View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8448_low_10 (Length: 405)

Name: NF8448_low_10
Description: NF8448
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8448_low_10
NF8448_low_10
[»] chr3 (60 HSPs)
chr3 (17-392)||(4536970-4537347)
chr3 (191-355)||(8247706-8247870)
chr3 (185-354)||(29366733-29366902)
chr3 (191-355)||(46421054-46421218)
chr3 (184-355)||(13628802-13628974)
chr3 (184-355)||(13730614-13730785)
chr3 (184-355)||(40272824-40272993)
chr3 (189-355)||(9607179-9607345)
chr3 (184-355)||(1217066-1217233)
chr3 (184-355)||(6411834-6412002)
chr3 (184-355)||(22609743-22609910)
chr3 (184-321)||(516419-516557)
chr3 (265-355)||(10870042-10870132)
chr3 (184-356)||(52926231-52926392)
chr3 (184-355)||(5173731-5173902)
chr3 (184-355)||(12914047-12914216)
chr3 (185-332)||(34420656-34420802)
chr3 (185-355)||(16735417-16735584)
chr3 (183-355)||(26573104-26573273)
chr3 (192-320)||(45139497-45139624)
chr3 (266-355)||(7696977-7697066)
chr3 (184-355)||(39203492-39203659)
chr3 (263-355)||(4495753-4495845)
chr3 (183-303)||(10795434-10795554)
chr3 (184-342)||(26869696-26869851)
chr3 (184-351)||(22122929-22123092)
chr3 (183-332)||(25944468-25944616)
chr3 (184-281)||(45786226-45786323)
chr3 (184-333)||(53996577-53996725)
chr3 (183-355)||(12525386-12525553)
chr3 (264-355)||(45620919-45621009)
chr3 (247-329)||(39211992-39212074)
chr3 (184-288)||(54484733-54484836)
chr3 (184-289)||(49013485-49013590)
chr3 (183-316)||(54374356-54374488)
chr3 (185-328)||(7942993-7943134)
chr3 (184-288)||(14987000-14987104)
chr3 (255-321)||(30928228-30928294)
chr3 (184-333)||(44403567-44403715)
chr3 (184-272)||(353361-353449)
chr3 (184-354)||(25517182-25517353)
chr3 (184-235)||(31592941-31592992)
chr3 (184-333)||(19731000-19731147)
chr3 (184-236)||(829454-829506)
chr3 (191-235)||(10300585-10300629)
chr3 (188-320)||(33926094-33926224)
chr3 (184-232)||(45948850-45948898)
chr3 (184-220)||(47624208-47624244)
chr3 (309-352)||(21874999-21875042)
chr3 (184-235)||(24851313-24851364)
chr3 (184-235)||(34771376-34771427)
chr3 (184-214)||(4495688-4495718)
chr3 (184-214)||(10484628-10484658)
chr3 (263-333)||(53062036-53062106)
chr3 (184-214)||(54032583-54032613)
chr3 (264-337)||(11461731-11461804)
chr3 (184-213)||(40390357-40390386)
chr3 (192-281)||(55401226-55401314)
chr3 (185-213)||(14266385-14266413)
chr3 (184-232)||(30452892-30452940)
[»] chr2 (57 HSPs)
chr2 (184-355)||(14530272-14530443)
chr2 (184-354)||(10543653-10543823)
chr2 (184-353)||(11514392-11514558)
chr2 (184-355)||(8455328-8455497)
chr2 (184-354)||(24200635-24200805)
chr2 (184-356)||(9671133-9671302)
chr2 (183-355)||(7214488-7214660)
chr2 (180-354)||(14544018-14544193)
chr2 (184-355)||(25079729-25079899)
chr2 (184-355)||(12023931-12024099)
chr2 (183-353)||(19977725-19977893)
chr2 (184-331)||(31158451-31158598)
chr2 (184-355)||(21779273-21779440)
chr2 (184-355)||(23397720-23397887)
chr2 (184-356)||(5840981-5841153)
chr2 (184-337)||(17667974-17668125)
chr2 (186-353)||(17896215-17896381)
chr2 (184-352)||(25249750-25249915)
chr2 (183-354)||(32781300-32781467)
chr2 (188-332)||(99281-99421)
chr2 (184-318)||(10546153-10546286)
chr2 (184-334)||(44643497-44643646)
chr2 (267-357)||(17705447-17705537)
chr2 (184-242)||(23488548-23488606)
chr2 (184-355)||(26684632-26684803)
chr2 (180-332)||(45235825-45235976)
chr2 (185-337)||(17623536-17623686)
chr2 (183-320)||(19614981-19615117)
chr2 (184-288)||(40762246-40762348)
chr2 (183-235)||(14444800-14444852)
chr2 (189-241)||(19185760-19185812)
chr2 (186-349)||(27573581-27573741)
chr2 (276-355)||(22371011-22371090)
chr2 (184-345)||(24860000-24860157)
chr2 (309-355)||(39189556-39189602)
chr2 (183-235)||(30826108-30826159)
chr2 (185-235)||(31523303-31523353)
chr2 (186-232)||(34766330-34766376)
chr2 (307-360)||(27466263-27466316)
chr2 (184-233)||(40579761-40579810)
chr2 (184-220)||(124926-124962)
chr2 (184-220)||(22371199-22371235)
chr2 (264-331)||(5450263-5450330)
chr2 (183-222)||(8575980-8576019)
chr2 (263-354)||(17472926-17473017)
chr2 (185-232)||(24890486-24890533)
chr2 (184-235)||(36871564-36871614)
chr2 (264-335)||(39914396-39914467)
chr2 (263-334)||(40416960-40417031)
chr2 (192-233)||(33795359-33795400)
chr2 (184-233)||(41409936-41409985)
chr2 (265-338)||(44604825-44604898)
chr2 (184-232)||(34080176-34080224)
chr2 (291-346)||(35017781-35017836)
chr2 (183-211)||(39499241-39499269)
chr2 (186-214)||(39914320-39914348)
chr2 (191-346)||(44521392-44521544)
[»] chr1 (62 HSPs)
chr1 (188-357)||(46247969-46248136)
chr1 (184-355)||(20004102-20004273)
chr1 (184-355)||(18944620-18944792)
chr1 (186-355)||(27201624-27201793)
chr1 (184-355)||(10668197-10668373)
chr1 (184-349)||(30395738-30395903)
chr1 (186-352)||(23768334-23768498)
chr1 (183-355)||(32632568-32632737)
chr1 (184-355)||(34725110-34725277)
chr1 (184-355)||(14617015-14617184)
chr1 (184-350)||(18741969-18742137)
chr1 (183-332)||(19701570-19701718)
chr1 (184-355)||(46991781-46991950)
chr1 (184-316)||(35005139-35005271)
chr1 (184-333)||(35117777-35117927)
chr1 (183-355)||(47214488-47214656)
chr1 (184-336)||(6925096-6925246)
chr1 (183-355)||(19932764-19932933)
chr1 (184-355)||(38478294-38478461)
chr1 (188-355)||(8197020-8197185)
chr1 (184-355)||(27474258-27474426)
chr1 (185-355)||(41319819-41319987)
chr1 (185-349)||(12126850-12127010)
chr1 (265-355)||(22930158-22930248)
chr1 (184-351)||(19414420-19414583)
chr1 (184-355)||(45812549-45812716)
chr1 (184-349)||(9939443-9939610)
chr1 (184-350)||(45402077-45402242)
chr1 (181-333)||(18724555-18724704)
chr1 (263-357)||(25290138-25290234)
chr1 (247-355)||(4430099-4430207)
chr1 (265-345)||(33222971-33223051)
chr1 (291-355)||(34714600-34714664)
chr1 (184-346)||(2435798-2435958)
chr1 (192-321)||(11596524-11596650)
chr1 (291-353)||(40424721-40424783)
chr1 (184-242)||(42304219-42304277)
chr1 (183-300)||(22324925-22325040)
chr1 (184-235)||(4349733-4349784)
chr1 (185-232)||(33594144-33594191)
chr1 (184-242)||(50606491-50606549)
chr1 (184-236)||(45264411-45264463)
chr1 (239-333)||(50760291-50760385)
chr1 (264-333)||(52910216-52910285)
chr1 (184-232)||(1517323-1517371)
chr1 (188-236)||(6358216-6358264)
chr1 (196-334)||(20036218-20036355)
chr1 (180-240)||(30682902-30682961)
chr1 (184-318)||(35253199-35253329)
chr1 (188-236)||(41440618-41440666)
chr1 (184-232)||(43768237-43768285)
chr1 (184-235)||(4587575-4587626)
chr1 (184-334)||(15511160-15511311)
chr1 (263-330)||(22327101-22327168)
chr1 (184-235)||(23796560-23796611)
chr1 (184-235)||(30555210-30555261)
chr1 (184-219)||(35019340-35019375)
chr1 (264-333)||(2435983-2436052)
chr1 (192-332)||(44485129-44485267)
chr1 (310-354)||(21723642-21723686)
chr1 (183-235)||(28894569-28894621)
chr1 (184-236)||(39214970-39215022)
[»] chr5 (43 HSPs)
chr5 (184-355)||(38879535-38879706)
chr5 (184-352)||(4619116-4619284)
chr5 (184-352)||(43334159-43334327)
chr5 (184-355)||(24448844-24449013)
chr5 (186-352)||(27328709-27328875)
chr5 (184-355)||(41014273-41014441)
chr5 (186-355)||(22187239-22187408)
chr5 (184-344)||(12006340-12006500)
chr5 (184-355)||(8169996-8170163)
chr5 (266-355)||(35710267-35710356)
chr5 (266-355)||(37024646-37024735)
chr5 (264-355)||(1565385-1565476)
chr5 (264-355)||(23974735-23974825)
chr5 (184-321)||(32703412-32703545)
chr5 (183-333)||(28516444-28516593)
chr5 (184-346)||(39301087-39301246)
chr5 (184-235)||(16957386-16957437)
chr5 (184-234)||(25622533-25622583)
chr5 (184-281)||(13801779-13801876)
chr5 (291-355)||(22600408-22600472)
chr5 (184-232)||(39801591-39801639)
chr5 (184-317)||(42924842-42924977)
chr5 (184-235)||(43574678-43574729)
chr5 (183-225)||(31694119-31694161)
chr5 (195-354)||(2838733-2838890)
chr5 (191-236)||(10306493-10306538)
chr5 (186-219)||(18684361-18684394)
chr5 (299-352)||(22861791-22861844)
chr5 (183-235)||(7097771-7097823)
chr5 (311-355)||(19438703-19438747)
chr5 (184-236)||(21784344-21784396)
chr5 (184-288)||(29334416-29334519)
chr5 (283-346)||(39079875-39079937)
chr5 (186-232)||(5873336-5873382)
chr5 (184-214)||(13774958-13774988)
chr5 (184-281)||(16880659-16880754)
chr5 (185-235)||(19142956-19143006)
chr5 (184-222)||(32354212-32354250)
chr5 (184-225)||(29184073-29184114)
chr5 (265-321)||(1850628-1850684)
chr5 (181-213)||(4654424-4654456)
chr5 (184-236)||(12575672-12575724)
chr5 (185-213)||(18099955-18099983)
[»] chr8 (42 HSPs)
chr8 (184-355)||(36720750-36720919)
chr8 (184-355)||(39461006-39461177)
chr8 (186-355)||(28817640-28817807)
chr8 (184-355)||(44530103-44530272)
chr8 (184-355)||(7136539-7136710)
chr8 (184-355)||(12670262-12670429)
chr8 (184-355)||(30454109-30454276)
chr8 (184-355)||(17823530-17823699)
chr8 (184-355)||(29521697-29521866)
chr8 (184-355)||(35261633-35261802)
chr8 (183-355)||(2626473-2626646)
chr8 (184-351)||(20284081-20284250)
chr8 (184-351)||(21070709-21070879)
chr8 (184-355)||(45071219-45071387)
chr8 (184-355)||(6760777-6760947)
chr8 (185-355)||(26954086-26954257)
chr8 (187-355)||(13160656-13160821)
chr8 (216-354)||(11748254-11748392)
chr8 (185-346)||(44781517-44781677)
chr8 (266-355)||(20869588-20869677)
chr8 (191-355)||(24245405-24245565)
chr8 (184-350)||(8897776-8897940)
chr8 (184-351)||(25250480-25250647)
chr8 (265-355)||(18164850-18164940)
chr8 (265-346)||(28407379-28407460)
chr8 (184-281)||(16225047-16225144)
chr8 (184-337)||(12625861-12626013)
chr8 (184-242)||(16013521-16013579)
chr8 (192-332)||(24365079-24365218)
chr8 (183-288)||(29877115-29877218)
chr8 (184-300)||(5689640-5689754)
chr8 (184-316)||(8483950-8484080)
chr8 (184-288)||(20869944-20870048)
chr8 (184-221)||(27468104-27468141)
chr8 (184-220)||(18164772-18164808)
chr8 (184-232)||(27507985-27508033)
chr8 (312-355)||(23286431-23286474)
chr8 (184-235)||(26102589-26102640)
chr8 (184-235)||(28407475-28407526)
chr8 (184-235)||(31457244-31457295)
chr8 (313-355)||(40605044-40605086)
chr8 (184-260)||(33866999-33867075)
[»] chr4 (68 HSPs)
chr4 (184-348)||(16408613-16408777)
chr4 (184-355)||(6430638-6430806)
chr4 (185-355)||(5648213-5648380)
chr4 (184-355)||(21646918-21647089)
chr4 (184-352)||(54730206-54730375)
chr4 (184-355)||(23501747-23501912)
chr4 (184-336)||(44363142-44363294)
chr4 (189-352)||(16911519-16911682)
chr4 (184-355)||(11054160-11054327)
chr4 (184-355)||(20224938-20225105)
chr4 (184-355)||(48598837-48599004)
chr4 (185-355)||(30639334-30639501)
chr4 (184-333)||(35567146-35567293)
chr4 (266-355)||(5306755-5306844)
chr4 (184-336)||(40915802-40915951)
chr4 (184-355)||(47528542-47528709)
chr4 (184-350)||(30352592-30352767)
chr4 (183-352)||(14983791-14983958)
chr4 (184-334)||(25343162-25343312)
chr4 (191-355)||(10660358-10660521)
chr4 (191-355)||(10874503-10874666)
chr4 (186-355)||(20405047-20405210)
chr4 (184-288)||(20639670-20639773)
chr4 (184-346)||(487138-487306)
chr4 (183-321)||(25463110-25463245)
chr4 (184-355)||(13256411-13256578)
chr4 (185-333)||(20908649-20908797)
chr4 (296-352)||(5313116-5313172)
chr4 (264-351)||(14590795-14590882)
chr4 (191-329)||(17043413-17043549)
chr4 (184-334)||(19027823-19027971)
chr4 (184-329)||(54175043-54175188)
chr4 (186-355)||(37494805-37494972)
chr4 (184-355)||(55766478-55766647)
chr4 (296-352)||(17315420-17315476)
chr4 (184-317)||(29207910-29208039)
chr4 (263-354)||(54966977-54967067)
chr4 (184-234)||(38755920-38755970)
chr4 (183-355)||(55830732-55830902)
chr4 (183-232)||(30690187-30690236)
chr4 (186-234)||(33836501-33836549)
chr4 (265-333)||(42164239-42164307)
chr4 (184-235)||(11394924-11394975)
