View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8443_low_7 (Length: 508)

Name: NF8443_low_7
Description: NF8443
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8443_low_7
NF8443_low_7
[»] chr1 (2 HSPs)
chr1 (13-508)||(1976353-1976848)
chr1 (13-508)||(1983719-1984214)
[»] chr2 (4 HSPs)
chr2 (13-508)||(27161586-27162087)
chr2 (132-508)||(22910498-22910880)
chr2 (17-227)||(23720136-23720352)
chr2 (17-75)||(22910449-22910507)
[»] chr5 (1 HSPs)
chr5 (13-508)||(20956101-20956602)
[»] scaffold0313 (2 HSPs)
scaffold0313 (13-506)||(3645-4144)
scaffold0313 (13-506)||(17802-18301)
[»] scaffold0764 (1 HSPs)
scaffold0764 (13-506)||(2468-2970)
[»] scaffold1531 (1 HSPs)
scaffold1531 (229-508)||(1408-1685)
[»] scaffold0059 (2 HSPs)
scaffold0059 (295-448)||(42511-42664)
scaffold0059 (98-155)||(42347-42404)


Alignment Details
Target: chr1 (Bit Score: 440; Significance: 0; HSPs: 2)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 440; E-Value: 0
Query Start/End: Original strand, 13 - 508
Target Start/End: Original strand, 1976353 - 1976848
Alignment:
Q  13 tcatcagagggaagtgatcctgatgcttgaggaataggatcagctgacatctcattctcttgaggcaagctaggttcagcagatgcatttgtctgaacat 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1976353 tcatcagagggaagtgatcctgatgcttgaggaataggatcagctgacatctcattctcttgaggcaagctaggttcagcagatgcatttgtctgaacat 1976452  T
Q  113 tctgagctgtgattgcaggattttcttgaagttcctgaatcatttcatgagcttgcacttcctcattgttttcaggctgtgcatcttggtacacattcaa 212  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||    
T  1976453 tctgaactgtgattgcaggattttcttgaagttcctgaatcatttcatgagcttgcacttcctcattgttttcaggttgtgcatcttggtacacatgcaa 1976552  T
Q  213 atctgtgcttggatcttccacatttagatcaaagccagtttgattttcagcttgctcaaaaccttgaggatccatttcatcatgtccctcactcattctt 312  Q
    ||||||||| |||||||||| |||||||||||||||||||||||| ||||||||||||||  ||||||||||||||||||| ||||||||||||||||||    
T  1976553 atctgtgctaggatcttccatatttagatcaaagccagtttgattatcagcttgctcaaactcttgaggatccatttcatcgtgtccctcactcattctt 1976652  T
Q  313 tgagagacaagaatttcagccacatcctgcatgtcttgatcattttcctgagatccttcttccacagcataagcaacttcttgagcagtttgctcagtat 412  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| | ||||| |||||||||||||||||||||||||||||||||    
T  1976653 tgagagacaaggatttcagccacatcctgcatgtcttgatcattttcctgagatccttataccacaacataagcaacttcttgagcagtttgctcagtat 1976752  T
Q  413 tttcttcaacttcattaactttctgaagttgttcagtaggaggagtatcaacattctgtacttcagcagcagcagttgagtcaacattctgaagtt 508  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  1976753 tttcttcaacttcattaactttctgaagttgttcagtaggaggagtatcaacattctgaacttcagcagcagcagttgagtcaacattctgaagtt 1976848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 420; E-Value: 0
Query Start/End: Original strand, 13 - 508
Target Start/End: Original strand, 1983719 - 1984214
Alignment:
Q  13 tcatcagagggaagtgatcctgatgcttgaggaataggatcagctgacatctcattctcttgaggcaagctaggttcagcagatgcatttgtctgaacat 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1983719 tcatcagagggaagtgatcctgatgcttgaggaataggatcagctgacatctcattctcttgaggcaagctaggttcagcagatgcatttgtctgaacat 1983818  T
Q  113 tctgagctgtgattgcaggattttcttgaagttcctgaatcatttcatgagcttgcacttcctcattgttttcaggctgtgcatcttggtacacattcaa 212  Q
