View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8443_low_2 (Length: 691)

Name: NF8443_low_2
Description: NF8443
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8443_low_2
NF8443_low_2
[»] chr1 (36 HSPs)
chr1 (4-680)||(23378009-23378683)
chr1 (5-176)||(23591698-23591867)
chr1 (5-176)||(1502729-1502897)
chr1 (5-176)||(38812740-38812909)
chr1 (286-357)||(23377478-23377549)
chr1 (5-176)||(13321876-13322045)
chr1 (5-176)||(30171879-30172048)
chr1 (5-176)||(30187420-30187589)
chr1 (5-176)||(23576423-23576591)
chr1 (7-176)||(6754474-6754640)
chr1 (21-169)||(36490795-36490941)
chr1 (7-176)||(41624832-41624998)
chr1 (5-176)||(6180186-6180355)
chr1 (5-176)||(39150336-39150504)
chr1 (5-153)||(39627603-39627749)
chr1 (5-176)||(35512725-35512894)
chr1 (16-160)||(47355403-47355544)
chr1 (5-171)||(7824872-7825036)
chr1 (5-176)||(22167335-22167504)
chr1 (16-160)||(7520022-7520164)
chr1 (59-176)||(52337821-52337935)
chr1 (5-176)||(17919454-17919622)
chr1 (200-266)||(18577996-18578062)
chr1 (6-94)||(5857990-5858079)
chr1 (2-75)||(29924356-29924429)
chr1 (125-176)||(25465276-25465327)
chr1 (5-117)||(34050351-34050461)
chr1 (5-71)||(44918025-44918091)
chr1 (5-116)||(3121119-3121227)
chr1 (6-71)||(8062206-8062271)
chr1 (67-122)||(33048175-33048227)
chr1 (37-94)||(35941110-35941167)
chr1 (13-90)||(43317498-43317575)
chr1 (17-114)||(50079870-50079966)
chr1 (5-70)||(51382372-51382437)
chr1 (21-122)||(25956665-25956764)
[»] chr4 (41 HSPs)
chr4 (5-168)||(2096871-2097032)
chr4 (5-176)||(24684836-24685006)
chr4 (5-176)||(9759151-9759319)
chr4 (5-174)||(19468194-19468361)
chr4 (7-174)||(19450911-19451076)
chr4 (5-176)||(16667393-16667562)
chr4 (5-169)||(50352303-50352464)
chr4 (5-176)||(17409824-17409993)
chr4 (7-176)||(49181074-49181241)
chr4 (5-113)||(7349689-7349794)
chr4 (19-89)||(10813587-10813658)
chr4 (5-174)||(40049559-40049725)
chr4 (5-168)||(8736828-8736988)
chr4 (5-176)||(23545476-23545645)
chr4 (5-176)||(27019260-27019429)
chr4 (5-176)||(34941278-34941447)
chr4 (42-168)||(37784877-37785001)
chr4 (5-114)||(6875501-6875608)
chr4 (5-121)||(25843291-25843406)
chr4 (20-176)||(27362406-27362560)
chr4 (5-168)||(52391298-52391459)
chr4 (5-176)||(54495646-54495815)
chr4 (5-70)||(10389380-10389445)
chr4 (6-120)||(33632267-33632379)
chr4 (16-73)||(40681960-40682017)
chr4 (5-70)||(49228357-49228422)
chr4 (61-167)||(1378075-1378178)
chr4 (6-120)||(19838756-19838866)
chr4 (18-168)||(39876844-39876991)
chr4 (5-68)||(45742368-45742431)
chr4 (61-169)||(55813920-55814026)
chr4 (29-120)||(13009820-13009909)
chr4 (5-176)||(47326901-47327070)
chr4 (5-176)||(47341697-47341866)
chr4 (5-94)||(49332333-49332423)
chr4 (5-82)||(10658544-10658621)
chr4 (5-82)||(10872689-10872766)
chr4 (6-168)||(51691343-51691502)
chr4 (5-72)||(3728249-3728317)
chr4 (100-176)||(18882276-18882352)
chr4 (58-115)||(35645071-35645126)
[»] chr7 (26 HSPs)
chr7 (5-115)||(42750289-42750396)
chr7 (6-176)||(47457470-47457638)
chr7 (186-266)||(19017845-19017925)
chr7 (4-176)||(26300572-26300740)
chr7 (5-176)||(24462964-24463132)
chr7 (5-176)||(33342989-33343157)
chr7 (7-176)||(7170005-7170171)
chr7 (12-176)||(25709408-25709570)
chr7 (5-176)||(46290011-46290179)
chr7 (5-176)||(4969773-4969942)
chr7 (5-176)||(19889341-19889509)
chr7 (5-114)||(19868114-19868221)
chr7 (5-176)||(34270266-34270430)
chr7 (5-176)||(9331962-9332130)
chr7 (5-176)||(23982764-23982933)
chr7 (98-176)||(33072072-33072150)
chr7 (6-176)||(36548469-36548636)
chr7 (5-158)||(47707911-47708065)
chr7 (32-122)||(3530177-3530264)
chr7 (32-176)||(8091321-8091463)
chr7 (130-176)||(26050470-26050516)
chr7 (130-176)||(26059829-26059875)
chr7 (98-176)||(29398143-29398221)
chr7 (5-70)||(24250314-24250379)
chr7 (5-70)||(29398227-29398292)
chr7 (15-94)||(12650831-12650911)
[»] chr8 (45 HSPs)
chr8 (5-176)||(26682068-26682237)
chr8 (5-176)||(6818017-6818186)
chr8 (5-176)||(31812113-31812282)
chr8 (5-176)||(3306064-3306232)
chr8 (5-176)||(20514632-20514802)
chr8 (5-176)||(2161388-2161556)
chr8 (5-70)||(7750668-7750733)
chr8 (5-169)||(12131983-12132145)
chr8 (5-176)||(9580118-9580287)
chr8 (5-112)||(14816198-14816303)
chr8 (5-112)||(14829437-14829542)
chr8 (5-120)||(38843704-38843817)
chr8 (5-70)||(11923015-11923080)
chr8 (5-70)||(38527821-38527886)
chr8 (41-176)||(39024866-39024998)
chr8 (5-176)||(12189597-12189766)
chr8 (5-176)||(12434025-12434194)
chr8 (34-120)||(34741730-34741813)
chr8 (5-91)||(8284660-8284747)
chr8 (5-169)||(45005970-45006131)
chr8 (13-90)||(5298077-5298157)
chr8 (5-176)||(13327950-13328118)
chr8 (5-112)||(35678347-35678452)
chr8 (5-176)||(36967079-36967248)
chr8 (5-70)||(7140571-7140636)
chr8 (5-70)||(9824959-9825024)
chr8 (25-119)||(16445801-16445893)
chr8 (5-70)||(40210933-40210998)
chr8 (6-66)||(11947016-11947076)
chr8 (5-113)||(9743862-9743967)
chr8 (12-120)||(10974619-10974725)
chr8 (7-176)||(28014867-28015032)
chr8 (98-176)||(2083078-2083156)
chr8 (5-51)||(11117129-11117175)
chr8 (5-176)||(26834561-26834730)
chr8 (5-116)||(32186186-32186295)
chr8 (3-53)||(37523756-37523806)
chr8 (5-47)||(38213081-38213123)
chr8 (32-90)||(44091346-44091404)
chr8 (5-70)||(10129104-10129169)
chr8 (5-70)||(12346006-12346071)
chr8 (32-89)||(45516316-45516373)
chr8 (13-173)||(1844572-1844731)
chr8 (7-90)||(35583368-35583453)
chr8 (6-70)||(40568314-40568378)
[»] chr2 (32 HSPs)
chr2 (5-175)||(15411632-15411800)
chr2 (5-176)||(9747317-9747486)
chr2 (5-169)||(5583574-5583735)
chr2 (5-176)||(14377425-14377593)
chr2 (5-90)||(12438740-12438825)
chr2 (14-176)||(45062207-45062367)
chr2 (5-176)||(23932565-23932734)
chr2 (5-176)||(27665053-27665221)
chr2 (5-168)||(43806360-43806521)
chr2 (42-176)||(24729586-24729718)
chr2 (5-169)||(34213965-34214129)
chr2 (5-113)||(34817544-34817649)
chr2 (5-94)||(39367059-39367149)
chr2 (5-176)||(7757795-7757963)
chr2 (5-70)||(12016667-12016732)
chr2 (58-160)||(2579983-2580082)
chr2 (6-70)||(7720116-7720180)
chr2 (100-176)||(26003355-26003431)
chr2 (30-114)||(2051639-2051721)
chr2 (5-91)||(43388857-43388944)
chr2 (5-176)||(19228426-19228594)
chr2 (5-120)||(36612796-36612909)
chr2 (5-120)||(36620647-36620760)
chr2 (5-55)||(36909503-36909553)
chr2 (5-71)||(39904159-39904225)
chr2 (5-70)||(4579901-4579966)
chr2 (5-62)||(16754971-16755028)
chr2 (5-70)||(16919266-16919331)
chr2 (5-70)||(22705455-22705520)
chr2 (5-62)||(26003612-26003669)
chr2 (13-96)||(25998088-25998172)
chr2 (5-175)||(26229864-26230030)
[»] chr6 (18 HSPs)
chr6 (5-176)||(6016856-6017025)
chr6 (5-158)||(30623326-30623477)
chr6 (5-168)||(8977483-8977644)
chr6 (5-176)||(34692354-34692523)
chr6 (5-176)||(14228135-14228303)
chr6 (5-176)||(28943778-28943946)
chr6 (22-112)||(29730295-29730383)
chr6 (7-176)||(10887031-10887198)
chr6 (5-174)||(33017725-33017891)
chr6 (5-160)||(1017803-1017956)
chr6 (5-176)||(29863311-29863480)
chr6 (5-70)||(1814894-1814959)
chr6 (5-70)||(3485711-3485776)
chr6 (5-176)||(17552596-17552764)
chr6 (5-70)||(24979262-24979327)
chr6 (7-62)||(17596315-17596370)
chr6 (5-176)||(18332697-18332866)
chr6 (5-70)||(5363005-5363070)
[»] chr5 (26 HSPs)
chr5 (5-176)||(30839782-30839950)
chr5 (5-176)||(36597580-36597748)
chr5 (7-176)||(8103589-8103755)
chr5 (5-169)||(18841721-18841883)
chr5 (5-176)||(3398220-3398389)
chr5 (5-176)||(40512952-40513120)
chr5 (5-112)||(5958196-5958301)
chr5 (5-176)||(11636732-11636900)
chr5 (67-176)||(15240959-15241065)
chr5 (13-94)||(10665053-10665134)
chr5 (5-62)||(11360186-11360243)
chr5 (201-242)||(20058109-20058150)
chr5 (5-49)||(11250090-11250134)
chr5 (16-113)||(28629890-28629984)
chr5 (5-49)||(33072677-33072721)
chr5 (5-176)||(2795524-2795692)
chr5 (17-71)||(11375972-11376026)
chr5 (98-160)||(15820317-15820379)
chr5 (84-174)||(23995427-23995516)
chr5 (99-169)||(31567507-31567577)
chr5 (5-71)||(34578012-34578078)
chr5 (32-115)||(40309497-40309580)
chr5 (5-70)||(24014800-24014865)
chr5 (58-176)||(6863610-6863725)
chr5 (100-176)||(7162934-7163010)
chr5 (193-225)||(24015674-24015706)
[»] chr3 (31 HSPs)
chr3 (5-176)||(2571269-2571437)
chr3 (5-176)||(10307767-10307935)
chr3 (5-174)||(54527717-54527884)
chr3 (5-176)||(38389447-38389616)
chr3 (5-176)||(50204403-50204572)
chr3 (4-113)||(20938056-20938162)
chr3 (7-176)||(46492352-46492519)
chr3 (5-176)||(51618050-51618216)
chr3 (22-115)||(53794781-53794872)
chr3 (14-92)||(2379162-2379238)
chr3 (37-166)||(38786343-38786468)
chr3 (5-176)||(11610915-11611083)
chr3 (12-95)||(24569324-24569408)
chr3 (7-90)||(37444149-37444232)
chr3 (4-91)||(40330381-40330468)
chr3 (5-168)||(13495294-13495455)
chr3 (5-168)||(42180052-42180213)
chr3 (5-93)||(37055455-37055544)
chr3 (5-94)||(47386922-47387013)
chr3 (98-174)||(51401531-51401607)
chr3 (5-56)||(8497550-8497601)
chr3 (12-176)||(45983516-45983675)
chr3 (5-91)||(46845531-46845618)
chr3 (16-90)||(13879899-13879973)
chr3 (130-176)||(25633121-25633167)
chr3 (4-70)||(26200733-26200799)
chr3 (5-168)||(12515491-12515651)
chr3 (99-176)||(23523038-23523115)
chr3 (5-89)||(30214103-30214187)
chr3 (5-70)||(32321835-32321899)
chr3 (98-175)||(49396471-49396548)
[»] scaffold0111 (1 HSPs)
scaffold0111 (5-176)||(37123-37292)
[»] scaffold0631 (1 HSPs)
scaffold0631 (6-49)||(443-486)
[»] scaffold0129 (1 HSPs)
scaffold0129 (12-120)||(13723-13829)
[»] scaffold0618 (1 HSPs)
scaffold0618 (32-90)||(8506-8564)
[»] scaffold0061 (1 HSPs)
scaffold0061 (5-176)||(52788-52956)
[»] scaffold0036 (1 HSPs)
scaffold0036 (6-117)||(94086-94195)
[»] scaffold0017 (1 HSPs)
scaffold0017 (5-176)||(145678-145846)
[»] scaffold0011 (1 HSPs)
scaffold0011 (5-176)||(13086-13254)
[»] scaffold0305 (1 HSPs)
scaffold0305 (67-169)||(18012-18111)
[»] scaffold0149 (1 HSPs)
scaffold0149 (5-49)||(22460-22504)


Alignment Details
Target: chr1 (Bit Score: 582; Significance: 0; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 582; E-Value: 0
Query Start/End: Original strand, 4 - 680
Target Start/End: Complemental strand, 23378683 - 23378009
Alignment:
Q  4 tgtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatatt 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  23378683 tgtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacaattatttgttaaaaagttacactatatt 23378584  T
Q  104 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatgagtctaggctttataccaacaataaaac 203  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  23378583 taatataaaatgtacaaatagcaattcaaatttactattttgaaattcttaacatgttcaaatttgtacatgagtctaggctt-ataccaacaataaaac 23378485  T
Q  204 atcatcaaataaaattatctaatgaacatgaacaaaacaagagcctatatatacacacaactttatcctaatcgatcagagcgcgtccatgaaattcatc 303  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  23378484 atcatcaaataaaattatctaatgaacatgaacaaaacaagagcctatatatacacacaactttatcctaatcgatcggagcgcgtccatgaaattcatc 23378385  T
Q  304 cgtaaaatggattgcgttaaaactgtagcgatttatatggaggtttctaaaatcgattgattataacgtatgacctaccacatgtgtcagtatattgatt 403  Q
     |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23378384 -gtaaaatggactgcgttaaaactgtagcgatttatatggaggtttctaaaatcgattgattataacgtatgacctaccacatgtgtcagtatattgatt 23378286  T
Q  404 gtctccgtactccagacctacactataaccccatttggtcacttgaatttagggttttaaggtgatttaagagtgaggactgaaaaaatgtgcatgagga 503  Q
    || | ||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||    
T  23378285 gtgttcgtactccagacctacactataagcccatttggtcacttgaatttagggttttgaggtgatttaagagcgaggactgaaaaaatgtgcatgagga 23378186  T
Q  504 tttggtgactcttatgggtgaacataattggattgtgagat-gtttatgttcattgagaagtcaatcaatgtgcttaatgtcttgctactcttggttata 602  Q
    |||||||||||||||||||||||||||||||||||||||||     || |||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  23378185 tttggtgactcttatgggtgaacataattggattgtgagatcaaacatattcattgagaagtcaatcaatgtgcttaatgtcttgttactcttggttata 23378086  T
Q  603 atgaaagacttgattcgacaaaactctcatccccaaccttctttattttttattacttcataatgattgtagaatgat 680  Q
    |||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  23378085 atgacagacttgattcgacaaaactctcatccccaaccttcttta-tttttattacttcataatgattgtagaatgat 23378009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 5 - 176
Target Start/End: Original strand, 23591698 - 23591867
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaat-aacagttatttgttaaaaagttacactatatt 103  Q
    |||||| |||||||||||| ||| || |||||||| |||||||||||| ||| |||||||||||||| || | |||||| |||||||||||   ||||||    
T  23591698 gtttgtctaacatgtgcaacattgcacatgttaaagcaactaaaattagtaagtttttattgaaaatcaataattatttattaaaaagtta---tatatt 23591794  T
Q  104 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 176  Q
    ||||| ||||||||||| |  |||| |||| ||   ||||  || |||||||||||| |||||||| ||||||    
T  23591795 taatacaaaatgtacaagttccaatgcaaagttgttatttaaaatttcttaacatgtgcaaatttgcacatga 23591867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 5 - 176
Target Start/End: Complemental strand, 1502897 - 1502729
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatattt 104  Q
    |||||| |||||||||||||||| || |||||||   |||||||| ||  || ||||||||||||| |||| ||||||   |||||||||   |||||||    
T  1502897 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagcaaatttttattgaaaacaacaattatttaacaaaaagtta---tatattt 1502801  T
Q  105 aatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 176  Q
    |||| ||||||| |||||  |||| |||| |||| ||||| || |||||||||||| |||||||| ||||||    
T  1502800 aatacaaaatgttcaaattccaatgcaaagttactattttaaatttcttaacatgtgcaaatttgcacatga 1502729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 5 - 176
Target Start/End: Original strand, 38812740 - 38812909
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttatt-gaaaataacagttatttgttaaaaagttacactatatt 103  Q
    ||||||||||||||||||| |||  | |||||||||||||||| | || ||||||||| || ||||| |||| |||||| || |||||||    ||||||    
T  38812740 gtttgtttaacatgtgcaacattgtacatgttaaaacaactaatagtagtaactttttcttagaaaacaacaattatttattcaaaagtt---ttatatt 38812836  T
Q  104 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 176  Q
    |||||| |||||||||| |  ||||  ||| || | |||||||| |||||||||||| |||||||| ||||||    
T  38812837 taatattaaatgtacaagtttcaatataaaatttctattttgaacttcttaacatgtgcaaatttgcacatga 38812909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 286 - 357
Target Start/End: Complemental strand, 23377549 - 23377478
Alignment:
Q  286 gcgtccatgaaattcatccgtaaaatggattgcgttaaaactgtagcgatttatatggaggtttctaaaatc 357  Q
    |||||||||||||||||| ||||||||||||||||||||| || || |||| ||| ||||||||||||||||    
T  23377549 gcgtccatgaaattcatctgtaaaatggattgcgttaaaattgcagtgattgataaggaggtttctaaaatc 23377478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 5 - 176
Target Start/End: Original strand, 13321876 - 13322045
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaat-aacagttatttgttaaaaagttacactatatt 103  Q
    |||||| |||||||||||| |||  | |||||||||||||||| | || ||||||||| |||||||  |||| |||||| || |||||||    ||||||    
T  13321876 gtttgtctaacatgtgcaacattgtacatgttaaaacaactaatagtagtaactttttcttgaaaaacaacaattattttttcaaaagttt---tatatt 13321972  T
Q  104 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 176  Q
    |||||| ||||||||||||  |||| |||| || | ||||| || |||||||||| | |||||||| ||||||    
T  13321973 taatattaaatgtacaaattccaatacaaaatttctattttaaacttcttaacatatgcaaatttgcacatga 13322045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 5 - 176
Target Start/End: Original strand, 30171879 - 30172048
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattg-aaaataacagttatttgttaaaaagttacactatatt 103  Q
    |||||| |||||||||||| ||| || ||||||| ||| |||||| || ||| ||||||||| |||| || | |||||| |||||||| |||   |||||    
T  30171879 gtttgtctaacatgtgcaacattgcacatgttaagacatctaaaagtagtaattttttattgaaaaacaaaacttatttattaaaaagctac---atatt 30171975  T
Q  104 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 176  Q
    |||||| ||||| |||| |  ||| ||||| |||||| ||| || |||||||||||| |||||||| ||||||    
T  30171976 taatatgaaatgcacaagttccaagtcaaagttaccactttaaacttcttaacatgtgcaaatttgcacatga 30172048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 5 - 176
Target Start/End: Original strand, 30187420 - 30187589
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattg-aaaataacagttatttgttaaaaagttacactatatt 103  Q
    |||||| |||||||||||| ||| || ||||||| ||| |||||| || ||| ||||||||| |||| || | |||||| |||||||| |||   |||||    
T  30187420 gtttgtctaacatgtgcaacattgcacatgttaagacatctaaaagtagtaattttttattgaaaaacaaaacttatttattaaaaagctac---atatt 30187516  T
Q  104 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 176  Q
    |||||| ||||| |||| |  ||| ||||| |||||| ||| || |||||||||||| |||||||| ||||||    
T  30187517 taatatgaaatgcacaagttccaagtcaaagttaccactttaaacttcttaacatgtgcaaatttgcacatga 30187589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 5 - 176
Target Start/End: Complemental strand, 23576591 - 23576423
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatattt 104  Q
    |||||| |||||| ||||||||| || |||||||   |||||||| ||| || ||||||||||||  |||| ||||||   |||||||||   |||||||    
T  23576591 gtttgtctaacatctgcaatattgcacatgttaaggtaactaaaagtaacaagtttttattgaaaccaacaattatttaacaaaaagtta---tatattt 23576495  T
Q  105 aatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 176  Q
    |||| ||||||| ||| |  |||| |||| |||| ||||| || |||||||||||| |||||||| ||||||    
T  23576494 aatacaaaatgttcaagtttcaatgcaaagttactattttaaatttcttaacatgtgcaaatttgcacatga 23576423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 7 - 176
Target Start/End: Original strand, 6754474 - 6754640
Alignment:
Q  7 ttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatatttaa 106  Q
    |||| |||||||||||||||| || |||||||  ||||||||| || ||||||||||||||||  |||| ||| || |||||||  |||   ||| ||||    
T  6754474 ttgtctaacatgtgcaatattgcacatgttaaggcaactaaaaatagtaactttttattgaaaccaacaattaattattaaaaatctac---ataattaa 6754570  T
Q  107 tataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 176  Q
    ||||||||| |||| |  ||| ||||| |||| | ||| || |||||| ||||| |||||||| ||||||    
T  6754571 tataaaatgcacaagttccaagtcaaagttactactttaaacttcttatcatgtgcaaatttgcacatga 6754640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 21 - 169
Target Start/End: Original strand, 36490795 - 36490941
Alignment:
Q  21 caatattacatatgttaaaacaactaaaattaataactttttattgaaaat-aacagttatttgttaaaaagttacactatatttaatataaaatgtaca 119  Q
    ||||||| || |||||||| ||| ||||| || ||| |||||||||||||  |||| |||||| |||||||||||   |||||| |||| ||||||||||    
T  36490795 caatattgcacatgttaaagcaattaaaagtagtaagtttttattgaaaaacaacaattatttattaaaaagtta---tatattaaatacaaaatgtaca 36490891  T
Q  120 aatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttg 169  Q
    | |  |||| |||| |||| ||||| || |||||||||||| ||||||||    
T  36490892 agttccaatgcaaagttactattttaaacttcttaacatgtgcaaatttg 36490941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 7 - 176
Target Start/End: Original strand, 41624832 - 41624998
Alignment:
Q  7 ttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatatttaa 106  Q
    |||| |||||||||||||||| || |||||||| ||||||||| || ||||||||||||||||  |||| ||| || |||||||  |||   ||| ||||    
T  41624832 ttgtctaacatgtgcaatattgcacatgttaaagcaactaaaaatagtaactttttattgaaaccaacaattaattattaaaaatctac---ataattaa 41624928  T
Q  107 tataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 176  Q
    ||||||||| |||| |  ||| ||||| |||| | ||| || |||||| ||| | |||||||| ||||||    
T  41624929 tataaaatgcacaagttccaagtcaaagttactactttaaacttcttatcatatgcaaatttgcacatga 41624998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 5 - 176
Target Start/End: Original strand, 6180186 - 6180355