chr4 (184-235)||(11404651-11404702)
chr4 (190-333)||(39029078-39029220)
chr4 (190-233)||(44718641-44718684)
chr4 (186-237)||(47482864-47482915)
chr4 (184-222)||(35532077-35532115)
chr4 (184-222)||(40553949-40553987)
chr4 (184-234)||(50555668-50555718)
chr4 (184-281)||(51865050-51865145)
chr4 (184-233)||(32484307-32484356)
chr4 (186-234)||(8820581-8820629)
chr4 (312-352)||(18969698-18969738)
chr4 (184-260)||(20225123-20225199)
chr4 (185-236)||(21489159-21489210)
chr4 (184-235)||(25629121-25629172)
chr4 (184-235)||(28494223-28494274)
chr4 (184-235)||(38786681-38786732)
chr4 (188-242)||(16494284-16494338)
chr4 (184-234)||(25388249-25388299)
chr4 (183-213)||(37038134-37038164)
chr4 (190-236)||(49938611-49938657)
chr4 (301-354)||(20373921-20373974)
chr4 (185-321)||(7038041-7038174)
chr4 (184-232)||(19027986-19028034)
chr4 (188-236)||(36816400-36816448)
chr4 (185-326)||(41018807-41018945)
[»] chr7 (60 HSPs)
chr7 (184-355)||(42805478-42805649)
chr7 (186-355)||(42798623-42798790)
chr7 (184-355)||(2541031-2541201)
chr7 (184-355)||(22698979-22699151)
chr7 (184-355)||(43557426-43557598)
chr7 (184-356)||(47716412-47716584)
chr7 (184-351)||(14732833-14732999)
chr7 (184-355)||(48735134-48735302)
chr7 (184-355)||(21172021-21172188)
chr7 (184-348)||(11617600-11617762)
chr7 (184-355)||(32758215-32758382)
chr7 (186-354)||(5180169-5180337)
chr7 (184-349)||(40463837-40463999)
chr7 (183-355)||(42476827-42476995)
chr7 (201-355)||(46354148-46354302)
chr7 (185-348)||(10693086-10693245)
chr7 (184-355)||(47077867-47078034)
chr7 (184-344)||(19426902-19427059)
chr7 (186-346)||(23419688-23419845)
chr7 (184-355)||(35334828-35334995)
chr7 (184-347)||(27629596-27629757)
chr7 (265-355)||(42495926-42496016)
chr7 (183-335)||(33871921-33872070)
chr7 (291-355)||(7193039-7193103)
chr7 (181-334)||(39123865-39124021)
chr7 (265-354)||(18326989-18327078)
chr7 (192-346)||(28362165-28362316)
chr7 (189-355)||(34626225-34626388)
chr7 (183-238)||(45018934-45018989)
chr7 (264-350)||(7794596-7794682)
chr7 (184-305)||(7879642-7879761)
chr7 (196-333)||(14099030-14099165)
chr7 (196-333)||(14409047-14409182)
chr7 (184-327)||(42391112-42391251)
chr7 (184-321)||(18747474-18747610)
chr7 (184-352)||(25198679-25198849)
chr7 (266-355)||(13805057-13805145)
chr7 (193-333)||(19266426-19266564)
chr7 (187-260)||(33500562-33500635)
chr7 (263-355)||(21447544-21447636)
chr7 (264-347)||(5814433-5814516)
chr7 (184-219)||(36602535-36602570)
chr7 (184-320)||(29907408-29907541)
chr7 (184-222)||(42495874-42495912)
chr7 (184-333)||(16341254-16341402)
chr7 (185-234)||(18512466-18512515)
chr7 (184-305)||(21566439-21566559)
chr7 (265-333)||(19265791-19265859)
chr7 (291-355)||(28078248-28078312)
chr7 (266-356)||(2663025-2663113)
chr7 (187-242)||(3469190-3469245)
chr7 (291-354)||(8149063-8149126)
chr7 (192-235)||(27889336-27889379)
chr7 (301-352)||(29140487-29140538)
chr7 (184-214)||(25434113-25434143)
chr7 (291-360)||(12473253-12473322)
chr7 (265-334)||(22065563-22065632)
chr7 (184-288)||(23231578-23231680)
chr7 (184-240)||(31591121-31591177)
chr7 (265-333)||(44123712-44123780)
[»] chr6 (36 HSPs)
chr6 (184-345)||(12221926-12222088)
chr6 (184-355)||(29355867-29356039)
chr6 (184-357)||(1354769-1354938)
chr6 (184-355)||(1346918-1347085)
chr6 (184-353)||(3815089-3815256)
chr6 (183-355)||(9161077-9161248)
chr6 (263-355)||(8409197-8409289)
chr6 (194-337)||(14553484-14553626)
chr6 (184-242)||(12885978-12886036)
chr6 (183-352)||(32728168-32728334)
chr6 (263-355)||(14975169-14975261)
chr6 (247-351)||(20400625-20400729)
chr6 (184-350)||(2166422-2166587)
chr6 (184-350)||(2178055-2178220)
chr6 (185-355)||(15866052-15866218)
chr6 (264-352)||(12063424-12063512)
chr6 (291-355)||(33922945-33923009)
chr6 (263-357)||(1941807-1941901)
chr6 (184-234)||(6808468-6808518)
chr6 (184-250)||(12892066-12892132)
chr6 (189-235)||(32579497-32579543)
chr6 (210-355)||(6024187-6024332)
chr6 (300-337)||(8417444-8417481)
chr6 (302-351)||(24734591-24734640)
chr6 (298-354)||(13905103-13905158)
chr6 (184-235)||(13267797-13267848)
chr6 (278-345)||(19649271-19649338)
chr6 (188-235)||(24097649-24097696)
chr6 (191-222)||(29016301-29016332)
chr6 (184-242)||(3116141-3116199)
chr6 (184-222)||(10734917-10734955)
chr6 (180-222)||(20906794-20906836)
chr6 (291-337)||(27855555-27855601)
chr6 (184-233)||(23930139-23930188)
chr6 (184-232)||(11395836-11395884)
chr6 (184-228)||(25557802-25557846)
[»] scaffold0049 (1 HSPs)
scaffold0049 (186-350)||(58936-59100)
[»] scaffold0258 (1 HSPs)
scaffold0258 (184-353)||(13036-13202)
[»] scaffold0057 (3 HSPs)
scaffold0057 (186-355)||(24786-24948)
scaffold0057 (184-346)||(46794-46954)
scaffold0057 (186-236)||(46721-46771)
[»] scaffold0168 (1 HSPs)
scaffold0168 (184-355)||(30533-30700)
[»] scaffold0311 (1 HSPs)
scaffold0311 (185-346)||(10773-10932)
[»] scaffold0187 (4 HSPs)
scaffold0187 (266-352)||(10140-10226)
scaffold0187 (266-352)||(20468-20554)
scaffold0187 (291-355)||(8899-8963)
scaffold0187 (291-355)||(19227-19291)
[»] scaffold0024 (1 HSPs)
scaffold0024 (283-355)||(83829-83901)
[»] scaffold0223 (1 HSPs)
scaffold0223 (183-348)||(11093-11253)
[»] scaffold0005 (1 HSPs)
scaffold0005 (264-351)||(226496-226583)
[»] scaffold1176 (1 HSPs)
scaffold1176 (183-347)||(1598-1758)
[»] scaffold0254 (1 HSPs)
scaffold0254 (266-350)||(4117-4200)
[»] scaffold0018 (1 HSPs)
scaffold0018 (183-235)||(72878-72930)
[»] scaffold0180 (1 HSPs)
scaffold0180 (184-235)||(24145-24196)
[»] scaffold0015 (1 HSPs)
scaffold0015 (184-235)||(48646-48697)
[»] scaffold0954 (1 HSPs)
scaffold0954 (184-288)||(3565-3667)
[»] scaffold0194 (2 HSPs)
scaffold0194 (184-260)||(24697-24771)
scaffold0194 (278-354)||(24619-24695)


Alignment Details
Target: chr3 (Bit Score: 193; Significance: 1e-105; HSPs: 60)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 17 - 392
Target Start/End: Complemental strand, 4537347 - 4536970
Alignment:
Q  17 actgatctagtttttaaagatattgcttaatagtgttgttacaatgaatgttgaataatattcatatattccaacaaaacattgacnnnnnnnnn--att 114  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||    |||||||||||||| |||||||||||||||||||||           |||    
T  4537347 actgatctagtttttaaagatattgcttaatagtgttattacaatg----ttgaataatattcacatattccaacaaaacattgacttttttttttaatt 4537252  T
Q  115 tccatttcagcaactacaatcatcttattcgtgccattgtt-atatcaaatgtcagcacttctcctacttggtgcactaaagctcccgcatacgcagggt 213  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||  |||| ||||||| ||||||||| |||||    
T  4537251 tccatttcagcaactacaatcatcttattcgtggcattgttgatatcaaatgtcagcacttctcctacttaatgcattaaagcttccgcatacgtagggt 4537152  T
Q  214 ctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttaca---aaagaggctatttccaaaacttaaacccgtgacatttc 310  Q
     ||||||||||| | | |||||||  ||| ||||||| ||||||||||||||||||  |   ||| ||||| ||||||||||||||||||||||| ||||    
T  4537151 ttgggaaggagtcctatcatttttgatgtattatacgcagtcttacctagttttttttataaaaaaaggctgtttccaaaacttaaacccgtgacctttc 4537052  T
Q  311 agtcacatgaccacaactttaccagttacgccaaggttacccctcgtttagcggaatgattattgaaatataataaatgtct 392  Q
    | ||||||||||||||| |||||  ||| |||||||||||||||| ||||| ||||||||||||||||||||||||||||||    
T  4537051 aatcacatgaccacaacattaccgattatgccaaggttacccctcatttagtggaatgattattgaaatataataaatgtct 4536970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 191 - 355
Target Start/End: Original strand, 8247706 - 8247870
Alignment:
Q  191 taaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctatttccaaa 290  Q
    |||||||||||||||||||||||| |||||||||| |||||||| || |||| || |||| |  ||||||  |||||||||| |||||||| ||||||      
T  8247706 taaagctcccgcatacgcagggtccgggaaggagtcccaccattattggtgtattgtacgcaaccttaccctgttttttacacaagaggctgtttccagg 8247805  T
Q  291 acttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccctc 355  Q
    |||| |||||||||| ||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  8247806 acttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacccctc 8247870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 185 - 354
Target Start/End: Original strand, 29366733 - 29366902
Alignment:
Q  185 gtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctatt 284  Q
    |||||||||||||||| ||||||||||||| ||||||| || |||||||| || |||| || |||| || ||||||  |||||||| | |||||||| ||    
T  29366733 gtgcactaaagctcccacatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttatacaagaggctgtt 29366832  T
Q  285 tccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccct 354  Q
    ||||  |||| |||||||||| ||| ||||||||||| ||||||||||||||||||||||||||||||||    
T  29366833 tccaggacttgaacccgtgaccttttagtcacatgacaacaactttaccagttacgccaaggttacccct 29366902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 191 - 355
Target Start/End: Original strand, 46421054 - 46421218
Alignment:
Q  191 taaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctatttccaaa 290  Q
    |||||||||||||||||||||||| ||||||| || |||||||| || |||| || |||| || ||||||  |||||||||| |||||||| ||||||      
T  46421054 taaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttccagg 46421153  T
Q  291 acttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccctc 355  Q
    |||| |||||||||| ||| ||||||||||| ||||||||||||||| |||||||||||||||||    
T  46421154 acttgaacccgtgacctttaagtcacatgacaacaactttaccagttgcgccaaggttacccctc 46421218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 184 - 355
Target Start/End: Original strand, 13628802 - 13628974
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctat 283  Q
    ||||||||||||||||||||||||||||||| ||||||| || |||||||| || |||| || |||| || ||||||  |||| ||||| |||||||| |    
T  13628802 ggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtttcttacacaagaggctgt 13628901  T
Q  284 ttccaaaacttaaacccgtgacatttcagtcacatgaccacaac-tttaccagttacgccaaggttacccctc 355  Q
    |||||  |||| |||||||||| ||||||||||||||| ||||| ||||||||||  ||||||||||||||||    
T  13628902 ttccaggacttgaacccgtgacctttcagtcacatgacaacaacttttaccagttgtgccaaggttacccctc 13628974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 184 - 355
Target Start/End: Original strand, 13730614 - 13730785
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctat 283  Q
    |||||||||||||||||||||| || ||||| ||||||| || |||||||| || |||| || |||  || ||||||  |||||||||| |||||||| |    
T  13730614 ggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacacagccttaccctgttttttacacaagaggctgt 13730713  T
Q  284 ttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccctc 355  Q
    |||||  |||| |||||||||| || |||||||||||| ||||||||||||||| |||||||||||||||||    
T  13730714 ttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgccaaggttacccctc 13730785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 184 - 355
Target Start/End: Original strand, 40272824 - 40272993
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctat 283  Q
    ||||||||||||||||||||||||||||||| ||||||| || |||||||||   |||| || |||| || ||||||  |||||||||| |||||| | |    
T  40272824 ggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttg--gtgtattgtacgcagccttaccctgttttttacacaagaggttgt 40272921  T
Q  284 ttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccctc 355  Q
    |||||  |||| ||||| |||| || |||||||||||| ||||||||||||||| |||||||||||||||||    
T  40272922 ttccaggacttgaacccatgaccttccagtcacatgacaacaactttaccagttgcgccaaggttacccctc 40272993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 189 - 355
Target Start/End: Complemental strand, 9607345 - 9607179
Alignment:
Q  189 actaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctatttcca 288  Q
    ||||||||||||||||| || ||||||||||||| || ||| |||| || |||| || |||| || ||||||  |||||||||  |||||||| ||||||    
T  9607345 actaaagctcccgcatatgcggggtctgggaaggggtcccaacattattggtgtattctacgcagccttaccctgttttttacgcaagaggctgtttcca 9607246  T
Q  289 aaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccctc 355  Q
      |||| ||||  |||| ||||||||||||||| |||||||||| |||| |||||||||||||||||    
T  9607245 ggacttgaaccgatgacctttcagtcacatgacaacaactttacaagttgcgccaaggttacccctc 9607179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 184 - 355
Target Start/End: Complemental strand, 1217233 - 1217066
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctat 283  Q
    ||||||||| |||||||||||| |||||||| ||||||| || || ||||||   |||| || |||| || ||||||  |||||  ||| |||||||| |    
T  1217233 ggtgcactagagctcccgcatatgcagggtccgggaaggggtcccgccatttg--gtgtattgtacgcagccttaccctgtttt--acacaagaggctgt 1217138  T
Q  284 ttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccctc 355  Q
    |||||  |||| |||||||||| ||||||| ||||||| ||||||||||||||| |||||||||||||||||    
T  1217137 ttccaggacttgaacccgtgacctttcagtgacatgactacaactttaccagttgcgccaaggttacccctc 1217066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 184 - 355
Target Start/End: Original strand, 6411834 - 6412002
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctat 283  Q
    |||||||||||||||||||||||||| |||||||||||| || ||| ||  ||| |||| || |||| || ||||||  | |||||||| |||||||| |    
T  6411834 ggtgcactaaagctcccgcatacgcaaggtctgggaaggggtcccatca--tttggtgtattgtacgcagccttaccctg-tttttacacaagaggctgt 6411930  T
Q  284 ttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccctc 355  Q
    || ||| |||| ||||| |||| | ||||| ||||||| ||||||||||||||| || ||||||||||||||    
T  6411931 ttacaagacttgaacccatgacctatcagttacatgacaacaactttaccagttgcgtcaaggttacccctc 6412002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 184 - 355
Target Start/End: Complemental strand, 22609910 - 22609743
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctat 283  Q
    |||||||| ||||||||||||||||| |||| ||||||| || |||||||||   |||| || |||| || ||||||  |||||| ||| |||||||| |    
T  22609910 ggtgcactgaagctcccgcatacgcaaggtccgggaaggggtcccaccatttg--gtgtattgtacgcagccttaccctgttttt-acacaagaggctgt 22609814  T
Q  284 ttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccctc 355  Q
    |||||| |||| ||||||| || || |||||||||||| ||||||||||| ||| |||||||||||||||||    
T  22609813 ttccaagacttgaacccgttaccttacagtcacatgacaacaactttacc-gttgcgccaaggttacccctc 22609743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 184 - 321
Target Start/End: Complemental strand, 516557 - 516419
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttg-tgtgttatacgtagtcttacctagttttttacaaaagaggcta 282  Q
    ||||||||||||||||||||||||||||||| ||||||| || || |||||||||| | | || | || || ||||||  |||||||||| ||||||||     
T  516557 ggtgcactaaagctcccgcatacgcagggtcggggaaggggtcccgccattttttggtttattgtgcgcagccttaccctgttttttacacaagaggctg 516458  T
Q  283 tttccaaaacttaaacccgtgacatttcagtcacatgac 321  Q
    ||||||  |||| |||||||||| |||||||||||||||    
T  516457 tttccaggacttgaacccgtgacctttcagtcacatgac 516419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 265 - 355
Target Start/End: Original strand, 10870042 - 10870132
Alignment:
Q  265 tttttacaaaagaggctatttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccctc 355  Q
    |||||||| |||||||| ||||||  |||| |||||||||| ||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  10870042 tttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacccctc 10870132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 184 - 356
Target Start/End: Original strand, 52926231 - 52926392
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctat 283  Q
    ||||| ||||||||||||||||||||||||| ||||||| || |||||||||   |||| || |||| || |||||         |||| |||||||| |    
T  52926231 ggtgcgctaaagctcccgcatacgcagggtccgggaaggtgtcccaccatttg--gtgtattgtacgcagccttac---------tacacaagaggctgt 52926319  T
Q  284 ttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccctcg 356  Q
    |||||  |||| |||||||||| || |||||||||||| ||||||||||||||| ||||||||||||||||||    
T  52926320 ttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgccaaggttacccctcg 52926392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 184 - 355
Target Start/End: Original strand, 5173731 - 5173902
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctat 283  Q
    |||||||||||||||||||||||||| |||| ||||||| |  ||||||||||| |||| ||  | | |  ||||| | |||||| ||| |||||| | |    
T  5173731 ggtgcactaaagctcccgcatacgcaaggtccgggaaggggccccaccatttttggtgtattgcatgcaaccttactttgttttt-acacaagaggttgt 5173829  T
Q  284 ttccaaaacttaaacccgtgacatttcagtcacatgaccacaac-tttaccagttacgccaaggttacccctc 355  Q
    |||||  |||| |||||||||| ||||||||||||||| ||||| ||||| |||| |||||||||||||||||    
T  5173830 ttccaggacttgaacccgtgacctttcagtcacatgacaacaacttttacgagttgcgccaaggttacccctc 5173902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 184 - 355
Target Start/End: Original strand, 12914047 - 12914216
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctat 283  Q
    |||||| | ||||||||||||| |||||||||||||||| ||  ||||||||   |||| || ||||  | ||||||  |||||||||| |||||||| |    
T  12914047 ggtgcattgaagctcccgcatatgcagggtctgggaaggggtctcaccatttg--gtgtattgtacgccgccttaccctgttttttacacaagaggctgt 12914144  T
Q  284 ttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccctc 355  Q
    |||||  |||| |||  ||||| |||| ||||||| || ||||||||||||||| |||||||||||||||||    
T  12914145 ttccaggacttgaacttgtgacctttcggtcacattacaacaactttaccagttgcgccaaggttacccctc 12914216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 185 - 332
Target Start/End: Original strand, 34420656 - 34420802
Alignment:
Q  185 gtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctatt 284  Q
    |||||||||||||||| |||||||| |||| ||||||| || |||||| |||| |||| |  |||| || ||||||  |||||||||| |||||||| ||    
T  34420656 gtgcactaaagctcccacatacgcaaggtccgggaaggggtcccacca-ttttggtgtatggtacgcagccttaccctgttttttacacaagaggctgtt 34420754  T
Q  285 tccaaaacttaaacccgtgacatttcagtcacatgaccacaactttac 332  Q
    ||||  |||| |||||||||| |||||||||| |||| ||||||||||    
T  34420755 tccaggacttgaacccgtgacctttcagtcacgtgacaacaactttac 34420802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 185 - 355
Target Start/End: Complemental strand, 16735584 - 16735417
Alignment:
Q  185 gtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttt-tacaaaagaggctat 283  Q
    ||||||| ||||| |||||||||||| ||| ||||||| || |||||||||   |||| || |||| || ||||||  |||||| |||||  |||||| |    
T  16735584 gtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttg--gtgtattgtacgcagccttaccctgtttttctacaa--gaggctgt 16735489  T
Q  284 ttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccctc 355  Q
    ||| |  |||| |||||||||| || |||||||||||| ||||||||||||||| |||||||||||||||||    
T  16735488 ttcgaggacttgaacccgtgacgttacagtcacatgacaacaactttaccagttgcgccaaggttacccctc 16735417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 183 - 355
Target Start/End: Complemental strand, 26573273 - 26573104
Alignment:
Q  183 tggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggcta 282  Q
    |||||||||||||||| ||||||||||||||| |||| || || |||||| ||   |||| || |||| || ||||||  |||||||||| | ||||||     
T  26573273 tggtgcactaaagctcacgcatacgcagggtccgggatggggtcccaccaattg--gtgtattgtacgcagccttaccctgttttttacacaggaggctg 26573176  T
Q  283 tttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccctc 355  Q
    ||||||  |||| |||||||||| |||||||||| |||| ||||||||||| ||| |||||||| | ||||||    
T  26573175 tttccaggacttgaacccgtgacctttcagtcacgtgacaacaactttacc-gttgcgccaagggtccccctc 26573104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 192 - 320
Target Start/End: Original strand, 45139497 - 45139624
Alignment:
Q  192 aaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctatttccaaaa 291  Q
    |||| ||||||||||||||| |||||||||| || ||||||||||| |||| || || | || ||||||  || ||||||| |||||| | |||||||||    
T  45139497 aaagttcccgcatacgcagg-tctgggaaggggtcccaccatttttggtgtattgtatgcagccttaccctgtgttttacacaagaggttgtttccaaaa 45139595  T
Q  292 cttaaacccgtgacatttcagtcacatga 320  Q
    ||| |||||||||| ||||||||||||||    
T  45139596 cttgaacccgtgacctttcagtcacatga 45139624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 266 - 355
Target Start/End: Original strand, 7696977 - 7697066
Alignment:
Q  266 ttttacaaaagaggctatttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccctc 355  Q
    ||||||| ||||| || ||||||  |||| |||||||||| ||| ||||||||||| ||||||||||||||| |||||||||||||||||    
T  7696977 ttttacacaagagactgtttccaggacttgaacccgtgaccttttagtcacatgacaacaactttaccagttgcgccaaggttacccctc 7697066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 184 - 355
Target Start/End: Complemental strand, 39203659 - 39203492
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctat 283  Q
    |||||||||||||||||||||| ||| |||| ||||||| || |||||||||   |||| || |||| |  ||||||  |||||  ||| |||||||| |    
T  39203659 ggtgcactaaagctcccgcatatgcaaggtccgggaaggggtcccaccatttg--gtgtattgtacgcaaccttaccctgtttt--acacaagaggctgt 39203564  T
Q  284 ttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccctc 355  Q
    ||| |  |||| |||| ||||| ||||||||||||||| |||||||||| ||||  ||||||||||||||||    
T  39203563 ttcaaggacttgaacctgtgacctttcagtcacatgacaacaactttacaagttgtgccaaggttacccctc 39203492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 263 - 355
Target Start/End: Original strand, 4495753 - 4495845
Alignment:
Q  263 gttttttacaaaagaggctatttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccctc 355  Q
    |||||||||| || ||||||||| ||  |||| |||||||||| || |||||||||||| ||||||||||||||| ||| |||||||||||||    
T  4495753 gttttttacacaataggctattttcaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgcgaaggttacccctc 4495845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 183 - 303
Target Start/End: Original strand, 10795434 - 10795554
Alignment:
Q  183 tggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggcta 282  Q
    ||||||||| ||||||||||||||||||||||  |||||| || ||||||||||| |||| || |||| || ||||||  || ||||||| ||||||||     
T  10795434 tggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctg 10795533  T
Q  283 tttccaaaacttaaacccgtg 303  Q
    ||||||  |||| ||||||||    
T  10795534 tttccaggacttgaacccgtg 10795554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 184 - 342
Target Start/End: Complemental strand, 26869851 - 26869696
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctat 283  Q
    ||||||| |||||||||||||||||| |||| || |||| || |||||||||   |||| || |||| || ||||||  |||||| |||  ||||||| |    
T  26869851 ggtgcaccaaagctcccgcatacgcatggtccggcaaggggtcccaccatttg--gtgtattgtacgcagccttaccctgttttt-acaccagaggctgt 26869755  T
Q  284 ttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgcc 342  Q
    |||||  |||| |||| ||||| ||||||||||||||| ||||||||||||||| ||||    
T  26869754 ttccaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 26869696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 184 - 351
Target Start/End: Original strand, 22122929 - 22123092
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctat 283  Q
    ||||||||| ||||| |||||| |||||||| ||||||| || |||||||||   |||| || |||| || ||||||  |||||  ||| ||||| || |    
T  22122929 ggtgcactagagctctcgcatatgcagggtccgggaaggggtcccaccatttg--gtgtattgtacgcagccttaccctgtttt--acacaagagactgt 22123024  T
