaaatggtgaatctgcgaacaa 218  Q
    |||| |||||| ||||| |||| |||||| |||||||||||||||||||  ||||         ||||| |||| | ||||| | |||||||||||||||    
T  35175709 ttttttttttacaaaaataaaacgatattcattcattcaaattgatagaatacatcataatcaacatcgctaaaaacgtaaaagatgaatctgcgaacaa 35175610  T
Q  219 attcacaacacataagttaataacataaaacaatacaatgcctacaaa 266  Q
    | |||||||||  ||||||||| |||| ||  | | ||||||||||||    
T  35175609 actcacaacactcaagttaatagcatacaatgacaaaatgcctacaaa 35175562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 203 - 270
Target Start/End: Complemental strand, 40487546 - 40487479
Alignment:
Q  203 gtgaatctgcgaacaaattcacaacacataagttaataacataaaacaatacaatgcctacaaataat 270  Q
    |||||| |||||||||| |||||||||  |||||||||||||| |||   | ||||||||||||||||    
T  40487546 gtgaatttgcgaacaaactcacaacacccaagttaataacatataacggcaaaatgcctacaaataat 40487479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 135 - 185
Target Start/End: Original strand, 24396288 - 24396338
Alignment:
Q  135 tttataaaaacaaaatgatatttattcattcaaattgatagagcacatcat 185  Q
    |||| |||||||||| |||||| ||| |||||||||||||||| |||||||    
T  24396288 tttacaaaaacaaaacgatattcattaattcaaattgatagagtacatcat 24396338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 147 - 177
Target Start/End: Complemental strand, 28876913 - 28876883
Alignment:
Q  147 aaatgatatttattcattcaaattgatagag 177  Q
    |||||||||||||||||||||||||||||||    
T  28876913 aaatgatatttattcattcaaattgatagag 28876883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 270
Target Start/End: Complemental strand, 38142765 - 38142679
Alignment:
Q  184 atcgttaaagatgtaaatggtgaatctgcgaacaaattcacaacacataagttaataacataaaacaatacaatgcctacaaataat 270  Q
    |||| |||| ||||||| ||||||| ||| |||||| ||||| ||   |||||||||  ||| ||||||| ||||||||||||||||    
T  38142765 atcgctaaaaatgtaaagggtgaatatgcaaacaaactcacagcattcaagttaatagtatacaacaataaaatgcctacaaataat 38142679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 204 - 270
Target Start/End: Original strand, 38859980 - 38860046
Alignment:
Q  204 tgaatctgcgaacaaattcacaacacataagttaataacataaaacaatacaatgcctacaaataat 270  Q
    |||||||||||||||| |||||||||  ||||||||| |||| |||   | ||||||||||||||||    
T  38859980 tgaatctgcgaacaaactcacaacacccaagttaatagcatacaacggcaaaatgcctacaaataat 38860046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 130 - 176
Target Start/End: Complemental strand, 41818530 - 41818484
Alignment:
Q  130 ttatttttataaaaacaaaatgatatttattcattcaaattgataga 176  Q
    ||||||||| |||| ||||| |||||| |||||||||||||||||||    
T  41818530 ttatttttacaaaagcaaaacgatattcattcattcaaattgataga 41818484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 128 - 174
Target Start/End: Original strand, 50194118 - 50194164
Alignment:
Q  128 ttttatttttataaaaacaaaatgatatttattcattcaaattgata 174  Q
    |||| |||||| |||| |||||||||||| |||||||||||||||||    
T  50194118 ttttttttttacaaaagcaaaatgatattcattcattcaaattgata 50194164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 127 - 169
Target Start/End: Original strand, 50611182 - 50611224
Alignment:
Q  127 cttttatttttataaaaacaaaatgatatttattcattcaaat 169  Q
    ||||| |||||| ||||||||||||||||| ||||||||||||    
T  50611182 cttttttttttacaaaaacaaaatgatattcattcattcaaat 50611224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 169
Target Start/End: Complemental strand, 32607778 - 32607737
Alignment:
Q  128 ttttatttttataaaaacaaaatgatatttattcattcaaat 169  Q
    |||| |||||| ||||||||||||||||| ||||||||||||    
T  32607778 ttttttttttacaaaaacaaaatgatattcattcattcaaat 32607737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 177
Target Start/End: Complemental strand, 40487631 - 40487582
Alignment:
Q  128 ttttatttttataaaaacaaaatgatatttattcattcaaattgatagag 177  Q
    |||| |||||| |||||||||| |||||| |||||||||||| |||||||    
T  40487631 ttttttttttacaaaaacaaaacgatattcattcattcaaatcgatagag 40487582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 177
Target Start/End: Original strand, 42455603 - 42455651
Alignment:
Q  128 ttttatttttataaaaacaaaatgatatttattcattcaaattgatagag 177  Q
    |||| |||||| ||||| |||||||||||| |||||||||||||||||||    
T  42455603 ttttttttttacaaaaataaaatgatattt-ttcattcaaattgatagag 42455651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 169
Target Start/End: Original strand, 44907164 - 44907205
Alignment:
Q  128 ttttatttttataaaaacaaaatgatatttattcattcaaat 169  Q
    |||| |||||| ||||||||||||||||| ||||||||||||    
T  44907164 ttttttttttacaaaaacaaaatgatattcattcattcaaat 44907205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 245
Target Start/End: Original strand, 46304380 - 46304429
Alignment:
Q  196 gtaaatggtgaatctgcgaacaaattcacaacacataagttaataacata 245  Q
    ||||| |||||||||||||||||| |||||||||  ||||||||| ||||    
T  46304380 gtaaagggtgaatctgcgaacaaactcacaacactcaagttaatagcata 46304429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 169
Target Start/End: Original strand, 51202041 - 51202070
Alignment:
Q  140 aaaaacaaaatgatatttattcattcaaat 169  Q
    ||||||||||||||||||||||||||||||    
T  51202041 aaaaacaaaatgatatttattcattcaaat 51202070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 229
Target Start/End: Complemental strand, 51487310 - 51487277
Alignment:
Q  196 gtaaatggtgaatctgcgaacaaattcacaacac 229  Q
    ||||| ||||||||||||||||||||||||||||    
T  51487310 gtaaagggtgaatctgcgaacaaattcacaacac 51487277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 183 - 271
Target Start/End: Original strand, 6954543 - 6954631
Alignment:
Q  183 catcgttaaagatgtaaatggtgaatctgcgaacaaattcacaacacataagttaataacataaaacaatacaatgcctacaaataatt 271  Q
    ||||| |||| | ||||| ||||||||||| |||||| ||||| |||  ||||||||| |||| |||   | |||||||||||||||||    
T  6954543 catcgctaaaaacgtaaagggtgaatctgcaaacaaactcacagcacccaagttaatagcatacaacggcaaaatgcctacaaataatt 6954631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 270
Target Start/End: Complemental strand, 8914934 - 8914866
Alignment:
Q  202 ggtgaatctgcgaacaaattcacaacacataagttaataacataaaacaatacaatgcctacaaataat 270  Q
    |||||||||||||||||| ||||| |||  ||||||||| |||| |||   | ||||||||||||||||    
T  8914934 ggtgaatctgcgaacaaactcacatcactcaagttaatagcatacaacggcaaaatgcctacaaataat 8914866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 128 - 184
Target Start/End: Complemental strand, 9998773 - 9998717
Alignment:
Q  128 ttttatttttataaaaacaaaatgatatttattcattcaaattgatagagcacatca 184  Q
    |||| |||||| ||||| |||| |||||| |||||||||||| ||||||| ||||||    
T  9998773 ttttttttttacaaaaataaaacgatattcattcattcaaatcgatagagtacatca 9998717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 172
Target Start/End: Complemental strand, 17238102 - 17238070
Alignment:
Q  140 aaaaacaaaatgatatttattcattcaaattga 172  Q
    ||||||||||||||||| |||||||||||||||    
T  17238102 aaaaacaaaatgatattcattcattcaaattga 17238070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 270
Target Start/End: Original strand, 21289680 - 21289748
Alignment:
Q  202 ggtgaatctgcgaacaaattcacaacacataagttaataacataaaacaatacaatgcctacaaataat 270  Q
    |||||||||||||||||| ||||| |||  ||||||||| |||| |||   | ||||||||||||||||    
T  21289680 ggtgaatctgcgaacaaactcacagcacccaagttaatagcatacaacggcaaaatgcctacaaataat 21289748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 183
Target Start/End: Complemental strand, 21803967 - 21803935
Alignment:
Q  151 gatatttattcattcaaattgatagagcacatc 183  Q
    ||||||||||||||||||||||||||| |||||    
T  21803967 gatatttattcattcaaattgatagagtacatc 21803935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 147 - 183
Target Start/End: Complemental strand, 27831538 - 27831502
Alignment:
Q  147 aaatgatatttattcattcaaattgatagagcacatc 183  Q
    |||||||||||||||||| |||||||||||| |||||    
T  27831538 aaatgatatttattcatttaaattgatagagtacatc 27831502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 133 - 169
Target Start/End: Complemental strand, 29503765 - 29503729
Alignment:
Q  133 tttttataaaaacaaaatgatatttattcattcaaat 169  Q
    |||||| ||||||||||||||||| ||||||||||||    
T  29503765 tttttacaaaaacaaaatgatattcattcattcaaat 29503729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 147 - 183
Target Start/End: Complemental strand, 33076725 - 33076689
Alignment:
Q  147 aaatgatatttattcattcaaattgatagagcacatc 183  Q
    |||||||||| |||||||||||||||||||| |||||    
T  33076725 aaatgatattcattcattcaaattgatagagtacatc 33076689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 147 - 183
Target Start/End: Original strand, 36623931 - 36623967
Alignment:
Q  147 aaatgatatttattcattcaaattgatagagcacatc 183  Q
    |||||||||| |||||||||||||||||||| |||||    
T  36623931 aaatgatattcattcattcaaattgatagagtacatc 36623967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 176
Target Start/End: Complemental strand, 38546093 - 38546057
Alignment:
Q  140 aaaaacaaaatgatatttattcattcaaattgataga 176  Q
    |||||||||| ||||||||||||||||||| ||||||    
T  38546093 aaaaacaaaacgatatttattcattcaaatcgataga 38546057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 184
Target Start/End: Complemental strand, 43017182 - 43017138
Alignment:
Q  140 aaaaacaaaatgatatttattcattcaaattgatagagcacatca 184  Q
    |||||||||| |||||| |||||||||||| ||||||| ||||||    
T  43017182 aaaaacaaaacgatattcattcattcaaatcgatagagtacatca 43017138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 183
Target Start/End: Complemental strand, 46926840 - 46926808
Alignment:
Q  151 gatatttattcattcaaattgatagagcacatc 183  Q
    ||||||||||||||||||||||||||| |||||    
T  46926840 gatatttattcattcaaattgatagagtacatc 46926808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 176
Target Start/End: Original strand, 47041842 - 47041878
Alignment:
Q  140 aaaaacaaaatgatatttattcattcaaattgataga 176  Q
    ||||||||||||||||| |||||||||||| ||||||    
T  47041842 aaaaacaaaatgatattcattcattcaaatagataga 47041878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 214 - 270
Target Start/End: Original strand, 52115899 - 52115955
Alignment:
Q  214 aacaaattcacaacacataagttaataacataaaacaatacaatgcctacaaataat 270  Q
    |||||| |||||||||  |||||||||||||| ||||| | |||| |||||||||||    
T  52115899 aacaaactcacaacacccaagttaataacatataacaacaaaatgactacaaataat 52115955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 46; Significance: 3e-17; HSPs: 61)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 140 - 270
Target Start/End: Original strand, 29173512 - 29173652
Alignment:
Q  140 aaaaacaaaatgatatttattcattcaaattgatagagcacatca----------tcgttaaagatgtaaatggtgaatctgcgaacaaattcacaacac 229  Q
    |||||||||||||||||||||||||||||||||| ||  ||||||          ||| |||| | ||||| | |||||||||||||||| |||||||||    
T  29173512 aaaaacaaaatgatatttattcattcaaattgattgattacatcagatacaaacatcgctaaaaacgtaaaggatgaatctgcgaacaaactcacaacac 29173611  T
Q  230 ataagttaataacataaaacaatacaatgcctacaaataat 270  Q
      |||||||||||||| ||||| | ||||| ||||||||||    
T  29173612 caaagttaataacatacaacaacaaaatgcatacaaataat 29173652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 128 - 270
Target Start/End: Original strand, 25508851 - 25509003
Alignment:
Q  128 ttttatttttataaaaacaaaatgatatttattcattcaaattgatagagcacatcat----------cgttaaagatgtaaatggtgaatctgcgaaca 217  Q
    |||| |||||| |||||||||| ||||||||||||||||||||||||||| |||||||          || |||| |  |||| | ||||||||||||||    
T  25508851 ttttctttttacaaaaacaaaacgatatttattcattcaaattgatagagtacatcatatacaaacatcggtaaaaacataaacgatgaatctgcgaaca 25508950  T
Q  218 aattcacaacacataagttaataacataaaacaatacaatgcctacaaataat 270  Q
    || ||||| |||  |||||||||||||| |||   | ||||||||||||||||    
T  25508951 aactcacatcacccaagttaataacatacaacggcaaaatgcctacaaataat 25509003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 128 - 176
Target Start/End: Complemental strand, 14416483 - 14416435
Alignment:
Q  128 ttttatttttataaaaacaaaatgatatttattcattcaaattgataga 176  Q
    |||| |||||| |||||||||||||||||||||||||||||||||||||    
T  14416483 ttttttttttacaaaaacaaaatgatatttattcattcaaattgataga 14416435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 140 - 270
Target Start/End: Complemental strand, 4100635 - 4100501
Alignment:
Q  140 aaaaacaaaatgatatttattcattcaaattgatagagcacat-----catcgttaaagatgtaaatggtgaatctgcgaacaaattcacaacacataag 234  Q
    |||||||||| |||||| |||||||||||| ||||||  ||||     ||||| |||| | ||||| |||||||||||||||||| |||||||||  |||    
T  4100635 aaaaacaaaacgatattcattcattcaaatcgatagattacatacaaacatcgctaaaaacgtaaagggtgaatctgcgaacaaactcacaacac-caag 4100537  T
Q  235 ttaataacataaaacaatacaatgcctacaaataat 270  Q
    |||||| |||| |||   | ||||||||||||||||    
T  4100536 ttaatatcatacaacggcaaaatgcctacaaataat 4100501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 184 - 270
Target Start/End: Original strand, 4041443 - 4041529
Alignment:
Q  184 atcgttaaagatgtaaatggtgaatctgcgaacaaattcacaacacataagttaataacataaaacaatacaatgcctacaaataat 270  Q
    ||||||||| | ||||| |||||||||||||||||| ||||||||| |||||||||| |||  ||||  | |||| |||||||||||    
T  4041443 atcgttaaaaacgtaaagggtgaatctgcgaacaaactcacaacacctaagttaatagcatgcaacagcaaaatggctacaaataat 4041529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 196 - 270
Target Start/End: Original strand, 12554042 - 12554116
Alignment:
Q  196 gtaaatggtgaatctgcgaacaaattcacaacacataagttaataacataaaacaatacaatgcctacaaataat 270  Q
    ||||| |||||||||||||||||| |||||||||  ||||||||| |||| ||| | | ||||||||||||||||    
T  12554042 gtaaagggtgaatctgcgaacaaactcacaacacccaagttaatatcatacaacgacaaaatgcctacaaataat 12554116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 204 - 270
Target Start/End: Complemental strand, 14955760 - 14955694
Alignment:
Q  204 tgaatctgcgaacaaattcacaacacataagttaataacataaaacaatacaatgcctacaaataat 270  Q
    |||||||||||||||| ||||||||| ||||||||||||||| ||  ||| |||| |||||||||||    
T  14955760 tgaatctgcgaacaaactcacaacacctaagttaataacatacaatgataaaatgtctacaaataat 14955694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 196 - 270
Target Start/End: Complemental strand, 18763707 - 18763633
Alignment:
Q  196 gtaaatggtgaatctgcgaacaaattcacaacacataagttaataacataaaacaatacaatgcctacaaataat 270  Q
    ||||| |||||||||||||||||| |||||||||  ||||||||| ||||||||   | ||||||||||||||||    
T  18763707 gtaaagggtgaatctgcgaacaaactcacaacacccaagttaatagcataaaacggcaaaatgcctacaaataat 18763633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 135 - 185
Target Start/End: Original strand, 30923247 - 30923297
Alignment:
Q  135 tttataaaaacaaaatgatatttattcattcaaattgatagagcacatcat 185  Q
    |||| ||||||||||||||||| |||||||||||||||||||| |||||||    
T  30923247 tttacaaaaacaaaatgatattcattcattcaaattgatagagtacatcat 30923297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 140 - 270
Target Start/End: Complemental strand, 1415862 - 1415722
Alignment:
Q  140 aaaaacaaaatgatatttattcattcaaattgatagagcacatca----------tcgttaaagatgtaaatggtgaatctgcgaacaaattcacaacac 229  Q
    ||||||||||||||||| |||||||||||| ||||||  ||||||          ||| |||| | || || |||||||||||||||||| |||||||||    
T  1415862 aaaaacaaaatgatattcattcattcaaatcgatagattacatcagatacaaacatcgctaaaaacgttaaaggtgaatctgcgaacaaactcacaacac 1415763  T
Q  230 ataagttaataacataaaacaatacaatgcctacaaataat 270  Q
      ||||||||| ||| ||||  || ||||||||||||||||    
T  1415762 ccaagttaatagcattaaacggtaaaatgcctacaaataat 1415722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 187 - 268
Target Start/End: Original strand, 19028766 - 19028847
Alignment:
Q  187 gttaaagatgtaaatggtgaatctgcgaacaaattcacaacacataagttaataacataaaacaatacaatgcctacaaata 268  Q
    |||||| ||||||| ||||||| |||||||||  |||||||||  ||||||||| |||||||| | | ||||||||||||||    
T  19028766 gttaaaaatgtaaaaggtgaatttgcgaacaatctcacaacactcaagttaatagcataaaacgaaaaaatgcctacaaata 19028847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 202 - 270
Target Start/End: Original strand, 10237083 - 10237151
Alignment:
Q  202 ggtgaatctgcgaacaaattcacaacacataagttaataacataaaacaatacaatgcctacaaataat 270  Q
    |||||||||||||||||| |||||||||  ||||||||| |||| ||| | | ||||||||||||||||    
T  10237083 ggtgaatctgcgaacaaactcacaacacccaagttaatagcatacaacgacaaaatgcctacaaataat 10237151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 140 - 266
Target Start/End: Complemental strand, 4228427 - 4228294
Alignment:
Q  140 aaaaacaaaatgatatttattcattcaaattgatagagcacatcat-------cgttaaagatgtaaatggtgaatctgcgaacaaattcacaacacata 232  Q
    ||||||||||||||||| |||||||||||| || |||  |||||||       || |||| ||||||| | |||||||||||||||| ||||||||   |    
T  4228427 aaaaacaaaatgatattcattcattcaaatcgagagattacatcattcaacaccgctaaaaatgtaaaggatgaatctgcgaacaaactcacaacatcca 4228328  T
Q  233 agttaataacataaaacaatacaatgcctacaaa 266  Q
    |||||||| |||| ||| | | ||||||||||||    
T  4228327 agttaatagcatataacgacataatgcctacaaa 4228294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 203 - 270
Target Start/End: Original strand, 18107618 - 18107685
Alignment:
Q  203 gtgaatctgcgaacaaattcacaacacataagttaataacataaaacaatacaatgcctacaaataat 270  Q
    |||||| |||||||||| |||||||||  |||||||||| ||||||| | | ||||||||||||||||    
T  18107618 gtgaatatgcgaacaaactcacaacacgcaagttaataatataaaacgacaaaatgcctacaaataat 18107685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 133 - 239
Target Start/End: Complemental strand, 28037396 - 28037283
Alignment:
Q  133 tttttataaaaacaaaatgatatttattcattcaaattgatagagcacat-------catcgttaaagatgtaaatggtgaatctgcgaacaaattcaca 225  Q
    |||||||||||| ||||||||||| ||||||||| || |||| || ||||       |||||||||| ||||||||| ||||| |||||||||| |||||    
T  28037396 tttttataaaaataaaatgatattcattcattcagatcgatatagtacatcatttaacatcgttaaaaatgtaaatgatgaatttgcgaacaaactcaca 28037297  T
Q  226 acacataagttaat 239  Q
    | | | ||||||||    
T  28037296 atatacaagttaat 28037283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 183 - 270
Target Start/End: Original strand, 28533802 - 28533889
Alignment:
Q  183 catcgttaaagatgtaaatggtgaatctgcgaacaaattcacaacacataagttaataacataaaacaatacaatgcctacaaataat 270  Q
    |||||||||| | ||||| |||| ||||||||||||| |||||||||  ||||||||| |||| ||| | | ||| ||||||||||||    
T  28533802 catcgttaaaaacgtaaaaggtggatctgcgaacaaactcacaacactcaagttaatagcatacaacgacaaaatacctacaaataat 28533889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 183 - 270
Target Start/End: Original strand, 29279418 - 29279505
Alignment:
Q  183 catcgttaaagatgtaaatggtgaatctgcgaacaaattcacaacacataagttaataacataaaacaatacaatgcctacaaataat 270  Q
    ||||| |||| | ||||||||||||| |||||||||| |||||||||   |||||||| ||||||||   | ||||||||||||||||    
T  29279418 catcgctaaaaacgtaaatggtgaatatgcgaacaaactcacaacaccatagttaatagcataaaacggcaaaatgcctacaaataat 29279505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 196 - 270
Target Start/End: Complemental strand, 7646717 - 7646643
Alignment:
Q  196 gtaaatggtgaatctgcgaacaaattcacaacacataagttaataacataaaacaatacaatgcctacaaataat 270  Q
    ||||| |||||||||||||||||| |||||||||  ||||||||| |||| |||   | ||||||||||||||||    
T  7646717 gtaaaaggtgaatctgcgaacaaactcacaacacccaagttaatagcatacaacggcaaaatgcctacaaataat 7646643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 204 - 270
Target Start/End: Complemental strand, 37994515 - 37994449
Alignment:
Q  204 tgaatctgcgaacaaattcacaacacataagttaataacataaaacaatacaatgcctacaaataat 270  Q
    |||||||||||||||| |||||||||  ||||||||| |||| ||||  | ||||||||||||||||    
T  37994515 tgaatctgcgaacaaactcacaacacccaagttaatagcatataacagcaaaatgcctacaaataat 37994449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 128 - 266
Target Start/End: Complemental strand, 24461756 - 24461612
Alignment:
Q  128 ttttatttttataaaaacaaaatgatatttattcattcaaattgatagagcacat------catcgttaaagatgtaaatggtgaatctgcgaacaaatt 221  Q
    |||| |||||| ||||| |||| |||||| |||||||||||||||||||  ||||      ||||| |||| | ||||| | |||| ||||||||||| |    
T  24461756 ttttttttttacaaaaataaaacgatattcattcattcaaattgatagaatacataatcaacatcgctaaaaacgtaaaggatgaacctgcgaacaaact 24461657  T
Q  222 cacaacacataagttaataacataaaacaatacaatgcctacaaa 266  Q
    ||||||||  ||||||||| |||| ||| | | ||| ||||||||    
T  24461656 cacaacaccaaagttaatagcatataacgacaaaatacctacaaa 24461612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 123 - 184
Target Start/End: Original strand, 36175290 - 36175351
Alignment:
Q  123 tatacttttatttttataaaaacaaaatgatatttattcattcaaattgatagagcacatca 184  Q
    |||| |||| |||||| ||||| ||||||||||| ||||||||||||||| |||| ||||||    
T  36175290 tatatttttttttttacaaaaataaaatgatattcattcattcaaattgacagagaacatca 36175351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 128 - 270
Target Start/End: Complemental strand, 38445483 - 38445331
Alignment:
Q  128 ttttatttttataaaaacaaaatgatatttattcattcaaattgatagagcacat----------catcgttaaagatgtaaatggtgaatctgcgaaca 217  Q
    |||| |||||| |||||||||| |||||| |||||||||||| ||||||| ||||          ||| |||||| | ||||| | ||||||||||||||    
T  38445483 ttttttttttacaaaaacaaaacgatattcattcattcaaatcgatagagtacatcagatacaaacattgttaaaaacgtaaaggatgaatctgcgaaca 38445384  T
Q  218 aattcacaacacataagttaataacataaaacaatacaatgcctacaaataat 270  Q
    || ||||| |||  |||||||||||||| ||    | ||||||||||||||||    
T  38445383 aactcacagcaccaaagttaataacatacaatggcaaaatgcctacaaataat 38445331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 133 - 174
Target Start/End: Original strand, 39284334 - 39284375
Alignment:
Q  133 tttttataaaaacaaaatgatatttattcattcaaattgata 174  Q
    |||| |||||||||||||| ||||||||||||||||||||||    
T  39284334 ttttgataaaaacaaaatggtatttattcattcaaattgata 39284375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 270
Target Start/End: Complemental strand, 1421909 - 1421841
Alignment:
Q  202 ggtgaatctgcgaacaaattcacaacacataagttaataacataaaacaatacaatgcctacaaataat 270  Q
    ||||||||||| |||||| |||||||||  ||||||||| |||| ||| | | ||||||||||||||||    
T  1421909 ggtgaatctgcaaacaaactcacaacacccaagttaatagcatacaacgacaaaatgcctacaaataat 1421841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 128 - 184
Target Start/End: Original strand, 4903928 - 4903984
Alignment:
Q  128 ttttatttttataaaaacaaaatgatatttattcattcaaattgatagagcacatca 184  Q
    |||| |||||| |||||||||| |||||| ||||||| |||||||||||| ||||||    
T  4903928 ttttttttttacaaaaacaaaacgatattcattcatttaaattgatagagtacatca 4903984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 140 - 176
Target Start/End: Original strand, 32448412 - 32448448
Alignment:
Q  140 aaaaacaaaatgatatttattcattcaaattgataga 176  Q
    ||||||||||||||||| |||||||||||||||||||    
T  32448412 aaaaacaaaatgatattcattcattcaaattgataga 32448448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 140 - 184
Target Start/End: Original strand, 37876401 - 37876445
Alignment:
Q  140 aaaaacaaaatgatatttattcattcaaattgatagagcacatca 184  Q
    |||||||||| |||||| |||||||||||||||||||| ||||||    
T  37876401 aaaaacaaaacgatattcattcattcaaattgatagagtacatca 37876445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 245
Target Start/End: Original strand, 41712622 - 41712678
Alignment:
Q  189 taaagatgtaaatggtgaatctgcgaacaaattcacaacacataagttaataacata 245  Q
    |||| ||||||||| | |||||||||||||| |||||| | ||||||||||||||||    
T  41712622 taaaaatgtaaatgataaatctgcgaacaaactcacaatatataagttaataacata 41712678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 183 - 270
Target Start/End: Complemental strand, 4779005 - 4778918
Alignment:
Q  183 catcgttaaagatgtaaatggtgaatctgcgaacaaattcacaacacataagttaataacataaaacaatacaatgcctacaaataat 270  Q
    ||||| |||| | ||||| |||||||||||||||||| ||||| |||  || ||||||||||| |||   | ||||||||||||||||    
T  4779005 catcgctaaaaacgtaaagggtgaatctgcgaacaaactcacagcacccaaattaataacatacaacggcaaaatgcctacaaataat 4778918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 183 - 270
Target Start/End: Original strand, 11985081 - 11985168
Alignment:
Q  183 catcgttaaagatgtaaatggtgaatctgcgaacaaattcacaacacataagttaataacataaaacaatacaatgcctacaaataat 270  Q
    ||||| |||| | ||||||| ||||| |||||||||||||||||||   |||||||||  ||| ||||  | ||||||||||||||||    
T  11985081 catcgctaaaaacgtaaatgatgaatttgcgaacaaattcacaacatccaagttaataggatacaacagcaaaatgcctacaaataat 11985168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 128 - 270
Target Start/End: Original strand, 17248931 - 17249082
Alignment:
Q  128 ttttatttttataaaaacaaaatgatatttattcattcaaattgatagagcacatc---------atcgttaaagatgtaaatggtgaatctgcgaacaa 218  Q
    |||| |||||||||||| ||||||||||| |||||||||||| |||| |  |||||         |||| |||| | ||||||| |||||||||||||||    
T  17248931 ttttctttttataaaaataaaatgatattcattcattcaaatcgataaaatacatcagaatcaagatcgctaaaaacgtaaatgatgaatctgcgaacaa 17249030  T
Q  219 attcacaacacataagttaataacataaaacaatacaatgcctacaaataat 270  Q
    | ||||| |||  ||||||||| |||| |||   | |||| |||||||||||    
T  17249031 actcacagcacccaagttaatagcatacaacggcaaaatgtctacaaataat 17249082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 133 - 176
Target Start/End: Complemental strand, 21612550 - 21612507
Alignment:
Q  133 tttttataaaaacaaaatgatatttattcattcaaattgataga 176  Q
    |||||| | |||||||| ||||||||||||||||||||||||||    
T  21612550 tttttacataaacaaaacgatatttattcattcaaattgataga 21612507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 133 - 184
Target Start/End: Original strand, 31193124 - 31193175
Alignment:
Q  133 tttttataaaaacaaaatgatatttattcattcaaattgatagagcacatca 184  Q
    |||||| |||||||||| |||||| |||||||||||| ||||||| ||||||    
T  31193124 tttttacaaaaacaaaacgatattcattcattcaaatcgatagagtacatca 31193175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 140 - 268
Target Start/End: Complemental strand, 35220633 - 35220495
Alignment:
Q  140 aaaaacaaaatgatatttattcattcaaattgatagagcacatca----------tcgttaaagatgtaaatggtgaatctgcgaacaaattcacaacac 229  Q
    |||||||||| || ||| |||||||||||||||||||| ||||||          ||| |||| | ||||| ||||||| |||||||||| ||||| |||    
T  35220633 aaaaacaaaacgacattcattcattcaaattgatagagtacatcagatacaaagatcgctaaaaacgtaaagggtgaatatgcgaacaaactcacagcac 35220534  T
Q  230 ataagttaataacataaaacaatacaatgcctacaaata 268  Q
      ||||||||| |||| ||| | | ||||||||||||||    
T  35220533 ccaagttaatagcatacaacgacaaaatgcctacaaata 35220495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 196 - 270
Target Start/End: Original strand, 5427730 - 5427804
Alignment:
Q  196 gtaaatggtgaatctgcgaacaaattcacaacacataagttaataacataaaacaatacaatgcctacaaataat 270  Q
    ||||| |||||||||||||||||| ||||| |||  ||||||||| |||| ||| ||| ||||| | ||||||||    
T  5427730 gtaaagggtgaatctgcgaacaaactcacagcacccaagttaatagcatacaacgataaaatgcttgcaaataat 5427804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 196 - 270
Target Start/End: Complemental strand, 36692113 - 36692039
Alignment:
Q  196 gtaaatggtgaatctgcgaacaaattcacaacacataagttaataacataaaacaatacaatgcctacaaataat 270  Q
    ||||| |||||||||| ||||||| ||||||||   ||||||||| ||||||||   | ||||||||||||||||    
T  36692113 gtaaagggtgaatctgtgaacaaactcacaacaaccaagttaatagcataaaacggcaaaatgcctacaaataat 36692039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 169
Target Start/End: Original strand, 7015488 - 7015517
Alignment:
Q  140 aaaaacaaaatgatatttattcattcaaat 169  Q
    ||||||||||||||||||||||||||||||    
T  7015488 aaaaacaaaatgatatttattcattcaaat 7015517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 184
Target Start/End: Original strand, 10286678 - 10286711
Alignment:
Q  151 gatatttattcattcaaattgatagagcacatca 184  Q
    ||||||||||||||||||||||||||| ||||||    
T  10286678 gatatttattcattcaaattgatagagtacatca 10286711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 184
Target Start/End: Original strand, 11550340 - 11550377
Alignment:
Q  147 aaatgatatttattcattcaaattgatagagcacatca 184  Q
    |||||||||| |||||||||||||||||||| ||||||    
T  11550340 aaatgatattcattcattcaaattgatagagtacatca 11550377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 177
Target Start/End: Original strand, 12553964 - 12554001
Alignment:
Q  140 aaaaacaaaatgatatttattcattcaaattgatagag 177  Q
    ||||| ||||||||||| ||||||||||||||||||||    
T  12553964 aaaaataaaatgatattcattcattcaaattgatagag 12554001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 174
Target Start/End: Complemental strand, 15750225 - 15750184
Alignment:
Q  133 tttttataaaaacaaaatgatatttattcattcaaattgata 174  Q
    ||||||||||||  |||||||||||||||||| |||||||||    
T  15750225 tttttataaaaattaaatgatatttattcatttaaattgata 15750184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 263 - 296
Target Start/End: Original strand, 19062345 - 19062378
Alignment:
Q  263 caaataattgattgaatttgtaattgactgatgt 296  Q
    ||||| ||||||||||||||||||||||||||||    
T  19062345 caaatcattgattgaatttgtaattgactgatgt 19062378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 169
Target Start/End: Original strand, 21570173 - 21570214
Alignment:
Q  128 ttttatttttataaaaacaaaatgatatttattcattcaaat 169  Q
    |||| |||||| ||||||||||||||||| ||||||||||||    
T  21570173 ttttttttttacaaaaacaaaatgatattcattcattcaaat 21570214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 169
Target Start/End: Complemental strand, 27949742 - 27949701
Alignment:
Q  128 ttttatttttataaaaacaaaatgatatttattcattcaaat 169  Q
    |||| |||||||||||||||||||||||| ||||||| ||||    
T  27949742 ttttttttttataaaaacaaaatgatattcattcatttaaat 27949701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 270
Target Start/End: Complemental strand, 31788761 - 31788621
Alignment:
Q  140 aaaaacaaaatgatatttattcattcaaattgatagagcacat----------catcgttaaagatgtaaatggtgaatctgcgaacaaattcacaacac 229  Q
    |||||||||| |||||| |||||||||||| ||||||| ||||          ||||| |||| | ||||| |||||||||||||||||| ||||| ||     