    ||||| || ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||    
T  1983819 tctgaactatgattgcaggaatttcttgaagttcctgaatcatttcatgagcttgcacttcctcattgttttcaggttgtgcatcttggtacacatgcaa 1983918  T
Q  213 atctgtgcttggatcttccacatttagatcaaagccagtttgattttcagcttgctcaaaaccttgaggatccatttcatcatgtccctcactcattctt 312  Q
    ||||||||| |||||||||| |||||||||||||||||||||||| ||||||||||||||  ||||||||||||||||||| ||||||||||||||||||    
T  1983919 atctgtgctaggatcttccatatttagatcaaagccagtttgattatcagcttgctcaaactcttgaggatccatttcatcgtgtccctcactcattctt 1984018  T
Q  313 tgagagacaagaatttcagccacatcctgcatgtcttgatcattttcctgagatccttcttccacagcataagcaacttcttgagcagtttgctcagtat 412  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||||||||||||||||| |||||||||    
T  1984019 tgagagacaaggatttcagccacatcctgcatgtcttgatcattttcctgagatccttttgccacatcataagcaacttcttgagcagttggctcagtat 1984118  T
Q  413 tttcttcaacttcattaactttctgaagttgttcagtaggaggagtatcaacattctgtacttcagcagcagcagttgagtcaacattctgaagtt 508  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||||||||||||||    
T  1984119 tttcttcaacttcattaactttctgaagttgttcagtaggaggagtatcaacattctgaacttcagcagtatcagttgagtcaacattctgaagtt 1984214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 439; Significance: 0; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 439; E-Value: 0
Query Start/End: Original strand, 13 - 508
Target Start/End: Original strand, 27161586 - 27162087
Alignment:
Q  13 tcatcagagggaagtgatcctgatgcttgaggaataggatcagctgacatctcattctcttgaggcaagctaggttcagcagatgcatttgtctgaacat 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27161586 tcatcagagggaagtgatcctgatgcttgaggaataggatcagctgacatctcattctcttgaggcaagctaggttcagcagatgcatttgtctgaacat 27161685  T
Q  113 tctgagctgtgattgcaggattttcttgaagttcctgaatcatttcatgagctt------gcacttcctcattgttttcaggctgtgcatcttggtacac 206  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| |||||||      ||||||||||||||||||||||||||||||||||||||||    
T  27161686 tctgaactgtgattgcaggattttcttgaagttcctgaatcatttcgtgagcttcctgaagcacttcctcattgttttcaggctgtgcatcttggtacac 27161785  T
Q  207 attcaaatctgtgcttggatcttccacatttagatcaaagccagtttgattttcagcttgctcaaaaccttgaggatccatttcatcatgtccctcactc 306  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||||||||||||||||| ||||||    
T  27161786 attcacatctgagcttggatcttccacatttagatcaaagccagtttgattttcagcttgctcaaactcttgaggctccatttcatcatgtccatcactc 27161885  T
Q  307 attctttgagagacaagaatttcagccacatcctgcatgtcttgatcattttcctgagatccttcttccacagcataagcaacttcttgagcagtttgct 406  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27161886 attctttgagagacaagaatttcagccacatcttgcatgtcttgatcattttcctgagatccttcttccacagcataagcaacttcttgagcagtttgct 27161985  T
Q  407 cagtattttcttcaacttcattaactttctgaagttgttcagtaggaggagtatcaacattctgtacttcagcagcagcagttgagtcaacattctgaag 506  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  27161986 cagtattttcttcaacttcattaactttctgaagttgttcagtaggaggagtatcaacattctgaacttcagcagcagcagttgagtcaacattctgaag 27162085  T
Q  507 tt 508  Q
    ||    
T  27162086 tt 27162087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 132 - 508
Target Start/End: Original strand, 22910498 - 22910880
Alignment:
Q  132 attttcttgaagttcctgaatcatttcatgagcttgc------acttcctcattgttttcaggctgtgcatcttggtacacattcaaatctgtgcttgga 225  Q
    |||||||||||||||||||||||||| |||||||| |      |||||||||||||||||||| ||||||||||||||||||||||||| || |||||||    
T  22910498 attttcttgaagttcctgaatcatttaatgagcttcctgaaacacttcctcattgttttcaggttgtgcatcttggtacacattcaaatatgagcttgga 22910597  T
Q  226 tcttccacatttagatcaaagccagtttgattttcagcttgctcaaaaccttgaggatccatttcatcatgtccctcactcattctttgagagacaagaa 325  Q
    || |||||||||||||||||||||||||| ||||||||||||||||   |||||| ||||||||||||||||||||||||||| ||||||||||||||||    
T  22910598 tcctccacatttagatcaaagccagtttggttttcagcttgctcaatttcttgagaatccatttcatcatgtccctcactcatcctttgagagacaagaa 22910697  T
Q  326 tttcagccacatcctgcatgtcttgatcattttcctgagatccttcttccacagcataagca-acttcttgagcagtttgctcagtattttcttcaactt 424  Q
    ||||||| ||||| |||||||||||||||| ||||||||||||||||||  |||||| | || | |||||  || | || ||||| ||||||||||||||    
T  22910698 tttcagcaacatcatgcatgtcttgatcatcttcctgagatccttcttcagcagcatcaacatatttctt-tgctgctttctcagcattttcttcaactt 22910796  T
Q  425 cattaactttctgaagttgttcagtaggaggagtatcaacattctgtacttcagcagcagcagttgagtcaacattctgaagtt 508  Q
    ||| |||||||||||||||||||| ||| |    |  ||||||||| ||| ||||||||  |||||||||||| ||||||||||    
T  22910797 catcaactttctgaagttgttcagcaggtgagacagtaacattctgaactgcagcagcactagttgagtcaactttctgaagtt 22910880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 17 - 227
Target Start/End: Complemental strand, 23720352 - 23720136
Alignment:
Q  17 cagagggaagtgatcctgatgcttgaggaataggatcagctgacatctcattctcttgaggcaagctaggttcagcagatgcatttgtctgaacattctg 116  Q
    ||||||| || |||||||||||||||||||| || ||| ||||||| |||||||| |||||||||||||||||||||| ||||||| ||||| |||| ||    
T  23720352 cagagggcagagatcctgatgcttgaggaatggggtcaactgacatttcattctcctgaggcaagctaggttcagcagttgcatttttctgagcattatg 23720253  T
Q  117 agctgtgattgcaggattttcttgaagttcctgaatcatttcatgagctt------gcacttcctcattgttttcaggctgtgcatcttggtacacattc 210  Q
    | || |||||||||||||||||||||||| ||||||||||||| || |||      |||| ||||||||||||||||||||||||||||||||||||||     
T  23720252 aactatgattgcaggattttcttgaagtttctgaatcatttcacgatcttcctgaagcacatcctcattgttttcaggctgtgcatcttggtacacattt 23720153  T
Q  211 aaatctgtgcttggatc 227  Q
    ||||||| |||||||||    
T  23720152 aaatctgagcttggatc 23720136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 17 - 75
Target Start/End: Original strand, 22910449 - 22910507
Alignment:
Q  17 cagagggaagtgatcctgatgcttgaggaataggatcagctgacatctcattctcttga 75  Q
    ||||||| || |||||||||||||||||||| || ||| ||||||| ||||| ||||||    
T  22910449 cagagggcagagatcctgatgcttgaggaatggggtcaactgacatttcattttcttga 22910507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 435; Significance: 0; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 435; E-Value: 0
Query Start/End: Original strand, 13 - 508
Target Start/End: Complemental strand, 20956602 - 20956101
Alignment:
Q  13 tcatcagagggaagtgatcctgatgcttgaggaataggatcagctgacatctcattctcttgaggcaagctaggttcagcagatgcatttgtctgaacat 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20956602 tcatcagagggaagtgatcctgatgcttgaggaataggatcagctgacatctcattctcttgaggcaagctaggttcagcagatgcatttgtctgaacat 20956503  T