Q  284 ttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacc 351  Q
    |||||  |||| |||||| ||| ||||||||||||||| |||| |||||||||  |||||||||||||    
T  22123025 ttccaggacttgaacccgcgacctttcagtcacatgacaacaaatttaccagtggcgccaaggttacc 22123092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 183 - 332
Target Start/End: Complemental strand, 25944616 - 25944468
Alignment:
Q  183 tggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggcta 282  Q
    |||||| ||||||||||| ||||||||||||| ||||||| || |||||| |||| |||| || |||  || ||| || |||||||||||  ||||||      
T  25944616 tggtgcgctaaagctcccacatacgcagggtcagggaaggggtcccacca-ttttggtgtattgtactcagccttgcccagttttttacacgagaggcgg 25944518  T
Q  283 tttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttac 332  Q
    ||||||  |||| ||||| |||| |||||||||| |||| ||||||||||    
T  25944517 tttccaggacttgaacccatgacctttcagtcacgtgacaacaactttac 25944468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 184 - 281
Target Start/End: Original strand, 45786226 - 45786323
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggct 281  Q
    |||||||||||||||| |||| ||||||||| ||||||| || ||||||||||| |||| || |||| || ||||||  |||||||||| ||||||||    
T  45786226 ggtgcactaaagctccagcattcgcagggtccgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgttttttacacaagaggct 45786323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 184 - 333
Target Start/End: Original strand, 53996577 - 53996725
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctat 283  Q
    ||||||||||||||||| ||||||||| ||| ||||||| || |||||| |||| |||| || || | || ||||||  |||||||||| |||||| | |    
T  53996577 ggtgcactaaagctcccacatacgcagtgtcagggaaggggtcccacca-ttttggtgtattgtaagcagccttaccctgttttttacacaagaggttgt 53996675  T
Q  284 ttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttacc 333  Q
    |||||  |||| ||| |||||| ||||||||| ||||| |||| ||||||    
T  53996676 ttccacgacttgaacacgtgacctttcagtcaaatgacaacaaatttacc 53996725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 183 - 355
Target Start/End: Complemental strand, 12525553 - 12525386
Alignment:
Q  183 tggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggcta 282  Q
    ||||||| | ||||||||| |||| |||||||| |||||| || ||||||||||| ||||  |   || || ||||||  | |||||||| ||||||||     
T  12525553 tggtgcagtgaagctcccgtatacacagggtctaggaaggtgtcccaccatttttggtgtactt--cgcagccttaccctgatttttacacaagaggctg 12525456  T
Q  283 tttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccctc 355  Q
    ||||||  |||  |||| ||||| ||||||||| |||||   ||||||||||||| |||||||||||||||||    
T  12525455 tttccaggactcgaacctgtgacctttcagtcatatgac---aactttaccagttgcgccaaggttacccctc 12525386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 264 - 355
Target Start/End: Original strand, 45620919 - 45621009
Alignment:
Q  264 ttttttacaaaagaggctatttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccctc 355  Q
    ||||||||| |||||||| |||||| ||||| |||||||||| |||||||||| |||| ||||||||||| ||| |||||||| | ||||||    
T  45620919 ttttttacacaagaggctgtttccagaacttgaacccgtgacctttcagtcacgtgacaacaactttacc-gttgcgccaaggctccccctc 45621009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 247 - 329
Target Start/End: Complemental strand, 39212074 - 39211992
Alignment:
Q  247 tacgtagtcttacctagttttttacaaaagaggctatttccaaaacttaaacccgtgacatttcagtcacatgaccacaactt 329  Q
    |||| |||||||||| ||| |||||| |||||| ||||||||  |||| ||||||||||||||||||||||| || |||||||    
T  39212074 tacgcagtcttaccttgttatttacacaagaggttatttccaggacttgaacccgtgacatttcagtcacataacgacaactt 39211992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 184 - 288
Target Start/End: Complemental strand, 54484836 - 54484733
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctag-ttttttacaaaagaggcta 282  Q
    ||||||||||||||||||||||||||||||| ||||||| || ||||||  ||| |||| || |||| || ||||||| | ||||||||| ||||||||     
T  54484836 ggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccacca--tttggtgtattgtacgcagccttaccttgtttttttacacaagaggctg 54484739  T
Q  283 tttcca 288  Q
    ||||||    
T  54484738 tttcca 54484733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 184 - 289
Target Start/End: Original strand, 49013485 - 49013590
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctat 283  Q
    ||||||||||||||||||| || || ||||| ||||||| || |||||||| || |||| || |||| || ||||||  |||||||||| |||||||| |    
T  49013485 ggtgcactaaagctcccgcgtatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaagaggctgt 49013584  T
Q  284 ttccaa 289  Q
    ||||||    
T  49013585 ttccaa 49013590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 183 - 316
Target Start/End: Original strand, 54374356 - 54374488
Alignment:
Q  183 tggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggcta 282  Q
    ||||| ||||||||||||||||| |||||||| ||||||| || |||||| |||| |||  || |||| || ||||||   ||||||||| |||||| |     
T  54374356 tggtgaactaaagctcccgcatatgcagggtccgggaaggggtcccacca-ttttggtggattgtacgcagccttaccctattttttacacaagaggttg 54374454  T
Q  283 tttccaaaacttaaacccgtgacatttcagtcac 316  Q
    ||||||| |||| |||| ||||| ||||||||||    
T  54374455 tttccaagacttgaacctgtgacctttcagtcac 54374488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 185 - 328
Target Start/End: Complemental strand, 7943134 - 7942993
Alignment:
Q  185 gtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctatt 284  Q
    ||||||||||||||||||||||||| ||||||| ||||  | |||||||||  ||| |  | |||| |||||||||  |||||||| | |||| ||| ||    
T  7943134 gtgcactaaagctcccgcatacgcatggtctggaaagggatcccaccatttgatgtat--tgtacgcagtcttaccctgttttttagacaagatgctgtt 7943037  T
Q  285 tccaaaacttaaacccgtgacatttcagtcacatgaccacaact 328  Q
    ||||  |||| || ||||||| || |||||||||||| ||||||    
T  7943036 tccaggacttgaatccgtgaccttccagtcacatgacaacaact 7942993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 184 - 288
Target Start/End: Complemental strand, 14987104 - 14987000
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctat 283  Q
    |||||||||||||||||||||| ||| |||| ||||| | || |||||||| || |||| || |||| || ||||||  |||||||||| |||||||| |    
T  14987104 ggtgcactaaagctcccgcatatgcaaggtccgggaatgggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaagaggctgt 14987005  T
Q  284 ttcca 288  Q
    |||||    
T  14987004 ttcca 14987000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 255 - 321
Target Start/End: Original strand, 30928228 - 30928294
Alignment:
Q  255 cttacctagttttttacaaaagaggctatttccaaaacttaaacccgtgacatttcagtcacatgac 321  Q
    ||||||| |||||||||| |||||||| ||||||  |||| |||||||||| |||||||||||||||    
T  30928228 cttaccttgttttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgac 30928294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 184 - 333
Target Start/End: Original strand, 44403567 - 44403715
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctat 283  Q
    |||||||||||||| | ||||||| |||||| ||||||| || |||||||||| || || || | || || ||||||| || ||||||| ||||||||||    
T  44403567 ggtgcactaaagcttcagcatacgtagggtccgggaaggggtcccaccattttgtg-gtattctccgcagccttaccttgtcttttacacaagaggctat 44403665  T
Q  284 ttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttacc 333  Q
    | |||  |||| |||| ||||| ||| || ||| |||| | |||||||||    
T  44403666 tcccaggactttaacctgtgaccttttagccacgtgacaataactttacc 44403715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 184 - 272
Target Start/End: Original strand, 353361 - 353449
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttaca 272  Q
    |||||||||||||||||||||| || ||||| ||||||| || |||||||| || |||| || |||| || ||||||  ||||||||||    
T  353361 ggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttaca 353449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 184 - 354
Target Start/End: Original strand, 25517182 - 25517353
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagtttttt-acaaaagaggcta 282  Q
    |||||||||||||||| ||||||||||| || ||||||| || ||||||||||  |||| || |||| || | || || ||||||| ||| |||||| |     
T  25517182 ggtgcactaaagctccagcatacgcaggatccgggaaggggtcccaccatttt--gtgtattgtacgcagccatatcttgtttttttacacaagaggatg 25517279  T
Q  283 tttccaaaactta--aacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccct 354  Q
    ||||||   |  |  | || ||||| || |||||||||||| ||||||||||||||| ||||||||||| ||||    
T  25517280 tttccaggtcccatcatcctgtgaccttccagtcacatgacaacaactttaccagttgcgccaaggttatccct 25517353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 184 - 235
Target Start/End: Complemental strand, 31592992 - 31592941
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattt 235  Q
    ||||||||| |||||||||||| |||||||| |||||||||| |||||||||    
T  31592992 ggtgcactagagctcccgcatatgcagggtccgggaaggagtcccaccattt 31592941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 333
Target Start/End: Complemental strand, 19731147 - 19731000
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctat 283  Q
    |||||||||||||||| |||||| ||| ||||||||| | || |||||| |    |||| || |||| |  ||||||| |||||||||| ||||||||||    
T  19731147 ggtgcactaaagctcctgcatacacagagtctgggaaagggtcccaccaatag--gtgtattgtacgcaaccttaccttgttttttacacaagaggctat 19731050  T
Q  284 ttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttacc 333  Q
    |||||  ||||  | ||||||| ||||| |||| |||| |||| ||||||    
T  19731049 ttccaggacttgcatccgtgacctttcaatcacgtgacaacaaatttacc 19731000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 236
Target Start/End: Original strand, 829454 - 829506
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccatttt 236  Q
    |||||||||||||||| |||||||||||||  ||||||| || ||||||||||    
T  829454 ggtgcactaaagctcctgcatacgcagggttcgggaaggggtcccaccatttt 829506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 235
Target Start/End: Complemental strand, 10300629 - 10300585
Alignment:
Q  191 taaagctcccgcatacgcagggtctgggaaggagttccaccattt 235  Q
    ||||||||||||||||| ||||||||||||||||| ||| |||||    
T  10300629 taaagctcccgcatacgtagggtctgggaaggagtcccatcattt 10300585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 188 - 320
Target Start/End: Complemental strand, 33926224 - 33926094
Alignment:
Q  188 cactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctatttcc 287  Q
    ||||||||||| |||||| ||||||||  |||||| || |||||||| |  |||| || |||  || ||||||  |||||| ||| ||||||||||||||    
T  33926224 cactaaagctctcgcatatgcagggtccaggaaggggtcccaccattatg-gtgtattgtacacagccttaccctgttttt-acacaagaggctatttcc 33926127  T
Q  288 aaaacttaaacccgtgacatttcagtcacatga 320  Q
    |  |||| ||||| |||| ||||||||||||||    
T  33926126 aggacttgaacccatgacctttcagtcacatga 33926094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 232
Target Start/End: Original strand, 45948850 - 45948898
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccacca 232  Q
    ||||||||||||||||||||||||||||||| | ||||| || ||||||    
T  45948850 ggtgcactaaagctcccgcatacgcagggtccgagaaggggtcccacca 45948898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 220
Target Start/End: Complemental strand, 47624244 - 47624208
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaa 220  Q
    ||||||||||||||||||||||||||||||| |||||    
T  47624244 ggtgcactaaagctcccgcatacgcagggtccgggaa 47624208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 309 - 352
Target Start/End: Complemental strand, 21875042 - 21874999
Alignment:
Q  309 tcagtcacatgaccacaactttaccagttacgccaaggttaccc 352  Q
    ||||||||||||| ||||||||||||||| || |||||||||||    