T  31788761 aaaaacaaaacgatattcattcattcaaatcgatagagtacatcagatacaaacatcgctaaaaacgtaaagggtgaatctgcgaacaaactcacagcat 31788662  T
Q  230 ataagttaataacataaaacaatacaatgcctacaaataat 270  Q
      ||||||||| |||| |||   | ||||||||||||||||    
T  31788661 ccaagttaatagcatacaacggcaaaatgcctacaaataat 31788621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 177
Target Start/End: Complemental strand, 34480423 - 34480375
Alignment:
Q  128 ttttatttttataaaaacaaaatgatatttattcattcaaattgatagag 177  Q
    ||||||||||||||||| ||| ||||||| |||| |||||||||||||||    
T  34480423 ttttatttttataaaaataaa-tgatattcattcgttcaaattgatagag 34480375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 182
Target Start/End: Original strand, 34962642 - 34962690
Alignment:
Q  133 tttttataaaaacaaaatgatatttattcattcaaattgatagagcacat 182  Q
    |||||||||||| ||| ||||||| |||||||||||||||||||| ||||    
T  34962642 tttttataaaaataaa-tgatattcattcattcaaattgatagagtacat 34962690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 169
Target Start/End: Original strand, 38575251 - 38575292
Alignment:
Q  128 ttttatttttataaaaacaaaatgatatttattcattcaaat 169  Q
    |||| |||| ||||||||||||||||||| ||||||||||||    
T  38575251 tttttttttgataaaaacaaaatgatattcattcattcaaat 38575292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 177
Target Start/End: Complemental strand, 41328044 - 41328007
Alignment:
Q  140 aaaaacaaaatgatatttattcattcaaattgatagag 177  Q
    |||||||||| |||||| ||||||||||||||||||||    
T  41328044 aaaaacaaaacgatattcattcattcaaattgatagag 41328007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 147 - 183
Target Start/End: Original strand, 4878408 - 4878444
Alignment:
Q  147 aaatgatatttattcattcaaattgatagagcacatc 183  Q
    |||||||||| |||||||||||||||||||| |||||    
T  4878408 aaatgatattcattcattcaaattgatagagtacatc 4878444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 264 - 296
Target Start/End: Complemental strand, 7646579 - 7646547
Alignment:
Q  264 aaataattgattgaatttgtaattgactgatgt 296  Q
    |||| ||||||||||||||||||||||||||||    
T  7646579 aaatcattgattgaatttgtaattgactgatgt 7646547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 146 - 182
Target Start/End: Complemental strand, 8809580 - 8809544
Alignment:
Q  146 aaaatgatatttattcattcaaattgatagagcacat 182  Q
    ||||||||||| |||||||||||||||||||| ||||    
T  8809580 aaaatgatattcattcattcaaattgatagagtacat 8809544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 147 - 183
Target Start/End: Complemental strand, 12366308 - 12366272
Alignment:
Q  147 aaatgatatttattcattcaaattgatagagcacatc 183  Q
    |||||||||| |||||||||||||||||||| |||||    
T  12366308 aaatgatattcattcattcaaattgatagagtacatc 12366272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 176
Target Start/End: Complemental strand, 14955845 - 14955809
Alignment:
Q  140 aaaaacaaaatgatatttattcattcaaattgataga 176  Q
    ||||||||||||||||| ||||||| |||||||||||    
T  14955845 aaaaacaaaatgatattcattcatttaaattgataga 14955809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 147 - 183
Target Start/End: Complemental strand, 15920314 - 15920278
Alignment:
Q  147 aaatgatatttattcattcaaattgatagagcacatc 183  Q
    |||||||||| |||||||||||||||||||| |||||    
T  15920314 aaatgatattcattcattcaaattgatagagtacatc 15920278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 147 - 183
Target Start/End: Original strand, 18141155 - 18141191
Alignment:
Q  147 aaatgatatttattcattcaaattgatagagcacatc 183  Q
    |||||||||| |||||||||||||||||||| |||||    
T  18141155 aaatgatattcattcattcaaattgatagagtacatc 18141191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 270
Target Start/End: Complemental strand, 19598064 - 19598004
Alignment:
Q  210 tgcgaacaaattcacaacacataagttaataacataaaacaatacaatgcctacaaataat 270  Q
    ||||||||||||||||||||  ||||||||| |||| |||  || |||| |||||||||||    
T  19598064 tgcgaacaaattcacaacactcaagttaatagcatacaacggtaaaatgtctacaaataat 19598004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 172
Target Start/End: Original strand, 26025273 - 26025305
Alignment:
Q  140 aaaaacaaaatgatatttattcattcaaattga 172  Q
    ||||||||||||||||| |||||||||||||||    
T  26025273 aaaaacaaaatgatattcattcattcaaattga 26025305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 194 - 270
Target Start/End: Original strand, 30399888 - 30399964
Alignment:
Q  194 atgtaaatggtgaatctgcgaacaaattcacaacacataagttaataacataaaacaatacaatgcctacaaataat 270  Q
    ||||||| | |||||||||||||||| | ||||||| ||||||||| |||||  ||   | ||||||||||||||||    
T  30399888 atgtaaaggatgaatctgcgaacaaacttacaacacctaagttaatgacatacgacggcaaaatgcctacaaataat 30399964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 128 - 184
Target Start/End: Complemental strand, 36692191 - 36692135
Alignment:
Q  128 ttttatttttataaaaacaaaatgatatttattcattcaaattgatagagcacatca 184  Q
    |||| |||||| |||||||||| |||||  |||||||||||| ||||||| ||||||    
T  36692191 ttttttttttacaaaaacaaaacgatatacattcattcaaatcgatagagtacatca 36692135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 176
Target Start/End: Complemental strand, 37994588 - 37994552
Alignment:
Q  140 aaaaacaaaatgatatttattcattcaaattgataga 176  Q
    |||||||||| |||||| |||||||||||||||||||    
T  37994588 aaaaacaaaacgatattcattcattcaaattgataga 37994552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 45; Significance: 1e-16; HSPs: 48)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 140 - 269
Target Start/End: Original strand, 30568113 - 30568252
Alignment:
Q  140 aaaaacaaaatgatatttattcattcaaattgatagagcacatcat----------cgttaaagatgtaaatggtgaatctgcgaacaaattcacaacac 229  Q
    ||||||||||||||||| |||||||||||||||||||  |||||||          || |||| | ||||| |||||||||||||||||| |||||||||    
T  30568113 aaaaacaaaatgatattcattcattcaaattgatagattacatcatatacaaacatcgctaaaaacgtaaagggtgaatctgcgaacaaactcacaacac 30568212  T
Q  230 ataagttaataacataaaacaatacaatgcctacaaataa 269  Q
      ||||||||| ||||||||   | |||||||||||||||    
T  30568213 ccaagttaatagcataaaacggcaaaatgcctacaaataa 30568252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 195 - 270
Target Start/End: Complemental strand, 23230875 - 23230800
Alignment:
Q  195 tgtaaatggtgaatctgcgaacaaattcacaacacataagttaataacataaaacaatacaatgcctacaaataat 270  Q
    ||||||||||||||||||||||||| |||||||||  ||||||||| |||| ||| | | ||||||||||||||||    
T  23230875 tgtaaatggtgaatctgcgaacaaactcacaacacccaagttaatagcatacaacgacaaaatgcctacaaataat 23230800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 183 - 270
Target Start/End: Original strand, 45445656 - 45445743
Alignment:
Q  183 catcgttaaagatgtaaatggtgaatctgcgaacaaattcacaacacataagttaataacataaaacaatacaatgcctacaaataat 270  Q
    |||||||||| | ||||| ||||||| |||||||||| ||||||||   ||||||||| |||||||||| | ||||||||||||||||    
T  45445656 catcgttaaaaacgtaaaaggtgaatatgcgaacaaactcacaacatccaagttaatagcataaaacaacaaaatgcctacaaataat 45445743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 188 - 270
Target Start/End: Complemental strand, 37971522 - 37971440
Alignment:
Q  188 ttaaagatgtaaatggtgaatctgcgaacaaattcacaacacataagttaataacataaaacaatacaatgcctacaaataat 270  Q
    ||||| ||||||| |||||||||||||||||| |||||||||  ||||||||| |||| |||   | ||||||||||||||||    
T  37971522 ttaaaaatgtaaagggtgaatctgcgaacaaactcacaacacccaagttaatagcatacaacggcaaaatgcctacaaataat 37971440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 128 - 177
Target Start/End: Complemental strand, 2120610 - 2120561
Alignment:
Q  128 ttttatttttataaaaacaaaatgatatttattcattcaaattgatagag 177  Q
    |||| |||||||||||||||||||||| ||||||||| ||||||||||||    
T  2120610 ttttttttttataaaaacaaaatgataattattcatttaaattgatagag 2120561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 205 - 270
Target Start/End: Original strand, 29617141 - 29617206
Alignment:
Q  205 gaatctgcgaacaaattcacaacacataagttaataacataaaacaatacaatgcctacaaataat 270  Q
    ||||||||||||||| ||||||||  |||||||||| |||| ||||| | ||||||||||||||||    
T  29617141 gaatctgcgaacaaactcacaacatttaagttaatagcatacaacaacaaaatgcctacaaataat 29617206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 202 - 270
Target Start/End: Complemental strand, 41896742 - 41896674
Alignment:
Q  202 ggtgaatctgcgaacaaattcacaacacataagttaataacataaaacaatacaatgcctacaaataat 270  Q
    |||||||||||||||||| |||||||||  ||||||||| |||| ||| | | ||||||||||||||||    
T  41896742 ggtgaatctgcgaacaaactcacaacacccaagttaatagcatacaacgacaaaatgcctacaaataat 41896674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 140 - 270
Target Start/End: Complemental strand, 15344606 - 15344465
Alignment:
Q  140 aaaaacaaaatgatatttattcattcaaattgatagagcacatc-----------atcgttaaagatgtaaatggtgaatctgcgaacaaattcacaaca 228  Q
    ||||| |||||||||||||||||||||||||||||||  |||||           |||| |||| | ||||| | |||||||||||||||| ||||| ||    
T  15344606 aaaaataaaatgatatttattcattcaaattgatagaatacatcagaatcaaaagatcgctaaaaacgtaaaggatgaatctgcgaacaaactcacagca 15344507  T
Q  229 cataagttaataacataaaacaatacaatgcctacaaataat 270  Q
    |  ||||||||| |||| ||| | | ||||||||||||||||    
T  15344506 cccaagttaatagcatacaacgacaaaatgcctacaaataat 15344465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 140 - 270
Target Start/End: Complemental strand, 15433671 - 15433530
Alignment:
Q  140 aaaaacaaaatgatatttattcattcaaattgatagagcacatc-----------atcgttaaagatgtaaatggtgaatctgcgaacaaattcacaaca 228  Q
    ||||| |||||||||||||||||||||||||||||||  |||||           |||| |||| | ||||| | |||||||||||||||| ||||| ||    
T  15433671 aaaaataaaatgatatttattcattcaaattgatagaatacatcagaatcaaaagatcgctaaaaacgtaaaggatgaatctgcgaacaaactcacagca 15433572  T
Q  229 cataagttaataacataaaacaatacaatgcctacaaataat 270  Q
    |  ||||||||| |||| ||| | | ||||||||||||||||    
T  15433571 cccaagttaatagcatacaacgacaaaatgcctacaaataat 15433530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 140 - 270
Target Start/End: Complemental strand, 15524975 - 15524834
Alignment:
Q  140 aaaaacaaaatgatatttattcattcaaattgatagagcacatc-----------atcgttaaagatgtaaatggtgaatctgcgaacaaattcacaaca 228  Q
    ||||| |||||||||||||||||||||||||||||||  |||||           |||| |||| | ||||| | |||||||||||||||| ||||| ||    
T  15524975 aaaaataaaatgatatttattcattcaaattgatagaatacatcagaatcaaaagatcgctaaaaacgtaaaggatgaatctgcgaacaaactcacagca 15524876  T
Q  229 cataagttaataacataaaacaatacaatgcctacaaataat 270  Q
    |  ||||||||| |||| ||| | | ||||||||||||||||    
T  15524875 cccaagttaatagcatacaacgacaaaatgcctacaaataat 15524834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 196 - 270
Target Start/End: Original strand, 25190923 - 25190997
Alignment:
Q  196 gtaaatggtgaatctgcgaacaaattcacaacacataagttaataacataaaacaatacaatgcctacaaataat 270  Q
    ||||| |||||||||||||||||| ||||| |||  ||||||||| ||||||| |  | ||||||||||||||||    
T  25190923 gtaaaaggtgaatctgcgaacaaactcacagcacccaagttaatagcataaaatagaaaaatgcctacaaataat 25190997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 196 - 270
Target Start/End: Original strand, 31013466 - 31013540
Alignment:
Q  196 gtaaatggtgaatctgcgaacaaattcacaacacataagttaataacataaaacaatacaatgcctacaaataat 270  Q
    ||||| |||||||||||||||||| |||||||||  ||||||||| |||| |||   | ||||||||||||||||    
T  31013466 gtaaagggtgaatctgcgaacaaactcacaacacccaagttaatagcatacaacggcaaaatgcctacaaataat 31013540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 131 - 181
Target Start/End: Complemental strand, 31975235 - 31975185
Alignment:
Q  131 tatttttataaaaacaaaatgatatttattcattcaaattgatagagcaca 181  Q
    ||||| |||| ||| ||||||||||||||||||||||||||||| ||||||    
T  31975235 tatttctatacaaagaaaatgatatttattcattcaaattgatatagcaca 31975185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 128 - 174
Target Start/End: Original strand, 34680653 - 34680699
Alignment:
Q  128 ttttatttttataaaaacaaaatgatatttattcattcaaattgata 174  Q
    ||||||||||| ||||| ||||||||||| |||||||||||||||||    
T  34680653 ttttatttttacaaaaataaaatgatattcattcattcaaattgata 34680699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 197 - 270
Target Start/End: Complemental strand, 5046983 - 5046910
Alignment:
Q  197 taaatggtgaatctgcgaacaaattcacaacacataagttaataacataaaacaatacaatgcctacaaataat 270  Q
    |||||| | ||||| |||||||| ||||| |||  |||||||||||||| ||| ||| ||||||||||||||||    
T  5046983 taaatgataaatcttcgaacaaactcacatcacccaagttaataacatacaacgataaaatgcctacaaataat 5046910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 140 - 185
Target Start/End: Original strand, 44099713 - 44099758
Alignment:
Q  140 aaaaacaaaatgatatttattcattcaaattgatagagcacatcat 185  Q
    ||||||||||||||||||||||||||||||||| |||  |||||||    
T  44099713 aaaaacaaaatgatatttattcattcaaattgagagattacatcat 44099758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 128 - 184
Target Start/End: Original strand, 9637189 - 9637245
Alignment:
Q  128 ttttatttttataaaaacaaaatgatatttattcattcaaattgatagagcacatca 184  Q
    |||| |||||| |||||||||| |||||| ||||||| |||||||||||| ||||||    
T  9637189 ttttttttttacaaaaacaaaacgatattcattcatttaaattgatagagtacatca 9637245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 270
Target Start/End: Original strand, 18890563 - 18890631
Alignment:
Q  202 ggtgaatctgcgaacaaattcacaacacataagttaataacataaaacaatacaatgcctacaaataat 270  Q
    |||||||||||||||||| ||||| |||  ||||||||| |||| ||| | | ||||||||||||||||    
T  18890563 ggtgaatctgcgaacaaactcacagcacccaagttaatagcatacaacgacaaaatgcctacaaataat 18890631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 270
Target Start/End: Original strand, 39646032 - 39646120
Alignment:
Q  182 tcatcgttaaagatgtaaatggtgaatctgcgaacaaattcacaacacataagttaataacataaaacaatacaatgcctacaaataat 270  Q
    |||||| |||| ||||||||||  ||||| |||||||| |||||||||  ||||||| |||||| ||||| | |||  |||||||||||    
T  39646032 tcatcgctaaatatgtaaatggaaaatctacgaacaaactcacaacacccaagttaacaacatataacaacaaaatagctacaaataat 39646120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 183 - 270
Target Start/End: Original strand, 16928602 - 16928689
Alignment:
Q  183 catcgttaaagatgtaaatggtgaatctgcgaacaaattcacaacacataagttaataacataaaacaatacaatgcctacaaataat 270  Q
    ||||| |||| | ||||| |||||||||||||||||| |||||||||  ||||||||| |||| ||    | ||||||||||||||||    
T  16928602 catcgctaaaaacgtaaagggtgaatctgcgaacaaactcacaacacccaagttaatagcatacaatggcaaaatgcctacaaataat 16928689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 133 - 184
Target Start/End: Original strand, 19443838 - 19443889
Alignment:
Q  133 tttttataaaaacaaaatgatatttattcattcaaattgatagagcacatca 184  Q
    |||||| ||||| |||| |||||| |||||||||||||||||||| ||||||    
T  19443838 tttttacaaaaataaaacgatattcattcattcaaattgatagagtacatca 19443889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 183 - 270
Target Start/End: Original strand, 33347366 - 33347453
Alignment:
Q  183 catcgttaaagatgtaaatggtgaatctgcgaacaaattcacaacacataagttaataacataaaacaatacaatgcctacaaataat 270  Q