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttatt-gaaaataacagttatttgttaaaaagttacactatatt 103  Q
    |||||| |||||||||||| ||| || |||||||||||||||| | || ||||||||| || |||||| | | |||||| || |||||||    ||||||    
T  6180186 gtttgtctaacatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaattataattatttatttaaaagtt---ttatatt 6180282  T
Q  104 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 176  Q
    |||||| |||||||||| |  ||||  ||| || | ||||| || |||||||||||| |||||||| ||||||    
T  6180283 taatattaaatgtacaagttccaatataaaatttctattttaaacttcttaacatgtgcaaatttgcacatga 6180355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 5 - 176
Target Start/End: Complemental strand, 39150504 - 39150336
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa-taacagttatttgttaaaaagttacactatatt 103  Q
    |||||| |||||||||||||||| || |||||||  ||||||||| || |||||||| ||||||||  |||| |||||| || |||||||||   |||||    
T  39150504 gtttgtctaacatgtgcaatattgcacatgttaaggcaactaaaagtagtaacttttcattgaaaaccaacaattatttatt-aaaagttac---atatt 39150409  T
Q  104 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 176  Q
    ||||||||||   ||||||  ||| ||||| |||| | ||| || |||||| ||||| |||||||| ||||||    
T  39150408 taatataaaaaacacaaattccaagtcaaagttactactttaaacttcttatcatgtgcaaatttgcacatga 39150336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 5 - 153
Target Start/End: Complemental strand, 39627749 - 39627603
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaat-aacagttatttgttaaaaagttacactatatt 103  Q
    |||||| ||||||||||||||||||| |||||||   |||||||| ||  ||||||| ||||||||  |||| | | || || ||||||||||   ||||    
T  39627749 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaaaatagcaacttttaattgaaaaacaacaatcacttattgaaaagttaca---tatt 39627653  T
Q  104 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattctt 153  Q
    |||||||||||| |||| |  |||| ||||||||| |||||||| |||||    
T  39627652 taatataaaatgcacaagttacaatacaaatttactattttgaacttctt 39627603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 176
Target Start/End: Original strand, 35512725 - 35512894
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttatt-gaaaataacagttatttgttaaaaagttacactatatt 103  Q
    |||||| |||||||||||| ||| || |||||||||||||||| | || ||||||||| || ||||| |||| |||| | || |||||||    ||||||    
T  35512725 gtttgtctaacatgtgcaacattgcaaatgttaaaacaactaatagtagtaactttttcttggaaaacaacatttatatattcaaaagtt---ttatatt 35512821  T
Q  104 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 176  Q
    |||||| |||||| ||| |  ||||  ||| || | ||||| || |||||||||||| |||||||| ||||||    
T  35512822 taatattaaatgtgcaagttccaatataaaatttctattttaaacttcttaacatgtgcaaatttgcacatga 35512894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 160
Target Start/End: Complemental strand, 47355544 - 47355403
Alignment:
Q  16 atgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatatttaatataaaatg 115  Q
    |||||||||||| || |||||||| ||||||||| ||  |||||||||||||||| |||| ||| || | |||||| ||   |||  |||||||||||||    
T  47355544 atgtgcaatattgcacatgttaaagcaactaaaagtataaactttttattgaaaacaacaattacttatcaaaaaggta---tatcattaatataaaatg 47355448  T
Q  116 tacaaatagcaattcaaatttaccattttgaaattcttaacatgt 160  Q
     |||| |  |||| ||||||||  ||||| || ||||||||||||    
T  47355447 aacaagttccaatacaaatttattattttaaatttcttaacatgt 47355403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 5 - 171
Target Start/End: Complemental strand, 7825036 - 7824872
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttatt-gaaaataacagttatttgttaaaaagttacactatatt 103  Q
    |||||| |||||||||||| ||| || |||||||||||||||| | || ||||||||| || |||||  ||| |||||| || |||||||    ||||||    
T  7825036 gtttgtctaacatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaaccacaattatttattcaaaagtt---ttatatt 7824940  T
Q  104 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgta 171  Q
    |||||| ||||||||||||  || | |||| ||   ||||| || || ||||||||| ||||||||||    
T  7824939 taatattaaatgtacaaatttcattacaaaatttttattttaaactttttaacatgtgcaaatttgta 7824872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 176
Target Start/End: Original strand, 22167335 - 22167504
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattg-aaaataacagttatttgtt-aaaaagttacactatat 102  Q
    |||||| || ||||||||| ||| || |||||||||||||||| | || ||||||||| ||| |||| |||| |||||| || ||||| ||    |||||    
T  22167335 gtttgtctaccatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttgaaaaacaacaattatttattcaaaaaatt----tatat 22167430  T
Q  103 ttaatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 176  Q
    ||||||| |||||||||| |  |||| |||| || | ||||| || |||||| ||||| |||||||| ||||||    
T  22167431 ttaatattaaatgtacaagttccaatacaaagtttctattttaaacttcttatcatgtgcaaatttgcacatga 22167504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 16 - 160
Target Start/End: Complemental strand, 7520164 - 7520022
Alignment:
Q  16 atgtgcaatattacatatgttaaaacaactaaaattaataactttttatt-gaaaataacagttatttgttaaaaagttacactatatttaatataaaat 114  Q
    |||||||||||| || |||||||| ||||||||| || ||| ||||||||  ||||||| | |||||| |||||| ||||   |||||| |||| |||||    
T  7520164 atgtgcaatattgcacatgttaaagcaactaaaagtagtaaatttttattaaaaaataatacttatttattaaaatgtta---tatattaaatacaaaat 7520068  T
Q  115 gtacaaatagcaattcaaatttaccattttgaaattcttaacatgt 160  Q
    ||||||||  |||| |||| ||   ||||| || ||||||||||||    
T  7520067 gtacaaatttcaatgcaaagttgttattttaaacttcttaacatgt 7520022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 59 - 176
Target Start/End: Original strand, 52337821 - 52337935
Alignment:
Q  59 ttttattgaaaataacagttatttgttaaaaagttacactatatttaatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacat 158  Q
    ||||||| | ||||||| |||||| ||||||| |||   |||||||||||||||||  | || | ||||| || |||||| ||||| || ||||||||||    
T  52337821 ttttattaataataacaattatttattaaaaattta---tatatttaatataaaatacataagttgcaatgcatatttactattttaaacttcttaacat 52337917  T
Q  159 gttcaaatttgtacatga 176  Q
    ||||||| |||| |||||    
T  52337918 gttcaaacttgttcatga 52337935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 176
Target Start/End: Original strand, 17919454 - 17919622
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa-taacagttatttgttaaaaagttacactatatt 103  Q
    |||||| ||||||||||||||||  | |||||||  ||||||||| || |||||||| ||||||||  |||| |||||| || |||||||||   |||||    
T  17919454 gtttgtctaacatgtgcaatattgtacatgttaaggcaactaaaagtagtaacttttcattgaaaaccaacaattatttatt-aaaagttac---atatt 17919549  T
Q  104 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 176  Q
    ||||||||||   ||||||  ||| ||||| |||| | ||| || ||||||  |||| |||||||| ||||||    
T  17919550 taatataaaaaacacaaattccaagtcaaagttactactttaaacttcttattatgtgcaaatttgcacatga 17919622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 200 - 266
Target Start/End: Original strand, 18577996 - 18578062
Alignment:
Q  200 aaacatcatcaaataaaattatctaatgaacatgaacaaaacaagagcctatatatacacacaactt 266  Q
    |||||||||||||||||| |||||||||  ||| | |||||||| | ||||||| ||||||||||||    
T  18577996 aaacatcatcaaataaaactatctaatgtgcatcatcaaaacaaaatcctatatctacacacaactt 18578062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 94
Target Start/End: Original strand, 5857990 - 5858079
Alignment:
Q  6 tttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataa-cagttatttgttaaaaagtta 94  Q
    ||||||||||||||||||||||  | || ||||||||| ||||| ||| ||||||||||| |||| ||  | |||||| |||||||||||    
T  5857990 tttgtttaacatgtgcaatatttgacatattaaaacaattaaaagtaacaactttttattaaaaacaagtaattatttattaaaaagtta 5858079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 75
Target Start/End: Complemental strand, 29924429 - 29924356
Alignment:
Q  2 tttgtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataaca 75  Q
    ||||||||| |||||| |||||  ||||| ||| |||| ||||||||| ||| || ||||||||||||||||||    
T  29924429 tttgtttgtctaacatatgcaacgttacacatgctaaagcaactaaaaataacaattttttattgaaaataaca 29924356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 176
Target Start/End: Original strand, 25465276 - 25465327
Alignment:
Q  125 caattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 176  Q
    |||| ||||||||| |||||||| |||||||||||| |||||||| ||||||    
T  25465276 caatgcaaatttactattttgaacttcttaacatgtgcaaatttgcacatga 25465327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 117
Target Start/End: Complemental strand, 34050461 - 34050351
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattg-aaaataacagttatttgttaaaaagttacactatatt 103  Q
    |||||| |||||||||||||||| || |||||||| |||| |||| ||| || || |||||| |||| |||| |||||| | ||||| |||   ||||||    
T  34050461 gtttgtctaacatgtgcaatattgcacatgttaaagcaaccaaaagtaacaaattattattgaaaaacaacaattatttatcaaaaaatta---tatatt 34050365  T
Q  104 taatataaaatgta 117  Q
     |||||||||||||    
T  34050364 aaatataaaatgta 34050351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 44918025 - 44918091
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaat 71  Q
    |||||| |||||||||||||||| || |||||||   |||||||| || ||| ||||||||||||||    
T  44918025 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaaatttttattgaaaat 44918091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 116
Target Start/End: Original strand, 3121119 - 3121227
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatattt 104  Q
    |||||| ||| |||||||||||||||||||||||   || ||||| ||  || ||||||||||||  |||| ||||||   |||||||||   |||||||    
T  3121119 gtttgtctaatatgtgcaatattacatatgttaaggtaattaaaagtagcaagtttttattgaaaccaacaattatttaacaaaaagtta---tatattt 3121215  T
Q  105 aatataaaatgt 116  Q
    |||| |||||||    
T  3121216 aatacaaaatgt 3121227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 71
Target Start/End: Original strand, 8062206 - 8062271
Alignment:
Q  6 tttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaat 71  Q
    ||||||||||||||||||||||  | |||||||   |||||||| || |||||||| |||||||||    
T  8062206 tttgtttaacatgtgcaatattgaacatgttaaggtaactaaaagtagtaacttttcattgaaaat 8062271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 67 - 122
Target Start/End: Complemental strand, 33048227 - 33048175
Alignment:
Q  67 aaaataacagttatttgttaaaaagttacactatatttaatataaaatgtacaaat 122  Q
    ||||||||| |||||| |||||||||||   ||||||||||||||||| |||||||    
T  33048227 aaaataacaattatttattaaaaagtta---tatatttaatataaaatatacaaat 33048175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 37 - 94
Target Start/End: Complemental strand, 35941167 - 35941110
Alignment:
Q  37 aaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagtta 94  Q
    |||| |||||||| || |||||||||||| |||| |||| |||||| |||||||||||    
T  35941167 aaaagaactaaaagtattaactttttattaaaaacaacatttatttattaaaaagtta 35941110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 90
Target Start/End: Original strand, 43317498 - 43317575
Alignment:
Q  13 aacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaa 90  Q
    |||||||||||||||  | |||||||| ||||||||| || ||||| ||| ||||||| |||| | |||| |||||||    
T  43317498 aacatgtgcaatattgtacatgttaaagcaactaaaagtagtaactattttttgaaaacaacaatcatttattaaaaa 43317575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 114
Target Start/End: Original strand, 50079870 - 50079966
Alignment:
Q  17 tgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatatttaatataaaat 114  Q
    |||||||||||| |||||||||| ||| ||||| || |||||||||||| |||| |  | |||||| ||||||| ||| |   |||||||||||||||    
T  50079870 tgtgcaatattatatatgttaaagcaattaaaa-tagtaactttttattaaaaaaattaattatttattaaaaaattatatattatttaatataaaat 50079966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 70
Target Start/End: Original strand, 51382372 - 51382437
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa 70  Q
    |||||| |||||||||||||||| || |||||||   |||||||| || |||||||| ||||||||    
T  51382372 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaa 51382437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 21 - 122
Target Start/End: Original strand, 25956665 - 25956764
Alignment:
Q  21 caatattacatatgttaaaacaactaaaattaataactttttattg-aaaataacagttatttgttaaaaagttacactatatttaatataaaatgtaca 119  Q
    ||||||| || || ||||||||||||| | |||||||||||| ||| |||| |||| |||||| || |||||||    |||||||||||| ||||||| |    
T  25956665 caatattgcacatattaaaacaactaataataataactttttcttgaaaaacaacaattatttatttaaaagtt---ttatatttaatattaaatgtata 25956761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 67; Significance: 2e-29; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 5 - 168
Target Start/End: Original strand, 2096871 - 2097032
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaat-aacagttatttgttaaaaagttacactatatt 103  Q
    |||||| |||||||||||||||| || | |||||| ||||||||| | | ||||||||||||||||  |||| |||||| |||||||||||   ||||||    
T  2096871 gtttgtctaacatgtgcaatattgcacaagttaaatcaactaaaagtgacaactttttattgaaaaacaacaattatttattaaaaagtta---tatatt 2096967  T
Q  104 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaattt 168  Q
    |||||||||||| |||| |  |||| |||| ||||||||||||| |||||||||||| |||||||    
T  2096968 taatataaaatgcacaagttccaatacaaacttaccattttgaacttcttaacatgtgcaaattt 2097032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 5 - 176
Target Start/End: Original strand, 24684836 - 24685006
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttatt--gaaaataacagttatttgttaaaaagttacactatat 102  Q
    ||||||||||||| ||||| |||||| |||||||||||||||| | || ||||||||| ||  ||||| |||| |||||| || |||||||    |||||    
T  24684836 gtttgtttaacatttgcaacattacacatgttaaaacaactaatagtagtaactttttttttggaaaacaacaattatttattcaaaagtt---ttatat 24684932  T
Q  103 ttaatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 176  Q
    ||||||| |||||||||| |  |||| |||| || | ||||| || |||||||||||| |||||||| ||||||    
T  24684933 ttaatattaaatgtacaagttccaatgcaaaatttctattttaaacttcttaacatgtgcaaatttgcacatga 24685006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 5 - 176
Target Start/End: Complemental strand, 9759319 - 9759151
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatattt 104  Q
    |||||| |||||||||||||||| || |||||||   |||||||| ||  || ||||||||||||  |||| ||||||   |||||||||   |||||||    
T  9759319 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagcaagtttttattgaaaccaacaattatttaacaaaaagtta---tatattt 9759223  T
Q  105 aatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 176  Q
    |||| ||||||| ||| |  |||| |||| |||| ||||| || |||||||||||| |||||||||||||||    
T  9759222 aatacaaaatgttcaacttccaatgcaaagttactattttaaatttcttaacatgtgcaaatttgtacatga 9759151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 5 - 174
Target Start/End: Original strand, 19468194 - 19468361
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttatt-gaaaataacagttatttgttaaaaagttacactatatt 103  Q
    |||||| |||||||||||| ||| || |||||||||||||||| | || ||||||||| || ||||| |||| |||||| || |||||||    ||||||    
T  19468194 gtttgtctaacatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaacaacaattatttattcaaaagtt---ttatatt 19468290  T
Q  104 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacat 174  Q
    |||||| |||||||||| |  |||| |||| || | ||||| || |||||||||||| |||||||| ||||    
T  19468291 taatattaaatgtacaagtttcaatacaaaatttctattttaaacttcttaacatgtgcaaatttgcacat 19468361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 7 - 174
Target Start/End: Complemental strand, 19451076 - 19450911
Alignment:
Q  7 ttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattg-aaaataacagttatttgttaaaaagttacactatattta 105  Q
    |||| |||||||||||| ||| || |||||||||||||||| | || ||||||||| ||| |||| |||| |||||| || |||||||    ||||||||    
T  19451076 ttgtctaacatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaacaacaattatttattcaaaagttt---tatattta 19450980  T
Q  106 atataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacat 174  Q
    |||| |||||||||| |  |||| |||| || | ||||| || |||||||||||| |||||||| ||||    
T  19450979 atattaaatgtacaagttccaatacaaaatttctattttaaacttcttaacatgtgcaaatttgcacat 19450911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 5 - 176
Target Start/End: Complemental strand, 16667562 - 16667393
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattg-aaaataacagttatttgttaaaaagttacactatatt 103  Q
    |||||| |||||||||||| ||| || ||||||| ||| |||||| || ||| |||| |||| |||| |||| |||||| |||||||| |||   |||||    
T  16667562 gtttgtctaacatgtgcaacattgcacatgttaagacatctaaaagtagtaatttttcattgaaaaacaacacttatttattaaaaagctac---atatt 16667466  T
Q  104 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 176  Q
    |||||||||||  |||| |  ||| | ||| ||| |||||| || |||||||||||| |||||||| ||||||    
T  16667465 taatataaaatacacaagtttcaagttaaaattatcattttaaacttcttaacatgtgcaaatttgcacatga 16667393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 5 - 169
Target Start/End: Original strand, 50352303 - 50352464
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatattt 104  Q
    |||||| |||||||||||||||| || |||||||   |||||||| ||  || ||||||||||||  |||| ||||||   |||||||||   |||||||    
T  50352303 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagcaagtttttattgaaaccaacaattatttaacaaaaagtta---tatattt 50352399  T
Q  105 aatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttg 169  Q
    |||| ||||||| ||| |  |||| |||| |||| ||||| || |||||||||||| ||||||||    
T  50352400 aatacaaaatgttcaagttccaatgcaaaattactattttaaatttcttaacatgtgcaaatttg 50352464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 5 - 176
Target Start/End: Original strand, 17409824 - 17409993
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattg-aaaataacagttatttgtt-aaaaagttacactatat 102  Q
    |||||| |||||||||||| ||| || |||||||||||||||| | || ||||||||| ||| |||| |||| |||||| || ||||| ||    |||||    
T  17409824 gtttgtctaacatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttgaaaaacaacaattatttattcaaaaaatt----tatat 17409919  T
Q  103 ttaatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 176  Q
    ||||||| |||||||||| |  |||| |||| || | ||||| || |||||| ||||| |||||||| ||||||    
T  17409920 ttaatattaaatgtacaagttccaatacaaagtttctattttaaacttcttatcatgtgcaaatttgcacatga 17409993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 7 - 176
Target Start/End: Original strand, 49181074 - 49181241
Alignment:
Q  7 ttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaat-aacagttatttgttaaaaagttacactatattta 105  Q
    |||| ||| |||||||||||| || |||||||   |||||||| ||  ||| ||| ||||||||  |||| | |||| || ||||||||||   ||||||    
T  49181074 ttgtctaaaatgtgcaatattgcacatgttaaggaaactaaaagtagcaacctttaattgaaaaacaacaatcatttattgaaaagttaca---tattta 49181170  T
Q  106 atataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 176  Q
    |||||||||| |||| |  |||| ||||||||| |||||||| ||||||||| || |||||||| ||||||    
T  49181171 atataaaatgcacaagttacaatacaaatttactattttgaacttcttaacaggtgcaaatttgcacatga 49181241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 5 - 113
Target Start/End: Original strand, 7349689 - 7349794
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa-taacagttatttgttaaaaagttacactatatt 103  Q
    |||||| ||||| |||||||||| || |||||||  ||||||||| ||||||||||| ||||||||  |||| ||||||||| |||||||||   |||||    
T  7349689 gtttgtctaacacgtgcaatattgcacatgttaaggcaactaaaagtaataacttttcattgaaaaccaacaattatttgtt-aaaagttac---atatt 7349784  T
Q  104 taatataaaa 113  Q
    ||||||||||    
T  7349785 taatataaaa 7349794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 89
Target Start/End: Complemental strand, 10813658 - 10813587
Alignment:
Q  19 tgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa-taacagttatttgttaaaa 89  Q
    ||||||||| ||||||||||  ||||||||| ||||||||||||||||||||  |||| |||||||||||||    
T  10813658 tgcaatattgcatatgttaaggcaactaaaagtaataactttttattgaaaaccaacaattatttgttaaaa 10813587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 5 - 174
Target Start/End: Original strand, 40049559 - 40049725
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatattt 104  Q
    |||||| |||||||||||||||| || ||||||||  |||||||| || ||| ||||||| ||||  |||| ||||||   ||||| |||   |||||||    
T  40049559 gtttgtctaacatgtgcaatattgcacatgttaaagtaactaaaagtagtaagtttttatagaaaccaacaattatttaacaaaaaatta---tatattt 40049655  T
Q  105 aatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacat 174  Q
    |||| |||||||  || |  |||| |||| |||| ||||| || |||||||||||| |||||||| ||||    
T  40049656 aataaaaaatgttaaagttccaatgcaaaattactattttaaatttcttaacatgtgcaaatttgcacat 40049725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 168
Target Start/End: Complemental strand, 8736988 - 8736828
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattg-aaaataacagttatttgttaaaaagttacactatatt 103  Q
    |||||| |||||||||||| ||| || ||||||| ||| |||||| || ||| ||||||||| |||| || | |||||| ||||||||||||   |||||    
T  8736988 gtttgtctaacatgtgcaacattgcacatgttaagacatctaaaagtagtaattttttattgaaaaacaaaacttatttattaaaaagttac---atatt 8736892  T
Q  104 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaattt 168  Q
    |||||| ||||| || | |  ||| ||||| |||||| ||| || |||||||||||| |||||||    
T  8736891 taatatgaaatgcac-agttccaagtcaaagttaccactttaaatttcttaacatgtgcaaattt 8736828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 176
Target Start/End: Original strand, 23545476 - 23545645
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattg-aaaataacagttatttgttaaaaagttacactatatt 103  Q
    |||||| |||||||||||| ||| || |||||||||||||||| | || ||| ||||| ||| |||| |||| |||||| || |||||||    ||||||    
T  23545476 gtttgtctaacatgtgcaacattgcacatgttaaaacaactaatagtagtaattttttcttgaaaaacaacaattatttattcaaaagtt---ttatatt 23545572  T
Q  104 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 176  Q
    |||||| |||||||||| |  |||| |||| ||   ||||| || || ||||||||| |||||||| ||||||    
T  23545573 taatattaaatgtacaatttccaatacaaaatttatattttaaacttattaacatgtgcaaatttgcacatga 23545645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 176
Target Start/End: Original strand, 27019260 - 27019429
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttatt-gaaaataacagttatttgttaaaaagttacactatatt 103  Q
    |||||| |||| ||||||| ||| || |||||||||||||||| | || ||||||||| || ||||| |||| |||||| || |||||||    ||||||    
T  27019260 gtttgtctaacgtgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaacaacaattatttattcaaaagtt---ttatatt 27019356  T
Q  104 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 176  Q
    |||||| |||||||||| |  |||| |||| || | ||||| || || ||||||| | |||||||| ||||||    
T  27019357 taatattaaatgtacaagtttcaatacaaaatttctattttaaactttttaacatatgcaaatttgcacatga 27019429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 176
Target Start/End: Original strand, 34941278 - 34941447
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattg-aaaataacagttatttgttaaaaagttacactatatt 103  Q
    |||||| ||||||||| |||||| || || ||||   |||||||| ||| |||||||||||| |||| ||||  ||||| |||||||||||   ||||||    
T  34941278 gtttgtctaacatgtgtaatattgcacatattaaggtaactaaaagtaacaactttttattgaaaaacaacaactatttattaaaaagtta---tatatt 34941374  T
Q  104 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 176  Q
     |||| ||||||||||| |  |||| |||| |||| ||||| || |||||| ||||| |||||| | ||||||    
T  34941375 aaatacaaaatgtacaagttccaatgcaaaattactattttaaacttcttatcatgtgcaaattcgcacatga 34941447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 42 - 168
Target Start/End: Complemental strand, 37785001 - 37784877
Alignment:
Q  42 aactaaaattaataactttttattgaaaat-aacagttatttgttaaaaagttacactatatttaatataaaatgtacaaatagcaattcaaatttacca 140  Q
    |||||||| ||  ||||||||||||||||  || | | |||| |||||||||||||   ||||||| |||||||| ||||||  ||||  |||||||| |    
T  37785001 aactaaaagtagcaactttttattgaaaaacaataatcatttattaaaaagttaca---tatttaacataaaatgcacaaattacaatataaatttacta 37784905  T
Q  141 ttttgaaattcttaacatgttcaaattt 168  Q
    ||||||| |||||||||||| |||||||    
T  37784904 ttttgaacttcttaacatgtccaaattt 37784877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 6875501 - 6875608
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttatt-gaaaataacagttatttgttaaaaagttacactatatt 103  Q
    |||||| |||||| ||||||||| || |||||||||||||||||| || |||  ||||||| ||||||| || |||||| || ||||||||   || |||    
T  6875501 gtttgtctaacatttgcaatattgcacatgttaaaacaactaaaaatagtaatattttattggaaaatatcaattatttattgaaaagtta---taaatt 6875597  T
Q  104 taatataaaat 114  Q
    |||||||||||    
T  6875598 taatataaaat 6875608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 121
Target Start/End: Original strand, 25843291 - 25843406
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaat-aacagttatttgttaaaaag-ttacactatat 102  Q
    |||||| |||||||| |||||| | | |||||||| ||||||||| || |||||||||||||||||  ||||   ||||||||||||| |||   |||||    
T  25843291 gtttgtctaacatgtacaatataatacatgttaaagcaactaaaagtagtaactttttattgaaaaacaacaaccatttgttaaaaagctta---tatat 25843387  T
Q  103 ttaatataaaatgtacaaa 121  Q
    ||||||||||||| |||||    
T  25843388 ttaatataaaatgcacaaa 25843406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 20 - 176
Target Start/End: Original strand, 27362406 - 27362560
Alignment:
Q  20 gcaatattacatatgttaaaacaactaaaattaataactttttattgaaaat-aacagttatttgttaaaaagttacactatatttaatataaaatgtac 118  Q
    |||| ||| |||||||||| | | |||||| || ||| |||||||||||||  || | |||||| | |||||| ||||   |||||||||| ||||| ||    
T  27362406 gcaacattgcatatgttaagatatctaaaagtagtaattttttattgaaaaacaaaacttatttatcaaaaagctaca---tatttaatatgaaatgcac 27362502  T
Q  119 aaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 176  Q
    ||||  ||| ||||| |||||| ||| || |||||||||||| |||||||| ||||||    
T  27362503 aaattccaagtcaaaattaccactttaaacttcttaacatgtgcaaatttgcacatga 27362560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 168
Target Start/End: Original strand, 52391298 - 52391459
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaat-aacagttatttgttaaaaagttacactatatt 103  Q
    |||||| ||| ||||| ||| || || ||||||||| |||||| | || ||||||||| |||||||  |||| |||||| || |||||||    ||||||    
T  52391298 gtttgtctaatatgtgtaatgttgcacatgttaaaataactaatagtagtaacttttttttgaaaaacaacaattatttattcaaaagttt---tatatt 52391394  T
Q  104 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaattt 168  Q
    |||||| |||||||||| |  |||| |||| || | ||||| || |||||||||||| |||||||    
T  52391395 taatattaaatgtacaagttccaatacaaaatttctattttaaacttcttaacatgtgcaaattt 52391459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 176
Target Start/End: Complemental strand, 54495815 - 54495646
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaat-aacagttatttgttaaaaagttacactatatt 103  Q
    |||||| |||||||||||| ||| || ||||||| | | |||||| || ||| ||||| |||||||  || | |||||| |||||||| ||||   ||||    
T  54495815 gtttgtctaacatgtgcaacattgcacatgttaagatatctaaaagtagtaatttttttttgaaaaacaaaacttatttattaaaaagctaca---tatt 54495719  T
Q  104 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 176  Q
    |||||| ||||| |||| |  ||| | ||| |||||| ||| || |||||||||||| |||||||| ||||||    
T  54495718 taatatgaaatgcacaagttccaagttaaagttaccactttaaacttcttaacatgtgcaaatttgcacatga 54495646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 10389445 - 10389380
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa 70  Q
    |||||| ||||||||||||||||||| |||||| |  |||||||| || |||||||| ||||||||    
T  10389445 gtttgtctaacatgtgcaatattacacatgttatagtaactaaaagtattaacttttaattgaaaa 10389380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 120
Target Start/End: Complemental strand, 33632379 - 33632267
Alignment:
Q  6 tttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattg-aaaataacagttatttgttaaaaagttacactatattt 104  Q
    ||||| |||||||||||| |||| | |||| ||||||||||| | || ||||||||| ||| |||| |||| |||||| || |||||||    |||||||    
T  33632379 tttgtctaacatgtgcaacattatacatgtaaaaacaactaatagtagtaacttttttttgaaaaacaacaattatttattcaaaagtt---ttatattt 33632283  T
Q  105 aatataaaatgtacaa 120  Q
    ||||| ||||||||||    
T  33632282 aatattaaatgtacaa 33632267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 40681960 - 40682017
Alignment:
Q  16 atgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataa 73  Q
    |||||||||||| ||||||||||  ||||||||| || ||| ||||||||||||||||    
T  40681960 atgtgcaatattgcatatgttaagtcaactaaaaatagtaattttttattgaaaataa 40682017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 70
Target Start/End: Original strand, 49228357 - 49228422
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa 70  Q
    |||||| |||||||||||||||| ||||||||||   |||||||| || |||||||| ||||||||    
T  49228357 gtttgtctaacatgtgcaatattgcatatgttaaggtaactaaaagtagtaacttttcattgaaaa 49228422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 61 - 167
Target Start/End: Original strand, 1378075 - 1378178
Alignment:
Q  61 ttattgaaaataacagttatttgttaaaaagttacactatatttaatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgt 160  Q
    |||||||||| | || |||||| |||||| ||||   |||||||||||| |||||||||| |  |||   |||||||||||||| || ||||||||||||    
T  1378075 ttattgaaaacatcaattatttattaaaatgtta---tatatttaatattaaatgtacaagtttcaagataaatttaccattttaaatttcttaacatgt 1378171  T
Q  161 tcaaatt 167  Q
     ||||||    
T  1378172 gcaaatt 1378178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 6 - 120
Target Start/End: Complemental strand, 19838866 - 19838756
Alignment:
Q  6 tttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatattta 105  Q
    ||||| ||||||||| || ||| || |||||||||||||||| | |||||||||||| ||  ||| |||| |||||| || |||||||    ||||||||    
T  19838866 tttgtctaacatgtggaacattgcacatgttaaaacaactaatagtaataacttttt-ttttaaacaacaattatttattcaaaagtt---ttatattta 19838771  T
Q  106 atataaaatgtacaa 120  Q
    |||| ||||||||||    
T  19838770 atattaaatgtacaa 19838756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 168
Target Start/End: Original strand, 39876844 - 39876991
Alignment:
Q  18 gtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatatttaatataaaatgta 117  Q
    |||||||||| || |||||||   |||||||| || ||| ||||||||||||  |||| ||||||   |||||||||   ||||||| ||| |||||||     
T  39876844 gtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaaccaacaattatttaacaaaaagtta---tatatttgatacaaaatgtt 39876940  T
Q  118 caaatagcaattcaaatttaccattttgaaattcttaacatgttcaaattt 168  Q
    ||| |  |||| |||| |||| ||||| || |||||||||||| |||||||    
T  39876941 caagttccaatgcaaagttactattttaaatttcttaacatgtgcaaattt 39876991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 68
Target Start/End: Original strand, 45742368 - 45742431
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaa 68  Q
    |||||| |||||||||||| ||| || |||||||||||||||| | || ||||||||| |||||    
T  45742368 gtttgtctaacatgtgcaacattgcacatgttaaaacaactaatagtattaactttttcttgaa 45742431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 169
Target Start/End: Original strand, 55813920 - 55814026
Alignment:
Q  61 ttattgaaaat-aacagttatttgttaaaaagttacactatatttaatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatg 159  Q
    ||||||||||| |||| |||||| |||||||||||   ||||||||||| | |||||||||||  |||| |||| |||  ||||| || || ||||||||    
T  55813920 ttattgaaaatcaacaattatttattaaaaagtta---tatatttaatacagaatgtacaaatttcaatacaaaattattattttaaactttttaacatg 55814016  T
Q  160 ttcaaatttg 169  Q
    | ||||||||    
T  55814017 tgcaaatttg 55814026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 29 - 120
Target Start/End: Complemental strand, 13009909 - 13009820
Alignment:
Q  29 catatgttaaaacaactaaaattaataactttttattgaaaa-taacagttatttgttaaaaagttacactatatttaatataaaatgtacaa 120  Q
    ||||||||||||||||||||| || ||| ||||||||||||| ||| | ||||||  ||||||| ||   ||||||||||| ||||| |||||    
T  13009909 catatgttaaaacaactaaaagtattaagtttttattgaaaactaataattatttactaaaaagcta---tatatttaatacaaaatatacaa 13009820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 5 - 176
Target Start/End: Complemental strand, 47327070 - 47326901
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaat-aacagttatttgttaaaaagttacactatatt 103  Q
    |||||| |||| ||||||| ||| || ||||||| ||| |||||| || ||| |||| ||||||||  || | |||||| |||||||  ||||   ||||    
T  47327070 gtttgtctaacctgtgcaacattgcacatgttaagacatctaaaagtagtaatttttcattgaaaaacaaaacttatttattaaaaaactaca---tatt 47326974  T
Q  104 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 176  Q
    |||||| ||||| | || |  ||| ||||| |||||| ||| || |||||||||||| |||||||| ||||||    
T  47326973 taatatgaaatgcaaaagttccaagtcaaagttaccactttaaacttcttaacatgtgcaaatttgcacatga 47326901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 5 - 176
Target Start/End: Complemental strand, 47341866 - 47341697
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaat-aacagttatttgttaaaaagttacactatatt 103  Q
    |||||| |||| ||||||| ||| || ||||||| ||| |||||| || ||| |||| ||||||||  || | |||||| |||||||  ||||   ||||    
T  47341866 gtttgtctaacctgtgcaacattgcacatgttaagacatctaaaagtagtaatttttcattgaaaaacaaaacttatttattaaaaaactaca---tatt 47341770  T
Q  104 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 176  Q
    |||||| ||||| | || |  ||| ||||| |||||| ||| || |||||||||||| |||||||| ||||||    
T  47341769 taatatgaaatgcaaaagttccaagtcaaagttaccactttaaacttcttaacatgtgcaaatttgcacatga 47341697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 5 - 94
Target Start/End: Original strand, 49332333 - 49332423
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattg-aaaataacagttatttgttaaaaagtta 94  Q
    |||||| |||||||||||||||| || |||||||   || ||||| ||||||||||| |||| ||||||  | |||||| |||||||||||    
T  49332333 gtttgtctaacatgtgcaatatttcacatgttaaggtaattaaaagtaataacttttcattgaaaaatattaattatttattaaaaagtta 49332423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 82
Target Start/End: Complemental strand, 10658621 - 10658544
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttattt 82  Q
    |||||| ||||||||||||||||||| |||||||   |||||||| ||  || ||||||||||||  |||| ||||||    
T  10658621 gtttgtctaacatgtgcaatattacacatgttaaggtaactaaaagtagcaagtttttattgaaaccaacaattattt 10658544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 82
Target Start/End: Complemental strand, 10872766 - 10872689
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttattt 82  Q
    |||||| ||||||||||||||||||| |||||||   |||||||| ||  || ||||||||||||  |||| ||||||    
T  10872766 gtttgtctaacatgtgcaatattacacatgttaaggtaactaaaagtagcaagtttttattgaaaccaacaattattt 10872689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 168
Target Start/End: Original strand, 51691343 - 51691502
Alignment:
Q  6 tttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa-taacagttatttgttaaaaagttacactatattt 104  Q
    ||||| ||| |||||||| ||| || |||||||| |||||||||| | ||| | ||||||||||| ||| | |||||| |||||||| ||   |||||||    
T  51691343 tttgtctaaaatgtgcaacattgcacatgttaaagcaactaaaat-agtaagtctttattgaaaactaataattatttattaaaaagcta---tatattt 51691438  T
Q  105 aatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaattt 168  Q
    |||  ||||| ||||| |  |||| |||| |||| ||||  || |||||||||||| |||||||    
T  51691439 aattcaaaatatacaagttccaatgcaaagttactatttaaaatttcttaacatgtgcaaattt 51691502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 5 - 72
Target Start/End: Original strand, 3728249 - 3728317
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataac-tttttattgaaaata 72  Q
    |||||| |||||||| |||||||  | |||||| ||||||||||| || |||| |||||||||||||||    
T  3728249 gtttgtctaacatgtacaatattgaacatgttataacaactaaaagtagtaacttttttattgaaaata 3728317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 100 - 176
Target Start/End: Complemental strand, 18882352 - 18882276
Alignment:
Q  100 tatttaatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 176  Q
    |||||||||| |||||||||| |  |||| |||| || | ||||| || |||||||||||| |||||||| ||||||    
T  18882352 tatttaatattaaatgtacaagttccaatacaaaatttctattttaaacttcttaacatgtgcaaatttgcacatga 18882276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 58 - 115
Target Start/End: Complemental strand, 35645126 - 35645071
Alignment:
Q  58 tttttattgaaaa-taacagttatttgttaaaaagttacactatatttaatataaaatg 115  Q
    ||||||||||||| ||||| |||||| |||||||||||   ||||||||||||||||||    
T  35645126 tttttattgaaaaataacaattatttattaaaaagtta---tatatttaatataaaatg 35645071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 65; Significance: 3e-28; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 5 - 115
Target Start/End: Original strand, 42750289 - 42750396
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatattt 104  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||| |||||||||||||||||||| || | |||||| ||||||||||||| |   |||    
T  42750289 gtttgtttaacatgtgcaatattgcatatgttaaagcaactaaaaataataactttttattgaaaacaataattatttattaaaaagttacaat---ttt 42750385  T
Q  105 aatataaaatg 115  Q
    |||||||||||    
T  42750386 aatataaaatg 42750396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 6 - 176
Target Start/End: Complemental strand, 47457638 - 47457470
Alignment:
Q  6 tttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataa-ctttttattgaaaataacagttatttgttaaaaagttacactatattt 104  Q
    ||||| |||||||||||||||| || |||||||||||||||||| || |||  |||||||||||||||||| |||||| || ||||| |||||   || |    
T  47457638 tttgtctaacatgtgcaatattgcacatgttaaaacaactaaaagtagtaatttttttattgaaaataacaattatttatttaaaagctacac---atat 47457542  T
Q  105 aatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 176  Q
    ||||||||||| | ||||  ||| ||||| |||| | ||| || || ||||||||| |||||||| ||||||    
T  47457541 aatataaaatgcataaattccaagtcaaagttactactttaaattttttaacatgtgcaaatttgcacatga 47457470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 186 - 266
Target Start/End: Complemental strand, 19017925 - 19017845
Alignment:
Q  186 ttataccaacaataaaacatcatcaaataaaattatctaatgaacatgaacaaaacaagagcctatatatacacacaactt 266  Q
    |||||| ||||||||||||||||||||||||| |||||||||||||| | |||| ||||| |||||||  |||||||||||    
T  19017925 ttatactaacaataaaacatcatcaaataaaactatctaatgaacatcatcaaatcaagaacctatatcaacacacaactt 19017845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 4 - 176
Target Start/End: Original strand, 26300572 - 26300740
Alignment:
Q  4 tgtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatatt 103  Q
    ||||||| ||||||||| |||||| ||||||||||||||||||||| || ||| | | ||||||||| || |   | || |||||||||||   || |||    
T  26300572 tgtttgtctaacatgtgtaatattgcatatgttaaaacaactaaaagtattaattctgtattgaaaa-aaaaaaaaattattaaaaagtta---tacatt 26300667  T
Q  104 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 176  Q
    ||||| ||||| ||||| |  ||||||||| |||| ||||| || || ||||||||| |||||||||||||||    
T  26300668 taatacaaaatatacaagtttcaattcaaagttactattttaaactttttaacatgtgcaaatttgtacatga 26300740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 5 - 176
Target Start/End: Complemental strand, 24463132 - 24462964
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatattt 104  Q
    |||||| ||||||||| |||||| || |||||||  ||||||||| || ||| || |||||||||| ||||  ||||| |||||||  ||||   |||||    
T  24463132 gtttgtctaacatgtgaaatatttcacatgttaaggcaactaaaagtagtaatttcttattgaaaacaacaagtatttattaaaaaactaca---tattt 24463036  T