T  21875042 tcagtcacatgacaacaactttaccagttgcgtcaaggttaccc 21874999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 184 - 235
Target Start/End: Original strand, 24851313 - 24851364
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattt 235  Q
    |||||||||||||||||||||| ||||| || ||||||| || |||||||||    
T  24851313 ggtgcactaaagctcccgcatatgcaggatccgggaaggggtcccaccattt 24851364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 184 - 235
Target Start/End: Original strand, 34771376 - 34771427
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattt 235  Q
    ||||||||| |||||||||||| |||||||| ||||||| || |||||||||    
T  34771376 ggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccattt 34771427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 184 - 214
Target Start/End: Original strand, 4495688 - 4495718
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtc 214  Q
    |||||||||||||||||||||||||||||||    
T  4495688 ggtgcactaaagctcccgcatacgcagggtc 4495718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 184 - 214
Target Start/End: Original strand, 10484628 - 10484658
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtc 214  Q
    |||||||||||||||||||||||||||||||    
T  10484628 ggtgcactaaagctcccgcatacgcagggtc 10484658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 263 - 333
Target Start/End: Complemental strand, 53062106 - 53062036
Alignment:
Q  263 gttttttacaaaagaggctatttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttacc 333  Q
    |||||| ||| | |||||| ||||||  |||| ||| |||||| ||||||||||||||| |||||||||||    
T  53062106 gtttttgacacaggaggctgtttccaggacttgaacacgtgacctttcagtcacatgacaacaactttacc 53062036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 184 - 214
Target Start/End: Original strand, 54032583 - 54032613
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtc 214  Q
    |||||||||||||||||||||||||||||||    
T  54032583 ggtgcactaaagctcccgcatacgcagggtc 54032613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 337
Target Start/End: Original strand, 11461731 - 11461804
Alignment:
Q  264 ttttttacaaaagaggctatttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagtt 337  Q
    ||||||||| || || ||||||||| |||||||||| || || || | |||| ||||| |||||||||||||||    
T  11461731 ttttttacacaaaagactatttccagaacttaaacctgtaaccttcctgtcatatgacaacaactttaccagtt 11461804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 213
Target Start/End: Complemental strand, 40390386 - 40390357
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggt 213  Q
    ||||||||||||||||||||||||||||||    
T  40390386 ggtgcactaaagctcccgcatacgcagggt 40390357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 281
Target Start/End: Complemental strand, 55401314 - 55401226
Alignment:
Q  192 aaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggct 281  Q
    |||||||||||||||| | |||| | ||||| || |||||| |||| |||| ||||||| ||||||| |  |||||||||| ||||||||    
T  55401314 aaagctcccgcatacggaaggtccgagaaggggtcccacca-ttttggtgtattatacgcagtcttaacctgttttttacacaagaggct 55401226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 185 - 213
Target Start/End: Original strand, 14266385 - 14266413
Alignment:
Q  185 gtgcactaaagctcccgcatacgcagggt 213  Q
    |||||||||||||||||||||||||||||    
T  14266385 gtgcactaaagctcccgcatacgcagggt 14266413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 184 - 232
Target Start/End: Complemental strand, 30452940 - 30452892
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccacca 232  Q
    ||||||||| |||||||||||| |||||||| ||||||| || ||||||    
T  30452940 ggtgcactagagctcccgcatatgcagggtccgggaaggggtcccacca 30452892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 96; Significance: 6e-47; HSPs: 57)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 184 - 355
Target Start/End: Complemental strand, 14530443 - 14530272
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctat 283  Q
    ||||||||||||||||||||||||||||||| ||||||| || |||||||| || |||| || ||||||| ||||||  |||||||| | |||||||| |    
T  14530443 ggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgtagccttaccctgttttttatacaagaggctgt 14530344  T
Q  284 ttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccctc 355  Q
    |||||  |||| |||||||||| ||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  14530343 ttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacccctc 14530272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 184 - 354
Target Start/End: Complemental strand, 10543823 - 10543653
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctat 283  Q
    ||||||||||||||||||||||||||||||| ||||||| || ||||||||||| |||| || |||| || ||||||  |||||||||| |||||||  |    
T  10543823 ggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgttttttacacaagaggccgt 10543724  T
Q  284 ttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccct 354  Q
    |||||  |||| |||||||||| ||||||||||||||| ||||||||| ||||| ||||||||||||||||    
T  10543723 ttccaggacttgaacccgtgacctttcagtcacatgacaacaactttatcagttgcgccaaggttacccct 10543653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 184 - 353
Target Start/End: Complemental strand, 11514558 - 11514392
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctat 283  Q
    ||||||||||||||||||||||||||||||||||||||| || |||||||||   |||| || |||| || ||||| | |||||||||| |||||||| |    
T  11514558 ggtgcactaaagctcccgcatacgcagggtctgggaagg-gtcccaccatttg--gtgtattgtacgcagccttactttgttttttacacaagaggctgt 11514462  T
Q  284 ttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccc 353  Q
    |||||  | || |||||||||| || |||||||||||| ||||||||||||||| |||||||||||||||    
T  11514461 ttccaggagttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgccaaggttacccc 11514392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 184 - 355
Target Start/End: Original strand, 8455328 - 8455497
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctat 283  Q
    |||||||||||||||| |||||||||||||| ||||||| || |||||||||   |||| || |||| || ||||||  || ||||||| |||||||| |    
T  8455328 ggtgcactaaagctccggcatacgcagggtccgggaaggggtcccaccatttg--gtgtattgtacgcagccttaccctgtgttttacacaagaggctgt 8455425  T
Q  284 ttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccctc 355  Q
    |||||  |||| |||||||||| || |||||||||||| ||||||||||||||| |||||||||||||||||    
T  8455426 ttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgccaaggttacccctc 8455497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 184 - 354
Target Start/End: Original strand, 24200635 - 24200805
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctat 283  Q
    ||||||||||||||| | ||||| ||||||| |||||||  | ||||||||||| |||| || |||| || ||||||  |||||||||| |||||||| |    
T  24200635 ggtgcactaaagctctcacatactcagggtccgggaagggttcccaccatttttggtgtattgtacgcagccttaccctgttttttacacaagaggctgt 24200734  T
Q  284 ttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccct 354  Q
    |||||  |||| |||||||||| ||||||||||||||| ||||||||||||||| |  |||||||||||||    
T  24200735 ttccaggacttgaacccgtgacttttcagtcacatgacaacaactttaccagttgcatcaaggttacccct 24200805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 184 - 356
Target Start/End: Complemental strand, 9671302 - 9671133
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctat 283  Q
    ||||||||||||||||||||||||||||||| ||||||| || |||||||||   |||| || |||| || ||||||  |||||  ||| |||||||| |    
T  9671302 ggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttg--gtgtattgtacgcagccttaccctgtttt--acacaagaggctgt 9671207  T
Q  284 ttccaaaacttaaacccgtgacatttc-agtcacatgaccacaactttaccagttacgccaaggttacccctcg 356  Q
    |||||  | || ||||||||||||||| ||||||||||| ||||||||||| ||| ||||||||||||||||||    
T  9671206 ttccaggatttgaacccgtgacatttccagtcacatgacaacaactttaccggttgcgccaaggttacccctcg 9671133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 183 - 355
Target Start/End: Complemental strand, 7214660 - 7214488
Alignment:
Q  183 tggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggcta 282  Q
    |||||||||||| ||| ||||||||||| ||| | |||||  |  ||||||||||||||| || |||| || ||||||  || ||||||| ||||| ||     
T  7214660 tggtgcactaaaactctcgcatacgcagtgtccgagaagggatctcaccattttttgtgtattgtacgcagccttaccctgtattttacacaagagactg 7214561  T
Q  283 tttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccctc 355  Q
    ||||||| |||| ||||| |||| ||||||||||||||| |||||||||||||||  ||||| ||||||||||    
T  7214560 tttccaagacttgaacccatgacctttcagtcacatgacaacaactttaccagttgtgccaaagttacccctc 7214488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 180 - 354
Target Start/End: Complemental strand, 14544193 - 14544018
Alignment:
Q  180 acttggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttt-tacaaaagag 278  Q
    |||||||||||||||||||||||||||||||||||  |||||| || | |||||||||||  | ||  ||| |||||||||  |||||| |||| |||||    
T  14544193 acttggtgcactaaagctcccgcatacgcagggtcccggaaggggtccgaccattttttggttattgcacgcagtcttaccctgtttttctacacaagag 14544094  T
Q  279 gctatttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccct 354  Q
    ||| ||||||  || |  ||| || || ||||||||||||||| |||||||||||| || ||||||||||||||||    
T  14544093 gctgtttccagtacctggacctgtaacctttcagtcacatgacaacaactttaccaattgcgccaaggttacccct 14544018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 184 - 355
Target Start/End: Original strand, 25079729 - 25079899
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagtttttt-acaaaagaggcta 282  Q
    |||||||||||||||  |||||||||||||| ||||||| || ||||||||    |||| || |||| |  ||||||| ||||||| ||| |||||| |     
T  25079729 ggtgcactaaagctcttgcatacgcagggtccgggaaggggtcccaccattcg--gtgtattgtacgcatccttaccttgtttttttacacaagaggttg 25079826  T
Q  283 tttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccctc 355  Q
    |||| || |||| |||||||||| || |||||||||||| ||||||||||||||| |||||||||||||||||    
T  25079827 tttctaagacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgccaaggttacccctc 25079899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 184 - 355
Target Start/End: Original strand, 12023931 - 12024099
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctat 283  Q
    |||||| ||||||| ||  |||||||||||| |||| || || |||||||||   |||| || |||| || ||||||  |||||| ||| |||||||| |    
T  12023931 ggtgcattaaagcttccaaatacgcagggtccgggagggggtcccaccatttg--gtgtattgtacgcagccttaccctgttttt-acacaagaggctgt 12024027  T
Q  284 ttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccctc 355  Q
    |||||  |||| |||||||||| ||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  12024028 ttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacccctc 12024099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 183 - 353
Target Start/End: Original strand, 19977725 - 19977893
Alignment:
Q  183 tggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtctta-cctagttttttacaaaagaggct 281  Q
    |||||||||||||||||||||||| || |||  |||||||  | |||||||||   |||| || |||| |  |||| |||| ||||||||||||||||||    
T  19977725 tggtgcactaaagctcccgcatacacaaggttcgggaagggatcccaccatttg--gtgtattgtacgcaaccttatccta-ttttttacaaaagaggct 19977821  T
Q  282 atttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccc 353  Q
     |||||| ||||| |||||||||| |||| |||||||||| ||||||| ||||||| |||||||||||||||    
T  19977822 gtttccagaacttgaacccgtgacctttcggtcacatgacaacaacttcaccagttccgccaaggttacccc 19977893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 184 - 331
Target Start/End: Original strand, 31158451 - 31158598
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctat 283  Q