    ||||| |||| | ||||| |||||||||||||||||| ||| ||||| ||| |||||| |||| ||  | | ||||||||||||||||    
T  33347366 catcgctaaaaaggtaaaaggtgaatctgcgaacaaactcataacacctaatttaatagcatacaatgacaaaatgcctacaaataat 33347453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 135 - 174
Target Start/End: Complemental strand, 34610149 - 34610110
Alignment:
Q  135 tttataaaaacaaaatgatatttattcattcaaattgata 174  Q
    |||| |||||||||| ||||||||||||||||||||||||    
T  34610149 tttacaaaaacaaaacgatatttattcattcaaattgata 34610110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 183
Target Start/End: Original strand, 7579517 - 7579559
Alignment:
Q  141 aaaacaaaatgatatttattcattcaaattgatagagcacatc 183  Q
    ||||| |||||||||| |||||||||||||||||||| |||||    
T  7579517 aaaactaaatgatattcattcattcaaattgatagagtacatc 7579559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 128 - 174
Target Start/End: Complemental strand, 12654382 - 12654336
Alignment:
Q  128 ttttatttttataaaaacaaaatgatatttattcattcaaattgata 174  Q
    |||| |||||| ||||| |||||||||||||||||||||||| ||||    
T  12654382 ttttttttttacaaaaataaaatgatatttattcattcaaatcgata 12654336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 140 - 270
Target Start/End: Original strand, 17693405 - 17693546
Alignment:
Q  140 aaaaacaaaatgatatttattcattcaaattgatagagcacat----------catcgttaaagatgtaaatggtgaatctgcgaacaaattcacaacac 229  Q
    |||||||||| |||||| ||||| |||||||||||||| ||||          ||||| |||| |||||||  |||||||| ||| |||| ||||||||     
T  17693405 aaaaacaaaacgatattcattcactcaaattgatagagtacatcaaatacaaacatcgctaaaaatgtaaagagtgaatctacgaccaaactcacaacat 17693504  T
Q  230 ataagttaataacataaaacaa-tacaatgcctacaaataat 270  Q
      |||||||||||||| |||||  | ||||||||||||||||    
T  17693505 ccaagttaataacatacaacaacaaaaatgcctacaaataat 17693546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 204 - 270
Target Start/End: Original strand, 27110331 - 27110397
Alignment:
Q  204 tgaatctgcgaacaaattcacaacacataagttaataacataaaacaatacaatgcctacaaataat 270  Q
    ||||| |||||||||| |||||||||  ||||||||| |||| ||| ||| |||| |||||||||||    
T  27110331 tgaatatgcgaacaaactcacaacacccaagttaatagcatacaacgataaaatgtctacaaataat 27110397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 245
Target Start/End: Complemental strand, 33299099 - 33299049
Alignment:
Q  195 tgtaaatggtgaatctgcgaacaaattcacaacacataagttaataacata 245  Q
    |||||||| |||||||||||||||| ||||||||  |||||||||| ||||    
T  33299099 tgtaaatgatgaatctgcgaacaaactcacaacatctaagttaatagcata 33299049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 204 - 266
Target Start/End: Complemental strand, 34612040 - 34611978
Alignment:
Q  204 tgaatctgcgaacaaattcacaacacataagttaataacataaaacaatacaatgcctacaaa 266  Q
    |||||||||||||||| ||||||||   ||||||||| |||| ||||| | ||||||||||||    
T  34612040 tgaatctgcgaacaaactcacaacatccaagttaatagcatataacaagataatgcctacaaa 34611978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 196 - 270
Target Start/End: Original strand, 43833854 - 43833928
Alignment:
Q  196 gtaaatggtgaatctgcgaacaaattcacaacacataagttaataacataaaacaatacaatgcctacaaataat 270  Q
    ||||||||||||||||| |||||| ||||| |||  ||||||||| |||| |||   | ||||||||||||||||    
T  43833854 gtaaatggtgaatctgcaaacaaactcacagcacccaagttaatagcatacaacggcaaaatgcctacaaataat 43833928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 184
Target Start/End: Original strand, 9799685 - 9799722
Alignment:
Q  147 aaatgatatttattcattcaaattgatagagcacatca 184  Q
    |||||||||| |||||||||||||||||||| ||||||    
T  9799685 aaatgatattcattcattcaaattgatagagtacatca 9799722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 185
Target Start/End: Complemental strand, 19876505 - 19876460
Alignment:
Q  140 aaaaacaaaatgatatttattcattcaaattgatagagcacatcat 185  Q
    ||||| ||||||||||||||||||||||||||| |||  |||||||    
T  19876505 aaaaataaaatgatatttattcattcaaattgagagattacatcat 19876460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 297
Target Start/End: Original strand, 36948428 - 36948461
Alignment:
Q  264 aaataattgattgaatttgtaattgactgatgtc 297  Q
    |||| |||||||||||||||||||||||||||||    
T  36948428 aaatcattgattgaatttgtaattgactgatgtc 36948461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 176
Target Start/End: Original strand, 1236490 - 1236526
Alignment:
Q  140 aaaaacaaaatgatatttattcattcaaattgataga 176  Q
    ||||||||||||||||| |||||||||||| ||||||    
T  1236490 aaaaacaaaatgatattcattcattcaaatcgataga 1236526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 148 - 176
Target Start/End: Complemental strand, 3028436 - 3028408
Alignment:
Q  148 aatgatatttattcattcaaattgataga 176  Q
    |||||||||||||||||||||||||||||    
T  3028436 aatgatatttattcattcaaattgataga 3028408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 147 - 183
Target Start/End: Complemental strand, 5457511 - 5457475
Alignment:
Q  147 aaatgatatttattcattcaaattgatagagcacatc 183  Q
    |||||||||| |||||||||||||||||||| |||||    
T  5457511 aaatgatattcattcattcaaattgatagagtacatc 5457475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 183
Target Start/End: Complemental strand, 5526259 - 5526227
Alignment:
Q  151 gatatttattcattcaaattgatagagcacatc 183  Q
    ||||||||||||||||||||||||||| |||||    
T  5526259 gatatttattcattcaaattgatagagtacatc 5526227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 249
Target Start/End: Original strand, 8412381 - 8412433
Alignment:
Q  197 taaatggtgaatctgcgaacaaattcacaacacataagttaataacataaaac 249  Q
    |||| ||||||||||| |||||| |||||||||  ||||||||| ||||||||    
T  8412381 taaagggtgaatctgcaaacaaactcacaacacccaagttaatagcataaaac 8412433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 176
Target Start/End: Complemental strand, 10331382 - 10331346
Alignment:
Q  140 aaaaacaaaatgatatttattcattcaaattgataga 176  Q
    ||||||||| ||||||||||| |||||||||||||||    
T  10331382 aaaaacaaattgatatttatttattcaaattgataga 10331346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 141 - 177
Target Start/End: Original strand, 15596946 - 15596982
Alignment:
Q  141 aaaacaaaatgatatttattcattcaaattgatagag 177  Q
    ||||||||| |||||| ||||||||||||||||||||    
T  15596946 aaaacaaaacgatattcattcattcaaattgatagag 15596982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 206 - 266
Target Start/End: Original strand, 23851344 - 23851404
Alignment:
Q  206 aatctgcgaacaaattcacaacacataagttaataacataaaacaatacaatgcctacaaa 266  Q
    |||||||||||||| ||||||||  |||||||||| |||| ||| | | ||||||||||||    
T  23851344 aatctgcgaacaaactcacaacatctaagttaatagcatataacgacataatgcctacaaa 23851404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 184
Target Start/End: Original strand, 27498158 - 27498202
Alignment:
Q  140 aaaaacaaaatgatatttattcattcaaattgatagagcacatca 184  Q
    ||||| ||||| ||||| |||||||||||||||||||| ||||||    
T  27498158 aaaaataaaataatattcattcattcaaattgatagagtacatca 27498202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 147 - 183
Target Start/End: Original strand, 28296783 - 28296819
Alignment:
Q  147 aaatgatatttattcattcaaattgatagagcacatc 183  Q
    |||||||||| |||||||||||||||||||| |||||    
T  28296783 aaatgatattcattcattcaaattgatagagtacatc 28296819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 147 - 183
Target Start/End: Original strand, 31712748 - 31712784
Alignment:
Q  147 aaatgatatttattcattcaaattgatagagcacatc 183  Q
    |||||||||| |||||||||||||||||||| |||||    
T  31712748 aaatgatattcattcattcaaattgatagagtacatc 31712784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 134 - 182
Target Start/End: Original strand, 33214457 - 33214505
Alignment:
Q  134 ttttataaaaacaaaatgatatttattcattcaaattgatagagcacat 182  Q
    ||||| |||||||||| |||||| |||||||||||| ||||||| ||||    
T  33214457 ttttagaaaaacaaaacgatattcattcattcaaatcgatagagtacat 33214505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 141 - 177
Target Start/End: Original strand, 35141661 - 35141697
Alignment:
Q  141 aaaacaaaatgatatttattcattcaaattgatagag 177  Q
    |||| ||||||||||||||||||||| ||||||||||    
T  35141661 aaaataaaatgatatttattcattcatattgatagag 35141697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 184
Target Start/End: Original strand, 40211092 - 40211136
Alignment:
Q  140 aaaaacaaaatgatatttattcattcaaattgatagagcacatca 184  Q
    |||||||||| |||||| |||||||||||| ||||||| ||||||    
T  40211092 aaaaacaaaacgatattcattcattcaaatcgatagagtacatca 40211136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 176
Target Start/End: Original strand, 40618865 - 40618901
Alignment:
Q  140 aaaaacaaaatgatatttattcattcaaattgataga 176  Q
    |||||||||| |||||| |||||||||||||||||||    
T  40618865 aaaaacaaaacgatattcattcattcaaattgataga 40618901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 44; Significance: 5e-16; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 183 - 270
Target Start/End: Complemental strand, 40993401 - 40993314
Alignment:
Q  183 catcgttaaagatgtaaatggtgaatctgcgaacaaattcacaacacataagttaataacataaaacaatacaatgcctacaaataat 270  Q
    ||||| |||| | ||||| |||||||||||||||||| |||||||||  |||||||||||||| ||| | | ||||||||||||||||    
T  40993401 catcgctaaaaacgtaaagggtgaatctgcgaacaaactcacaacacccaagttaataacatacaacgacaaaatgcctacaaataat 40993314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 133 - 184
Target Start/End: Original strand, 25286975 - 25287026
Alignment:
Q  133 tttttataaaaacaaaatgatatttattcattcaaattgatagagcacatca 184  Q
    |||||||||||| |||| ||||||||||||||||||||||||||| ||||||    
T  25286975 tttttataaaaataaaacgatatttattcattcaaattgatagagtacatca 25287026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 140 - 270
Target Start/End: Original strand, 48316613 - 48316746
Alignment:
Q  140 aaaaacaaaatgatatttattcattcaaattgatagagcacat---catcgttaaagatgtaaatggtgaatctgcgaacaaattcacaacacataagtt 236  Q
    |||||||||| |||||| |||||||||||| ||||||| | |    ||||| |||| |  |||| |||||||||||||||||| ||||| |||  |||||    
T  48316613 aaaaacaaaacgatattcattcattcaaatcgatagagtatacaaacatcgctaaaaacctaaagggtgaatctgcgaacaaactcacagcacccaagtt 48316712  T
Q  237 aataacataaaacaatacaatgcctacaaataat 270  Q
    |||| |||| ||| | | ||||||||||||||||    
T  48316713 aatagcatacaacgacaaaatgcctacaaataat 48316746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 140 - 270
Target Start/End: Original strand, 34899401 - 34899541
Alignment:
Q  140 aaaaacaaaatgatatttattcattcaaattgatagagcacat----------catcgttaaagatgtaaatggtgaatctgcgaacaaattcacaacac 229  Q
    ||||| |||||||||||||||||||||||||||||||| ||||          ||||| |||| | ||||| |||||||||||||||||| ||||||||     
T  34899401 aaaaataaaatgatatttattcattcaaattgatagagtacatcaaatacaaacatcgctaaaaacgtaaagggtgaatctgcgaacaaactcacaacat 34899500  T
Q  230 ataagttaataacataaaacaatacaatgcctacaaataat 270  Q
      ||||||||| |||| |||   | ||||| ||||||||||    
T  34899501 ccaagttaatagcatacaacggcaaaatgcatacaaataat 34899541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 128 - 185
Target Start/End: Complemental strand, 35261609 - 35261552
Alignment:
Q  128 ttttatttttataaaaacaaaatgatatttattcattcaaattgatagagcacatcat 185  Q
    |||| |||||| ||||||| ||||||||| |||||||||||||||||||| |||||||    
T  35261609 ttttttttttacaaaaacagaatgatattcattcattcaaattgatagagtacatcat 35261552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 133 - 185
Target Start/End: Complemental strand, 20083645 - 20083593
Alignment:
Q  133 tttttataaaaacaaaatgatatttattcattcaaattgatagagcacatcat 185  Q
    |||||| |||||||||||||||||||||||||||||| |||| || |||||||    
T  20083645 tttttacaaaaacaaaatgatatttattcattcaaatcgatatagtacatcat 20083593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 128 - 184
Target Start/End: Original strand, 28407700 - 28407756
Alignment:
Q  128 ttttatttttataaaaacaaaatgatatttattcattcaaattgatagagcacatca 184  Q
    |||| |||| |||||||||||| |||||| |||||||||||||||||||| ||||||    
T  28407700 tttttttttgataaaaacaaaacgatattcattcattcaaattgatagagtacatca 28407756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 125 - 184
Target Start/End: Original strand, 12141086 - 12141145
Alignment:
Q  125 tacttttatttttataaaaacaaaatgatatttattcattcaaattgatagagcacatca 184  Q
    ||||||| |||||| |||||||||| |||||| |||||||||||| ||||||| ||||||    
T  12141086 tacttttttttttacaaaaacaaaacgatattcattcattcaaatcgatagagtacatca 12141145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 196 - 270
Target Start/End: Original strand, 45349659 - 45349733
Alignment:
Q  196 gtaaatggtgaatctgcgaacaaattcacaacacataagttaataacataaaacaatacaatgcctacaaataat 270  Q
    ||||| |||||| ||||||||||| |||||||||  ||||||||| ||||||||   | ||||||||||||||||    
T  45349659 gtaaagggtgaacctgcgaacaaactcacaacacccaagttaatagcataaaacggcaaaatgcctacaaataat 45349733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 124 - 266
Target Start/End: Original strand, 13592271 - 13592419
Alignment:
Q  124 atacttttatttttataaaaacaaaatgatatttattcattcaaattgatagagcacat------catcgttaaagatgtaaatggtgaatctgcgaaca 217  Q
    |||||||| |||||||||||||||||||| ||  ||||||| |||| ||||||| ||||      ||  | |||| ||||||| | ||||||||||||||    
T  13592271 atacttttttttttataaaaacaaaatgagatccattcattaaaatcgatagagtacatattcaacactgctaaaaatgtaaaggatgaatctgcgaaca 13592370  T
Q  218 aattcacaacacataagttaataacataaaacaatacaatgcctacaaa 266  Q
    || ||||| ||   ||||||||| |||| ||| | | ||||||||||||    
T  13592371 aactcacagcatcgaagttaatagcatataacgacataatgcctacaaa 13592419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 140 - 185
Target Start/End: Complemental strand, 17611691 - 17611646
Alignment:
Q  140 aaaaacaaaatgatatttattcattcaaattgatagagcacatcat 185  Q
    |||||||||| |||||| |||||||||||||||||||| |||||||    
T  17611691 aaaaacaaaacgatattcattcattcaaattgatagagtacatcat 17611646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 197 - 270
Target Start/End: Complemental strand, 19297100 - 19297027
Alignment:
Q  197 taaatggtgaatctgcgaacaaattcacaacacataagttaataacataaaacaatacaatgcctacaaataat 270  Q
    |||| |||||||||||||||||| |||||||||  || |||||| |||| ||||  | ||||||||||||||||    
T  19297100 taaagggtgaatctgcgaacaaactcacaacacccaaattaatagcatataacagcaaaatgcctacaaataat 19297027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 268
Target Start/End: Original strand, 39328653 - 39328725
Alignment:
Q  196 gtaaatggtgaatctgcgaacaaattcacaacacataagttaataacataaaacaatacaatgcctacaaata 268  Q
    ||||| ||| |||||||||||||||||||| |||  ||||||||| ||||||||   | ||||||||||||||    
T  39328653 gtaaaaggtaaatctgcgaacaaattcacagcacccaagttaatagcataaaacggcaaaatgcctacaaata 39328725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 133 - 185
Target Start/End: Complemental strand, 40741873 - 40741821
Alignment:
Q  133 tttttataaaaacaaaatgatatttattcattcaaattgatagagcacatcat 185  Q
    |||||| ||||| ||||||||||| ||||||||||||||||| || |||||||    