Q  113 tctgagctgtgattgcaggattttcttgaagttcctgaatcatttcatgagctt------gcacttcctcattgttttcaggctgtgcatcttggtacac 206  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| |||||||      ||||||||||||||||||||||||||||||||||||||||    
T  20956502 tctgaactgtgattgcaggattttcttgaagttcctgaatcatttcgtgagcttcctgaagcacttcctcattgttttcaggctgtgcatcttggtacac 20956403  T
Q  207 attcaaatctgtgcttggatcttccacatttagatcaaagccagtttgattttcagcttgctcaaaaccttgaggatccatttcatcatgtccctcactc 306  Q
    ||||| ||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  20956402 attcacatctgagcttggatcttccacatttagatcaaggccagtttgattttcagcttgctcaaaaccttgaggctccatttcatcatgtccatcactc 20956303  T
Q  307 attctttgagagacaagaatttcagccacatcctgcatgtcttgatcattttcctgagatccttcttccacagcataagcaacttcttgagcagtttgct 406  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20956302 attctttgagagacaagaatttcagccacatcttgcatgtcttgatcattttcctgagatccttcttccacagcataagcaacttcttgagcagtttgct 20956203  T
Q  407 cagtattttcttcaacttcattaactttctgaagttgttcagtaggaggagtatcaacattctgtacttcagcagcagcagttgagtcaacattctgaag 506  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| ||||||||||||||||||||||    
T  20956202 cagtattttcttcaacttcattaactttctgaagttgttcagtaggaggagtatcaacattctgaacttcaacagcaacagttgagtcaacattctgaag 20956103  T
Q  507 tt 508  Q
    ||    
T  20956102 tt 20956101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0313 (Bit Score: 393; Significance: 0; HSPs: 2)
Name: scaffold0313
Description:

Target: scaffold0313; HSP #1
Raw Score: 393; E-Value: 0
Query Start/End: Original strand, 13 - 506
Target Start/End: Complemental strand, 4144 - 3645
Alignment:
Q  13 tcatcagagggaagtgatcctgatgcttgaggaataggatcagctgacatctcattctcttgaggcaagctaggttcagcagatgcatttgtctgaacat 112  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4144 tcatcagagggaagtgatcctgatgcttgaggaataggatcaactgacatctcattctcttgaggcaagctaggttcagcagatgcatttgtctgaacat 4045  T
Q  113 tctgagctgtgattgcaggattttcttgaagttcctgaatcatttcatgagctt------gcacttcctcattgttttcaggctgtgcatcttggtacac 206  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| |||||||      ||||||||||||||||||||||||||||||||||||||||    
T  4044 tctgaactgtgattgcaggattttcttgaagttcctgaatcatttcgtgagcttcctgaagcacttcctcattgttttcaggctgtgcatcttggtacac 3945  T
Q  207 attcaaatctgtgcttggatcttccacatttagatcaaagccagtttgattttcagcttgctcaaaaccttgaggatccatttcatcatgtccctcactc 306  Q
    ||||| ||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||| ||||||||||||||||| ||||||    
T  3944 attcacatctgagcttggatcttccacatttagattaaagccagtttgattttcagcttgctcaaactcttgaggctccatttcatcatgtccatcactc 3845  T
Q  307 attctttgagagacaagaatttcagccacatcctgcatgtcttgatcattttcctgagatccttcttccacagcataagcaacttcttgagcagtttgct 406  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3844 attctttgagagacaagaatttcagccacatcttgcatgtcttgatcattttcctgagatccttcttccacagcataagcaacttcttgagcagtttgct 3745  T
Q  407 cagtattttcttcaacttcattaactttctgaagttgttcagtaggaggagtatcaacattctgtacttcagcagcagcagttgagtcaacattctgaag 506  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||| |||  |||||||||||| || |||||| || ||||||||||||| ||||||||    