    |||| |||||||||||||||||||||||||||||||||| || ||||||||||| || | || || | | |||||||  |||||||||  |||||||| |    
T  31158451 ggtgtactaaagctcccgcatacgcagggtctgggaaggggtcccaccatttttggtttattgtatgcaatcttaccctgttttttacgcaagaggctgt 31158550  T
Q  284 ttccaaaacttaaacccgtgacatttcagtcacatgaccacaacttta 331  Q
    ||  || |||| ||||| |||| ||||||||||||||| |||||||||    
T  31158551 tttgaagactttaacccttgacctttcagtcacatgacaacaacttta 31158598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 184 - 355
Target Start/End: Original strand, 21779273 - 21779440
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctat 283  Q
    ||||||||| |||||||||||| |||||||| ||||||| || |||||||||   |||| || |||| |  ||||||  |||||  ||| |||||||| |    
T  21779273 ggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttg--gtgtattgtacgcaaccttaccctgtttt--acacaagaggctgt 21779368  T
Q  284 ttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccctc 355  Q
     ||||  |||| |||||||||| ||||||||||||||| ||||||| ||||||| |||||||||||||||||    
T  21779369 ctccaggacttgaacccgtgacctttcagtcacatgacaacaacttcaccagttgcgccaaggttacccctc 21779440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 184 - 355
Target Start/End: Complemental strand, 23397887 - 23397720
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctat 283  Q
    ||||||||| |||||||||||| | |||||| | ||||| || |||||||||   |||| || ||||||| ||||||   | ||||||| |||||||| |    
T  23397887 ggtgcactagagctcccgcatatgtagggtccgagaaggggtcccaccatttg--gtgtattgtacgtagccttaccc--tattttacacaagaggctgt 23397792  T
Q  284 ttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccctc 355  Q
    |||||  |||| ||||| |||| ||||||||||||||| ||||||||||||||| | |||||||||||||||    
T  23397791 ttccaggacttgaacccatgacctttcagtcacatgacaacaactttaccagttgcaccaaggttacccctc 23397720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 184 - 356
Target Start/End: Complemental strand, 5841153 - 5840981
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctat 283  Q
    |||||||||||||||||||||| || ||||| ||||||| || |||||||| ||  ||| || |||| |  ||||||   ||||||||| || ||||| |    
T  5841153 ggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattgatgtattgtacgcatccttaccctattttttacacaaaaggctgt 5841054  T
Q  284 ttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccctcg 356  Q
    ||| |  |||| |||||||||| || |||||||||||| ||||||||| || || | ||||||||||||||||    
T  5841053 ttctaggacttgaacccgtgaccttccagtcacatgacaacaactttatcatttgcaccaaggttacccctcg 5840981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 184 - 337
Target Start/End: Complemental strand, 17668125 - 17667974
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctat 283  Q
    |||||||||||||||||  |||||||||||  | ||||| ||||||||||||   |||| || |||| || ||||||  | |||||||| |||||| | |    
T  17668125 ggtgcactaaagctcccatatacgcagggttcgagaaggggttccaccatttg--gtgtattgtacgcagccttaccctgatttttacacaagaggttct 17668028  T
Q  284 ttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagtt 337  Q
    |||||  |||| |||||||||| || |||||||||||| |||||||||||||||    
T  17668027 ttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagtt 17667974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 186 - 353
Target Start/End: Complemental strand, 17896381 - 17896215
Alignment:
Q  186 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacc-tagttttttacaaaagaggctatt 284  Q
    ||||||||||||||| ||||||||||||| | ||||| || |||||||||   || | || |||| || |||||| || ||||||||| |||||| | ||    
T  17896381 tgcactaaagctcccacatacgcagggtccgagaaggggtcccaccatttg--gtatattgtacgcagccttaccctatttttttacacaagaggttgtt 17896284  T
Q  285 tccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccc 353  Q
    || |  |||| || ||||||| |||| |||||||||| ||||||||||||||| || ||||||||||||    
T  17896283 tctaggacttgaatccgtgacctttcggtcacatgacaacaactttaccagttgcgtcaaggttacccc 17896215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 184 - 352
Target Start/End: Original strand, 25249750 - 25249915
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctat 283  Q
    ||||||||||||||| ||||||||||||||  |||||||  | |||||||||   |||| || |||| || ||||||  |||| | ||| ||||| || |    
T  25249750 ggtgcactaaagctcacgcatacgcagggttcgggaagggatcccaccatttg--gtgtattgtacgcagccttaccctgtttgt-acacaagagactgt 25249846  T
Q  284 ttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttaccc 352  Q
    |||||  |||| |||||||||| || |||||||||||| |||||||||||| || ||||||||||||||    
T  25249847 ttccatgacttgaacccgtgaccttacagtcacatgacaacaactttaccaattgcgccaaggttaccc 25249915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 183 - 354
Target Start/End: Original strand, 32781300 - 32781467
Alignment:
Q  183 tggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggcta 282  Q
    |||||||| ||||||||||||||| ||||||||||||||| || ||||||  ||| |||| || |||| |||||||||  |||||||||| |||||| |     
T  32781300 tggtgcac-aaagctcccgcatacacagggtctgggaaggggtcccacca--tttggtgtattgtacgcagtcttaccctgttttttacacaagaggttg 32781396  T
Q  283 tttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccct 354  Q
    ||||| | |||| ||| |||||| ||||||  ||||  | |||||||||||| || |||||||||| |||||    
T  32781397 tttccgagacttgaactcgtgacctttcagcaacattgcaacaactttacca-ttgcgccaaggttccccct 32781467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 188 - 332
Target Start/End: Original strand, 99281 - 99421
Alignment:
Q  188 cactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctatttcc 287  Q
    ||||||||||||||||||| ||||||||| ||||| |||||||||  ||| |||| || |||| || ||| ||  |||||||||  |||||||| ||||     
T  99281 cactaaagctcccgcatacacagggtctgagaaggggttccacca--tttggtgtattgtacgcagccttgccatgttttttac--aagaggctgtttct 99376  T
Q  288 aaaacttaaacccgtgacatttcagtcacatgaccacaactttac 332  Q
    |  |||| |||||||||| |||||||||| |||| ||||||||||    
T  99377 aggacttgaacccgtgacctttcagtcacgtgacaacaactttac 99421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 184 - 318
Target Start/End: Complemental strand, 10546286 - 10546153
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagtttttt-acaaaagaggcta 282  Q
    ||||||||||||||||||||||||||||||| ||||||| || |||||||||   |||| || |||| || ||||||  ||||||| | | |||||| |     
T  10546286 ggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttg--gtgtattgtacgcagccttaccctgtttttttatacaagaggatg 10546189  T
Q  283 tttccaaaacttaaacccgtgacatttcagtcacat 318  Q
    ||||||  |||| |||||||||| ||||||||||||    
T  10546188 tttccaggacttgaacccgtgacctttcagtcacat 10546153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 184 - 334
Target Start/End: Complemental strand, 44643646 - 44643497
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttac-ctagttttttacaaaagaggcta 282  Q
    |||||||||| |||||||||||||||||||||||||||| || ||||||  ||| ||   || |||| || ||||| ||  ||||||||  ||||||||     
T  44643646 ggtgcactaaggctcccgcatacgcagggtctgggaaggggtcccacca--tttggtacattgtacgcagccttactctgtttttttacggaagaggctc 44643549  T
Q  283 tttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttacca 334  Q
    |||| | ||||| ||| |||||| ||||||||||||||  ||||||||||||    
T  44643548 tttctagaacttgaacacgtgacctttcagtcacatgatgacaactttacca 44643497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 267 - 357
Target Start/End: Complemental strand, 17705537 - 17705447
Alignment:
Q  267 tttacaaaagaggctatttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccctcgt 357  Q
    |||||| |||||||  ||||||  |||| |||||||||| ||  ||||||||||| ||||||||||||||| | |||||||||||||||||    
T  17705537 tttacacaagaggcggtttccaggacttgaacccgtgaccttctagtcacatgacaacaactttaccagttgcaccaaggttacccctcgt 17705447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 184 - 242
Target Start/End: Complemental strand, 23488606 - 23488548
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgt 242  Q
    ||||||||||||||| ||||||||||||||| ||||||| || ||||||||||||||||    
T  23488606 ggtgcactaaagctctcgcatacgcagggtccgggaaggggtcccaccattttttgtgt 23488548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 184 - 355
Target Start/End: Original strand, 26684632 - 26684803
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacc-tagttttttacaaaagagg-ct 281  Q
    |||||| |||||||||||||||||||||||  ||||||  || |||||||||   || | || |||| || |||||| || ||||||||| |||||| ||    
T  26684632 ggtgcattaaagctcccgcatacgcagggttcgggaagaggtcccaccattta--gtatattgtacgcagccttaccatatttttttacacaagaggtct 26684729  T
Q  282 atttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccctc 355  Q
     ||| ||  |||||||||  |||| ||||| ||||||||| ||||||||||||||| ||| || ||||||||||    
T  26684730 gttttcaggacttaaacctttgacctttcaatcacatgacaacaactttaccagttgcgctaaagttacccctc 26684803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 180 - 332
Target Start/End: Original strand, 45235825 - 45235976
Alignment:
Q  180 acttggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtctta-cctagttttttacaaaagag 278  Q
    ||||||| |||||||||||| ||||||| ||||||||| |||| || ||||||  |||||||| ||| |||||| |||| |||| | ||||||| |||||    
T  45235825 acttggtacactaaagctcctgcatacgtagggtctggtaaggggtcccacca--ttttgtgtattacacgtagccttaccctattattttacagaagag 45235922  T
Q  279 gctatttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttac 332  Q
     || |||| |  |||| ||| |||||  ||||||||||||||  ||||||||||    
T  45235923 actgtttctaggacttgaactcgtgatctttcagtcacatgagaacaactttac 45235976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 185 - 337
Target Start/End: Complemental strand, 17623686 - 17623536
Alignment:
Q  185 gtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctatt 284  Q
    ||||||||||||| || |||||||||| |  ||||||| ||||||||||||   |||| || |||| || ||||||  | |||||||| |||||| | ||    
T  17623686 gtgcactaaagcttccacatacgcaggattcgggaaggggttccaccatttg--gtgtattgtacgcagccttaccctgatttttacacaagaggttgtt 17623589  T
Q  285 tccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagtt 337  Q
    || |  |||| |||||||||| || ||||| |||||| |||||||||||||||    
T  17623588 tcgaggacttgaacccgtgaccttccagtcgcatgacaacaactttaccagtt 17623536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 183 - 320
Target Start/End: Complemental strand, 19615117 - 19614981
Alignment:
Q  183 tggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggcta 282  Q
    ||||||||||||||||| |||||||||||||  ||||||| | ||||| ||| || || | || |||| |||||||||  |||||||| | |||||| |     
T  19615117 tggtgcactaaagctcctgcatacgcagggttcgggaagg-ggtccactattattggtatattgtacgcagtcttaccctgttttttatacaagaggatg 19615019  T
Q  283 tttccaaaacttaaacccgtgacatttcagtcacatga 320  Q
    |||| |  |||| |||||||||| ||||||||||||||    
T  19615018 tttcaaggacttgaacccgtgacctttcagtcacatga 19614981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 184 - 288
Target Start/End: Original strand, 40762246 - 40762348
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctat 283  Q
    ||||||||||||||||| |||||||||||||  |||| | || ||||||  ||| |||| || ||||||| |||||| ||||||||||| |||||||| |    
T  40762246 ggtgcactaaagctcccacatacgcagggtccaggaaagggtcccacca--tttggtgtattgtacgtagccttacccagttttttacacaagaggctgt 40762343  T
Q  284 ttcca 288  Q
    |||||    
T  40762344 ttcca 40762348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 183 - 235
Target Start/End: Complemental strand, 14444852 - 14444800
Alignment:
Q  183 tggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattt 235  Q
    |||||||||||||||||||||||||||||||| ||||||| || |||||||||    
T  14444852 tggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattt 14444800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 189 - 241