T  40741873 tttttacaaaaataaaatgatattaattcattcaaattgatatagtacatcat 40741821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 128 - 184
Target Start/End: Complemental strand, 46700343 - 46700287
Alignment:
Q  128 ttttatttttataaaaacaaaatgatatttattcattcaaattgatagagcacatca 184  Q
    |||| ||||||||||||| ||| |||||| |||||||| ||||||||||| ||||||    
T  46700343 ttttttttttataaaaaccaaacgatattcattcattctaattgatagagtacatca 46700287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 133 - 270
Target Start/End: Complemental strand, 48061726 - 48061579
Alignment:
Q  133 tttttataaaaacaaaatgatatttattcattcaaattgatagagcacat----------catcgttaaagatgtaaatggtgaatctgcgaacaaattc 222  Q
    |||||| |||||||||| |||||| |||||||||||| ||||||| ||||          ||||  |||| | ||||| |||||||||||||||||| ||    
T  48061726 tttttacaaaaacaaaacgatattcattcattcaaatcgatagagtacatcaggtacaaacatctctaaaaacgtaaagggtgaatctgcgaacaaactc 48061627  T
Q  223 acaacacataagttaataacataaaacaatacaatgcctacaaataat 270  Q
    | |||||  ||||||||| |||| |||   | ||||||||||||||||    
T  48061626 ataacacccaagttaatagcatacaacggcaaaatgcctacaaataat 48061579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 134 - 177
Target Start/End: Original strand, 3267005 - 3267048
Alignment:
Q  134 ttttataaaaacaaaatgatatttattcattcaaattgatagag 177  Q
    ||||| ||||||||||||||||| |||||||||||||| |||||    
T  3267005 ttttacaaaaacaaaatgatattcattcattcaaattgttagag 3267048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 196 - 267
Target Start/End: Complemental strand, 25255458 - 25255387
Alignment:
Q  196 gtaaatggtgaatctgcgaacaaattcacaacacataagttaataacataaaacaatacaatgcctacaaat 267  Q
    ||||| |||| ||||||||||||| ||||||||  |||||||||| |||| ||| | | |||||||||||||    
T  25255458 gtaaagggtgtatctgcgaacaaactcacaacatctaagttaatagcatacaacgacaaaatgcctacaaat 25255387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 128 - 183
Target Start/End: Original strand, 30992480 - 30992534
Alignment:
Q  128 ttttatttttataaaaacaaaatgatatttattcattcaaattgatagagcacatc 183  Q
    |||| |||||||||||| ||| ||||||| |||||||||||||||||||| |||||    
T  30992480 ttttttttttataaaaataaa-tgatattcattcattcaaattgatagagtacatc 30992534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 183 - 270
Target Start/End: Complemental strand, 38799025 - 38798938
Alignment:
Q  183 catcgttaaagatgtaaatggtgaatctgcgaacaaattcacaacacataagttaataacataaaacaatacaatgcctacaaataat 270  Q
    |||||||||| | ||| | |||||||||||||||||| ||||||||   ||||||||| ||||| ||   | ||||||||||||||||    
T  38799025 catcgttaaaaacgtacaaggtgaatctgcgaacaaactcacaacatccaagttaatagcataagacggcaaaatgcctacaaataat 38798938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 263 - 293
Target Start/End: Original strand, 5000021 - 5000051
Alignment:
Q  263 caaataattgattgaatttgtaattgactga 293  Q
    |||||||||||||||||||||||||||||||    
T  5000021 caaataattgattgaatttgtaattgactga 5000051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 184
Target Start/End: Complemental strand, 9137849 - 9137816
Alignment:
Q  151 gatatttattcattcaaattgatagagcacatca 184  Q
    ||||||||||||||||||||||||||| ||||||    
T  9137849 gatatttattcattcaaattgatagagtacatca 9137816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 197 - 270
Target Start/End: Original strand, 9449998 - 9450071
Alignment:
Q  197 taaatggtgaatctgcgaacaaattcacaacacataagttaataacataaaacaatacaatgcctacaaataat 270  Q
    |||| ||||||| |||||||||| ||||||||| ||| |||||| |||| |||   | ||||||||||||||||    
T  9449998 taaagggtgaatatgcgaacaaactcacaacacctaaattaatagcatacaacggcaaaatgcctacaaataat 9450071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 184
Target Start/End: Complemental strand, 10574826 - 10574789
Alignment:
Q  147 aaatgatatttattcattcaaattgatagagcacatca 184  Q
    |||||||||| |||||||||||||||||||| ||||||    
T  10574826 aaatgatattcattcattcaaattgatagagtacatca 10574789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 169
Target Start/End: Original strand, 35666997 - 35667038
Alignment:
Q  128 ttttatttttataaaaacaaaatgatatttattcattcaaat 169  Q
    |||| |||||| ||||||||||||||||| ||||||||||||    
T  35666997 ttttttttttaaaaaaacaaaatgatattcattcattcaaat 35667038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 174
Target Start/End: Complemental strand, 37849146 - 37849105
Alignment:
Q  133 tttttataaaaacaaaatgatatttattcattcaaattgata 174  Q
    |||||||||||| ||||||||||| |||||||||||| ||||    
T  37849146 tttttataaaaataaaatgatattcattcattcaaatcgata 37849105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 169
Target Start/End: Original strand, 45198798 - 45198839
Alignment:
Q  128 ttttatttttataaaaacaaaatgatatttattcattcaaat 169  Q
    |||| |||||| ||||||||||||||||| ||||||||||||    
T  45198798 ttttttttttacaaaaacaaaatgatattcattcattcaaat 45198839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 183
Target Start/End: Complemental strand, 6667852 - 6667820
Alignment:
Q  151 gatatttattcattcaaattgatagagcacatc 183  Q
    |||||| ||||||||||||||||||||||||||    
T  6667852 gatattcattcattcaaattgatagagcacatc 6667820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 184
Target Start/End: Original strand, 9977004 - 9977048
Alignment:
Q  140 aaaaacaaaatgatatttattcattcaaattgatagagcacatca 184  Q
    |||||||||| |||||| ||||||| |||||||||||| ||||||    
T  9977004 aaaaacaaaacgatattcattcatttaaattgatagagtacatca 9977048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 133 - 177
Target Start/End: Original strand, 15123664 - 15123707
Alignment:
Q  133 tttttataaaaacaaaatgatatttattcattcaaattgatagag 177  Q
    |||||||||||| ||| ||||||| ||||||||||||||||||||    
T  15123664 tttttataaaaataaa-tgatattcattcattcaaattgatagag 15123707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 209 - 249
Target Start/End: Complemental strand, 22751767 - 22751727
Alignment:
Q  209 ctgcgaacaaattcacaacacataagttaataacataaaac 249  Q
    ||||||||||||||||||||  || ||||||||||||||||    
T  22751767 ctgcgaacaaattcacaacatctatgttaataacataaaac 22751727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 147 - 183
Target Start/End: Original strand, 26017332 - 26017368
Alignment:
Q  147 aaatgatatttattcattcaaattgatagagcacatc 183  Q
    |||||||||| |||||||||||||||||||| |||||    
T  26017332 aaatgatattcattcattcaaattgatagagtacatc 26017368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 184
Target Start/End: Original strand, 28044550 - 28044594
Alignment:
Q  140 aaaaacaaaatgatatttattcattcaaattgatagagcacatca 184  Q
    |||||||||| |||||| |||||||||||| ||||||| ||||||    
T  28044550 aaaaacaaaacgatattcattcattcaaatcgatagagtacatca 28044594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 244
Target Start/End: Complemental strand, 28476457 - 28476409
Alignment:
Q  196 gtaaatggtgaatctgcgaacaaattcacaacacataagttaataacat 244  Q
    ||||||||||||||||| |||||| ||||| |||  |||||||||||||    
T  28476457 gtaaatggtgaatctgcaaacaaactcacagcactcaagttaataacat 28476409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 147 - 183
Target Start/End: Complemental strand, 32312961 - 32312925
Alignment:
Q  147 aaatgatatttattcattcaaattgatagagcacatc 183  Q
    |||||||||| |||||||||||||||||||| |||||    
T  32312961 aaatgatattcattcattcaaattgatagagtacatc 32312925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 133 - 169
Target Start/End: Complemental strand, 32684975 - 32684939
Alignment:
Q  133 tttttataaaaacaaaatgatatttattcattcaaat 169  Q
    |||||| ||||||||||||||||| ||||||||||||    
T  32684975 tttttacaaaaacaaaatgatattcattcattcaaat 32684939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 133 - 169
Target Start/End: Complemental strand, 34774018 - 34773982
Alignment:
Q  133 tttttataaaaacaaaatgatatttattcattcaaat 169  Q
    |||||| ||||||||||||||||| ||||||||||||    
T  34774018 tttttacaaaaacaaaatgatattcattcattcaaat 34773982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 147 - 183
Target Start/End: Complemental strand, 34893547 - 34893511
Alignment:
Q  147 aaatgatatttattcattcaaattgatagagcacatc 183  Q
    |||||||||| |||||||||||||||||||| |||||    
T  34893547 aaatgatattcattcattcaaattgatagagtacatc 34893511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 133 - 169
Target Start/End: Complemental strand, 42311585 - 42311549
Alignment:
Q  133 tttttataaaaacaaaatgatatttattcattcaaat 169  Q
    |||||||||||||||||||||||| ||| ||||||||    
T  42311585 tttttataaaaacaaaatgatattcatttattcaaat 42311549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 44; Significance: 5e-16; HSPs: 58)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 140 - 270
Target Start/End: Complemental strand, 53811333 - 53811203
Alignment:
Q  140 aaaaacaaaatgatatttattcattcaaattgatagagcacat-catcgttaaagatgtaaatggtgaatctgcgaacaaattcacaacacataagttaa 238  Q
    |||||||||| |||||| ||||||| |||| ||||||| |||| ||||| |||| | ||||| ||||||||||||||| || |||||||||  |||||||    
T  53811333 aaaaacaaaacgatattcattcatttaaatcgatagagtacatacatcgctaaaaacgtaaagggtgaatctgcgaac-aactcacaacacccaagttaa 53811235  T
Q  239 taacataaaacaatacaatgcctacaaataat 270  Q
    || |||| |||   | ||||||||||||||||    
T  53811234 tagcatacaacgccaaaatgcctacaaataat 53811203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 183 - 270
Target Start/End: Complemental strand, 43853705 - 43853618
Alignment:
Q  183 catcgttaaagatgtaaatggtgaatctgcgaacaaattcacaacacataagttaataacataaaacaatacaatgcctacaaataat 270  Q
    ||||| |||| ||||||||||| |||||||||||||| ||||||||   |||||||||||||| ||||| | |||||  |||||||||    
T  43853705 catcgctaaaaatgtaaatggttaatctgcgaacaaactcacaacatccaagttaataacatacaacaacaaaatgctgacaaataat 43853618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 196 - 270
Target Start/End: Original strand, 12199554 - 12199627
Alignment:
Q  196 gtaaatggtgaatctgcgaacaaattcacaacacataagttaataacataaaacaatacaatgcctacaaataat 270  Q
    |||||||||||||||||||||||| |||||||||  ||| |||||||||| |||| || ||| ||||||||||||    
T  12199554 gtaaatggtgaatctgcgaacaaactcacaacacccaag-taataacatacaacagtaaaatacctacaaataat 12199627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 133 - 269
Target Start/End: Original strand, 56156435 - 56156575
Alignment:
Q  133 tttttataaaaacaaaatgatatttattcattcaaattgataga-gcacatca---tcgttaaagatgtaaatggtgaatctgcgaacaaattcacaaca 228  Q
    |||||| |||||||||| |||||| ||||||||||||||||||| | ||||||     | |||| | ||||| |||||||||||||||||| ||||||||    
T  56156435 tttttacaaaaacaaaacgatattcattcattcaaattgatagaggtacatcagatatgctaaaaacgtaaaaggtgaatctgcgaacaaactcacaaca 56156534  T
Q  229 cataagttaataacataaaacaatacaatgcctacaaataa 269  Q
    |  | || |||| ||||||||   | |||||||||||||||    
T  56156535 cccaggtaaatagcataaaacggcaaaatgcctacaaataa 56156575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 128 - 270
Target Start/End: Complemental strand, 2521106 - 2520954
Alignment:
Q  128 ttttatttttataaaaacaaaatgatatttattcattcaaattgatagagcacatca----------tcgttaaagatgtaaatggtgaatctgcgaaca 217  Q
    |||| |||||| |||||||||| |||||| |||||||||||| |||||||  |||||          ||| |||| | ||||| ||||||||||||||||    
T  2521106 ttttttttttacaaaaacaaaacgatattcattcattcaaatcgatagagtccatcagatacaaacatcgctaaaaacgtaaagggtgaatctgcgaaca 2521007  T
Q  218 aattcacaacacataagttaataacataaaacaatacaatgcctacaaataat 270  Q
    || |||||||||  ||||||||| |||| |||   | ||||||||||||||||    
T  2521006 aactcacaacacccaagttaatagcatacaacggcaaaatgcctacaaataat 2520954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 140 - 270
Target Start/End: Original strand, 19853306 - 19853446
Alignment:
Q  140 aaaaacaaaatgatatttattcattcaaattgatagagcacatca----------tcgttaaagatgtaaatggtgaatctgcgaacaaattcacaacac 229  Q
    |||||||||| |||||| |||||||||||| ||||||| ||||||          |||||||| | ||||| |||||||||||||||||| |||||||||    
T  19853306 aaaaacaaaacgatattcattcattcaaatcgatagagtacatcagatacaaacatcgttaaaaacgtaaagggtgaatctgcgaacaaactcacaacac 19853405  T
Q  230 ataagttaataacataaaacaatacaatgcctacaaataat 270  Q
      ||||||||| |||| |||   | |||||||| |||||||    
T  19853406 ccaagttaatagcatacaacggcaaaatgcctagaaataat 19853446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 128 - 270
Target Start/End: Complemental strand, 43510523 - 43510371
Alignment:
Q  128 ttttatttttataaaaacaaaatgatatttattcattcaaattgatagagcacatca----------tcgttaaagatgtaaatggtgaatctgcgaaca 217  Q
    |||| ||||| ||||||||||| |||||| |||||||||||| |||| || ||||||          ||| |||| | ||||| ||||||||||||||||    
T  43510523 ttttttttttttaaaaacaaaacgatattcattcattcaaatcgataaagtacatcaaatacaaatatcgctaaaaacgtaaagggtgaatctgcgaaca 43510424  T
Q  218 aattcacaacacataagttaataacataaaacaatacaatgcctacaaataat 270  Q
    || ||||| |||  |||||||| ||||| ||| | | ||||||||||||||||    
T  43510423 aactcacagcacccaagttaatgacatacaacgacaaaatgcctacaaataat 43510371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 194 - 270
Target Start/End: Original strand, 17949182 - 17949258
Alignment:
Q  194 atgtaaatggtgaatctgcgaacaaattcacaacacataagttaataacataaaacaatacaatgcctacaaataat 270  Q
    ||||||| |||||||||||||||||| |||||||||  |||||||||||||| || || | ||||| |||| |||||    
T  17949182 atgtaaagggtgaatctgcgaacaaactcacaacacccaagttaataacatacaagaacaaaatgcatacatataat 17949258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 194 - 270
Target Start/End: Original strand, 17953034 - 17953110
Alignment:
Q  194 atgtaaatggtgaatctgcgaacaaattcacaacacataagttaataacataaaacaatacaatgcctacaaataat 270  Q
    ||||||| |||||||||||||||||| |||||||||  |||||||||||||| || || | ||||| |||| |||||    
T  17953034 atgtaaagggtgaatctgcgaacaaactcacaacacccaagttaataacatacaagaacaaaatgcatacatataat 17953110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 140 - 266
Target Start/End: Complemental strand, 25274195 - 25274062
Alignment:
Q  140 aaaaacaaaatgatatttattcattcaaattgatagagcacatcat-------cgttaaagatgtaaatggtgaatctgcgaacaaattcacaacacata 232  Q
    ||||||||||||||||| |||||||||||| || |||  |||||||       || |||| | ||||| | |||||||||||||||| ||||||||  ||    
T  25274195 aaaaacaaaatgatattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaactcacaacatcta 25274096  T
Q  233 agttaataacataaaacaatacaatgcctacaaa 266  Q
    |||||||| |||| ||||  | ||||||||||||    
T  25274095 agttaatagcatataacagcataatgcctacaaa 25274062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 183 - 270
Target Start/End: Complemental strand, 36161973 - 36161886
Alignment:
Q  183 catcgttaaagatgtaaatggtgaatctgcgaacaaattcacaacacataagttaataacataaaacaatacaatgcctacaaataat 270  Q
    |||||||||| | |||||  ||||||||| ||||||| |||||||||  |||||||||||||| ||| |   ||||||||||||||||    
T  36161973 catcgttaaaaacgtaaagagtgaatctgtgaacaaactcacaacacccaagttaataacatataacgaccaaatgcctacaaataat 36161886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 270
Target Start/End: Complemental strand, 9714171 - 9714085
Alignment:
Q  184 atcgttaaagatgtaaatggtgaatctgcgaacaaattcacaacacataagttaataacataaaacaatacaatgcctacaaataat 270  Q