Q  105 aatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 176  Q
    |||||||||||||||||    || ||||| |||  ||||| || |||||||||||| |||||||| ||||||    
T  24463035 aatataaaatgtacaaactttaagtcaaagttattattttaaacttcttaacatgtgcaaatttgcacatga 24462964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 5 - 176
Target Start/End: Original strand, 33342989 - 33343157
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatattt 104  Q
    |||||| |||||||||||||||| || |||||||   |||||||| ||  || ||||||||||||  |||| ||||||   |||||||||   |||||||    
T  33342989 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagcaagtttttattgaaaccaacaattatttaacaaaaagtta---tatattt 33343085  T
Q  105 aatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 176  Q
    |||| ||||||| ||| |  |||| |||| |||| ||||| || |||||||||||| |||||||| ||||||    
T  33343086 aatacaaaatgttcaagttccaatacaaagttactattttaaatttcttaacatgtgcaaatttgcacatga 33343157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 7 - 176
Target Start/End: Original strand, 7170005 - 7170171
Alignment:
Q  7 ttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatatttaa 106  Q
    |||| |||||||||||||||| || |||||||  ||||||||| || ||||||||||||||||  |||| ||| || |||||||  |||   ||| ||||    
T  7170005 ttgtctaacatgtgcaatattgcacatgttaaggcaactaaaaatagtaactttttattgaaaccaacaattaattattaaaaatctac---ataattaa 7170101  T
Q  107 tataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 176  Q
    ||||||||| |||| |  ||| ||||| |||| | ||| || |||||| ||||| |||||||| ||||||    
T  7170102 tataaaatgcacaagttccaagtcaaagttactactttaaacttcttatcatgtgcaaatttgcacatga 7170171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 176
Target Start/End: Complemental strand, 25709570 - 25709408
Alignment:
Q  12 taacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattga-aaataacagttatttgttaaaaagttacactatatttaatata 110  Q
    ||||||||| |||||| || |||||||| ||||||||| || ||| |||||||||| ||| |||| | |||| |||||||| |||    ||||||||||     
T  25709570 taacatgtgaaatattgcacatgttaaatcaactaaaagtagtaattttttattgataaacaacaataatttattaaaaagctacc---tatttaatatg 25709474  T
Q  111 aaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 176  Q
    ||||| |||| |  |||| |||| |||| ||||| || |||||||||||| |||||||| ||||||    
T  25709473 aaatgaacaagttccaatacaaagttactattttaaacttcttaacatgtgcaaatttgcacatga 25709408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 176
Target Start/End: Original strand, 46290011 - 46290179
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatattt 104  Q
    |||||| |||||||||||| ||| || |||||||   |||||||| ||  || ||||||||||||  |||| ||||||   |||||||||   |||||||    
T  46290011 gtttgtctaacatgtgcaaaattgcacatgttaaggtaactaaaagtagcaagtttttattgaaaccaacaattatttaacaaaaagtta---tatattt 46290107  T
Q  105 aatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 176  Q
    |||| ||||||| ||| |  |||| |||| |||| ||||| || |||||||||||| |||||||| ||||||    
T  46290108 aatacaaaatgttcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaatttgcacatga 46290179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 176
Target Start/End: Original strand, 4969773 - 4969942
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattg-aaaataacagttatttgttaaaaagttacactatatt 103  Q
    |||||| |||||||||||| ||| || |||||||||||||||| | || || |||||| ||| ||||  | | |||||| || |||||||    ||||||    
T  4969773 gtttgtctaacatgtgcaacattgcacatgttaaaacaactaatagtagtagctttttcttggaaaactataattatttatttaaaagttt---tatatt 4969869  T
Q  104 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 176  Q
    |||||| |||||||||| |  |||| |||| || | ||||| || |||||||||||| |||||||| ||||||    
T  4969870 taatattaaatgtacaagttccaatacaaaatttctattttaaacttcttaacatgtgcaaatttgcacatga 4969942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 176
Target Start/End: Original strand, 19889341 - 19889509
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa-taacagttatttgttaaaaagttacactatatt 103  Q
    |||||| |||||||||||||||| || |||||||  ||||||||| || |||||||| ||||||||  |||| |||||| || |||||||||   |||||    
T  19889341 gtttgtctaacatgtgcaatattgcacatgttaaggcaactaaaagtagtaacttttcattgaaaaccaacaattatttatt-aaaagttac---atatt 19889436  T
Q  104 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 176  Q
    ||||||||||   |||| |  ||| ||||| |||| | ||| || |||||| ||||| |||||||| ||||||    
T  19889437 taatataaaaaacacaagttccaagtcaaagttactactttaaacttcttatcatgtgcaaatttgcacatga 19889509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 19868114 - 19868221
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattg-aaaataacagttatttgttaaaaagttacactatatt 103  Q
    |||||| |||||||||||||||| || ||||||| |||||||||| || ||| |||| |||| |||| | || |||||| | |||||||||   ||||||    
T  19868114 gtttgtctaacatgtgcaatattgcacatgttaagacaactaaaagtagtaaattttcattgaaaaacaccaattatttatcaaaaagtta---tatatt 19868210  T
Q  104 taatataaaat 114  Q
    |||||||||||    
T  19868211 taatataaaat 19868221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 176
Target Start/End: Original strand, 34270266 - 34270430
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatattt 104  Q
    |||||| |||||||||||||||| || |||||||   ||||||||     || ||||||||||||  |||| ||||||   |||||||||   |||||||    
T  34270266 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaag----aagtttttattgaaaccaacaattatttaacaaaaagtta---tatattt 34270358  T
Q  105 aatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 176  Q
    |||| ||||||| ||| |  |||| |||| |||| ||||| || |||||||||||| |||||||| ||||||    
T  34270359 aatacaaaatgttcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaatttgcacatga 34270430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 176
Target Start/End: Original strand, 9331962 - 9332130
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaat-aacagttatttgttaaaaagttacactatatt 103  Q
    |||||| |||||||||||||||| || |||||||   |||||||| || |||||||| ||||||||| |||| ||| ||| | ||| |||||   |||||    
T  9331962 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaatcaacaatta-ttgattaaatgttac---atatt 9332057  T
Q  104 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 176  Q
    ||||||||||   |||| |  ||| ||||| |||| | ||| || |||||||||||| |||||||| ||||||    
T  9332058 taatataaaaaacacaagtttcaagtcaaagttactaatttaaacttcttaacatgtgcaaatttgcacatga 9332130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 176
Target Start/End: Complemental strand, 23982933 - 23982764
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa-taacagttatttgttaaaaagttacactatatt 103  Q
    |||||| ||||||||||||||||| | |||||||  ||||||||| || |||||||| ||| ||||  |||| ||| || ||||||| |||    |||||    
T  23982933 gtttgtctaacatgtgcaatattatacatgttaaggcaactaaaagtagtaacttttcattcaaaaccaacaattaattattaaaaactta---aatatt 23982837  T
Q  104 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 176  Q
    |||||||||||  |||| |  ||| ||||| |||| | ||| || |||||||| ||| |||||||| ||||||    
T  23982836 taatataaaatacacaagttccaagtcaaagttactactttaaatttcttaacgtgtgcaaatttgcacatga 23982764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 176
Target Start/End: Original strand, 33072072 - 33072150
Alignment:
Q  98 tatatttaatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 176  Q
    ||||||||||| ||||||| |||||  |||| |||| |||| ||||| || |||||||||||| |||||||| ||||||    
T  33072072 tatatttaatacaaaatgttcaaattccaatgcaaagttactattttaaatttcttaacatgtacaaatttgcacatga 33072150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 176
Target Start/End: Complemental strand, 36548636 - 36548469
Alignment:
Q  6 tttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa-taacagttatttgttaaaaagttacactatattt 104  Q
    ||||| |||||||||||||||| || |||||||   |||||||| || ||| |||||||||||||  |||| |||||  ||||| | ||||   ||||||    
T  36548636 tttgtctaacatgtgcaatattgcacatgttaagggaactaaaagtagtaattttttattgaaaaccaacaattattgattaaata-ttac---atattt 36548541  T
Q  105 aatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 176  Q
    |||||||||  |||||||   || ||||| |||| | ||| || |||||||||||| |||||||| ||||||    
T  36548540 aatataaaaaatacaaattttaagtcaaagttactaatttaaacttcttaacatgtgcaaatttgcacatga 36548469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 158
Target Start/End: Complemental strand, 47708065 - 47707911
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaacta---aaattaataactttttattgaaaat-aacagttatttgttaaaaagttacactat 100  Q
    |||||| || ||| |||||| ||||| |||||||||||||||   ||| ||| ||  |||||| |||||  |||| |||||| |||||||||||   |||    
T  47708065 gtttgtctatcatatgcaatgttacacatgttaaaacaactactaaaagtaacaagattttatggaaaaacaacaattatttattaaaaagtta---tat 47707969  T
Q  101 atttaatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacat 158  Q
    |||||||| |||||||| || |  ||||||||| |||| ||||| || ||||||||||    
T  47707968 atttaatacaaaatgtataagtttcaattcaaaattactattttaaacttcttaacat 47707911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 32 - 122
Target Start/End: Complemental strand, 3530264 - 3530177
Alignment:
Q  32 atgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatatttaatataaaatgtacaaat 122  Q
    |||||||| ||| ||| | |||||| ||||||||||||| |||| |||||| ||||||| |||   ||||||| |||||||||| ||||||    
T  3530264 atgttaaagcaattaagaataataattttttattgaaaacaacaattatttattaaaaaatta---tatatttgatataaaatgcacaaat 3530177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 176
Target Start/End: Complemental strand, 8091463 - 8091321
Alignment:
Q  32 atgttaaaacaactaaaattaataactttttattgaaaat-aacagttatttgttaaaaagttacactatatttaatataaaatgtacaaatagcaattc 130  Q
    |||| ||| ||||||||| ||  || |||||||||||||| || | |||||| |||||||||||   ||||||||| | |||||||| || |  |||| |    
T  8091463 atgtcaaagcaactaaaagtagcaaatttttattgaaaatcaataattatttattaaaaagtta---tatatttaacacaaaatgtaaaagttacaatgc 8091367  T
Q  131 aaatttaccattttgaaattcttaacatgttcaaatttgtacatga 176  Q
    ||| |||| ||||| || ||||||||||||  ||||||| ||||||    
T  8091366 aaagttactattttaaacttcttaacatgtgtaaatttgcacatga 8091321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 130 - 176
Target Start/End: Complemental strand, 26050516 - 26050470
Alignment:
Q  130 caaatttaccattttgaaattcttaacatgttcaaatttgtacatga 176  Q
    ||||||||||||||| || |||||||||||| |||||||| ||||||    
T  26050516 caaatttaccattttaaatttcttaacatgtgcaaatttgcacatga 26050470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 130 - 176
Target Start/End: Complemental strand, 26059875 - 26059829
Alignment:
Q  130 caaatttaccattttgaaattcttaacatgttcaaatttgtacatga 176  Q
    ||||||||||||||| || |||||||||||| |||||||| ||||||    
T  26059875 caaatttaccattttaaatttcttaacatgtgcaaatttgcacatga 26059829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 98 - 176
Target Start/End: Complemental strand, 29398221 - 29398143
Alignment:
Q  98 tatatttaatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 176  Q
    |||||||||||| |||||||||| |  |||| |||| || | ||||| || |||||||||||| |||||||| ||||||    
T  29398221 tatatttaatattaaatgtacaagttccaatacaaaatttctattttaaacttcttaacatgtgcaaatttgaacatga 29398143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 70
Target Start/End: Original strand, 24250314 - 24250379
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa 70  Q
    |||||| |||||||||||||||| || |||||||   |||||||| || |||||||| ||||||||    
T  24250314 gtttgtctaacatgtgcaatattgcacatgttaaggaaactaaaagtattaacttttcattgaaaa 24250379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 29398292 - 29398227
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa 70  Q
    |||||| |||||||||||| ||| || |||||||||||||||| | || ||| |||| ||||||||    
T  29398292 gtttgtctaacatgtgcaacattgcacatgttaaaacaactaataatactaatttttcattgaaaa 29398227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 15 - 94
Target Start/End: Original strand, 12650831 - 12650911
Alignment:
Q  15 catgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa-taacagttatttgttaaaaagtta 94  Q
    |||||||||||||  | |||||||  ||||||||| || |||||||| |||||||| || || |||||| |||||||||||    
T  12650831 catgtgcaatattgtacatgttaagccaactaaaaatagtaacttttcattgaaaactaccaattatttattaaaaagtta 12650911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 63; Significance: 5e-27; HSPs: 45)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 5 - 176
Target Start/End: Original strand, 26682068 - 26682237
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataa-ctttttattgaaaataacagttatttgttaaaaagttacactatatt 103  Q
    |||||| |||||||||||||||| || |||||||||||||||||| || |||  ||||||||||||| |||| |||||| |||||||| |||||   |||    
T  26682068 gtttgtctaacatgtgcaatattgcacatgttaaaacaactaaaagtagtaatttttttattgaaaacaacaattatttattaaaaagctacac---att 26682164  T
Q  104 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 176  Q
    |||||||||||| |||| |  ||| ||||| |||| | ||| || |||||||||||| |||||||| ||||||    
T  26682165 taatataaaatgcacaagttccaagtcaaagttactactttaaatttcttaacatgtgcaaatttgcacatga 26682237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 5 - 176
Target Start/End: Original strand, 6818017 - 6818186
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattg-aaaataacagttatttgttaaaaagttacactatatt 103  Q
    |||||| ||||||||||||||||  ||||||||||  |||||||| || |||||||  |||| |||| |||| |||||| ||||||||||    |||| |    
T  6818017 gtttgtctaacatgtgcaatattgtatatgttaaaggaactaaaaatagtaactttacattgaaaaagaacaattatttattaaaaagtt---ttatagt 6818113  T
Q  104 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 176  Q
    |||||||||||| |||| |  | || ||| ||||| ||||| || |||||||||||| |||||||| ||||||    
T  6818114 taatataaaatgcacaagttccgatacaattttactattttaaacttcttaacatgtacaaatttgcacatga 6818186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 5 - 176
Target Start/End: Original strand, 31812113 - 31812282
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa-taacagttatttgttaaaaagttacactatatt 103  Q
    |||||| |||||||||||| ||| || ||||||| | | |||||| || ||| ||||||||||||| ||| | |||||| |||||||| ||||   ||||    
T  31812113 gtttgtctaacatgtgcaacattgcacatgttaagatatctaaaagtagtaattttttattgaaaaataaaacttatttattaaaaagctaca---tatt 31812209  T
Q  104 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 176  Q
    |||||| ||||| |||| |  ||| ||||| |||||||||| || ||||||| |||| |||||||| ||||||    
T  31812210 taatatgaaatgcacaagttccaagtcaaaattaccattttaaacttcttaatatgtgcaaatttgcacatga 31812282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 5 - 176
Target Start/End: Complemental strand, 3306232 - 3306064
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatattt 104  Q
    |||||| |||||||||||||||| || |||||||   |||||||| || ||| ||||||||||||  |||| ||||||   |||||||||   |||||||    
T  3306232 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaaccaacaattatttaacaaaaagtta---tatattt 3306136  T
Q  105 aatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 176  Q
     ||| ||||||| ||| |  |||| |||| |||| ||||| || |||||||||||| |||||||| ||||||    
T  3306135 gatacaaaatgttcaagtttcaatgcaaagttactattttaaatttcttaacatgtgcaaatttgcacatga 3306064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 176
Target Start/End: Original strand, 20514632 - 20514802
Alignment:
Q  5 gtttgtttaacatgtgcaa-tattacatatgttaaaacaactaaaattaataactttttattgaaaa-taacagttatttgttaaaaagttacactatat 102  Q
    |||||| |||||||||||| |||| || ||| |||| ||||| ||| || ||| || |||||||||| || || |||||| |||||||||||   |||||    
T  20514632 gtttgtctaacatgtgcaaatattgcacatggtaaagcaacttaaagtagtaatttcttattgaaaaataccaattatttattaaaaagtta---tatat 20514728  T
Q  103 ttaatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 176  Q
    |||||||||||||||||| |  |||  |||| |||||||||| || |||||||| ||| ||||| || ||||||    
T  20514729 ttaatataaaatgtacaagttccaagacaaacttaccattttaaatttcttaacctgtgcaaatatgcacatga 20514802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 176
Target Start/End: Original strand, 2161388 - 2161556
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatattt 104  Q
    |||||| |||||||||||||||| || |||||||   |||||||| ||  || ||||||||||||  |||| ||||||   |||||||||   |||||||    
T  2161388 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagcaagtttttattgaaaccaacaattatttaacaaaaagtta---tatattt 2161484  T
Q  105 aatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 176  Q
    |||  ||||||| ||| |  |||| |||| |||| ||||| || |||||||||||| |||||||| ||||||    
T  2161485 aattcaaaatgttcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaatttgcacatga 2161556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 70
Target Start/End: Original strand, 7750668 - 7750733
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa 70  Q
    |||||| |||||||||||||||| || |||||||||||||||||| ||  ||||||||||||||||    
T  7750668 gtttgtctaacatgtgcaatattgcacatgttaaaacaactaaaagtagcaactttttattgaaaa 7750733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 5 - 169
Target Start/End: Original strand, 12131983 - 12132145
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaata-acagttatttgttaaaaagttacactatatt 103  Q
    |||||| |||||||||||| ||| || ||||||||  |||||||| ||  ||||||||||||||||   |||  ||||| |||||||||||   ||||||    
T  12131983 gtttgtctaacatgtgcaacattgcacatgttaaagaaactaaaagtagcaactttttattgaaaaaccacaagtatttattaaaaagtta---tatatt 12132079  T
Q  104 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttg 169  Q
    ||||||||||||| ||| |  |||| |||| |||| | ||| || |||||||||||| ||| ||||    
T  12132080 taatataaaatgttcaagttccaatacaaacttactactttaaatttcttaacatgtgcaagtttg 12132145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 176
Target Start/End: Complemental strand, 9580287 - 9580118
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattg-aaaataacagttatttgttaaaaagttacactatatt 103  Q
    |||||| ||| |||||||| ||| || |||||||||||||||| | || ||||||||| ||| |||| |||| |||||| || ||||   | | ||||||    
T  9580287 gtttgtctaatatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaacaacaattatttattcaaaa---aaattatatt 9580191  T
Q  104 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 176  Q
    |||||| |||||||||| |  |||| |||| || | ||||| || ||||||||||||  ||||||| ||||||    
T  9580190 taatattaaatgtacaagtttcaatacaaaatttctattttaaacttcttaacatgtgtaaatttgcacatga 9580118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 112
Target Start/End: Complemental strand, 14816303 - 14816198
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa-taacagttatttgttaaaaagttacactatatt 103  Q
    |||||| |||||||||||||||| || ||||||||  |||||||| || |||||||||||||||||  |||| ||| || ||||||| ||||   |||||    
T  14816303 gtttgtctaacatgtgcaatattgcacatgttaaagaaactaaaagtagtaactttttattgaaaaccaacaattaattattaaaaatttac---atatt 14816207  T
Q  104 taatataaa 112  Q
    |||||||||    
T  14816206 taatataaa 14816198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 112
Target Start/End: Original strand, 14829437 - 14829542
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa-taacagttatttgttaaaaagttacactatatt 103  Q
    |||||| |||||||||||||||| || ||||||||  |||||||| || |||||||||||||||||  |||| ||| || ||||||| ||||   |||||    
T  14829437 gtttgtctaacatgtgcaatattgcacatgttaaagaaactaaaagtagtaactttttattgaaaaccaacaattaattattaaaaatttac---atatt 14829533  T
Q  104 taatataaa 112  Q
    |||||||||    
T  14829534 taatataaa 14829542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 120
Target Start/End: Original strand, 38843704 - 38843817
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttatt-gaaaataacagttatttgttaaaaagttacactatatt 103  Q
    |||||| |||||||||||| ||| || |||||||||||||||| | || ||||||||| || ||||| |||| |||||| || |||||||    ||||||    