Target Start/End: Original strand, 19185760 - 19185812
Alignment:
Q  189 actaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtg 241  Q
    ||||||||||||||||||||||||||  |||||| ||||||||||||||||||    
T  19185760 actaaagctcccgcatacgcagggtccaggaaggggttccaccattttttgtg 19185812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 186 - 349
Target Start/End: Complemental strand, 27573741 - 27573581
Alignment:
Q  186 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctattt 285  Q
    ||||||||||||||| ||||| |||||| ||||||   ||||||||||||   |||| || |||| || ||||||  |||| | ||| |||||||| ||     
T  27573741 tgcactaaagctcccacatacacagggtttgggaaatggttccaccatttg--gtgtattgtacgcagccttaccatgtttat-acacaagaggctgttg 27573645  T
Q  286 ccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggtta 349  Q
    ||   |||| ||||  |||| ||||||||||||||| ||||||||||||||| |||||||||||    
T  27573644 cccggacttgaaccaatgacctttcagtcacatgacaacaactttaccagttgcgccaaggtta 27573581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 276 - 355
Target Start/End: Complemental strand, 22371090 - 22371011
Alignment:
Q  276 gaggctatttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccctc 355  Q
    |||||| ||||||  |||| |||||||||| |  |||||||||||| |||||||||||||||  ||||||||||||||||    
T  22371090 gaggctgtttccaggacttgaacccgtgacctcccagtcacatgacaacaactttaccagttgggccaaggttacccctc 22371011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 184 - 345
Target Start/End: Original strand, 24860000 - 24860157
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctat 283  Q
    ||||||||||||||||||||||||||||||| | ||||| |||| ||||  ||| |||| || |||| || | |||| |  ||||||||  ||||| | |    
T  24860000 ggtgcactaaagctcccgcatacgcagggtccgagaaggggttctacca--tttggtgtattgtacgcag-cctacc-atgtttttacaccagaggttgt 24860095  T
Q  284 ttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaag 345  Q
    |||||   ||||||||||| || || |||||||||||| |||| |||||||||| |||||||    
T  24860096 ttccagggcttaaacccgtaaccttccagtcacatgacaacaattttaccagttgcgccaag 24860157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 309 - 355
Target Start/End: Original strand, 39189556 - 39189602
Alignment:
Q  309 tcagtcacatgaccacaactttaccagttacgccaaggttacccctc 355  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||||    
T  39189556 tcagtcacatgacaacaactttaccagttgcgccaaggttacccctc 39189602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 183 - 235
Target Start/End: Complemental strand, 30826159 - 30826108
Alignment:
Q  183 tggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattt 235  Q
    ||||||||||||||||||||||| | |||||||||||||| ||||||||||||    
T  30826159 tggtgcactaaagctcccgcatatgtagggtctgggaagg-gttccaccattt 30826108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 31523353 - 31523303
Alignment:
Q  185 gtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattt 235  Q
    ||||||||||||||||||||| ||||||| |||||| | ||||||||||||    
T  31523353 gtgcactaaagctcccgcatatgcagggtttgggaaagggttccaccattt 31523303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 186 - 232
Target Start/End: Complemental strand, 34766376 - 34766330
Alignment:
Q  186 tgcactaaagctcccgcatacgcagggtctgggaaggagttccacca 232  Q
    ||||||||||||||||||||||||||||| ||||||| || ||||||    
T  34766376 tgcactaaagctcccgcatacgcagggtccgggaaggggtcccacca 34766330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 307 - 360
Target Start/End: Original strand, 27466263 - 27466316
Alignment:
Q  307 tttcagtcacatgaccacaactttaccagttacgccaaggttacccctcgttta 360  Q
    ||||||||||||||| ||||||||||||||| |||||| ||||| |||| ||||    
T  27466263 tttcagtcacatgacaacaactttaccagttgcgccaatgttacgcctctttta 27466316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 184 - 233
Target Start/End: Original strand, 40579761 - 40579810
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccat 233  Q
    ||||||||||||||||||||||| ||||||| ||||||| || |||||||    
T  40579761 ggtgcactaaagctcccgcatactcagggtccgggaaggggtcccaccat 40579810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 124926 - 124962
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaa 220  Q
    ||||||||||||||||||||||||||||||| |||||    
T  124926 ggtgcactaaagctcccgcatacgcagggtccgggaa 124962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 220
Target Start/End: Complemental strand, 22371235 - 22371199
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaa 220  Q
    ||||||||||||||||||||||||||||||| |||||    
T  22371235 ggtgcactaaagctcccgcatacgcagggtccgggaa 22371199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 264 - 331
Target Start/End: Complemental strand, 5450330 - 5450263
Alignment:
Q  264 ttttttacaaaagaggctatttccaaaacttaaacccgtgacatttcagtcacatgaccacaacttta 331  Q
    ||||||||| |||||| | ||||||  | || |||||||||| ||||||||||||||| |||||||||    
T  5450330 ttttttacacaagaggttgtttccaggaattgaacccgtgacctttcagtcacatgacaacaacttta 5450263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 183 - 222
Target Start/End: Complemental strand, 8576019 - 8575980
Alignment:
Q  183 tggtgcactaaagctcccgcatacgcagggtctgggaagg 222  Q
    |||||||||||||||||| ||||||||||||| |||||||    
T  8576019 tggtgcactaaagctcccacatacgcagggtccgggaagg 8575980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 263 - 354
Target Start/End: Complemental strand, 17473017 - 17472926
Alignment:
Q  263 gttttttacaaaagaggctatttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccct 354  Q
    |||||||||| || |||||||||| || || | |||||||||| ||||| |||  |||| |||||||||  |||| || |||||||||||||    
T  17473017 gttttttacacaataggctatttctaagacctgaacccgtgacctttcaatcatttgacaacaactttattagttgcgtcaaggttacccct 17472926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 185 - 232
Target Start/End: Complemental strand, 24890533 - 24890486
Alignment:
Q  185 gtgcactaaagctcccgcatacgcagggtctgggaaggagttccacca 232  Q
    ||||||||||||||| |||||||||||||| ||||||| || ||||||    
T  24890533 gtgcactaaagctcctgcatacgcagggtccgggaaggggtcccacca 24890486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 184 - 235
Target Start/End: Complemental strand, 36871614 - 36871564
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattt 235  Q
    |||||||||||||||||||||||||| |||| ||||||| || |||||||||    
T  36871614 ggtgcactaaagctcccgcatacgca-ggtccgggaaggggtcccaccattt 36871564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 264 - 335
Target Start/End: Original strand, 39914396 - 39914467
Alignment:
Q  264 ttttttacaaaagaggctatttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccag 335  Q
    ||||||||| |||||| | ||||||  |||| | |||||||| || |||||||||||| |||||||||||||    
T  39914396 ttttttacacaagaggttgtttccagtacttgatcccgtgaccttccagtcacatgacaacaactttaccag 39914467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 263 - 334
Target Start/End: Original strand, 40416960 - 40417031
Alignment:
Q  263 gttttttacaaaagaggctatttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttacca 334  Q
    |||||||| | |||||| | ||||||  |||| |||||||||| || |||||||||||| ||||||||||||    
T  40416960 gttttttatacaagaggttgtttccatgacttgaacccgtgaccttccagtcacatgacaacaactttacca 40417031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 233
Target Start/End: Complemental strand, 33795400 - 33795359
Alignment:
Q  192 aaagctcccgcatacgcagggtctgggaaggagttccaccat 233  Q
    ||||||||||||||| ||||||||||||||| || |||||||    
T  33795400 aaagctcccgcatacacagggtctgggaaggggtcccaccat 33795359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 233
Target Start/End: Complemental strand, 41409985 - 41409936
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccat 233  Q
    |||||||| ||||||||||||| |||||||| ||||||| || |||||||    
T  41409985 ggtgcactgaagctcccgcatatgcagggtccgggaaggggtcccaccat 41409936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 265 - 338
Target Start/End: Complemental strand, 44604898 - 44604825
Alignment:
Q  265 tttttacaaaagaggctatttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagtta 338  Q
    |||||||| |||||| | ||||||  |||| |||| ||||| || |||||||||||| ||||||||| ||||||    
T  44604898 tttttacacaagaggttgtttccaggacttgaacctgtgaccttccagtcacatgacaacaactttagcagtta 44604825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 184 - 232
Target Start/End: Complemental strand, 34080224 - 34080176
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccacca 232  Q
    ||||||||||| |||||||||| |||||||| ||||||| || ||||||    
T  34080224 ggtgcactaaaactcccgcatatgcagggtccgggaaggggtcccacca 34080176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 291 - 346
Target Start/End: Complemental strand, 35017836 - 35017781
Alignment:
Q  291 acttaaacccgtgacatttca-gtcacatgaccacaactttaccagttacgccaagg 346  Q
    ||||||||||||||| ||||| |||||||||| ||||||||||| ||| ||||||||    
T  35017836 acttaaacccgtgacctttcaagtcacatgacaacaactttacc-gttgcgccaagg 35017781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 183 - 211
Target Start/End: Original strand, 39499241 - 39499269
Alignment:
Q  183 tggtgcactaaagctcccgcatacgcagg 211  Q
    |||||||||||||||||||||||||||||    
T  39499241 tggtgcactaaagctcccgcatacgcagg 39499269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 186 - 214
Target Start/End: Original strand, 39914320 - 39914348
Alignment:
Q  186 tgcactaaagctcccgcatacgcagggtc 214  Q
    |||||||||||||||||||||||||||||    
T  39914320 tgcactaaagctcccgcatacgcagggtc 39914348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 191 - 346
Target Start/End: Original strand, 44521392 - 44521544
Alignment:
Q  191 taaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctatttccaaa 290  Q
    ||||||||||| ||| |||  |||||||||||  | || ||||||   |||| ||||| | || ||||||| |||||||||| |||||  | |||||||     
T  44521392 taaagctcccgtatatgcaatgtctgggaagggctcccgccatttg--gtgtattatatgcagccttaccttgttttttacacaagagattgtttccaag 44521489  T
Q  291 acttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaagg 346  Q
    | || ||| |||||| |||||||||| |||  ||||||||||| ||| ||||||||    
T  44521490 atttgaacgcgtgacctttcagtcacgtgataacaactttacc-gttccgccaagg 44521544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 95; Significance: 2e-46; HSPs: 62)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 188 - 357
Target Start/End: Original strand, 46247969 - 46248136
Alignment:
Q  188 cactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctatttcc 287  Q
    ||||||||||||||||||||||||||| ||||||| || |||||||||   |||| || |||| |||||||||  |||||||||| |||||||| |||||    
T  46247969 cactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttg--gtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttcc 46248066  T
Q  288 aaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccctcgt 357  Q
    || |||| |||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||||    
T  46248067 aagacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgagccaaggttacccctcgt 46248136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 184 - 355
Target Start/End: Original strand, 20004102 - 20004273
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctat 283  Q
    |||||||||||||||||||||| || ||||||||||||| || |||||||| || |||| || |||| || ||||||| ||||||||||  ||||||| |    
T  20004102 ggtgcactaaagctcccgcatatgcggggtctgggaaggggtcccaccattattggtgtattgtacgcagccttaccttgttttttacacgagaggctgt 20004201  T
Q  284 ttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccctc 355  Q