    ||||||||| | ||||| |||||| ||||||||||| |||||||||  ||||||| |||||| ||  | | ||||||||||||||||    
T  9714171 atcgttaaaaacgtaaagggtgaacctgcgaacaaactcacaacactcaagttaacaacatacaatgacaaaatgcctacaaataat 9714085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 204 - 270
Target Start/End: Original strand, 11299878 - 11299944
Alignment:
Q  204 tgaatctgcgaacaaattcacaacacataagttaataacataaaacaatacaatgcctacaaataat 270  Q
    |||||||||||||||| |||||||||  ||||||||||||||||||   | ||||||||| ||||||    
T  11299878 tgaatctgcgaacaaactcacaacacccaagttaataacataaaacgccaaaatgcctacgaataat 11299944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 140 - 174
Target Start/End: Original strand, 35395458 - 35395492
Alignment:
Q  140 aaaaacaaaatgatatttattcattcaaattgata 174  Q
    |||||||||||||||||||||||||||||||||||    
T  35395458 aaaaacaaaatgatatttattcattcaaattgata 35395492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 205 - 270
Target Start/End: Complemental strand, 33921294 - 33921229
Alignment:
Q  205 gaatctgcgaacaaattcacaacacataagttaataacataaaacaatacaatgcctacaaataat 270  Q
    |||| |||||||||| ||||||||   ||||||||| |||| ||| ||||||||||||||||||||    
T  33921294 gaatatgcgaacaaactcacaacatccaagttaatagcatacaactatacaatgcctacaaataat 33921229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 128 - 177
Target Start/End: Complemental strand, 43095960 - 43095911
Alignment:
Q  128 ttttatttttataaaaacaaaatgatatttattcattcaaattgatagag 177  Q
    |||| |||||||||||| |||| |||||| ||||||||||||||||||||    
T  43095960 ttttttttttataaaaataaaacgatattcattcattcaaattgatagag 43095911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 140 - 176
Target Start/End: Original strand, 6155003 - 6155039
Alignment:
Q  140 aaaaacaaaatgatatttattcattcaaattgataga 176  Q
    ||||||||||||||||| |||||||||||||||||||    
T  6155003 aaaaacaaaatgatattcattcattcaaattgataga 6155039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 140 - 184
Target Start/End: Complemental strand, 13634430 - 13634386
Alignment:
Q  140 aaaaacaaaatgatatttattcattcaaattgatagagcacatca 184  Q
    ||||||||||||||||| |||||||||||| ||||||| ||||||    
T  13634430 aaaaacaaaatgatattcattcattcaaatcgatagagtacatca 13634386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 225
Target Start/End: Complemental strand, 55228228 - 55228188
Alignment:
Q  185 tcgttaaagatgtaaatggtgaatctgcgaacaaattcaca 225  Q
    |||||||| |||||||||||||||||||||||||| |||||    
T  55228228 tcgttaaaaatgtaaatggtgaatctgcgaacaaactcaca 55228188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 133 - 270
Target Start/End: Original strand, 56040433 - 56040580
Alignment:
Q  133 tttttataaaaacaaaatgatatttattcattcaaattgatagagcacat----------catcgttaaagatgtaaatggtgaatctgcgaacaaattc 222  Q
    |||||| |||||||||| |||||| |||||||||||| ||||||| ||||          ||||| |||| | ||||| ||||||||||||| |||| ||    
T  56040433 tttttacaaaaacaaaacgatattcattcattcaaatcgatagagtacatcagatacaaacatcgctaaaaacgtaaagggtgaatctgcgagcaaactc 56040532  T
Q  223 acaacacataagttaataacataaaacaatacaatgcctacaaataat 270  Q
    ||| ||   ||||||||| |||| ||| | | ||||||||||||||||    
T  56040533 acagcatccaagttaatagcatacaacgacaaaatgcctacaaataat 56040580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 183 - 270
Target Start/End: Complemental strand, 9178615 - 9178528
Alignment:
Q  183 catcgttaaagatgtaaatggtgaatctgcgaacaaattcacaacacataagttaataacataaaacaatacaatgcctacaaataat 270  Q
    |||||||||| |  |||| |||||| ||||||||||| ||||  |||| ||||||||| |||| ||| | | ||||||||||||||||    
T  9178615 catcgttaaaaacataaagggtgaaactgcgaacaaactcacgtcacacaagttaatagcatacaacgacaaaatgcctacaaataat 9178528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 133 - 219
Target Start/End: Original strand, 19896411 - 19896506
Alignment:
Q  133 tttttataaaaacaaaatgatatttattcattcaaattgatagagcacat---------catcgttaaagatgtaaatggtgaatctgcgaacaaa 219  Q
    |||||| ||||||||||||||||| ||||||| ||||| |||||  ||||         |||||||||| | ||||||||||||||||||||||||    
T  19896411 tttttacaaaaacaaaatgatattcattcatttaaattaatagaatacatcataatcaacatcgttaaaaacgtaaatggtgaatctgcgaacaaa 19896506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 133 - 184
Target Start/End: Complemental strand, 21662759 - 21662708
Alignment:
Q  133 tttttataaaaacaaaatgatatttattcattcaaattgatagagcacatca 184  Q
    |||||| |||| ||||| |||||||||||||||||| |||||||| ||||||    
T  21662759 tttttacaaaatcaaaacgatatttattcattcaaagtgatagagtacatca 21662708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 133 - 184
Target Start/End: Complemental strand, 21671523 - 21671472
Alignment:
Q  133 tttttataaaaacaaaatgatatttattcattcaaattgatagagcacatca 184  Q
    |||||| |||| ||||| |||||||||||||||||| |||||||| ||||||    
T  21671523 tttttacaaaatcaaaacgatatttattcattcaaagtgatagagtacatca 21671472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 133 - 184
Target Start/End: Complemental strand, 22611512 - 22611461
Alignment:
Q  133 tttttataaaaacaaaatgatatttattcattcaaattgatagagcacatca 184  Q
    |||||| |||||||||| |||||||||||||| |||| ||||||| ||||||    
T  22611512 tttttacaaaaacaaaacgatatttattcatttaaatcgatagagtacatca 22611461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 133 - 184
Target Start/End: Original strand, 26633458 - 26633509
Alignment:
Q  133 tttttataaaaacaaaatgatatttattcattcaaattgatagagcacatca 184  Q
    |||||| |||||||||| |||||| |||||||||||| ||||||| ||||||    
T  26633458 tttttacaaaaacaaaacgatattcattcattcaaatcgatagagtacatca 26633509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 183 - 270
Target Start/End: Complemental strand, 35348569 - 35348482
Alignment:
Q  183 catcgttaaagatgtaaatggtgaatctgcgaacaaattcacaacacataagttaataacataaaacaatacaatgcctacaaataat 270  Q
    ||||| |||| | ||||| ||||||||||| |||||| |||||||||  ||||||||| |||||||    | ||||||||||||||||    
T  35348569 catcgctaaaaacgtaaagggtgaatctgcaaacaaactcacaacacccaagttaatagcataaaatggcaaaatgcctacaaataat 35348482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 128 - 266
Target Start/End: Original strand, 46990896 - 46991041
Alignment:
Q  128 ttttatttttataaaaacaaaatgatatttattcattcaaattgatagagcacatcat-------cgttaaagatgtaaatggtgaatctgcgaacaaat 220  Q
    |||||||||  | |||| ||||||||||| |||||||||||| ||||||| |||||||       |  |||| | ||||||| ||||||||||||||||     
T  46990896 ttttattttatttaaaaaaaaatgatattcattcattcaaatcgatagagtacatcattcaacgccactaaaaacgtaaatgatgaatctgcgaacaaac 46990995  T
Q  221 tcacaacacataagttaataacataaaacaatacaatgcctacaaa 266  Q
    ||||||||   ||||||| | |||| ||| | | ||||||||||||    
T  46990996 tcacaacattcaagttaacagcatagaacgacataatgcctacaaa 46991041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 128 - 174
Target Start/End: Complemental strand, 28857727 - 28857681
Alignment:
Q  128 ttttatttttataaaaacaaaatgatatttattcattcaaattgata 174  Q
    |||| |||||| |||||||||| |||||| |||||||||||||||||    
T  28857727 ttttttttttagaaaaacaaaacgatattcattcattcaaattgata 28857681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 133 - 183
Target Start/End: Complemental strand, 43157231 - 43157181
Alignment:
Q  133 tttttataaaaacaaaatgatatttattcattcaaattgatagagcacatc 183  Q
    |||||| ||||| ||||||||||| ||| |||||||||||||||| |||||    
T  43157231 tttttaaaaaaaaaaaatgatattcatttattcaaattgatagagtacatc 43157181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 204 - 266
Target Start/End: Complemental strand, 44947653 - 44947591
Alignment:
Q  204 tgaatctgcgaacaaattcacaacacataagttaataacataaaacaatacaatgcctacaaa 266  Q
    |||||||||||||||| ||||||||   |||||||||||||| |||   ||||||||||||||    
T  44947653 tgaatctgcgaacaaactcacaacatccaagttaataacatataacggcacaatgcctacaaa 44947591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 169
Target Start/End: Original strand, 9645289 - 9645330
Alignment:
Q  128 ttttatttttataaaaacaaaatgatatttattcattcaaat 169  Q
    |||| |||||| ||||||||||| ||||||||||||||||||    
T  9645289 ttttttttttacaaaaacaaaataatatttattcattcaaat 9645330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 176
Target Start/End: Original strand, 31891073 - 31891102
Alignment:
Q  147 aaatgatatttattcattcaaattgataga 176  Q
    ||||||||||||||||||||||||||||||    
T  31891073 aaatgatatttattcattcaaattgataga 31891102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 263 - 296
Target Start/End: Complemental strand, 32766631 - 32766598
Alignment:
Q  263 caaataattgattgaatttgtaattgactgatgt 296  Q
    ||||| ||||||||||||||||||||||||||||    
T  32766631 caaatcattgattgaatttgtaattgactgatgt 32766598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 185
Target Start/End: Complemental strand, 45418821 - 45418764
Alignment:
Q  128 ttttatttttataaaaacaaaatgatatttattcattcaaattgatagagcacatcat 185  Q
    |||| |||||| |||||||||| |||||| ||||| |||||||||||||  |||||||    
T  45418821 ttttttttttacaaaaacaaaacgatattaattcactcaaattgatagaatacatcat 45418764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 169
Target Start/End: Original strand, 53616415 - 53616456
Alignment:
Q  128 ttttatttttataaaaacaaaatgatatttattcattcaaat 169  Q
    |||| |||||| ||||||||||||||||| ||||||||||||    
T  53616415 ttttttttttacaaaaacaaaatgatattcattcattcaaat 53616456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 147 - 183
Target Start/End: Complemental strand, 2945578 - 2945542
Alignment:
Q  147 aaatgatatttattcattcaaattgatagagcacatc 183  Q
    |||||||||| |||||||||||||||||||| |||||    
T  2945578 aaatgatattaattcattcaaattgatagagtacatc 2945542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 184
Target Start/End: Original strand, 4142558 - 4142602
Alignment:
Q  140 aaaaacaaaatgatatttattcattcaaattgatagagcacatca 184  Q
    |||||||||| |||||| |||||||||||| ||||||| ||||||    
T  4142558 aaaaacaaaacgatattcattcattcaaatcgatagagtacatca 4142602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 267
Target Start/End: Complemental strand, 6153440 - 6153380
Alignment:
Q  207 atctgcgaacaaattcacaacacataagttaataacataaaacaatacaatgcctacaaat 267  Q
    ||||||||||||| | ||||||   |||| ||||| ||||||||||| |||||||||||||    
T  6153440 atctgcgaacaaacttacaacattcaagtgaataatataaaacaatataatgcctacaaat 6153380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 183
Target Start/End: Complemental strand, 8712965 - 8712933
Alignment:
Q  151 gatatttattcattcaaattgatagagcacatc 183  Q
    ||||||||||||||||||||||||||| |||||    
T  8712965 gatatttattcattcaaattgatagagtacatc 8712933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 176
Target Start/End: Complemental strand, 9048989 - 9048953
Alignment:
Q  140 aaaaacaaaatgatatttattcattcaaattgataga 176  Q
    |||||||||| |||||| |||||||||||||||||||    
T  9048989 aaaaacaaaacgatattcattcattcaaattgataga 9048953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 194 - 262
Target Start/End: Original strand, 9145749 - 9145817
Alignment:
Q  194 atgtaaatggtgaatctgcgaacaaattcacaacacataagttaataacataaaacaatacaatgccta 262  Q
    ||||||| ||||||||||||||| || ||||||||| ||| |||||| |||| || | || ||||||||    
T  9145749 atgtaaaaggtgaatctgcgaacgaactcacaacacctaaattaatagcatacaaaagtaaaatgccta 9145817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 184
Target Start/End: Original strand, 10258695 - 10258739
Alignment:
Q  140 aaaaacaaaatgatatttattcattcaaattgatagagcacatca 184  Q
    ||||||||| ||| ||| |||||||||||||||||||| ||||||    
T  10258695 aaaaacaaagtgagattcattcattcaaattgatagagtacatca 10258739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 184
Target Start/End: Complemental strand, 12493647 - 12493603
Alignment:
Q  140 aaaaacaaaatgatatttattcattcaaattgatagagcacatca 184  Q
    ||||| ||||||||||| ||||||| |||||||||||| ||||||    
T  12493647 aaaaataaaatgatattcattcattaaaattgatagagtacatca 12493603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 270
Target Start/End: Complemental strand, 18936025 - 18935957
Alignment:
Q  202 ggtgaatctgcgaacaaattcacaacacataagttaataacataaaacaatacaatgcctacaaataat 270  Q
    ||||||||||| |||||| |||||||||  ||||||||||| || || |  | ||||||||||||||||    
T  18936025 ggtgaatctgcaaacaaactcacaacacccaagttaataacgtacaatagcaaaatgcctacaaataat 18935957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 184
Target Start/End: Original strand, 21686036 - 21686080
Alignment:
Q  140 aaaaacaaaatgatatttattcattcaaattgatagagcacatca 184  Q
    |||||||||| |||||| |||||||||||| ||||||| ||||||    
T  21686036 aaaaacaaaacgatattcattcattcaaatcgatagagtacatca 21686080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 147 - 183
Target Start/End: Complemental strand, 24100594 - 24100558
Alignment:
Q  147 aaatgatatttattcattcaaattgatagagcacatc 183  Q
    |||||||||| |||||||||||||||||||| |||||    
T  24100594 aaatgatattcattcattcaaattgatagagtacatc 24100558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 183
Target Start/End: Complemental strand, 27091165 - 27091133
Alignment:
Q  151 gatatttattcattcaaattgatagagcacatc 183  Q
    ||||||||||||||||||||||||||| |||||    
T  27091165 gatatttattcattcaaattgatagagtacatc 27091133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 133 - 177
Target Start/End: Original strand, 27360027 - 27360071
Alignment:
Q  133 tttttataaaaacaaaatgatatttattcattcaaattgatagag 177  Q
    |||||| ||||| ||||||||||| |||| |||||||||||||||    
T  27360027 tttttacaaaaataaaatgatattcattctttcaaattgatagag 27360071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 270
Target Start/End: Original strand, 31891153 - 31891221
Alignment:
Q  202 ggtgaatctgcgaacaaattcacaacacataagttaataacataaaacaatacaatgcctacaaataat 270  Q
    ||||||| |||||||||| |||||||||  ||||||||| |||| |||   | ||||||||||||||||    
T  31891153 ggtgaatttgcgaacaaactcacaacacccaagttaatagcatacaacggcaaaatgcctacaaataat 31891221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 270
Target Start/End: Complemental strand, 32766757 - 32766689
Alignment:
Q  202 ggtgaatctgcgaacaaattcacaacacataagttaataacataaaacaatacaatgcctacaaataat 270  Q
    |||||||||| ||||||| ||||| |||  ||||||||| |||| ||| | | ||||||||||||||||    
T  32766757 ggtgaatctgagaacaaactcacagcacccaagttaatagcatacaacgacataatgcctacaaataat 32766689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 145 - 185
Target Start/End: Original strand, 32952540 - 32952580
Alignment:
Q  145 caaaatgatatttattcattcaaattgatagagcacatcat 185  Q
    |||||||||||| |||||||||||| ||||||| |||||||    
T  32952540 caaaatgatattcattcattcaaatcgatagagtacatcat 32952580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 176
Target Start/End: Complemental strand, 36162037 - 36162001
Alignment:
Q  140 aaaaacaaaatgatatttattcattcaaattgataga 176  Q
    ||||| ||||||||||| |||||||||||||||||||    
T  36162037 aaaaataaaatgatattcattcattcaaattgataga 36162001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 270
Target Start/End: Complemental strand, 36194951 - 36194883