T  38843704 gtttgtctaacatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaacaacaattatttattcaaaagtt---ttatatt 38843800  T
Q  104 taatataaaatgtacaa 120  Q
    |||||| ||||||||||    
T  38843801 taatattaaatgtacaa 38843817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 5 - 70
Target Start/End: Original strand, 11923015 - 11923080
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa 70  Q
    |||||| |||||||||||||||| || | |||||||||||| ||| | ||||||||||||||||||    
T  11923015 gtttgtctaacatgtgcaatattgcacaagttaaaacaactgaaaatgataactttttattgaaaa 11923080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 5 - 70
Target Start/End: Original strand, 38527821 - 38527886
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa 70  Q
    |||||| |||||||||||||||| || |||||||  ||||||||| ||||||||||| ||||||||    
T  38527821 gtttgtctaacatgtgcaatattgcacatgttaaggcaactaaaagtaataacttttcattgaaaa 38527886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 41 - 176
Target Start/End: Complemental strand, 39024998 - 39024866
Alignment:
Q  41 caactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatatttaatataaaatgtacaaatagcaattcaaatttacca 140  Q
    ||||||||| |||||||||||||||||||  |||| ||| || |||||||  ||||   || ||||||||||||| ||||||  ||| ||||| |||| |    
T  39024998 caactaaaagtaataactttttattgaaaccaacaattaattattaaaaatctaca---tagttaatataaaatgcacaaattccaagtcaaagttacta 39024902  T
Q  141 ttttgaaattcttaacatgttcaaatttgtacatga 176  Q
     ||| || |||||| ||||| |||||||| ||||||    
T  39024901 ctttaaacttcttatcatgtgcaaatttgcacatga 39024866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 176
Target Start/End: Complemental strand, 12189766 - 12189597
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattg-aaaataacagttatttgtt-aaaaagttacactatat 102  Q
    ||||||||||||||||||  ||| || |||||||||||||||| | || ||||||||| ||| |||| |||| |||||| || ||||| ||    |||||    
T  12189766 gtttgtttaacatgtgcagcattgcacatgttaaaacaactaagagtattaactttttcttgaaaaacaacaattatttattcaaaaaatt----tatat 12189671  T
Q  103 ttaatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 176  Q
    ||||||| |||||||||| |  ||||  ||| || | ||||| || |||||| ||||| |||||||| ||||||    
T  12189670 ttaatattaaatgtacaagttccaatataaagtttctattttaaacttcttatcatgtgcaaatttgcacatga 12189597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 176
Target Start/End: Complemental strand, 12434194 - 12434025
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattg-aaaataacagttatttgtt-aaaaagttacactatat 102  Q
    ||||||||||||||||||  ||| || |||||||||||||||| | || ||||||||| ||| |||| |||| |||||| || ||||| ||    |||||    
T  12434194 gtttgtttaacatgtgcagcattgcacatgttaaaacaactaagagtattaactttttcttgaaaaacaacaattatttattcaaaaaatt----tatat 12434099  T
Q  103 ttaatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 176  Q
    ||||||| |||||||||| |  ||||  ||| || | ||||| || |||||| ||||| |||||||| ||||||    
T  12434098 ttaatattaaatgtacaagttccaatataaagtttctattttaaacttcttatcatgtgcaaatttgcacatga 12434025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 120
Target Start/End: Complemental strand, 34741813 - 34741730
Alignment:
Q  34 gttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatatttaatataaaatgtacaa 120  Q
    |||||||||||||||| ||| ||||||| |||||||| || | |||||| ||||||| |||   |||||||||||||||||| ||||    
T  34741813 gttaaaacaactaaaaataacaacttttaattgaaaacaataattatttattaaaaaatta---tatatttaatataaaatgcacaa 34741730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 5 - 91
Target Start/End: Complemental strand, 8284747 - 8284660
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttatt-gaaaataacagttatttgttaaaaag 91  Q
    |||||| ||||||||||| |||| || |||||||| ||||||||| || ||||||||||||  |||| |||| |||||| ||||||||    
T  8284747 gtttgtctaacatgtgcagtattgcacatgttaaagcaactaaaagtagtaactttttattaaaaaagaacaattatttattaaaaag 8284660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 5 - 169
Target Start/End: Original strand, 45005970 - 45006131
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttatt-gaaaataacagttatttgttaaaaagttacactatatt 103  Q
    |||||| |||||||||||| ||| || |||||||||||||||| | || ||||||||| || ||||| |||| |||||| || |||||||    ||||||    
T  45005970 gtttgtctaacatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaacaacaattatttattcaaaagtt---ttatatt 45006066  T
Q  104 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttg 169  Q
    |||||| | |||||||  |  |||| |||| || | ||||| || |||||||||||| ||||||||    
T  45006067 taatattagatgtacatgttccaatacaaaatt-ctattttaaacttcttaacatgtgcaaatttg 45006131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 90
Target Start/End: Original strand, 5298077 - 5298157
Alignment:
Q  13 aacatgtgcaatattacatatgttaaaacaactaaaattaataa---ctttttattgaaaataacagttatttgttaaaaa 90  Q
    |||||||||||||||||| |||||||||| ||||||| ||| ||    ||||||||||||| |||| |||||| |||||||    
T  5298077 aacatgtgcaatattacacatgttaaaactactaaaactaacaaattttttttattgaaaacaacaattatttattaaaaa 5298157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 176
Target Start/End: Complemental strand, 13328118 - 13327950
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa-taacagttatttgttaaaaagttacactatatt 103  Q
    |||||| |||||||||||||||| ||||||||||   |||||||| || |||||||| ||||||||  |||| ||| ||| | ||| |||||   |||||    
T  13328118 gtttgtctaacatgtgcaatattgcatatgttaaggtaactaaaagtagtaacttttcattgaaaaccaacaatta-ttgattaaatgttac---atatt 13328023  T
Q  104 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 176  Q
    ||||||||||   |||| |  ||| ||||| |||| | ||| || |||||||||||| |||||||| ||||||    
T  13328022 taatataaaaaacacaagtttcaagtcaaagttactaatttaaacttcttaacatgtgcaaatttgcacatga 13327950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 112
Target Start/End: Complemental strand, 35678452 - 35678347
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa-taacagttatttgttaaaaagttacactatatt 103  Q
    |||||| |||||||||||||||| || ||||||||  |||||||| || |||||||| ||||||||  |||| ||| || ||||||| ||||   |||||    
T  35678452 gtttgtctaacatgtgcaatattgcacatgttaaagaaactaaaagtagtaacttttcattgaaaaccaacaattaattattaaaaatttac---atatt 35678356  T
Q  104 taatataaa 112  Q
    |||||||||    
T  35678355 taatataaa 35678347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 176
Target Start/End: Complemental strand, 36967248 - 36967079
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattg-aaaataacagttatttgttaaaaagttacactatatt 103  Q
    |||||| |||||||||||| |||  | ||||||| |||||||| | || ||||||||| ||| |||| |||| |||| | || |||||||    ||||||    
T  36967248 gtttgtctaacatgtgcaacattgtacatgttaagacaactaatagtagtaactttttcttggaaaacaacaattatatattcaaaagttt---tatatt 36967152  T
Q  104 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 176  Q
    |||||| |||||| ||| |  |||| |||| || | ||||| || |||||||||||| |||||||| ||||||    
T  36967151 taatattaaatgtgcaagtttcaatacaaagtttctattttaaacttcttaacatgtgcaaatttgcacatga 36967079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 7140636 - 7140571
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa 70  Q
    |||||| |||||||||||||||| || |||||||   |||||||| || |||||||||||||||||    
T  7140636 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttattgaaaa 7140571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 70
Target Start/End: Original strand, 9824959 - 9825024
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa 70  Q
    |||||| |||||| |||||||||  |||||||||  ||| |||||||| |||||||||||||||||    
T  9824959 gtttgtctaacatatgcaatattgtatatgttaatgcaattaaaattagtaactttttattgaaaa 9825024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 119
Target Start/End: Complemental strand, 16445893 - 16445801
Alignment:
Q  25 attacatatgttaaaacaactaaaattaataactttttatt-gaaaataacagttatttgttaaaaagttacactatatttaatataaaatgtaca 119  Q
    ||||||||||||||||||||||| | || ||||||||| || ||||| |||| |||||| || |||||||    |||||||||||| |||||||||    
T  16445893 attacatatgttaaaacaactaatagtagtaactttttcttggaaaacaacaattatttattcaaaagtt---ttatatttaatattaaatgtaca 16445801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 40210998 - 40210933
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa 70  Q
    |||||| |||||||||||||||| ||||||||||   |||||||| || |||||||| ||||||||    
T  40210998 gtttgtctaacatgtgcaatattgcatatgttaaggtaactaaaagtattaacttttcattgaaaa 40210933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 6 - 66
Target Start/End: Complemental strand, 11947076 - 11947016
Alignment:
Q  6 tttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattg 66  Q
    ||||| |||||||| ||||||| || | |||||||||||||||| | ||||||||||||||    
T  11947076 tttgtctaacatgtacaatattgcacaagttaaaacaactaaaaatgataactttttattg 11947016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 113
Target Start/End: Original strand, 9743862 - 9743967
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa-taacagttatttgttaaaaagttacactatatt 103  Q
    |||||| ||||||||||||||||    ||||||| |||||||||| || ||| |||||||||||||  |||| |||||| || |||||||||   |||||    
T  9743862 gtttgtctaacatgtgcaatattgtgcatgttaagacaactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttac---atatt 9743957  T
Q  104 taatataaaa 113  Q
    ||||||||||    
T  9743958 taatataaaa 9743967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 120
Target Start/End: Complemental strand, 10974725 - 10974619
Alignment:
Q  12 taacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaat-aacagttatttgttaaaaagttacactatatttaatata 110  Q
    |||||| |||| ||||  |||||||||| ||||||||| || |||| ||||||||||||  || |  ||||| ||||||| |||||   |||||||||||    
T  10974725 taacatatgcactattgtatatgttaaagcaactaaaagtagtaacattttattgaaaaacaataactatttattaaaaaattaca---tatttaatata 10974629  T
Q  111 aaatgtacaa 120  Q
    ||||||||||    
T  10974628 aaatgtacaa 10974619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 176
Target Start/End: Complemental strand, 28015032 - 28014867
Alignment:
Q  7 ttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatatttaa 106  Q
    |||| ||||||||||||| ||||| | ||||||| |||| |    | ||||||||| || |||| |||| |||||| || |||||||    |||||||||    
T  28015032 ttgtctaacatgtgcaatgttacacaagttaaaataacttattgcagtaactttttttt-aaaacaacaattatttattcaaaagttt---tatatttaa 28014937  T
Q  107 tataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 176  Q
    ||| |||||||||| |  |||| |||| || | ||||| || |||||||||||| |||||||| ||||||    
T  28014936 tattaaatgtacaagttccaatacaaaatttctattttaaacttcttaacatgtgcaaatttgcacatga 28014867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 98 - 176
Target Start/End: Complemental strand, 2083156 - 2083078
Alignment:
Q  98 tatatttaatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 176  Q
    |||||||||||||||||| ||||||  |||| |||||||   |||||||| ||||||| ||||  ||||||| ||||||    
T  2083156 tatatttaatataaaatgaacaaatttcaatacaaatttgttattttgaacttcttaagatgtgtaaatttgcacatga 2083078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 5 - 51
Target Start/End: Complemental strand, 11117175 - 11117129
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaatt 51  Q
    |||||| |||||||||||||||| || |||||||| |||||||||||    
T  11117175 gtttgtctaacatgtgcaatattgcacatgttaaagcaactaaaatt 11117129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 5 - 176
Target Start/End: Original strand, 26834561 - 26834730
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaat-aacagttatttgttaaaaagttacactatatt 103  Q
    |||||| |||||| ||||| ||| || ||| ||| | | |||||| || ||| |||||||||||||  || | |||||| |||||||| ||||   ||||    
T  26834561 gtttgtctaacatatgcaacattgcacatgctaagatatctaaaagtagtaattttttattgaaaaacaaaacttatttattaaaaagctaca---tatt 26834657  T
Q  104 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 176  Q
    |||||| ||||| |||| |  ||| ||||| |||||||||| || ||||||| || | |||||||| ||||||    
T  26834658 taatatgaaatgcacaagttccaagtcaaaattaccattttaaatttcttaatatatgcaaatttgcacatga 26834730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 5 - 116
Target Start/End: Original strand, 32186186 - 32186295
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttatt-gaaaataacagttatttgttaaaaagttacactatatt 103  Q
    |||||||||||||| |||| ||| || |||||||||||||||| | || ||||||||| || ||||| |||| |||| | || |||||||    ||||||    
T  32186186 gtttgtttaacatgagcaacattgcaaatgttaaaacaactaatagtagtaactttttcttagaaaacaacatttatatattcaaaagtt---ttatatt 32186282  T
Q  104 taatataaaatgt 116  Q
    |||||| ||||||    
T  32186283 taatattaaatgt 32186295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 3 - 53
Target Start/End: Original strand, 37523756 - 37523806
Alignment:
Q  3 ttgtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaa 53  Q
    |||||||| |||||||| ||||||| || ||||||||||| ||||||||||    
T  37523756 ttgtttgtctaacatgtacaatattgcacatgttaaaacagctaaaattaa 37523806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 5 - 47
Target Start/End: Complemental strand, 38213123 - 38213081
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaa 47  Q
    ||||||||||||||||||| ||| || ||||||||||||||||    
T  38213123 gtttgtttaacatgtgcaacattgcacatgttaaaacaactaa 38213081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 32 - 90
Target Start/End: Original strand, 44091346 - 44091404
Alignment:
Q  32 atgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaa 90  Q
    ||||||||||||| |||| || ||| ||||||||||||| |||| |||||| |||||||    
T  44091346 atgttaaaacaacgaaaagtattaattttttattgaaaacaacaattatttattaaaaa 44091404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 70
Target Start/End: Original strand, 10129104 - 10129169
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa 70  Q
    |||||| |||||||||||||||| || |||||||   ||||||||||| ||| |||| ||||||||    
T  10129104 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaattagtaatttttcattgaaaa 10129169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 70
Target Start/End: Original strand, 12346006 - 12346071
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa 70  Q
    |||||| | |||||||||| |||||| |||||||||||| ||| | || ||||||||| |||||||    
T  12346006 gtttgtctgacatgtgcaacattacacatgttaaaacaattaatagtagtaactttttcttgaaaa 12346071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 32 - 89
Target Start/End: Original strand, 45516316 - 45516373
Alignment:
Q  32 atgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaa 89  Q
    ||||||| | |||||||| || |||||||||||||||| ||||| |||||| ||||||    
T  45516316 atgttaagataactaaaagtagtaactttttattgaaactaacaattatttattaaaa 45516373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 13 - 173
Target Start/End: Complemental strand, 1844731 - 1844572
Alignment:
Q  13 aacatgtgcaatattacatatgttaaaacaactaaaattaataactt-tttattgaaaa-taacagttatttgttaaaaagttacactatatttaatata 110  Q
    ||||||| ||||||| || | ||| |||||||||||| ||  || || |||||| |||| ||||| |||||| ||||||||||| |   |||||||||||    
T  1844731 aacatgtacaatattgcacacgttgaaacaactaaaagtagaaatttctttattaaaaagtaacaattatttattaaaaagttaaa---tatttaatata 1844635  T
Q  111 aaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtaca 173  Q
    ||||  | ||||  | || ||||||||  |||||||| ||||||||||||  ||| |||||||    
T  1844634 aaatacataaatttcgatacaaatttattattttgaatttcttaacatgtgtaaacttgtaca 1844572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 7 - 90
Target Start/End: Original strand, 35583368 - 35583453
Alignment:
Q  7 ttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttt---tattgaaaataacagttatttgttaaaaa 90  Q
    |||| |||||||| ||||||| || |||||||||||  |||||| || |||||||   ||||||||| |||| ||||||||||||||    
T  35583368 ttgtctaacatgtacaatattgcacatgttaaaacatttaaaat-aacaacttttatttattgaaaacaacaattatttgttaaaaa 35583453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 6 - 70
Target Start/End: Original strand, 40568314 - 40568378
Alignment:
Q  6 tttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa 70  Q
    ||||| |||||  ||||||||| || |||||||||||||||||| |  |||||||||||| ||||    
T  40568314 tttgtctaacacatgcaatatttcacatgttaaaacaactaaaagttgtaactttttattaaaaa 40568378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 50; Significance: 3e-19; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 5 - 175
Target Start/End: Complemental strand, 15411800 - 15411632
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattg-aaaataacagttatttgttaaaaagttacactatatt 103  Q
    |||||| |||||||||||||||| || ||||||||  |||||||| || ||| ||||||||| |||| |||| | |||| |||||||| |||   |||||    
T  15411800 gtttgtctaacatgtgcaatattgcacatgttaaagtaactaaaagtagtaattttttattgaaaaacaacaataatttattaaaaagctac---atatt 15411704  T
Q  104 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatg 175  Q
    |||||||||||| |||| |  |||  |||| |||| ||||| || |||||||||||| |||||||| |||||    
T  15411703 taatataaaatgaacaagtttcaagacaaagttactattttaaacttcttaacatgtgcaaatttgcacatg 15411632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 5 - 176
Target Start/End: Original strand, 9747317 - 9747486
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattg-aaaataacagttatttgttaaaaagttacactatatt 103  Q
    |||||| |||||||||||||| |||| ||||||||  |||||||| || ||||| ||||||| |||| ||||  ||||||| |||||| |||   |||||    
T  9747317 gtttgtctaacatgtgcaatagtacacatgttaaattaactaaaagtagtaactatttattgaaaaacaacaactatttgtaaaaaagctac---atatt 9747413  T
Q  104 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 176  Q
    |||||||||||| |||| |  |||  |||| |||| ||||| || ||||||||||||  ||||||| ||||||    
T  9747414 taatataaaatgaacaagttccaagacaaaattactattttaaacttcttaacatgtgaaaatttgcacatga 9747486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 5 - 169
Target Start/End: Complemental strand, 5583735 - 5583574
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatattt 104  Q
    |||||| |||||||||||||||| || |||||||   |||||||| ||  || ||||||||||||  |||| ||||||   |||||||||   |||||||    
T  5583735 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagcaagtttttattgaaaccaacaattatttaacaaaaagtta---tatattt 5583639  T
Q  105 aatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttg 169  Q
    |||| ||||||| ||| |  |||| |||| |||| ||||| || |||||||||||| ||||||||    
T  5583638 aatacaaaatgttcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaatttg 5583574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 5 - 176
Target Start/End: Original strand, 14377425 - 14377593
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa-taacagttatttgttaaaaagttacactatatt 103  Q
    |||||| ||||| |||||||||| || |||||||  ||||||||| || |||||||||||||||||  |||| ||||||||| |||||||||   |||||    
T  14377425 gtttgtctaacacgtgcaatattgcacatgttaaggcaactaaaagtagtaactttttattgaaaaccaacaattatttgtt-aaaagttac---atatt 14377520  T
Q  104 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 176  Q
    ||||||||||   |||| |  ||| ||||| |||| | ||| || |||||| ||||| |||||||| ||||||    
T  14377521 taatataaaaaacacaagtttcaagtcaaagttactactttaaacttcttatcatgtacaaatttgcacatga 14377593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 90
Target Start/End: Complemental strand, 12438825 - 12438740
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaa 90  Q
    |||||| |||||||||||||||| |||||||| | |||||||||| ||||||||||| ||| |||  |||| |||||| |||||||    
T  12438825 gtttgtataacatgtgcaatattgcatatgttcagacaactaaaaataataacttttcattaaaaccaacaattatttattaaaaa 12438740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 176
Target Start/End: Original strand, 45062207 - 45062367
Alignment:
Q  14 acatgtgcaatattacatatgttaaaacaactaaaattaataactttttatt-gaaaataacagttatttgttaaaaagttacactatatttaatataaa 112  Q