T  3744 cagtattttcttcaacttcattaactttctgaagttggtcagcaggtggaacatcaacattctgaacatcagcaacaccagttgagtcaactttctgaag 3645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0313; HSP #2
Raw Score: 393; E-Value: 0
Query Start/End: Original strand, 13 - 506
Target Start/End: Complemental strand, 18301 - 17802
Alignment:
Q  13 tcatcagagggaagtgatcctgatgcttgaggaataggatcagctgacatctcattctcttgaggcaagctaggttcagcagatgcatttgtctgaacat 112  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18301 tcatcagagggaagtgatcctgatgcttgaggaataggatcaactgacatctcattctcttgaggcaagctaggttcagcagatgcatttgtctgaacat 18202  T
Q  113 tctgagctgtgattgcaggattttcttgaagttcctgaatcatttcatgagctt------gcacttcctcattgttttcaggctgtgcatcttggtacac 206  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| |||||||      ||||||||||||||||||||||||||||||||||||||||    
T  18201 tctgaactgtgattgcaggattttcttgaagttcctgaatcatttcgtgagcttcctgaagcacttcctcattgttttcaggctgtgcatcttggtacac 18102  T
Q  207 attcaaatctgtgcttggatcttccacatttagatcaaagccagtttgattttcagcttgctcaaaaccttgaggatccatttcatcatgtccctcactc 306  Q
    ||||| ||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||| ||||||||||||||||| ||||||    
T  18101 attcacatctgagcttggatcttccacatttagattaaagccagtttgattttcagcttgctcaaactcttgaggctccatttcatcatgtccatcactc 18002  T
Q  307 attctttgagagacaagaatttcagccacatcctgcatgtcttgatcattttcctgagatccttcttccacagcataagcaacttcttgagcagtttgct 406  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18001 attctttgagagacaagaatttcagccacatcttgcatgtcttgatcattttcctgagatccttcttccacagcataagcaacttcttgagcagtttgct 17902  T
Q  407 cagtattttcttcaacttcattaactttctgaagttgttcagtaggaggagtatcaacattctgtacttcagcagcagcagttgagtcaacattctgaag 506  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||| |||  |||||||||||| || |||||| || ||||||||||||| ||||||||    
T  17901 cagtattttcttcaacttcattaactttctgaagttggtcagcaggtggaacatcaacattctgaacatcagcaacaccagttgagtcaactttctgaag 17802  T

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Target: scaffold0764 (Bit Score: 373; Significance: 0; HSPs: 1)
Name: scaffold0764
Description:

Target: scaffold0764; HSP #1
Raw Score: 373; E-Value: 0
Query Start/End: Original strand, 13 - 506
Target Start/End: Original strand, 2468 - 2970
Alignment:
Q  13 tcatcagagggaagtgatcctgatgcttgaggaataggatcagctgacatctcattctcttgaggcaagctaggttcagcagatgcatttgtctgaacat 112  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2468 tcatcagagggaagtgatcctgatgcttgaggaataggatcaactgacatctcattctcttgaggcaagctaggttcagcagatgcatttgtctgaacat 2567  T
Q  113 tctgagctgtgattgcaggattttcttgaagttcctgaatcatttcatgagctt------gcacttcctcattgttttcaggctgtgcatcttggtacac 206  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| |||||||      ||||||||||||||||||||||||||||||||||||||||    
T  2568 tctgaactgtgattgcaggattttcttgaagttcctgaatcatttcgtgagcttcctgaagcacttcctcattgttttcaggctgtgcatcttggtacac 2667  T
Q  207 attcaaatctgtgcttggatcttccacatttagatcaaagccagtttga--ttttcagcttgctcaaaaccttgaggatccatttcatcatgtccctcac 304  Q
    ||||| ||||| ||||||||||||||||||||||| ||||||||||||   |||||||||||||||||  ||||||| ||||||||||||||||| ||||    
T  2668 attcacatctgagcttggatcttccacatttagattaaagccagtttgtatttttcagcttgctcaaactcttgaggctccatttcatcatgtccatcac 2767  T