Alignment:
Q  202 ggtgaatctgcgaacaaattcacaacacataagttaataacataaaacaatacaatgcctacaaataat 270  Q
    |||||||||||||||||| ||||||||   ||||||||| |||| |||   | ||||||||||||||||    
T  36194951 ggtgaatctgcgaacaaactcacaacatccaagttaatagcatacaacggcaaaatgcctacaaataat 36194883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 147 - 183
Target Start/End: Original strand, 38169832 - 38169868
Alignment:
Q  147 aaatgatatttattcattcaaattgatagagcacatc 183  Q
    |||||||||| ||||||||||||||||| ||||||||    
T  38169832 aaatgatattaattcattcaaattgatatagcacatc 38169868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 147 - 183
Target Start/End: Original strand, 38943817 - 38943853
Alignment:
Q  147 aaatgatatttattcattcaaattgatagagcacatc 183  Q
    |||||||||| |||||||||||||||||||| |||||    
T  38943817 aaatgatattcattcattcaaattgatagagtacatc 38943853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 147 - 183
Target Start/End: Original strand, 44374949 - 44374985
Alignment:
Q  147 aaatgatatttattcattcaaattgatagagcacatc 183  Q
    |||||||||| |||||||||||||||||||| |||||    
T  44374949 aaatgatattcattcattcaaattgatagagtacatc 44374985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 147 - 183
Target Start/End: Original strand, 56236491 - 56236527
Alignment:
Q  147 aaatgatatttattcattcaaattgatagagcacatc 183  Q
    |||||||||| |||||||||||||||||||| |||||    
T  56236491 aaatgatattcattcattcaaattgatagagtacatc 56236527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0884 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0884
Description:

Target: scaffold0884; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 183 - 270
Target Start/End: Original strand, 1820 - 1907
Alignment:
Q  183 catcgttaaagatgtaaatggtgaatctgcgaacaaattcacaacacataagttaataacataaaacaatacaatgcctacaaataat 270  Q
    ||||| |||| | ||||| |||||||||||||||||| ||| |||||  |||||||||||||| ||||  | ||||||||||||||||    
T  1820 catcgctaaaaacgtaaagggtgaatctgcgaacaaactcataacacccaagttaataacatacaacagcaaaatgcctacaaataat 1907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 183 - 270
Target Start/End: Original strand, 65889 - 65976
Alignment:
Q  183 catcgttaaagatgtaaatggtgaatctgcgaacaaattcacaacacataagttaataacataaaacaatacaatgcctacaaataat 270  Q
    ||||| |||| ||||||| |||||||||||||||||| ||| |||||  ||||||||| |||| ||| | | ||||||||||||||||    
T  65889 catcggtaaaaatgtaaagggtgaatctgcgaacaaactcataacactcaagttaatagcatacaacgacaaaatgcctacaaataat 65976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 56)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 128 - 270
Target Start/End: Complemental strand, 24583455 - 24583304
Alignment:
Q  128 ttttatttttataaaaacaaaatgatatttattcattcaaattgatagagcacatc---------atcgttaaagatgtaaatggtgaatctgcgaacaa 218  Q
    |||| |||| ||||||||||||||||||| |||||||||||| ||||||  |||||         |||| |||| ||||||| | |||||||||||||||    
T  24583455 tttttttttgataaaaacaaaatgatattcattcattcaaatcgatagaatacatcagaatcaagatcgctaaaaatgtaaaggatgaatctgcgaacaa 24583356  T
Q  219 attcacaacacataagttaataacataaaacaatacaatgcctacaaataat 270  Q
    | ||||| |||  ||||||||| |||| |||   | ||||||||||||||||    
T  24583355 actcacatcacccaagttaatagcatacaacggcaaaatgcctacaaataat 24583304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 183 - 248
Target Start/End: Original strand, 13144659 - 13144724
Alignment:
Q  183 catcgttaaagatgtaaatggtgaatctgcgaacaaattcacaacacataagttaataacataaaa 248  Q
    |||||||||| ||||||| |||||||||||||||||| ||||||||   ||||||||| |||||||    
T  13144659 catcgttaaaaatgtaaagggtgaatctgcgaacaaactcacaacatccaagttaatagcataaaa 13144724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 129 - 177
Target Start/End: Original strand, 10776244 - 10776292
Alignment:
Q  129 tttatttttataaaaacaaaatgatatttattcattcaaattgatagag 177  Q
    |||||||||| |||||||||||||||||  |||||||||||||||||||    
T  10776244 tttatttttacaaaaacaaaatgatattcgttcattcaaattgatagag 10776292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 202 - 270
Target Start/End: Original strand, 34412958 - 34413026
Alignment:
Q  202 ggtgaatctgcgaacaaattcacaacacataagttaataacataaaacaatacaatgcctacaaataat 270  Q
    |||||||||||||||||| |||||||||  |||||||||||||| |||   | ||||||||||||||||    
T  34412958 ggtgaatctgcgaacaaactcacaacacccaagttaataacatacaaccgcaaaatgcctacaaataat 34413026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 183 - 270
Target Start/End: Original strand, 34878125 - 34878212
Alignment:
Q  183 catcgttaaagatgtaaatggtgaatctgcgaacaaattcacaacacataagttaataacataaaacaatacaatgcctacaaataat 270  Q
    ||||| |||| | ||||| |||||||||| ||||||| |||||||||  ||||||||| ||||||||   | ||||||||||||||||    
T  34878125 catcgctaaaaacgtaaaaggtgaatctgtgaacaaactcacaacacccaagttaatagcataaaacggcaaaatgcctacaaataat 34878212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 140 - 268
Target Start/End: Original strand, 49504389 - 49504527
Alignment:
Q  140 aaaaacaaaatgatatttattcattcaaattgatagagcacat----------catcgttaaagatgtaaatggtgaatctgcgaacaaattcacaacac 229  Q
    |||||||||| |||||| |||||||||||| ||||||| ||||          |||||||||| | ||||| |||||||||||||||||| ||||| |||    
T  49504389 aaaaacaaaacgatattcattcattcaaatcgatagagtacataagatacaaacatcgttaaaaacgtaaagggtgaatctgcgaacaaactcacagcac 49504488  T
Q  230 ataagttaataacataaaacaatacaatgcctacaaata 268  Q
      ||||||||| |||| |||  || |||||||| |||||    
T  49504489 ccaagttaatagcatacaacggtaaaatgcctaaaaata 49504527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 135 - 270
Target Start/End: Original strand, 11462271 - 11462416
Alignment:
Q  135 tttataaaaacaaaatgatatttattcattcaaattgatagagcacatca----------tcgttaaagatgtaaatggtgaatctgcgaacaaattcac 224  Q
    |||| |||||||||| |||||| |||||||||||| ||||||| ||||||          ||| |||| | ||||||||||||||| |||||||| ||||    
T  11462271 tttacaaaaacaaaacgatattcattcattcaaatcgatagagtacatcagatacaaacatcgctaaaaacgtaaatggtgaatctacgaacaaactcac 11462370  T
Q  225 aacacataagttaataacataaaacaatacaatgcctacaaataat 270  Q
    | |||  ||||||||| |||| ||| | | ||| ||||||||||||    
T  11462371 agcacccaagttaatagcatacaacgacaaaattcctacaaataat 11462416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 196 - 270
Target Start/End: Complemental strand, 21687610 - 21687536
Alignment:
Q  196 gtaaatggtgaatctgcgaacaaattcacaacacataagttaataacataaaacaatacaatgcctacaaataat 270  Q
    ||||| ||||||||||| |||||| |||||||||  || |||||| |||||||| | | ||||||||||||||||    
T  21687610 gtaaaaggtgaatctgctaacaaactcacaacacccaaattaatagcataaaacgagaaaatgcctacaaataat 21687536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 270
Target Start/End: Original strand, 21947466 - 21947552
Alignment:
Q  184 atcgttaaagatgtaaatggtgaatctgcgaacaaattcacaacacataagttaataacataaaacaatacaatgcctacaaataat 270  Q
    ||||||||| ||||||| ||| |||||||||||||| ||||| |||  |||||||||| ||| |||   | ||||||||||||||||    
T  21947466 atcgttaaaaatgtaaagggtaaatctgcgaacaaactcacatcacccaagttaataaaatacaacggcaaaatgcctacaaataat 21947552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 140 - 185
Target Start/End: Original strand, 41081481 - 41081526
Alignment:
Q  140 aaaaacaaaatgatatttattcattcaaattgatagagcacatcat 185  Q
    ||||||||||||||||| |||||||||||| ||||||| |||||||    
T  41081481 aaaaacaaaatgatattcattcattcaaatcgatagagtacatcat 41081526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 133 - 270
Target Start/End: Complemental strand, 4413419 - 4413272
Alignment:
Q  133 tttttataaaaacaaaatgatatttattcattcaaattgatagagcacat----------catcgttaaagatgtaaatggtgaatctgcgaacaaattc 222  Q
    |||||| |||||||||| ||||||||||| ||||||| ||||||| ||||          ||||| |||| | ||||| | |||||||| ||||||||||    
T  4413419 tttttacaaaaacaaaacgatatttattcgttcaaatcgatagagtacatcagatacaaacatcgctaaaaacgtaaaggatgaatctgtgaacaaattc 4413320  T
Q  223 acaacacataagttaataacataaaacaatacaatgcctacaaataat 270  Q
    ||| |||  || |||||| |||| ||||  | ||||||||||||||||    
T  4413319 acagcactcaatttaatagcatacaacagcaaaatgcctacaaataat 4413272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 128 - 184
Target Start/End: Complemental strand, 14872949 - 14872893
Alignment:
Q  128 ttttatttttataaaaacaaaatgatatttattcattcaaattgatagagcacatca 184  Q
    |||| |||||| ||||||||||||||||| ||||||| |||| ||||||| ||||||    
T  14872949 ttttttttttacaaaaacaaaatgatattcattcatttaaatcgatagagtacatca 14872893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 140 - 176
Target Start/End: Complemental strand, 15836316 - 15836280
Alignment:
Q  140 aaaaacaaaatgatatttattcattcaaattgataga 176  Q
    |||| ||||||||||||||||||||||||||||||||    
T  15836316 aaaagcaaaatgatatttattcattcaaattgataga 15836280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 240
Target Start/End: Complemental strand, 16162060 - 16162016
Alignment:
Q  196 gtaaatggtgaatctgcgaacaaattcacaacacataagttaata 240  Q
    ||||| |||||||||||||||||| ||||||||| ||||||||||    
T  16162060 gtaaagggtgaatctgcgaacaaactcacaacacctaagttaata 16162016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 140 - 184
Target Start/End: Complemental strand, 26535634 - 26535590
Alignment:
Q  140 aaaaacaaaatgatatttattcattcaaattgatagagcacatca 184  Q
    |||||||||| |||||| |||||||||||||||||||| ||||||    
T  26535634 aaaaacaaaacgatattcattcattcaaattgatagagtacatca 26535590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 140 - 184
Target Start/End: Complemental strand, 27456787 - 27456743
Alignment:
Q  140 aaaaacaaaatgatatttattcattcaaattgatagagcacatca 184  Q
    |||||||||| |||||| |||||||||||||||||||| ||||||    
T  27456787 aaaaacaaaacgatattcattcattcaaattgatagagtacatca 27456743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 140 - 184
Target Start/End: Complemental strand, 44915937 - 44915893
Alignment:
Q  140 aaaaacaaaatgatatttattcattcaaattgatagagcacatca 184  Q
    ||||| ||||||||||| |||||||||||||||||||| ||||||    
T  44915937 aaaaataaaatgatattcattcattcaaattgatagagtacatca 44915893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 183 - 270
Target Start/End: Original strand, 7337510 - 7337597
Alignment:
Q  183 catcgttaaagatgtaaatggtgaatctgcgaacaaattcacaacacataagttaataacataaaacaatacaatgcctacaaataat 270  Q
    ||||| |||| || |||| |||||||||||||||||| ||||||||   ||||||||| |||  ||||  | ||||||||||||||||    
T  7337510 catcgctaaaaatataaagggtgaatctgcgaacaaactcacaacagccaagttaatagcatgcaacagcaaaatgcctacaaataat 7337597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 197 - 248
Target Start/End: Original strand, 27579989 - 27580040
Alignment:
Q  197 taaatggtgaatctgcgaacaaattcacaacacataagttaataacataaaa 248  Q
    |||| |||||||||||||||||| |||||||||  ||||||||| |||||||    
T  27579989 taaagggtgaatctgcgaacaaactcacaacacccaagttaatagcataaaa 27580040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 183 - 270
Target Start/End: Complemental strand, 31317981 - 31317894
Alignment:
Q  183 catcgttaaagatgtaaatggtgaatctgcgaacaaattcacaacacataagttaataacataaaacaatacaatgcctacaaataat 270  Q
    |||||||||| | ||||| ||||||| |||||||||| ||||| |||  |||||||||  ||  ||| ||| ||||||||||||||||    
T  31317981 catcgttaaaaacgtaaagggtgaatttgcgaacaaactcacatcacccaagttaataggatgcaacgataaaatgcctacaaataat 31317894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 128 - 183
Target Start/End: Original strand, 33486677 - 33486732
Alignment:
Q  128 ttttatttttataaaaacaaaatgatatttattcattcaaattgatagagcacatc 183  Q
    |||| |||||| ||||| |||| |||||| |||||||||||||||||||| |||||    
T  33486677 ttttttttttacaaaaaaaaaacgatattcattcattcaaattgatagagtacatc 33486732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 183 - 270
Target Start/End: Original strand, 35484238 - 35484325
Alignment:
Q  183 catcgttaaagatgtaaatggtgaatctgcgaacaaattcacaacacataagttaataacataaaacaatacaatgcctacaaataat 270  Q
    ||||| |||| ||||||| || ||||||||||||||| |||||||||  ||||||||| |||| |||   | ||||| ||||||||||    
T  35484238 catcgctaaaaatgtaaagggcgaatctgcgaacaaactcacaacacccaagttaatagcatacaacggcaaaatgcttacaaataat 35484325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 140 - 266
Target Start/End: Complemental strand, 48217741 - 48217608
Alignment:
Q  140 aaaaacaaaatgatatttattcattcaaattgatagagcacatcatc-------gttaaagatgtaaatggtgaatctgcgaacaaattcacaacacata 232  Q
    ||||||||||||||||| |||||||||||| || |||  |||||||        | |||| ||||||| | ||||| |||||||||| ||||||||   |    
T  48217741 aaaaacaaaatgatattcattcattcaaatcgagagattacatcatttaacactgctaaaaatgtaaaggatgaatttgcgaacaaactcacaacatcca 48217642  T
Q  233 agttaataacataaaacaatacaatgcctacaaa 266  Q
    |||||||| |||| ||||| | ||||||||||||    
T  48217641 agttaatagcatataacaacataatgcctacaaa 48217608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 204 - 270
Target Start/End: Original strand, 7836664 - 7836730
Alignment:
Q  204 tgaatctgcgaacaaattcacaacacataagttaataacataaaacaatacaatgcctacaaataat 270  Q
    |||||||||||||||| ||||| |||  ||||||||| ||||||||   | ||||||||||||||||    
T  7836664 tgaatctgcgaacaaactcacagcacccaagttaatagcataaaacggcaaaatgcctacaaataat 7836730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 196 - 270
Target Start/End: Complemental strand, 16989603 - 16989529
Alignment:
Q  196 gtaaatggtgaatctgcgaacaaattcacaacacataagttaataacataaaacaatacaatgcctacaaataat 270  Q
    ||||||||| ||||||| |||||| ||||| |||  ||||||||| ||||||||   | ||||||||||||||||    
T  16989603 gtaaatggtaaatctgcaaacaaactcacagcacccaagttaatagcataaaacggcaaaatgcctacaaataat 16989529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 138 - 176
Target Start/End: Complemental strand, 24583249 - 24583211
Alignment:
Q  138 ataaaaacaaaatgatatttattcattcaaattgataga 176  Q
    ||||||||||||||||||| |||||||||||| ||||||    
T  24583249 ataaaaacaaaatgatattcattcattcaaatcgataga 24583211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 187 - 245
Target Start/End: Complemental strand, 27872987 - 27872929
Alignment:
Q  187 gttaaagatgtaaatggtgaatctgcgaacaaattcacaacacataagttaataacata 245  Q
    |||||| | ||||||| |||||||||||||||| ||||||||   ||||||||||||||    
T  27872987 gttaaaaacgtaaatgatgaatctgcgaacaaactcacaacattcaagttaataacata 27872929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 204 - 270
Target Start/End: Complemental strand, 34529298 - 34529232
Alignment:
Q  204 tgaatctgcgaacaaattcacaacacataagttaataacataaaacaatacaatgcctacaaataat 270  Q
    |||||||||||||||| ||||| |||  |||||||||  ||| ||||| | ||||||||||||||||    
T  34529298 tgaatctgcgaacaaactcacatcacccaagttaatagtatacaacaaaaaaatgcctacaaataat 34529232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 204 - 270
Target Start/End: Complemental strand, 44543496 - 44543430
Alignment:
Q  204 tgaatctgcgaacaaattcacaacacataagttaataacataaaacaatacaatgcctacaaataat 270  Q
    |||||||||||||||| ||||| |||  ||||||||| ||||||||   | ||||||||||||||||    
T  44543496 tgaatctgcgaacaaactcacagcacccaagttaatagcataaaacggcaaaatgcctacaaataat 44543430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 170