    |||||| |||||||| |||||||||||||| ||||| |  ||||||||||||  |||| || | |||||| ||||||||||||   || |||||||||||    
T  45062207 acatgtacaatattaaatatgttaaaacaattaaaagtggtaactttttattaaaaaacaaaaattatttattaaaaagttac---atgtttaatataaa 45062303  T
Q  113 atgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 176  Q
    ||| |||| |  |||   ||| |||| |||||||| ||||||| |||| |||||||| ||||||    
T  45062304 atgcacaagttccaaaataaagttactattttgaacttcttaatatgtgcaaatttgcacatga 45062367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 176
Target Start/End: Original strand, 23932565 - 23932734
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattg-aaaataacagttatttgttaaaaagttacactatatt 103  Q
    |||||| |||||||||||||||| || ||||||||  |||||||| || |||||||  |||| |||| |||| |||||| ||||||||||    |||| |    
T  23932565 gtttgtctaacatgtgcaatattgcacatgttaaaggaactaaaaatagtaactttacattgaaaaagaacaattatttattaaaaagtt---ttatagt 23932661  T
Q  104 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 176  Q
    |||||||||||| |||| |  | || ||| ||||| ||||| || ||||||| || | |||||||| ||||||    
T  23932662 taatataaaatgcacaagttccgatacaattttactattttaaacttcttaatatatgcaaatttgcacatga 23932734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 176
Target Start/End: Complemental strand, 27665221 - 27665053
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa-taacagttatttgttaaaaagttacactatatt 103  Q
    |||||| |||||||||||||||| || |||||||  ||||||||| || |||||||| ||||||||  |||| |||||| || |||||||||   |||||    
T  27665221 gtttgtctaacatgtgcaatattgcacatgttaaggcaactaaaagtagtaacttttcattgaaaaccaacaattatttatt-aaaagttac---atatt 27665126  T
Q  104 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 176  Q
    ||||||||||   |||| |  ||| ||||| |||| | ||| || |||||| ||||| |||||||| ||||||    
T  27665125 taatataaaaaacacaagttccaagtcaaagttactactttaaacttcttatcatgtgcaaatttgcacatga 27665053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 168
Target Start/End: Original strand, 43806360 - 43806521
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttatt-gaaaataacagttatttgttaaaaagttacactatatt 103  Q
    |||||| |||||||||||| ||| || |||||||||||| ||| | || ||||||||| || ||||| |||| |||||| || |||||||    ||||||    
T  43806360 gtttgtctaacatgtgcaacattgcacatgttaaaacaattaatagtagtaactttttcttggaaaacaacaattatttattcaaaagtt---ttatatt 43806456  T
Q  104 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaattt 168  Q
    |||||| |||||||||| |  |||| |||| || | ||||| || || ||||||||| |||||||    
T  43806457 taatattaaatgtacaagtttcaatacaaaatttctattttaaactttttaacatgtgcaaattt 43806521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 42 - 176
Target Start/End: Complemental strand, 24729718 - 24729586
Alignment:
Q  42 aactaaaattaataactttttattgaaaataac-agttatttgttaaaaagttacactatatttaatataaaatgtacaaatagcaattcaaatttacca 140  Q
    |||||||| || ||| ||||||||||||||||  | |||||| |||||||||||   | || |||||| ||||| |||||||  |||| |||| |||| |    
T  24729718 aactaaaaatagtaaatttttattgaaaataaataattatttattaaaaagtta---tgtaattaatacaaaatatacaaattccaatgcaaagttacta 24729622  T
Q  141 ttttgaaattcttaacatgttcaaatttgtacatga 176  Q
    |||| || |||||||||||| |||||||| ||||||    
T  24729621 ttttaaatttcttaacatgtgcaaatttgcacatga 24729586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 5 - 169
Target Start/End: Complemental strand, 34214129 - 34213965
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa-taacagttatttgttaaaaagttacactatatt 103  Q
    |||||| ||||||||  |||| | || |||||||| ||||||||| || ||| |||||||||||||  |||| ||||||  |||||||||| | ||| ||    
T  34214129 gtttgtctaacatgtataatactgcacatgttaaagcaactaaaaatagtaagtttttattgaaaaccaacaattattttataaaaagttata-tatttt 34214031  T
Q  104 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttg 169  Q
    ||||| ||||||| ||| |  ||||  ||| |||| ||||| || |||||||||||| ||||||||    
T  34214030 taataaaaaatgttcaagttccaatgaaaaattactattttaaatttcttaacatgtgcaaatttg 34213965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 113
Target Start/End: Original strand, 34817544 - 34817649
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatattt 104  Q
    |||||| |||||| ||||||||| ||  | |||||| |||||||| ||  |||| ||||||||||| |||| |||||| |||||||||||   |||||||    
T  34817544 gtttgtctaacatatgcaatattgcacgtattaaaataactaaaaatatcaactatttattgaaaacaacaattatttattaaaaagtta---tatattt 34817640  T
Q  105 aatataaaa 113  Q
    |||| ||||    
T  34817641 aataaaaaa 34817649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 94
Target Start/End: Original strand, 39367059 - 39367149
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaat-aacagttatttgttaaaaagtta 94  Q
    |||||| |||||||| ||  ||||| ||||||||| ||||||||||||| ||  ||||||||||||| || | |||||| |||||||||||    
T  39367059 gtttgtctaacatgtacaccattacgtatgttaaagcaactaaaattaacaaaattttattgaaaatcaataattatttattaaaaagtta 39367149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 176
Target Start/End: Complemental strand, 7757963 - 7757795
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatattt 104  Q
    |||||| |||||||||||| |||  | |||||||   |||||||| ||| || |||||||| |||  |||| ||||||   |||||||||   |||||||    
T  7757963 gtttgtctaacatgtgcaaaattgtacatgttaaggtaactaaaagtaacaagtttttattaaaaccaacaattatttaacaaaaagtta---tatattt 7757867  T
Q  105 aatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 176  Q
    |||| ||||||| ||| |  |||| |||| |||| ||||| || ||||||||||||  ||||||| ||||||    
T  7757866 aatacaaaatgttcaagttccaatgcaaagttactattttaaatttcttaacatgtgtaaatttgcacatga 7757795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 70
Target Start/End: Original strand, 12016667 - 12016732
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa 70  Q
    |||||| |||||||||||||||| || |||||||   |||||||| || |||||||||||||||||    
T  12016667 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttattgaaaa 12016732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 58 - 160
Target Start/End: Complemental strand, 2580082 - 2579983
Alignment:
Q  58 tttttattgaaaataacagttatttgttaaaaagttacactatatttaatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaaca 157  Q
    |||||||| ||||||||| |||||||||||||| ||   | |||||||| ||||||| ||||||   |||| |||| |||| | |||||| |||||||||    
T  2580082 tttttattaaaaataacaattatttgttaaaaaatt---caatatttaacataaaatatacaaaattcaatacaaacttactagtttgaacttcttaaca 2579986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 6 - 70
Target Start/End: Original strand, 7720116 - 7720180
Alignment:
Q  6 tttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa 70  Q
    ||||| |||||||||||| ||| || |||||||||||||||| | || ||||||||| |||||||    
T  7720116 tttgtctaacatgtgcaacattgcacatgttaaaacaactaatagtagtaacttttttttgaaaa 7720180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 100 - 176
Target Start/End: Complemental strand, 26003431 - 26003355
Alignment:
Q  100 tatttaatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 176  Q
    |||||||||| ||||||||||||  |||| |||| || | ||||| || |||||||||||| |||||||| ||||||    
T  26003431 tatttaatatcaaatgtacaaatttcaatacaaaatttctattttaaacttcttaacatgtgcaaatttgcacatga 26003355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 114
Target Start/End: Original strand, 2051639 - 2051721
Alignment:
Q  30 atatgttaaaacaactaaaattaataactttttattg-aaaataacagttatttgttaaaaagttacactatatttaatataaaat 114  Q
    |||||||||||||||||||||||  || ||||||||| |||| |||| |||||| ||||||| |||    ||||||||||||||||    
T  2051639 atatgttaaaacaactaaaattagcaagtttttattgaaaaacaacaattatttattaaaaattta---aatatttaatataaaat 2051721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 91
Target Start/End: Complemental strand, 43388944 - 43388857
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaat-aacagttatttgttaaaaag 91  Q
    |||||| ||| |||||||||||| || || ||||| ||||||||| ||  || |||||||||||||| |||| |||||| ||||||||    
T  43388944 gtttgtctaatatgtgcaatattgcacatcttaaagcaactaaaagtagaaattttttattgaaaatcaacaattatttattaaaaag 43388857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 5 - 176
Target Start/End: Original strand, 19228426 - 19228594
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa-taacagttatttgttaaaaagttacactatatt 103  Q
    |||||| |||||||||||||||| || |||||||   |||||||| || |||||||| ||||||||  |||| ||| ||| | |||||||||   |||||    
T  19228426 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaaccaacaatta-ttgattaaaagttac---atatt 19228521  T
Q  104 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 176  Q
    ||||| ||||   |||| |  ||| ||||| |||| | ||| || |||||||||||| |||||||| ||||||    
T  19228522 taatacaaaaaacacaagttccaagtcaaagttactactttaaacttcttaacatgtgcaaatttgcacatga 19228594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 5 - 120
Target Start/End: Complemental strand, 36612909 - 36612796
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttatt-gaaaataacagttatttgttaaaaagttacactatatt 103  Q
    |||||| |||||||||||| ||| |  ||||||||| |||||| | || ||||||||| || ||||| |||| |||||| || |||||||    ||||||    
T  36612909 gtttgtctaacatgtgcaacattgctcatgttaaaataactaatagtagtaacttttttttggaaaacaacatttatttattcaaaagtt---ttatatt 36612813  T
Q  104 taatataaaatgtacaa 120  Q
    |||||| ||||||||||    
T  36612812 taatattaaatgtacaa 36612796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 5 - 120
Target Start/End: Complemental strand, 36620760 - 36620647
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttatt-gaaaataacagttatttgttaaaaagttacactatatt 103  Q
    |||||| |||||||||||| ||| |  ||||||||| |||||| | || ||||||||| || ||||| |||| |||||| || |||||||    ||||||    
T  36620760 gtttgtctaacatgtgcaacattgctcatgttaaaataactaatagtagtaacttttttttggaaaacaacatttatttattcaaaagtt---ttatatt 36620664  T
Q  104 taatataaaatgtacaa 120  Q
    |||||| ||||||||||    
T  36620663 taatattaaatgtacaa 36620647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 5 - 55
Target Start/End: Complemental strand, 36909553 - 36909503
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaata 55  Q
    |||||| |||||| |||||||||||| |||||||||||| ||||| |||||    
T  36909553 gtttgtctaacatatgcaatattacacatgttaaaacaattaaaagtaata 36909503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 5 - 71
Target Start/End: Complemental strand, 39904225 - 39904159
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaat 71  Q
    |||||| |||||||||||||||| || |||||||   |||||||| || |||||||| |||||||||    
T  39904225 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaat 39904159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 4579966 - 4579901
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa 70  Q
    |||||| ||||||||||||||||||| |||||||   |||||||  || |||||||| ||||||||    
T  4579966 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaatatagtaacttttcattgaaaa 4579901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 62
Target Start/End: Original strand, 16754971 - 16755028
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataacttttt 62  Q
    |||||| |||||||||||| ||| || |||||||||||||||| | || |||||||||    
T  16754971 gtttgtctaacatgtgcaacattgcaaatgttaaaacaactaatagtagtaacttttt 16755028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 16919331 - 16919266
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa 70  Q
    |||||| |||||||||||||||| || |||||||   |||||||| || ||||||||| |||||||    
T  16919331 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaa 16919266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 70
Target Start/End: Original strand, 22705455 - 22705520
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa 70  Q
    |||||| |||||||||||||||| || |||||||   |||||||| || |||||||| ||||||||    
T  22705455 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaa 22705520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 26003669 - 26003612
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataacttttt 62  Q
    |||||| |||||||||||| ||| || |||||||||||||||| | || |||||||||    
T  26003669 gtttgtctaacatgtgcaacattgcacatgttaaaacaactaatagtagtaacttttt 26003612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 25998172 - 25998088
Alignment:
Q  13 aacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattg-aaaataacagttatttgttaaaaagttaca 96  Q
    |||||||||| |||| || ||||||||  |||||||| | | |||||||||||| |||| |||| |||||| |||||||| ||||    
T  25998172 aacatgtgcattattgcacatgttaaagtaactaaaagtgaaaactttttattgaaaaacaacaattatttattaaaaagataca 25998088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 5 - 175
Target Start/End: Complemental strand, 26230030 - 26229864
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatattt 104  Q
    |||||| |||||||||||||||| || |||||||   |||||||| || ||| |||||||| |||  |||| ||| ||| | |||||||||   ||||||    
T  26230030 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaattttttattaaaaccaacaatta-ttgattaaaagttac---atattt 26229935  T
Q  105 aatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatg 175  Q
    |||||||||  || ||||   || ||||| |||| ||||| || |||||||| ||  |||||||| |||||    
T  26229934 aatataaaaaatataaattttaagtcaaagttactattttaaacttcttaacctggacaaatttgcacatg 26229864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 47; Significance: 2e-17; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 5 - 176
Target Start/End: Original strand, 6016856 - 6017025
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaat-aacagttatttgttaaaaagttacactatatt 103  Q
    |||||| |||||||||||| ||| || ||| ||| ||| |||||| || |||||||| ||||||||  |||| |||||| |||||||||||   ||||||    
T  6016856 gtttgtctaacatgtgcaacattgcacatggtaagacatctaaaagtagtaacttttcattgaaaaacaacacttattttttaaaaagtta---tatatt 6016952  T
Q  104 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 176  Q
    |||||| ||||| |||| |  ||| ||||| |||||| ||| || || ||||||||| |||||||| ||||||    
T  6016953 taatatgaaatgcacaagttccaagtcaaagttaccactttaaactttttaacatgtgcaaatttgcacatga 6017025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 5 - 158
Target Start/End: Original strand, 30623326 - 30623477
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattg-aaaataacagttatttgttaaaaagttacactatatt 103  Q
    |||||| |||||||||||| |||||| |||||||||||||||| | || ||||||||| ||| |||| |||| |||||| || |||||||    ||||||    
T  30623326 gtttgtctaacatgtgcaacattacacatgttaaaacaactaatagtagtaactttttcttgaaaaacaacaattatttattcaaaagtt---ttatatt 30623422  T
Q  104 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacat 158  Q
    |||||| |||||||||| |  |||| |||| || | ||||| || ||||||||||    
T  30623423 taatatcaaatgtacaagtttcaatacaaaatttctattttaaacttcttaacat 30623477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 5 - 168
Target Start/End: Complemental strand, 8977644 - 8977483
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaat-aacagttatttgttaaaaagttacactatatt 103  Q
    |||||| |||||||||||||||| || |||||||   |||||||| ||  ||| ||| ||||||||  |||| | |||| || ||||||||||   ||||    
T  8977644 gtttgtctaacatgtgcaatattgcacatgttaaggaaactaaaagtagcaacctttaattgaaaaacaacaatcatttattgaaaagttaca---tatt 8977548  T
Q  104 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaattt 168  Q
    |||||||||||| |||| |  |||| ||||||||| |||||||| ||||||||| || |||||||    
T  8977547 taatataaaatgcacaagttacaatacaaatttactattttgaacttcttaacaagtgcaaattt 8977483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 5 - 176
Target Start/End: Original strand, 34692354 - 34692523
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattg-aaaataacagttatttgttaaaaagttacactatatt 103  Q
    |||||| |||||||||||| ||| || |||||||||||||||| | || ||||||||| ||| ||||  | | |||||| || |||||||    ||||||    
T  34692354 gtttgtctaacatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaactataattatttatttaaaagttt---tatatt 34692450  T
Q  104 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 176  Q
    |||||| |||||||||| |  |||| |||| || | ||||| || |||||||||||| |||||||| ||||||    
T  34692451 taatattaaatgtacaagttccaatacaaaatttctattttaaacttcttaacatgtgcaaatttgcacatga 34692523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 176
Target Start/End: Complemental strand, 14228303 - 14228135
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatattt 104  Q
    |||||| |||||||||||||||| || |||||||   || ||||| ||  || ||||||||||||  |||| ||||||   |||||||||   |||||||    
T  14228303 gtttgtctaacatgtgcaatattgcacatgttaaggtaattaaaagtagcaagtttttattgaaaccaacaattatttaacaaaaagtta---tatattt 14228207  T
Q  105 aatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 176  Q
    |||| ||||||| ||| |  |||| |||| |||| ||||| || |||||||||||| |||||||| ||||||    
T  14228206 aatacaaaatgttcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaatttgcacatga 14228135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 176
Target Start/End: Complemental strand, 28943946 - 28943778
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatattt 104  Q
    |||||| |||||||||||||||| || |||||||   || ||||| ||  || ||||||||||||  |||| ||||||   |||||||||   |||||||    
T  28943946 gtttgtctaacatgtgcaatattgcacatgttaaggtaattaaaagtagcaagtttttattgaaaccaacaattatttaacaaaaagtta---tatattt 28943850  T
Q  105 aatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 176  Q
    |||| ||||||| ||| |  |||| |||| |||| ||||| || |||||||||||| |||||||| ||||||    
T  28943849 aatacaaaatgttcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaatttgcacatga 28943778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 112
Target Start/End: Original strand, 29730295 - 29730383
Alignment:
Q  22 aatattacatatgttaaaacaactaaaattaataactttttattg-aaaataacagttatttgttaaaaagttacactatatttaatataaa 112  Q
    |||||| ||||||||||| | | |||||||||||| ||||||||| |||| ||||||||||| |||||||||||   |||||||||||||||    
T  29730295 aatattgcatatgttaaagctattaaaattaataagtttttattgaaaaacaacagttatttattaaaaagtta---tatatttaatataaa 29730383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 7 - 176
Target Start/End: Original strand, 10887031 - 10887198
Alignment:
Q  7 ttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaat-aacagttatttgttaaaaagttacactatattta 105  Q
    |||| |||||||||||| ||| || ||||||| | | |||||| || ||| |||||||||||||  || | |||||| |||||||| ||||   ||||||    
T  10887031 ttgtctaacatgtgcaacattgcacatgttaagatatctaaaagtagtaattttttattgaaaaacaaaacttatttattaaaaagctaca---tattta 10887127  T
Q  106 atataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 176  Q
    |||||||||  |||| |  ||| ||||| |||||| ||| || |||||||||||| |||||||| ||||||    
T  10887128 atataaaatacacaagttccaaatcaaaattaccactttaaacttcttaacatgtgcaaatttgcacatga 10887198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 5 - 174
Target Start/End: Original strand, 33017725 - 33017891
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatattt 104  Q
    |||||| |||||||||||||||| || |||||||   |||||||||||  || |||||||| |||  |||| ||||||   |||||||||   |||||||    
T  33017725 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaattagcaagtttttattaaaaccaacaattatttaacaaaaagtta---tatattt 33017821  T
Q  105 aatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacat 174  Q
    |||| ||||||| ||| |  | || |||| |||| ||||| || || ||||||||| |||||||| ||||    
T  33017822 aatacaaaatgttcaagttcctatgcaaagttactattttaaattttttaacatgtgcaaatttgcacat 33017891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 160
Target Start/End: Complemental strand, 1017956 - 1017803
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaat-aacagttatttgttaaaaagttacactatatt 103  Q
    |||||| |||||||||||||| | || ||| | ||| |||||||| || ||||||||  |||||||  |||| |||||| ||||||| |||||   ||||    