Q  305 tcattcttt-gagagacaagaatttcagccacatcctgcatgtcttgatcattttcctgagatccttcttccacagcataagcaacttcttgagcagttt 403  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2768 tcattcttttgagagacaagaatttcagccacatcttgcatgtcttgatcattttcctgagatccttcttccacagcataagcaacttcttgagcagttt 2867  T
Q  404 gctcagtattttcttcaacttcattaactttctgaagttgttcagtaggaggagtatcaacattctgtacttcagcagcagcagttgagtcaacattctg 503  Q
    |||||||||||||||||||||||||||||||||||||||| |||| ||| |||  |||||||||||| || |||||| || ||||||||||||| |||||    
T  2868 gctcagtattttcttcaacttcattaactttctgaagttggtcagcaggtggaacatcaacattctgaacatcagcaacaccagttgagtcaactttctg 2967  T
Q  504 aag 506  Q
    |||    
T  2968 aag 2970  T

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Target: scaffold1531 (Bit Score: 125; Significance: 4e-64; HSPs: 1)
Name: scaffold1531
Description:

Target: scaffold1531; HSP #1
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 229 - 508
Target Start/End: Complemental strand, 1685 - 1408
Alignment:
Q  229 tccacatttagatcaaagccagtttgattttcagcttgctcaaaaccttgaggatccatttcatcatgtccctcactcattctttgagagacaagaattt 328  Q
    ||||||||||||||||||||||||||||| |||||||||||||   |||||| ||||||||||||||||||||||||||| |||||||||||||| ||||    
T  1685 tccacatttagatcaaagccagtttgattatcagcttgctcaatttcttgagaatccatttcatcatgtccctcactcatcctttgagagacaaggattt 1586  T
Q  329 cagccacatcctgcatgtcttgatcattttcctgagatccttcttccacagcataagcaacttcttgagcagtttgctcagtattttcttcaacttcatt 428  Q
    |||||||||| ||||||||||| ||||||||||||||| ||||||| ||   || |  |||||||||||  |||| |||| ||||| ||||||||||||     
T  1585 cagccacatcatgcatgtcttggtcattttcctgagatgcttcttcaac--tatcaataacttcttgagttgttttctcattatttccttcaacttcatc 1488  T
Q  429 aactttctgaagttgttcagtaggaggagtatcaacattctgtacttcagcagcagcagttgagtcaacattctgaagtt 508  Q
    ||||||||||||||||| || ||| | |  | |||| |||||  | |||||||||  |||||||||||| |||| |||||    
T  1487 aactttctgaagttgtttagcaggtgaaacaacaacgttctgatcatcagcagcactagttgagtcaactttctaaagtt 1408  T

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Target: scaffold0059 (Bit Score: 54; Significance: 9e-22; HSPs: 2)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 295 - 448
Target Start/End: Original strand, 42511 - 42664
Alignment:
Q  295 tgtccctcactcattctttgagagacaagaatttcagccacatcctgcatgtcttgatcattttcctgagatccttcttccacagcataagcaacttctt 394  Q
    ||||| ||||||||| ||| ||| || || |||||||||||||| |||||||| ||||||| || ||||||| | | ||| ||| ||| | |||| |  |    
T  42511 tgtccttcactcattatttaagaaaccaggatttcagccacatcatgcatgtcctgatcatctttctgagattccttttcaacaacatcaacaacgttct 42610  T
Q  395 gagcagtttgctcagtattttcttcaacttcattaactttctgaagttgttcag 448  Q
    || | |||| ||||||||||||||||||||||  ||||||||||||||||||||    
T  42611 gaactgttttctcagtattttcttcaacttcaacaactttctgaagttgttcag 42664  T

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Target: scaffold0059; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 98 - 155
Target Start/End: Original strand, 42347 - 42404
Alignment:
Q  98 catttgtctgaacattctgagctgtgattgcaggattttcttgaagttcctgaatcat 155  Q
    ||||||| |||||||||||| || ||||| |||||||||||||||  |||||||||||    
T  42347 catttgtttgaacattctgaactatgatttcaggattttcttgaatatcctgaatcat 42404  T

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