Target Start/End: Complemental strand, 1602397 - 1602368
Alignment:
Q  141 aaaacaaaatgatatttattcattcaaatt 170  Q
    ||||||||||||||||||||||||||||||    
T  1602397 aaaacaaaatgatatttattcattcaaatt 1602368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 197 - 270
Target Start/End: Complemental strand, 5984067 - 5983994
Alignment:
Q  197 taaatggtgaatctgcgaacaaattcacaacacataagttaataacataaaacaatacaatgcctacaaataat 270  Q
    |||| ||||||| |||||||||| ||||| |||  ||||||||| |||| ||| | | ||||||||||||||||    
T  5984067 taaagggtgaatatgcgaacaaactcacatcacccaagttaatagcatacaacgacaaaatgcctacaaataat 5983994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 245
Target Start/End: Complemental strand, 11454260 - 11454129
Alignment:
Q  121 attatacttttatttttataaaaacaaaatgatatttattcattcaaattgatagagcacatcat-------cgttaaagatgtaaatggtgaatctgcg 213  Q
    |||||| |||| |||| | ||||| |||||||||||||||||||||||| || |||  |||||||       || |||| | ||||| | ||||||||||    
T  11454260 attataatttttttttgacaaaaataaaatgatatttattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcg 11454161  T
Q  214 aacaaattcacaacacataagttaataacata 245  Q
    |||||| ||||||||   ||||||||| ||||    
T  11454160 aacaaactcacaacatccaagttaatagcata 11454129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 249
Target Start/End: Complemental strand, 16263105 - 16263040
Alignment:
Q  184 atcgttaaagatgtaaatggtgaatctgcgaacaaattcacaacacataagttaataacataaaac 249  Q
    ||||||||| | || |||||||||||||| |||||| |||||||||  | ||||||| ||||||||    
T  16263105 atcgttaaacacgtcaatggtgaatctgctaacaaactcacaacactcatgttaatagcataaaac 16263040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 169
Target Start/End: Original strand, 18569076 - 18569117
Alignment:
Q  128 ttttatttttataaaaacaaaatgatatttattcattcaaat 169  Q
    |||| |||||| ||||||||||||||||| ||||||||||||    
T  18569076 ttttttttttaaaaaaacaaaatgatattcattcattcaaat 18569117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 293
Target Start/End: Original strand, 28053709 - 28053738
Alignment:
Q  264 aaataattgattgaatttgtaattgactga 293  Q
    ||||||||||||||||||||||||||||||    
T  28053709 aaataattgattgaatttgtaattgactga 28053738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 184
Target Start/End: Complemental strand, 38647024 - 38646987
Alignment:
Q  147 aaatgatatttattcattcaaattgatagagcacatca 184  Q
    |||||||||| |||||||||||||||||||| ||||||    
T  38647024 aaatgatattcattcattcaaattgatagagtacatca 38646987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 263 - 296
Target Start/End: Complemental strand, 44915739 - 44915706
Alignment:
Q  263 caaataattgattgaatttgtaattgactgatgt 296  Q
    ||||| ||||||||||||||||||||||||||||    
T  44915739 caaatcattgattgaatttgtaattgactgatgt 44915706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 225
Target Start/End: Original strand, 45805599 - 45805698
Alignment:
Q  133 tttttataaaaacaaaatgatatttattcattcaaattgatagagcacatcat-------cgttaaagatgtaaatggtgaatctgcgaacaaattcaca 225  Q
    |||||||||||| ||||||||||| |||||||||||| || |||  |||||||       ||||||| | ||||| | |||||||||||||||| |||||    
T  45805599 tttttataaaaataaaatgatattcattcattcaaatcgagagattacatcattcaacaccgttaaaaacgtaaaggatgaatctgcgaacaaactcaca 45805698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 137 - 185
Target Start/End: Original strand, 799626 - 799674
Alignment:
Q  137 tataaaaacaaaatgatatttattcattcaaattgatagagcacatcat 185  Q
    ||||||||||||| |||||||||| ||| ||||||||| || |||||||    
T  799626 tataaaaacaaaacgatatttattgatttaaattgataaagtacatcat 799674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 189 - 269
Target Start/End: Complemental strand, 5601004 - 5600924
Alignment:
Q  189 taaagatgtaaatggtgaatctgcgaacaaattcacaacacataagttaataacataaaacaatacaatgcctacaaataa 269  Q
    |||| ||||||||  |||||||||||||||| |||||| |   || | ||||||||| ||| ||| |||||||||||||||    
T  5601004 taaaaatgtaaataatgaatctgcgaacaaactcacaatatccaaataaataacatacaacgataaaatgcctacaaataa 5600924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 125 - 169
Target Start/End: Complemental strand, 7343041 - 7342997
Alignment:
Q  125 tacttttatttttataaaaacaaaatgatatttattcattcaaat 169  Q
    ||||||| |||||| ||||| ||||||||||| ||||||||||||    
T  7343041 tacttttttttttacaaaaataaaatgatattcattcattcaaat 7342997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 147 - 183
Target Start/End: Complemental strand, 8893732 - 8893696
Alignment:
Q  147 aaatgatatttattcattcaaattgatagagcacatc 183  Q
    |||||||||| |||||||||||||||||||| |||||    
T  8893732 aaatgatattcattcattcaaattgatagagtacatc 8893696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 147 - 183
Target Start/End: Original strand, 12967407 - 12967443
Alignment:
Q  147 aaatgatatttattcattcaaattgatagagcacatc 183  Q
    |||||||||| |||||||||||||||||||| |||||    
T  12967407 aaatgatattcattcattcaaattgatagagtacatc 12967443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 147 - 183
Target Start/End: Complemental strand, 23257528 - 23257492
Alignment:
Q  147 aaatgatatttattcattcaaattgatagagcacatc 183  Q
    |||||||||||||||||| |||||||||||| |||||    
T  23257528 aaatgatatttattcatttaaattgatagagtacatc 23257492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 147 - 183
Target Start/End: Complemental strand, 26771546 - 26771510
Alignment:
Q  147 aaatgatatttattcattcaaattgatagagcacatc 183  Q
    |||||||||| |||||||||||||||||||| |||||    
T  26771546 aaatgatattcattcattcaaattgatagagtacatc 26771510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 183
Target Start/End: Complemental strand, 28666515 - 28666483
Alignment:
Q  151 gatatttattcattcaaattgatagagcacatc 183  Q
    ||||||||||||||||||||||||||| |||||    
T  28666515 gatatttattcattcaaattgatagagtacatc 28666483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 133 - 169
Target Start/End: Original strand, 31130363 - 31130399
Alignment:
Q  133 tttttataaaaacaaaatgatatttattcattcaaat 169  Q
    |||||||||||||||| ||||||| ||||||||||||    
T  31130363 tttttataaaaacaaactgatattcattcattcaaat 31130399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 133 - 169
Target Start/End: Original strand, 32676905 - 32676941
Alignment:
Q  133 tttttataaaaacaaaatgatatttattcattcaaat 169  Q
    |||||| ||||| ||||||||||||||||||||||||    
T  32676905 tttttacaaaaataaaatgatatttattcattcaaat 32676941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 147 - 183
Target Start/End: Original strand, 34659315 - 34659351
Alignment:
Q  147 aaatgatatttattcattcaaattgatagagcacatc 183  Q
    |||||||||| |||||||||||||||||||| |||||    
T  34659315 aaatgatattcattcattcaaattgatagagtacatc 34659351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 133 - 169
Target Start/End: Original strand, 35584393 - 35584429
Alignment:
Q  133 tttttataaaaacaaaatgatatttattcattcaaat 169  Q
    |||||| ||||||||||||||||| ||||||||||||    
T  35584393 tttttacaaaaacaaaatgatattcattcattcaaat 35584429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 270
Target Start/End: Original strand, 36775576 - 36775644
Alignment:
Q  202 ggtgaatctgcgaacaaattcacaacacataagttaataacataaaacaatacaatgcctacaaataat 270  Q
    |||||||||||||||||| ||||||||   ||||||||| |||| |||   | ||||||||||||||||    
T  36775576 ggtgaatctgcgaacaaactcacaacatccaagttaatagcatacaacggcaaaatgcctacaaataat 36775644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 184
Target Start/End: Original strand, 36894202 - 36894246
Alignment:
Q  140 aaaaacaaaatgatatttattcattcaaattgatagagcacatca 184  Q
    |||||||||| |||||| |||||||||||| ||||||| ||||||    
T  36894202 aaaaacaaaacgatattcattcattcaaatcgatagagtacatca 36894246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 147 - 183
Target Start/End: Complemental strand, 46589588 - 46589552
Alignment:
Q  147 aaatgatatttattcattcaaattgatagagcacatc 183  Q
    |||||||||| |||||||||||||||||||| |||||    
T  46589588 aaatgatattcattcattcaaattgatagagtacatc 46589552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 176
Target Start/End: Complemental strand, 47133200 - 47133164
Alignment:
Q  140 aaaaacaaaatgatatttattcattcaaattgataga 176  Q
    |||||||||| |||||| |||||||||||||||||||    
T  47133200 aaaaacaaaacgatattcattcattcaaattgataga 47133164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 270
Target Start/End: Complemental strand, 48750411 - 48750343
Alignment:
Q  202 ggtgaatctgcgaacaaattcacaacacataagttaataacataaaacaatacaatgcctacaaataat 270  Q
    ||||||| |||||||||| |||||||||  ||||||||| |||| |||   | ||||||||||||||||    
T  48750411 ggtgaatatgcgaacaaactcacaacacccaagttaatagcatacaacggcaaaatgcctacaaataat 48750343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 147 - 183
Target Start/End: Complemental strand, 49652275 - 49652239
Alignment:
Q  147 aaatgatatttattcattcaaattgatagagcacatc 183  Q
    |||||||||| |||||||||||||||||||| |||||    
T  49652275 aaatgatattcattcattcaaattgatagagtacatc 49652239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 128 - 185
Target Start/End: Original strand, 201138 - 201195
Alignment:
Q  128 ttttatttttataaaaacaaaatgatatttattcattcaaattgatagagcacatcat 185  Q
    |||| |||||| ||||||||||||||||| |||||||||||| ||||||  |||||||    
T  201138 ttttttttttacaaaaacaaaatgatattcattcattcaaatcgatagattacatcat 201195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0445 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 183 - 270
Target Start/End: Complemental strand, 1586 - 1499
Alignment:
Q  183 catcgttaaagatgtaaatggtgaatctgcgaacaaattcacaacacataagttaataacataaaacaatacaatgcctacaaataat 270  Q
    ||||| |||| | ||||| ||||||||||| |||||| ||||||||   ||||||||| ||||||||   | ||||||||||||||||    
T  1586 catcgctaaaaacgtaaagggtgaatctgcaaacaaactcacaacatccaagttaatagcataaaacggcaaaatgcctacaaataat 1499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 183 - 270
Target Start/End: Original strand, 9889 - 9976
Alignment:
Q  183 catcgttaaagatgtaaatggtgaatctgcgaacaaattcacaacacataagttaataacataaaacaatacaatgcctacaaataat 270  Q
    ||||| |||| | ||||| |||||||||||||||||| ||||| |||  |||| |||| ||||||||   | ||||||||||||||||    
T  9889 catcgctaaaaacgtaaagggtgaatctgcgaacaaactcacagcacccaagtcaatagcataaaacggaaaaatgcctacaaataat 9976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 133 - 245
Target Start/End: Original strand, 83207 - 83325
Alignment:
Q  133 tttttataaaaacaaaatgatatttattcattcaaattgatagagcacatc------atcgttaaagatgtaaatggtgaatctgcgaacaaattcacaa 226  Q
    |||||| ||||||||||||||||| ||||||||||||  | |||  |||||      |||| |||| | ||||||| |||||||||||||||| ||||||    
T  83207 tttttacaaaaacaaaatgatattcattcattcaaatcaagagattacatcattcaaatcgctaaaaacgtaaatgatgaatctgcgaacaaactcacaa 83306  T
Q  227 cacataagttaataacata 245  Q
    ||   ||||||||| ||||    
T  83307 catccaagttaatagcata 83325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 128 - 170
Target Start/End: Complemental strand, 25588 - 25546
Alignment:
Q  128 ttttatttttataaaaacaaaatgatatttattcattcaaatt 170  Q
    |||| |||| |||||||||||| ||||||||||||||||||||    
T  25588 tttttttttgataaaaacaaaacgatatttattcattcaaatt 25546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 270
Target Start/End: Complemental strand, 51013 - 50931
Alignment:
Q  188 ttaaagatgtaaatggtgaatctgcgaacaaattcacaacacataagttaataacataaaacaatacaatgcctacaaataat 270  Q
    ||||| ||||||| |||||||||||||||||| ||||| |||  ||||||||| |||| ||    | ||||||||||||||||    
T  51013 ttaaaaatgtaaagggtgaatctgcgaacaaactcacagcacccaagttaatagcatacaatggcaaaatgcctacaaataat 50931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 177
Target Start/End: Original strand, 71082 - 71131
Alignment:
Q  128 ttttatttttataaaaacaaaatgatatttattcattcaaattgatagag 177  Q
    |||| |||||| ||||| ||||||||||| |||||||||| |||||||||    
T  71082 ttttttttttacaaaaataaaatgatattcattcattcaatttgatagag 71131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 185
Target Start/End: Original strand, 53195 - 53240
Alignment:
Q  140 aaaaacaaaatgatatttattcattcaaattgatagagcacatcat 185  Q
    |||||||||| |||||| ||||||||||||||||| || |||||||    
T  53195 aaaaacaaaacgatattcattcattcaaattgatatagtacatcat 53240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0888 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0888
Description:

Target: scaffold0888; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 270
Target Start/End: Original strand, 1544 - 1612
Alignment:
Q  202 ggtgaatctgcgaacaaattcacaacacataagttaataacataaaacaatacaatgcctacaaataat 270  Q
    |||||||||||||||||| ||||| ||   || |||||| |||| ||| ||| ||||||||||||||||    
T  1544 ggtgaatctgcgaacaaactcacatcatcaaaattaatagcatataacgataaaatgcctacaaataat 1612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0603 (Bit Score: 29; Significance: 0.0000004; HSPs: 2)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 270
Target Start/End: Complemental strand, 7938 - 7870
Alignment:
Q  202 ggtgaatctgcgaacaaattcacaacacataagttaataacataaaacaatacaatgcctacaaataat 270  Q
    ||||||| |||||||||| |||||||||  |||||||||||||| || |  | ||| ||||||||||||    
T  7938 ggtgaatatgcgaacaaactcacaacacccaagttaataacatacaatagcaaaatccctacaaataat 7870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0603; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 184
Target Start/End: Complemental strand, 8022 - 7978
Alignment:
Q  140 aaaaacaaaatgatatttattcattcaaattgatagagcacatca 184  Q
    ||||| |||| |||||| |||||||||||||||||||| ||||||    
T  8022 aaaaaaaaaacgatattcattcattcaaattgatagagtacatca 7978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 133 - 185
Target Start/End: Original strand, 14659 - 14710
Alignment:
Q  133 tttttataaaaacaaaatgatatttattcattcaaattgatagagcacatcat 185  Q
    |||||| ||||||||||||| ||| ||||||||||||||||| || |||||||    
T  14659 tttttacaaaaacaaaatga-attcattcattcaaattgataaagtacatcat 14710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 184
Target Start/End: Original strand, 26830 - 26874
Alignment:
Q  140 aaaaacaaaatgatatttattcattcaaattgatagagcacatca 184  Q
    ||||| ||||||||||| ||||||| |||||||||||| ||||||    
T  26830 aaaaataaaatgatattcattcattaaaattgatagagtacatca 26874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 172
Target Start/End: Original strand, 16097 - 16129
Alignment:
Q  140 aaaaacaaaatgatatttattcattcaaattga 172  Q
    ||||||||||||||||| |||||||||||||||    
T  16097 aaaaacaaaatgatattcattcattcaaattga 16129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 128 - 184
Target Start/End: Original strand, 31056 - 31112
Alignment:
Q  128 ttttatttttataaaaacaaaatgatatttattcattcaaattgatagagcacatca 184  Q
    |||| |||||| ||||| |||| |||||| ||||||||||||||||| || ||||||    
T  31056 ttttttttttacaaaaataaaacgatattcattcattcaaattgatatagtacatca 31112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University