T  1017956 gtttgtctaacatgtgcaatactgcacatgattaaataactaaaagtagtaacttttcgttgaaaaccaacaattatttattaaaaatttaca---tatt 1017860  T
Q  104 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgt 160  Q
    |||||||||||| |||| |  ||| ||||| |||| | ||| || ||||||||||||    
T  1017859 taatataaaatgcacaactttcaagtcaaagttactactttaaacttcttaacatgt 1017803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 176
Target Start/End: Complemental strand, 29863480 - 29863311
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattg-aaaataacagttatttgttaaaaagttacactatatt 103  Q
    |||||| |||||||||||||||| || ||||||||  |||||||| || |||||||  |||| |||| || | |||||| ||||||||||    |||| |    
T  29863480 gtttgtctaacatgtgcaatattgcacatgttaaaggaactaaaaatagtaactttacattgaaaaagaataattatttattaaaaagtt---ttatagt 29863384  T
Q  104 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 176  Q
    |||||||||||| | || |  | |  ||| ||||| ||||| || |||||||||||| |||||||| ||||||    
T  29863383 taatataaaatgcaaaagttccgacacaattttactattttaaacttcttaacatgtgcaaatttgcacatga 29863311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 1814959 - 1814894
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa 70  Q
    |||||| |||||||||||||||| || |||||||| ||||||||| ||| |  |||||||||||||    
T  1814959 gtttgtctaacatgtgcaatattgcacatgttaaagcaactaaaagtaacatatttttattgaaaa 1814894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 3485776 - 3485711
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa 70  Q
    |||||| |||||| || ||||||||||||||||||  |||||||||||  | ||||||||||||||    
T  3485776 gtttgtctaacatatgtaatattacatatgttaaaggaactaaaattagcacctttttattgaaaa 3485711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 176
Target Start/End: Complemental strand, 17552764 - 17552596
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatattt 104  Q
    |||||| |||||||||||||||| || |||||||   |||||||| ||  || ||||||| ||||  |||| ||||||   ||||| |||   |||||||    
T  17552764 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagcaagtttttatcgaaaccaacaattatttaacaaaaaatta---tatattt 17552668  T
Q  105 aatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 176  Q
    |||| ||||||| ||| |  |||| || | |||| ||||| || |||||||||||| |||||||| ||||||    
T  17552667 aatacaaaatgttcaagttccaatgcataattactattttaaatttcttaacatgtgcaaatttgcacatga 17552596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 24979327 - 24979262
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa 70  Q
    |||||| |||||||||||| ||| || |||||||||||||||| | || ||||||||| |||||||    
T  24979327 gtttgtctaacatgtgcaacattgcacatgttaaaacaactaataatagtaactttttcttgaaaa 24979262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 62
Target Start/End: Original strand, 17596315 - 17596370
Alignment:
Q  7 ttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataacttttt 62  Q
    |||| |||||||||||||||| || ||||||| |||||||||| || |||||||||    
T  17596315 ttgtctaacatgtgcaatattgcacatgttaagacaactaaaagtagtaacttttt 17596370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 5 - 176
Target Start/End: Complemental strand, 18332866 - 18332697
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattg-aaaataacagttatttgttaaaaagttacactatatt 103  Q
    |||||| |||||||||||| ||| || ||||||| | | |||||| || ||| ||||||||| |||| || | |||||| |||||||| ||   ||||||    
T  18332866 gtttgtctaacatgtgcaacattgcacatgttaagatatctaaaagtagtaattttttattgaaaaacaaaacttatttattaaaaagcta---tatatt 18332770  T
Q  104 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 176  Q
    |||||| ||||| | || |  ||| ||||| ||| || ||| || ||||||||||||  ||||||| ||||||    
T  18332769 taatatgaaatgcataagttccaagtcaaaattatcactttaaacttcttaacatgtgaaaatttgcacatga 18332697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 5363070 - 5363005
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa 70  Q
    |||||| |||||||||||||||| || |||||||   |||||||| || |||||||| ||||||||    
T  5363070 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaa 5363005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 46; Significance: 7e-17; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 5 - 176
Target Start/End: Original strand, 30839782 - 30839950
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatattt 104  Q
    |||||| |||||||||||||||| || |||||||   |||||||| ||  || ||||||||||||  |||| ||||||   |||||||||   |||||||    
T  30839782 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagcaagtttttattgaaaccaacaattatttaacaaaaagtta---tatattt 30839878  T
Q  105 aatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 176  Q
    |||| ||||||| ||| |  |||| |||| |||| ||||| || |||||||||||| |||||||| ||||||    
T  30839879 aatacaaaatgttcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaatttgcacatga 30839950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 5 - 176
Target Start/End: Original strand, 36597580 - 36597748
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatattt 104  Q
    |||||| |||||||||||||||| || |||||||   |||||||| ||  || ||||||||||||  |||| ||||||   |||||||||   |||||||    
T  36597580 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagcaaatttttattgaaaccaacaattatttaacaaaaagtta---tatattt 36597676  T
Q  105 aatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 176  Q
    |||| ||||||| ||| |  |||| |||| |||| ||||| || |||||||||||| |||||||| ||||||    
T  36597677 aatacaaaatgttcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaatttgcacatga 36597748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 7 - 176
Target Start/End: Complemental strand, 8103755 - 8103589
Alignment:
Q  7 ttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatatttaa 106  Q
    |||| |||||||||||||||| || |||||||  ||||||||| || ||||||||||||||||  |||| ||| || |||||||  |||   ||| ||||    
T  8103755 ttgtctaacatgtgcaatattgcacatgttaaggcaactaaaaatagtaactttttattgaaaccaacaattaattattaaaaatctac---ataattaa 8103659  T
Q  107 tataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 176  Q
    ||||||||| |||| |  ||| ||||| |||| | ||| || |||||| ||||| |||||||| ||||||    
T  8103658 tataaaatgcacaagttccaagtcaaagttactactttaaacttcttatcatgtgcaaatttgcacatga 8103589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 169
Target Start/End: Complemental strand, 18841883 - 18841721
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttatt-gaaaataacagttatttgttaaaaagttacactatatt 103  Q
    |||||| |||||||||||| ||| || |||||||||||||||| | || ||||||||| || ||||| |||| |||||| || |||||||    ||||||    
T  18841883 gtttgtctaacatgtgcaacattgcacatgttaaaacaactaatagtagtaacttttttttggaaaacaacaattatttattcaaaagtt---ttatatt 18841787  T
Q  104 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttg 169  Q
    |||||| ||||||||||||  |||| |||| || | ||||| || || ||||||| | ||||||||    
T  18841786 taatattaaatgtacaaatttcaatacaaaatttctattttaaactttttaacatatgcaaatttg 18841721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 5 - 176
Target Start/End: Original strand, 3398220 - 3398389
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattg-aaaataacagttatttgttaaaaagttacactatatt 103  Q
    |||||| |||||||||||| ||| || |||||||||||||||| | || ||||||||| ||| ||||  | | |||||| || |||||||    ||||||    
T  3398220 gtttgtctaacatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaactataattatttatttaaaagttt---tatatt 3398316  T
Q  104 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 176  Q
    |||||| |||||||||| |  |||| |||| || | ||||| || |||||||||||| |||||||| ||||||    
T  3398317 taatattaaatgtacaagttccaatacaaaatttctattttaaacttcttaacatgtgcaaatttgcacatga 3398389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 176
Target Start/End: Original strand, 40512952 - 40513120
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatattt 104  Q
    |||||| |||||||||||||||| || |||||||   ||||| || || ||| ||||||||||||  |||| ||||||   |||||||||   |||||||    
T  40512952 gtttgtctaacatgtgcaatattgcacatgttaaggtaactagaagtagtaagtttttattgaaatcaacaattatttaacaaaaagtta---tatattt 40513048  T
Q  105 aatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 176  Q
     ||| ||||| | |||||  |||| |||| |||| ||||| || || ||||||||| |||||||||||||||    
T  40513049 gatacaaaatattcaaattccaatgcaaagttactattttaaattttttaacatgtgcaaatttgtacatga 40513120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 112
Target Start/End: Complemental strand, 5958301 - 5958196
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaat-aacagttatttgttaaaaagttacactatatt 103  Q
    |||||| ||||||||||||||||||| ||||||||  |||||||| || ||| |||| ||||||||| |||| ||| || ||||||| ||||   |||||    
T  5958301 gtttgtctaacatgtgcaatattacacatgttaaagaaactaaaagtagtaatttttcattgaaaatcaacaattaattattaaaaatttac---atatt 5958205  T
Q  104 taatataaa 112  Q
    |||||||||    
T  5958204 taatataaa 5958196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 176
Target Start/End: Original strand, 11636732 - 11636900
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa-taacagttatttgttaaaaagttacactatatt 103  Q
    |||||| |||||||||||||||| || ||||||||  |||||||| || |||||||| ||||||||  |||| ||| || ||||||| ||||   |||||    
T  11636732 gtttgtctaacatgtgcaatattgcacatgttaaagaaactaaaagtagtaacttttcattgaaaaccaacaattaattattaaaaatttac---atatt 11636828  T
Q  104 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 176  Q
    |||||| ||||| |||| |  ||| ||||| |||| | ||| || |||||| ||||| |||||||| ||||||    
T  11636829 taatat-aaatgcacaagtttcaagtcaaagttactactttaaacttcttatcatgtgcaaatttgcacatga 11636900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 67 - 176
Target Start/End: Complemental strand, 15241065 - 15240959
Alignment:
Q  67 aaaataacagttatttgttaaaaagttacactatatttaatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaat 166  Q
    |||| |||| |||||| ||||||| |||   |||||||||||||| ||| ||||||  |||| ||||||||  |||||||| || ||||||||| |||||    
T  15241065 aaaacaacaattatttattaaaaaatta---tatatttaatataacatgcacaaatttcaatacaaatttaatattttgaactttttaacatgtacaaat 15240969  T
Q  167 ttgtacatga 176  Q
    ||| ||||||    
T  15240968 ttgcacatga 15240959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 94
Target Start/End: Complemental strand, 10665134 - 10665053
Alignment:
Q  13 aacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagtta 94  Q
    |||||||| |||||| || |||||||   |||||||| ||||||||||| ||||||||||  | |||||| |||||||||||    
T  10665134 aacatgtgtaatattgcacatgttaaggtaactaaaagtaataacttttcattgaaaatattaattatttattaaaaagtta 10665053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 62
Target Start/End: Original strand, 11360186 - 11360243
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataacttttt 62  Q
    |||| |||||||||| |||||||||| |||||||||||||||||| || ||| |||||    
T  11360186 gtttatttaacatgttcaatattacacatgttaaaacaactaaaagtagtaatttttt 11360243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 201 - 242
Target Start/End: Original strand, 20058109 - 20058150
Alignment:
Q  201 aacatcatcaaataaaattatctaatgaacatgaacaaaaca 242  Q
    |||||||||||||||||||||||||||||||| | |||||||    
T  20058109 aacatcatcaaataaaattatctaatgaacatcatcaaaaca 20058150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 5 - 49
Target Start/End: Complemental strand, 11250134 - 11250090
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaa 49  Q
    ||||||||||||||||||||||| || |||||||| |||||||||    
T  11250134 gtttgtttaacatgtgcaatattgcacatgttaaagcaactaaaa 11250090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 16 - 113
Target Start/End: Original strand, 28629890 - 28629984
Alignment:
Q  16 atgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa-taacagttatttgttaaaaagttacactatatttaatataaaa 113  Q
    |||| ||||||| || |||||||| ||||||||| ||||||||||| ||||||||  |||| |||||| || |||||||||   |||||||||||||||    
T  28629890 atgtacaatattgcacatgttaaagcaactaaaaataataacttttcattgaaaaccaacaattatttatt-aaaagttac---atatttaatataaaa 28629984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 5 - 49
Target Start/End: Original strand, 33072677 - 33072721
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaa 49  Q
    ||||||||||||||||||||||| || |||||||| |||||||||    
T  33072677 gtttgtttaacatgtgcaatattgcacatgttaaatcaactaaaa 33072721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 5 - 176
Target Start/End: Original strand, 2795524 - 2795692
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa-taacagttatttgttaaaaagttacactatatt 103  Q
    |||||| |||||||||||||||| || |||||||   |||||||| || |||||||| ||||||||  |||| ||| ||| | |||||||||   |||||    
T  2795524 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaaccaacaatta-ttgattaaaagttac---atatt 2795619  T
Q  104 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 176  Q
    ||||| ||||   |||| |  ||| ||||| |||| | ||| || |||||||||||| |||||||| ||||||    
T  2795620 taatacaaaaaacacaagttccaagtcaaagttactactttaaacttcttaacatgtgcaaatttgcacatga 2795692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 17 - 71
Target Start/End: Original strand, 11375972 - 11376026
Alignment:
Q  17 tgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaat 71  Q
    ||||||||||| || |||||||| ||||||||| || |||||||| |||||||||    
T  11375972 tgtgcaatattgcacatgttaaagcaactaaaagtagtaacttttcattgaaaat 11376026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 98 - 160
Target Start/End: Original strand, 15820317 - 15820379
Alignment:
Q  98 tatatttaatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgt 160  Q
    ||||||||||| ||||||| |||||  |||| ||||||||| |||||||| ||||| ||||||    
T  15820317 tatatttaatagaaaatgttcaaatttcaatacaaatttactattttgaatttcttgacatgt 15820379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 84 - 174
Target Start/End: Complemental strand, 23995516 - 23995427
Alignment:
Q  84 ttaaaaagttacactatatttaatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacat 174  Q
    ||||||||||| | ||||||||||| ||||||||||| |  ||||  ||| |||| ||||| || |||||||||||| |||||||| ||||    
T  23995516 ttaaaaagttata-tatatttaatacaaaatgtacaagtttcaatataaaattactattttaaacttcttaacatgtacaaatttgcacat 23995427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 99 - 169
Target Start/End: Complemental strand, 31567577 - 31567507
Alignment:
Q  99 atatttaatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttg 169  Q
    ||||||||||||||||| ||||||  |||  |||| |||||||||| || || ||||||||| ||||||||    
T  31567577 atatttaatataaaatgaacaaatttcaagacaaaattaccattttaaattttttaacatgtgcaaatttg 31567507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 34578012 - 34578078
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaat 71  Q
    |||||| |||||||||||||||| || |||||||   |||||||| |||||| |||| |||||||||    
T  34578012 gtttgtctaacatgtgcaatattccacatgttaaggtaactaaaagtaataatttttcattgaaaat 34578078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 32 - 115
Target Start/End: Complemental strand, 40309580 - 40309497
Alignment:
Q  32 atgttaaaacaactaaaattaataactttttattg---aaaataacagttatttgttaaaaagttacactatatttaatataaaatg 115  Q
    |||||||||||||||||| ||| ||  ||||||||   ||||||||| | |||| |||||||||||   ||||||||||||||||||    
T  40309580 atgttaaaacaactaaaagtaacaatattttattgaaaaaaataacaataatttattaaaaagtta---tatatttaatataaaatg 40309497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 24014865 - 24014800
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa 70  Q
    |||||| |||||||||||| ||| || |||||||||||||||||| ||  || |||||||| ||||    
T  24014865 gtttgtctaacatgtgcaacattgcacatgttaaaacaactaaaagtataaagtttttattcaaaa 24014800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 58 - 176
Target Start/End: Original strand, 6863610 - 6863725
Alignment:
Q  58 tttttattgaaaataacagttatttgttaaaaagttacactatatttaatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaaca 157  Q
    ||||||||||||  |||| ||||||  ||||||||||   ||||||||||| ||||||| ||| |  ||||  ||| |||| ||||| || || ||||||    
T  6863610 tttttattgaaaccaacaattatttaataaaaagtta---tatatttaatacaaaatgttcaagttccaatataaagttactattttaaattttttaaca 6863706  T
Q  158 tgttcaaatttgtacatga 176  Q
    ||| |||||||| ||||||    
T  6863707 tgtgcaaatttgcacatga 6863725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 100 - 176
Target Start/End: Original strand, 7162934 - 7163010
Alignment:
Q  100 tatttaatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 176  Q
    |||||||||||||||| |||| |  ||||||||| |||| ||||| |||||||||| |  | || ||||||||||||    
T  7162934 tatttaatataaaatgaacaagtttcaattcaaacttactattttaaaattcttaaaaaatacatatttgtacatga 7163010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 193 - 225
Target Start/End: Original strand, 24015674 - 24015706
Alignment:
Q  193 aacaataaaacatcatcaaataaaattatctaa 225  Q
    ||||||||||||||||||||||||| |||||||    
T  24015674 aacaataaaacatcatcaaataaaactatctaa 24015706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 46; Significance: 7e-17; HSPs: 31)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 5 - 176
Target Start/End: Original strand, 2571269 - 2571437
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatattt 104  Q
    |||||| |||||||||||||||| || |||||||   |||||||| ||  || ||||||||||||  |||| ||||||   |||||||||   |||||||    
T  2571269 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagcaagtttttattgaaaccaacaattatttaacaaaaagtta---tatattt 2571365  T
Q  105 aatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 176  Q
    |||| ||||||| ||| |  |||| |||| |||| ||||| || |||||||||||| |||||||| ||||||    
T  2571366 aatacaaaatgttcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaatttgcacatga 2571437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 5 - 176
Target Start/End: Original strand, 10307767 - 10307935
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatattt 104  Q
    |||||| |||||||||||||||| || ||| |||   |||||||| ||  || ||||||||||||  |||| ||||||   |||||||||   |||||||    
T  10307767 gtttgtctaacatgtgcaatattgcacatgataaggtaactaaaagtagcaaatttttattgaaaccaacaattatttaacaaaaagtta---tatattt 10307863  T
Q  105 aatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 176  Q
    |||| ||||||| ||| |  |||| ||||||||| ||||| || |||||||||||| |||||||| ||||||    
T  10307864 aatacaaaatgttcaagttccaatgcaaatttactattttaaatttcttaacatgtgcaaatttgcacatga 10307935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 5 - 174
Target Start/End: Complemental strand, 54527884 - 54527717
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttatt-gaaaataacagttatttgttaaaaagttacactatatt 103  Q
    |||||| |||||||||||| ||| || |||||||||||||||| | || ||||||||| || ||||| |||| |||||| || |||||||    ||||||    
T  54527884 gtttgtctaacatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaacaacaattatttattcaaaagtt---ttatatt 54527788  T
Q  104 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacat 174  Q
    |||||| |||||||||| |  |||| |||| ||   ||||| || |||||||||||| |||||||| ||||    
T  54527787 taatattaaatgtacaagttccaatacaaaatttatattttaaatttcttaacatgtgcaaatttgcacat 54527717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 5 - 176
Target Start/End: Original strand, 38389447 - 38389616
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaat-aacagttatttgttaaaaagttacactatatt 103  Q
    |||||| |||||||||||| ||| || ||||||| | | |||||| || ||| |||||||||||||  || | |||||| |||||||| ||||   ||||    
T  38389447 gtttgtctaacatgtgcaacattgcacatgttaagatatctaaaagtagtaattttttattgaaaaacaaaacttatttattaaaaagctaca---tatt 38389543  T
Q  104 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 176  Q
    |||||| ||||| |||| |  ||| ||||| |||||| ||| || |||||||||||| |||||||| ||||||    
T  38389544 taatatgaaatgcacaagttccaagtcaaaattaccactttaaacttcttaacatgtgcaaatttgcacatga 38389616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 5 - 176
Target Start/End: Original strand, 50204403 - 50204572
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttatt-gaaaataacagttatttgttaaaaagttacactatatt 103  Q
    |||||| |||||||||||| ||| || |||||||||||||||| | || ||| ||||| || |||||||||| |||| | || |||||||    ||||||    
T  50204403 gtttgtctaacatgtgcaacattgcacatgttaaaacaactaatagtagtaattttttcttggaaaataacaattatatattcaaaagtt---ttatatt 50204499  T
Q  104 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 176  Q
    |||||| |||||||||  |  |||| |||| || | ||||| || |||||||||||| |||||||| ||||||    
T  50204500 taatattaaatgtacaggttccaatacaaaatttctattttaaacttcttaacatgtgcaaatttgcacatga 50204572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 4 - 113
Target Start/End: Original strand, 20938056 - 20938162
Alignment:
Q  4 tgtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa-taacagttatttgttaaaaagttacactatat 102  Q
    ||||||| |||||||||||||||| || |||||||   |||||||| |||||||||||||||||||| ||||| |||||  ||||||| ||||   ||||    
T  20938056 tgtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtaataactttttattgaaaactaacaattattgattaaaaa-ttac---atat 20938151  T
Q  103 ttaatataaaa 113  Q
    |||||||||||    
T  20938152 ttaatataaaa 20938162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 7 - 176
Target Start/End: Complemental strand, 46492519 - 46492352
Alignment:
Q  7 ttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattg-aaaataacagttatttgttaaaaagttacactatattta 105  Q
    |||||||| |||||||||||| || |||||||| ||||||||| |  ||| ||||||||| |||| |||| |||||| ||||  |||||   ||||||||    
T  46492519 ttgtttaaaatgtgcaatattgcacatgttaaagcaactaaaagtggtaagtttttattgaaaaacaacaattatttattaacgagtta---tatattta 46492423  T
Q  106 atataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 176  Q
    ||| ||||||||||| |  |||| |||| |||| | ||| || |||||||| |||  ||||||| ||||||    
T  46492422 atacaaaatgtacaagtttcaatgcaaagttactactttaaatttcttaacgtgtgaaaatttgcacatga 46492352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 5 - 176
Target Start/End: Original strand, 51618050 - 51618216
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattg-aaaataacagttatttgttaaaaagttacactatatt 103  Q
    |||||| |||||||||||||||| || ||||||||||||||||||  |  || |||||| || |||| |||| |||||| ||||||   ||   ||||||    
T  51618050 gtttgtctaacatgtgcaatattgcacatgttaaaacaactaaaagcagcaagtttttactgaaaaacaacaattatttattaaaa---ta---tatatt 51618143  T
Q  104 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 176  Q
    ||||| ||||||||||| |  |||| |||| |||| ||||  || |||||||||||| |||||||| ||||||    
T  51618144 taatacaaaatgtacaagttccaatgcaaagttacaatttgaaacttcttaacatgtgcaaatttgcacatga 51618216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 22 - 115
Target Start/End: Original strand, 53794781 - 53794872
Alignment:
Q  22 aatattacatatgttaaaacaactaaaattaataactttttattgaaaa-taacagttatttgttaaaaagttacactatatttaatataaaatg 115  Q
    |||||| || |||||||| ||||||||| |||||||| ||||||||||| ||||| | |||| ||||||||||||   |||||||||||||||||    
T  53794781 aatattgcacatgttaaaccaactaaaaataataactatttattgaaaagtaacaataatttattaaaaagttac---atatttaatataaaatg 53794872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 14 - 92
Target Start/End: Complemental strand, 2379238 - 2379162
Alignment:
Q  14 acatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagt 92  Q
    |||||||||||||| || |||||||||||||||||| || ||| |||||||||  ||||||| |||||| |||||||||    
T  2379238 acatgtgcaatattgcacatgttaaaacaactaaaagtagtaagtttttattg--aataacaattatttattaaaaagt 2379162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 37 - 166
Target Start/End: Complemental strand, 38786468 - 38786343
Alignment:
Q  37 aaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatatttaatataaaatgtacaaatagcaattcaaattt 136  Q
    ||||||||||||| || ||| |||||||||||||||||| |||||| |||||||  |||||   ||||| ||||||||  ||||||  ||| ||||| ||    
T  38786468 aaaacaactaaaaatagtaattttttattgaaaataacaattatttattaaaaa-atacac---atttagtataaaatccacaaatttcaaatcaaaatt 38786373  T
Q  137 accattttgaaattcttaacatgttcaaat 166  Q
    || ||||| || |||||||||||| |||||    
T  38786372 actattttaaacttcttaacatgtgcaaat 38786343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 176
Target Start/End: Original strand, 11610915 - 11611083
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa-taacagttatttgttaaaaagttacactatatt 103  Q
    |||||| |||||||||||||||| || |||||||  ||||||||| || |||||||| ||||||||  |||| |||||| || |||||||||   |||||    
T  11610915 gtttgtctaacatgtgcaatattgcacatgttaaggcaactaaaagtagtaacttttcattgaaaaccaacaattatttatt-aaaagttac---atatt 11611010  T
Q  104 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 176  Q
    ||||||||||   |||| |  ||| ||||| |||| | ||| || |||||| ||||| |||||||| ||||||    
T  11611011 taatataaaaaacacaagttccaagtcaaagttactactttaaacttcttatcatgtgcaaatttgcacatga 11611083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 95
Target Start/End: Complemental strand, 24569408 - 24569324
Alignment:
Q  12 taacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattg-aaaataacagttatttgttaaaaagttac 95  Q
    ||||||||||||||||  | ||||||| ||||||| || |||||||||||||||| |||| | || |||||| ||||||||||||    
T  24569408 taacatgtgcaatattggacatgttaagacaactacaaataataactttttattgaaaaacatcaattatttattaaaaagttac 24569324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 7 - 90
Target Start/End: Original strand, 37444149 - 37444232
Alignment:
Q  7 ttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaa 90  Q
    |||| |||||||||||||||| || |||||||  ||||||||| || ||||||||||||||||  |||| ||| || |||||||    
T  37444149 ttgtctaacatgtgcaatattgcacatgttaaggcaactaaaagtagtaactttttattgaaatcaacaattaattattaaaaa 37444232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 4 - 91
Target Start/End: Complemental strand, 40330468 - 40330381
Alignment:
Q  4 tgtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaag 91  Q
    |||||||||||||| ||||| |||||  ||| |||||||| ||||| || |||||||| |||||||| |||| | |||| ||||||||    
T  40330468 tgtttgtttaacatatgcaacattacgcatgataaaacaattaaaaatagtaacttttaattgaaaacaacaataatttattaaaaag 40330381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 168
Target Start/End: Original strand, 13495294 - 13495455
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaat-aacagttatttgttaaaaagttacactatatt 103  Q
    |||||| ||||||||||||  || || |||||||   |||||||| || ||| |||||||||||||| |||| |||||| |||||||  |||   |||||    
T  13495294 gtttgtctaacatgtgcaaatttgcacatgttaaggtaactaaaagtagtaattttttattgaaaatcaacaattatttattaaaaacctac---atatt 13495390  T
Q  104 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaattt 168  Q
    |||||||||||| |||| |  ||| ||||| |||| | ||| || |||||| ||||| |||||||    
T  13495391 taatataaaatgcacaagttccaagtcaaaattactactttaaacttcttatcatgtgcaaattt 13495455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 168
Target Start/End: Original strand, 42180052 - 42180213
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttatt-gaaaataacagttatttgttaaaaagttacactatatt 103  Q
    |||||| |||||||||||| ||| || |||||||||||||||| | || ||||||||| || |||||  | | |||||| || |||||||    ||||||    
T  42180052 gtttgtctaacatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaactataattatttatttaaaagtt---ttatatt 42180148  T
Q  104 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaattt 168  Q
    |||||| |||||||||| |  |||| |||| ||   ||||| || |||||||||||| |||||||    
T  42180149 taatattaaatgtacaagttccaatacaaaatttttattttaaacttcttaacatgtgcaaattt 42180213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 93
Target Start/End: Complemental strand, 37055544 - 37055455
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattg-aaaataacagttatttgttaaaaagtt 93  Q
    |||||| |||||||| ||||||| |||||||||||  |||||||| || |||||||  |||| |||| |||| |||||| ||||||||||    
T  37055544 gtttgtctaacatgtacaatattgcatatgttaaaggaactaaaaatagtaactttacattgaaaaagaacaattatttattaaaaagtt 37055455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 5 - 94
Target Start/End: Original strand, 47386922 - 47387013
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattg--aaaataacagttatttgttaaaaagtta 94  Q
    |||||| |||||||||||||||| |  || ||||| ||||||||| || ||| |||||||||  |||| |||| |||||| |||||||||||    
T  47386922 gtttgtctaacatgtgcaatattgcgcatattaaagcaactaaaagtagtaagtttttattgaaaaaaaaacaattatttattaaaaagtta 47387013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 98 - 174
Target Start/End: Original strand, 51401531 - 51401607
Alignment:
Q  98 tatatttaatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacat 174  Q
    |||||||||||| |||||||||| |  |||| |||| || | ||||| || |||||||||||| |||||||||||||    
T  51401531 tatatttaatattaaatgtacaagttccaatacaaaatttctattttaaacttcttaacatgtgcaaatttgtacat 51401607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 56
Target Start/End: Complemental strand, 8497601 - 8497550
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataa 56  Q
    |||| |||||||||||||| ||| || |||||||||||||||||| ||||||    
T  8497601 gtttatttaacatgtgcaacattgcacatgttaaaacaactaaaagtaataa 8497550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 176
Target Start/End: Original strand, 45983516 - 45983675
Alignment:
Q  12 taacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatatttaatataa 111  Q
    |||||||||||| |||||||  |||||||||| ||| | || ||||||||| ||   || |||| ||||||||| |||||| |   |||||||||||| |    
T  45983516 taacatgtgcaacattacat--gttaaaacaattaatagtagtaacttttttttttgaaaaacaattatttgttcaaaagtaa---tatatttaatatta 45983610  T
Q  112 aatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 176  Q
    ||||||||| |  ||||  ||| || | ||||| || |||||||| ||| |||||||| ||||||    
T  45983611 aatgtacaagtttcaatataaaatttctattttaaacttcttaacctgtgcaaatttgcacatga 45983675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 91
Target Start/End: Complemental strand, 46845618 - 46845531
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaat-aacagttatttgttaaaaag 91  Q
    |||||| ||| |||||||||||| || || ||||| ||||||||| ||  || |||||||||||||| |||| |||||| ||||||||    
T  46845618 gtttgtctaatatgtgcaatattgcacatcttaaagcaactaaaagtagaaattttttattgaaaatcaacaattatttattaaaaag 46845531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 16 - 90
Target Start/End: Complemental strand, 13879973 - 13879899
Alignment:
Q  16 atgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaa 90  Q
    ||||||||||||||| || |||||| |||| ||| | | ||||||||||||||||  ||| |||||| |||||||    
T  13879973 atgtgcaatattacacatcttaaaataactgaaagtgaaaactttttattgaaaaccacaattatttattaaaaa 13879899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 130 - 176
Target Start/End: Original strand, 25633121 - 25633167
Alignment:
Q  130 caaatttaccattttgaaattcttaacatgttcaaatttgtacatga 176  Q
    ||||||||| |||||||| ||||||||| ||||||||||| ||||||    
T  25633121 caaatttactattttgaacttcttaacaagttcaaatttgcacatga 25633167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 4 - 70
Target Start/End: Complemental strand, 26200799 - 26200733
Alignment:
Q  4 tgtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa 70  Q
    ||||||| |||||| ||||||||| ||||||||||| ||||||  | || |||||||||| ||||||    
T  26200799 tgtttgtataacatttgcaatattgcatatgttaaagcaactaggagtagtaactttttactgaaaa 26200733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 168
Target Start/End: Complemental strand, 12515651 - 12515491
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatattt 104  Q
    |||||| |||||||||||||||| || |||||||   |||||||| ||  || |||||||| |||  |||| ||||||   |||||||||   |||||||    
T  12515651 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagcaagtttttattaaaaccaacaattatttaacaaaaagtta---tatattt 12515555  T
Q  105 aatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaattt 168  Q
    |||| ||||||| ||| |  | || |||| |||| ||||| || || ||||||||| |||||||    
T  12515554 aatacaaaatgttcaagttcctatgcaaagttactattttaaattttttaacatgtgcaaattt 12515491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 99 - 176
Target Start/End: Original strand, 23523038 - 23523115
Alignment:
Q  99 atatttaatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 176  Q
    ||||||||||| ||||| |||| |  ||| ||||| |||||| ||| || |||||||||||| |||||||| ||||||    
T  23523038 atatttaatatgaaatgcacaagttccaagtcaaaattaccactttaaacttcttaacatgtgcaaatttgcacatga 23523115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 89
Target Start/End: Complemental strand, 30214187 - 30214103
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaat-aacagttatttgttaaaa 89  Q
    |||||| ||||||||||||||||||| ||  |||  ||||||||| || |||||||| ||||||||| |||| |||||| ||||||    
T  30214187 gtttgtctaacatgtgcaatattacacattctaaggcaactaaaa-tagtaacttttcattgaaaatcaacaattatttattaaaa 30214103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 32321899 - 32321835
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa 70  Q
    |||||| ||||||||| |||||| |||||||||||| |||||||| ||  ||| ||||||||||||    
T  32321899 gtttgtataacatgtgtaatattgcatatgttaaaagaactaaaaatatcaac-ttttattgaaaa 32321835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 98 - 175
Target Start/End: Original strand, 49396471 - 49396548
Alignment:
Q  98 tatatttaatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatg 175  Q
    |||||||||||||||||| | ||||   ||||||||||||| | ||| || ||||||| |||| |||||||| |||||    
T  49396471 tatatttaatataaaatgcataaattttaattcaaatttactactttaaacttcttaatatgtacaaatttgcacatg 49396548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 176
Target Start/End: Complemental strand, 37292 - 37123
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaat-aacagttatttgttaaaaagttacactatatt 103  Q
    |||||| |||||||||||| ||| || ||||||| | | |||||| || ||| |||||||||||||  || | |||||| |||||||| ||||   ||||    
T  37292 gtttgtctaacatgtgcaacattgcacatgttaagatatctaaaagtagtaattttttattgaaaaacaaaacttatttattaaaaagctaca---tatt 37196  T
Q  104 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 176  Q
    |||||| ||||| |||| |  ||| ||||| ||| || ||| || |||||||||||| |||||||| ||||||    
T  37195 taatatgaaatgcacaagttccaagtcaaagttatcactttaaacttcttaacatgtgcaaatttgcacatga 37123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0631 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0631
Description:

Target: scaffold0631; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 49
Target Start/End: Original strand, 443 - 486
Alignment:
Q  6 tttgtttaacatgtgcaatattacatatgttaaaacaactaaaa 49  Q
    |||||||||||||||||||||| || |||||||| |||||||||    
T  443 tttgtttaacatgtgcaatattgcacatgttaaatcaactaaaa 486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 120
Target Start/End: Complemental strand, 13829 - 13723
Alignment:
Q  12 taacatgtgcaatattacatatgttaaaacaactaaaattaataactttttatt-gaaaataacagttatttgttaaaaagttacactatatttaatata 110  Q
    |||||||||||| ||| || |||||||||||||||| | || ||||||||| || ||||| || |||||||| || |||||||    ||||||||||||     
T  13829 taacatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaacaaaagttatttatttaaaagtt---ttatatttaatatt 13733  T
Q  111 aaatgtacaa 120  Q
     |||||||||    
T  13732 taatgtacaa 13723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0618 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0618
Description:

Target: scaffold0618; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 32 - 90
Target Start/End: Complemental strand, 8564 - 8506
Alignment:
Q  32 atgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaa 90  Q
    ||||||||||||| |||| || ||| ||||||||||||| |||| |||||| |||||||    
T  8564 atgttaaaacaacgaaaagtattaattttttattgaaaacaacaattatttattaaaaa 8506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 5 - 176
Target Start/End: Complemental strand, 52956 - 52788
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa-taacagttatttgttaaaaagttacactatatt 103  Q
    |||||| |||||||||||||||| || |||||||   |||||||| || |||||||| ||||||||  |||| ||| ||| | |||||||||   |||||    
T  52956 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaaccaacaatta-ttgattaaaagttac---atatt 52861  T
Q  104 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 176  Q
    ||||| ||||   |||| |  ||| ||||| |||| | ||| || |||||||||||| |||||||| ||||||    
T  52860 taatacaaaaaacacaagttccaagtcaaagttactactttaaacttcttaacatgtgcaaatttgcacatga 52788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 6 - 117
Target Start/End: Complemental strand, 94195 - 94086
Alignment:
Q  6 tttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa-taacagttatttgttaaaaagttacactatattt 104  Q
    ||||| |||||| ||||| ||| || |||||||| ||||||||| || ||| ||||||||||||| ||| | |||||| |||||||   ||  |||||||    
T  94195 tttgtctaacatatgcaacattgcacatgttaaatcaactaaaagtagtaagtttttattgaaaactaataattatttattaaaaa---actatatattt 94099  T
Q  105 aatataaaatgta 117  Q
    |||| ||||||||    
T  94098 aatacaaaatgta 94086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 5 - 176
Target Start/End: Original strand, 145678 - 145846
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa-taacagttatttgttaaaaagttacactatatt 103  Q
    |||||| |||||||||||||||| || |||||||   |||||||| || |||||||| ||||||||  |||| ||| ||| | |||||||||   |||||    
T  145678 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaaccaacaatta-ttgattaaaagttac---atatt 145773  T
Q  104 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 176  Q
    ||||| ||||   |||| |  ||| ||||| |||| | ||| || |||||||||||| |||||||| ||||||    
T  145774 taatacaaaaaacacaagttccaagtcaaagttactactttaaacttcttaacatgtgcaaatttgcacatga 145846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 5 - 176
Target Start/End: Original strand, 13086 - 13254
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa-taacagttatttgttaaaaagttacactatatt 103  Q
    |||||| |||||||||||||||| ||||||||||   |||||||| || ||| |||| ||||||||  |||| ||  ||| | ||||| |||   |||||    
T  13086 gtttgtctaacatgtgcaatattgcatatgttaaggtaactaaaagtagtaatttttcattgaaaaccaacaatt-gttgattaaaagctac---atatt 13181  T
Q  104 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 176  Q
    ||||||||||   ||||||  ||| | ||| |||| ||||| || |||||||||||| |||||||| ||||||    
T  13182 taatataaaaaacacaaattccaaattaaagttactattttaaacttcttaacatgtgcaaatttgcacatga 13254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0305 (Bit Score: 29; Significance: 0.000001; HSPs: 1)
Name: scaffold0305
Description:

Target: scaffold0305; HSP #1
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 67 - 169
Target Start/End: Complemental strand, 18111 - 18012
Alignment:
Q  67 aaaataacagttatttgttaaaaagttacactatatttaatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaat 166  Q
    |||| |||| |||||| ||| |||||||   |||||||||||||||||||||||||  |||| ||||  ||| ||||||||  | |||||| || |||||    
T  18111 aaaacaacaattatttattagaaagtta---tatatttaatataaaatgtacaaattccaatacaaacatactattttgaacattttaacacgtgcaaat 18015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 29; Significance: 0.000001; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 5 - 49
Target Start/End: Original strand, 22460 - 22504
Alignment:
Q  5 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaa 49  Q
    |||| |||||||||||||||||| || |||||||| |||||||||    
T  22460 gtttctttaacatgtgcaatattgcacatgttaaatcaactaaaa 22504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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