    |||||  |||| |||||||||| || |||||||||||| ||||||||||||||| | |||||||||||||||    
T  20004202 ttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcaccaaggttacccctc 20004273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 184 - 355
Target Start/End: Complemental strand, 18944792 - 18944620
Alignment:
Q  184 ggtgcactaaa-gctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggcta 282  Q
    ||||||||||| |||||||||||||||||||| ||||||| || |||||||| || |||| || |||| || ||||||  |||||||||| ||||||||     
T  18944792 ggtgcactaaaagctcccgcatacgcagggtccgggaaggggtcccaccattgttggtgtattgtacgcagccttaccctgttttttacacaagaggctg 18944693  T
Q  283 tttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccctc 355  Q
    ||||||   ||| |||| ||||| ||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  18944692 tttccaggccttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacccctc 18944620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 186 - 355
Target Start/End: Complemental strand, 27201793 - 27201624
Alignment:
Q  186 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctattt 285  Q
    |||||||||||||||||||||||| |||| ||||||| || ||||||||||| |||| || |||| || ||||||  |||| | ||| |||||||| |||    
T  27201793 tgcactaaagctcccgcatacgcaaggtccgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtttctgacacaagaggctgttt 27201694  T
Q  286 ccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccctc 355  Q
    |||  |||| ||||| |||| ||||||||||||||| |||||||||||| |||||| |||||||||||||    
T  27201693 ccaggacttgaacccatgacctttcagtcacatgacaacaactttaccatttacgctaaggttacccctc 27201624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 184 - 355
Target Start/End: Complemental strand, 10668373 - 10668197
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctat 283  Q
    ||||||||||||||||||||||||||||| | ||||||| || |||||||| || |||| || |||| |  ||||||| |||||||||| |||||||| |    
T  10668373 ggtgcactaaagctcccgcatacgcagggaccgggaaggggtcccaccattattggtgtattgtacgcaaccttaccttgttttttacacaagaggctgt 10668274  T
Q  284 ttccaaaacttaaacccgtgacatttcagtc-----acatgaccacaactttaccagttacgccaaggttacccctc 355  Q
    |||||  |||| |||||||||| ||||||||     ||||||| ||||||||||||||| |||||||||||||||||    
T  10668273 ttccaggacttgaacccgtgacctttcagtcacatcacatgacaacaactttaccagttgcgccaaggttacccctc 10668197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 184 - 349
Target Start/End: Original strand, 30395738 - 30395903
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctat 283  Q
    |||||||||||||||||||||| || ||||| ||||||| || |||||||| || |||| || |||| || ||||||  |||||||||| |||||||| |    
T  30395738 ggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaagaggctgt 30395837  T
Q  284 ttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggtta 349  Q
    |||||  |||| |||||||||| ||  ||||||||||| ||||||||||||||| |||||||||||    
T  30395838 ttccaggacttgaacccgtgaccttaaagtcacatgacaacaactttaccagttgcgccaaggtta 30395903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 186 - 352
Target Start/End: Original strand, 23768334 - 23768498
Alignment:
Q  186 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctattt 285  Q
    ||||||||||||||||||||||||||||||||||||| || ||||||  ||| |||| || |||| || ||||||  |||||||||| |||||||| |||    
T  23768334 tgcactaaagctcccgcatacgcagggtctgggaaggtgtcccacca--tttggtgtattgtacgcagccttaccctgttttttacacaagaggctgttt 23768431  T
Q  286 ccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttaccc 352  Q
    |||  |||| |||| ||||| || |||||||||||| ||||||||||||||| || | |||||||||    
T  23768432 ccatgacttgaacctgtgaccttacagtcacatgacaacaactttaccagttgcgtcgaggttaccc 23768498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 183 - 355
Target Start/End: Original strand, 32632568 - 32632737
Alignment:
Q  183 tggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggcta 282  Q
    ||||||||| ||||||||||||| ||||||| |||||||| || |||||||||   |||| || |||| || ||||||  |||||| ||| ||||||||     
T  32632568 tggtgcactcaagctcccgcatatgcagggtttgggaaggggtcccaccatttg--gtgtattgtacgcagccttaccctgttttt-acacaagaggctg 32632664  T
Q  283 tttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccctc 355  Q
    ||||||  |||| |||||||||| ||||||||| ||||| ||||||||||||||| |||||||||||||||||    
T  32632665 tttccaggacttgaacccgtgacctttcagtcatatgacaacaactttaccagttgcgccaaggttacccctc 32632737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 184 - 355
Target Start/End: Original strand, 34725110 - 34725277
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctat 283  Q
    ||||||||| |||||||||||| |||||||| ||||||| || |||||||||   |||| || |||| || ||||||  |||||  ||| |||||||| |    
T  34725110 ggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccattta--gtgtattgtacgcagccttaccctgtttt--acacaagaggctgt 34725205  T
Q  284 ttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccctc 355  Q
    |||||  |||| |||||||||| ||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  34725206 ttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacccctc 34725277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 184 - 355
Target Start/End: Complemental strand, 14617184 - 14617015
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctat 283  Q
    |||||||||||||||||||||| |||||||| |||||||  | |||||||||   |||| || |||| |  ||||||| ||| |||||| |||||||| |    
T  14617184 ggtgcactaaagctcccgcatatgcagggtccgggaagggatcccaccatttg--gtgtattgtacgcaaccttaccttgttatttacacaagaggctgt 14617087  T
Q  284 ttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccctc 355  Q
    |||||  |||| ||| |||||| ||||||||||||||| ||||||||||| ||| |||||||||||||||||    
T  14617086 ttccaggacttgaactcgtgacctttcagtcacatgacaacaactttaccggttgcgccaaggttacccctc 14617015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 184 - 350
Target Start/End: Original strand, 18741969 - 18742137
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttt---tacaaaagaggc 280  Q
    ||||||||||||||| ||||||||||||||||||||||| || ||||||||||| |||| || |||| || ||||||  ||||||   |||||||||  |    
T  18741969 ggtgcactaaagctctcgcatacgcagggtctgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtttttttatacaaaaga--c 18742066  T
Q  281 tattt-ccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttac 350  Q
    | ||| |||| | || ||||| |||| ||||||||||||||| ||||||||||||||| ||||||||||||    
T  18742067 tgtttcccaagatttgaacccttgacctttcagtcacatgacaacaactttaccagttgcgccaaggttac 18742137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 183 - 332
Target Start/End: Complemental strand, 19701718 - 19701570
Alignment:
Q  183 tggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggcta 282  Q
    |||||||||||||||||||||||||||||||| ||||||| |  ||||||||||  |||| || |||  |  |||||| ||||||||||| ||||||||     
T  19701718 tggtgcactaaagctcccgcatacgcagggtccgggaaggggccccaccattttg-gtgtattgtacccatccttaccaagttttttacacaagaggctg 19701620  T
Q  283 tttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttac 332  Q
    ||| ||  ||||||||||||||||||||||||||| ||| ||||||||||    
T  19701619 ttttcatgacttaaacccgtgacatttcagtcacacgacaacaactttac 19701570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 184 - 355
Target Start/End: Complemental strand, 46991950 - 46991781
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctat 283  Q
    ||||||||||||||||| ||||||||||||| ||||||| || ||||||||    |||| || |||  || ||||||  |||||||||| |||||| | |    
T  46991950 ggtgcactaaagctcccacatacgcagggtccgggaaggggtcccaccattcg--gtgtattgtacacagccttaccctgttttttacacaagaggttgt 46991853  T
Q  284 ttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccctc 355  Q
    |||||  |||| |||||||||| || |||||||||||| ||||||||||||||| | |||||||||||||||    
T  46991852 ttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcaccaaggttacccctc 46991781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 184 - 316
Target Start/End: Complemental strand, 35005271 - 35005139
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctat 283  Q
    ||||||||||||| ||||||||||||||||| ||||||| || ||||||||||| |||| || || | || ||||||  |||||||||| |||||||| |    
T  35005271 ggtgcactaaagcgcccgcatacgcagggtccgggaaggggtcccaccatttttggtgtattgtatgcagccttaccctgttttttacacaagaggctgt 35005172  T
Q  284 ttccaaaacttaaacccgtgacatttcagtcac 316  Q
    || ||| |||| |||||||||| ||||||||||    
T  35005171 tttcaagacttgaacccgtgacctttcagtcac 35005139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 184 - 333
Target Start/End: Original strand, 35117777 - 35117927
Alignment:
Q  184 ggtgcactaaagctcccgcat-acgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggcta 282  Q
    |||||||||||||||| |||| |||||||||| ||||||| || ||| ||||||| |||| || |||  || ||||||  || ||||||| |||||||||    
T  35117777 ggtgcactaaagctcctgcattacgcagggtccgggaaggggtcccatcatttttggtgtattgtacacagccttaccctgtattttacacaagaggcta 35117876  T
Q  283 tttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttacc 333  Q
    ||||||  |||| |||||||||| |||||||||| |||| |||||||||||    
T  35117877 tttccaggacttgaacccgtgacctttcagtcacgtgacaacaactttacc 35117927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 183 - 355
Target Start/End: Complemental strand, 47214656 - 47214488
Alignment:
Q  183 tggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggcta 282  Q
    |||||||||| |||||||||||| |||||||||||||||| || |||||||||   |||| || |||| |  ||||||  |||||  |||| |||  ||     
T  47214656 tggtgcactagagctcccgcatatgcagggtctgggaaggggtcccaccatttg--gtgtattgtacgcaaccttaccctgttttaaacaagaga--ctg 47214561  T
Q  283 tttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccctc 355  Q
    ||||||  |||| |||||||||| ||||||||||||||| ||||||||||||||| |||||| ||||||||||    
T  47214560 tttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaagttacccctc 47214488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 184 - 336
Target Start/End: Complemental strand, 6925246 - 6925096
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctat 283  Q
    ||||||||||||||||||||||||||||| | ||||||| || ||||||||    |||| || | || || ||||||   ||||||||| ||||||||||    
T  6925246 ggtgcactaaagctcccgcatacgcagggaccgggaaggggtcccaccattcg--gtgtattgtccgcagccttaccctattttttacacaagaggctat 6925149  T
Q  284 ttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagt 336  Q
    |||||  |||| |||||||||| || |||||||||||| ||||||||||||||    
T  6925148 ttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagt 6925096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 183 - 355
Target Start/End: Original strand, 19932764 - 19932933
Alignment:
Q  183 tggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggcta 282  Q
    ||||||||||| | ||  |||||||||||||| ||||||| || ||||||||||| |||| || |||| || ||||||  |||||||||| || ||| |     
T  19932764 tggtgcactaatgatcttgcatacgcagggtccgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgttttttacacaa-aggttg 19932862  T
Q  283 tttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccctc 355  Q
    | |||||  ||| ||||| |||| ||||||||||||||| ||||||||||||||| ||||||||| |||||||    
T  19932863 tatccaa--cttgaacccatgacctttcagtcacatgacaacaactttaccagttgcgccaaggtaacccctc 19932933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 184 - 355
Target Start/End: Original strand, 38478294 - 38478461
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctat 283  Q
    ||||||||| |||||||||||| |||||||| | ||||| ||||||||||||   |||| || |||| || ||||||  |||||  ||| |||||||| |    
T  38478294 ggtgcactagagctcccgcatatgcagggtccgagaaggggttccaccatttg--gtgtattgtacgcagccttaccctgtttt--acacaagaggctgt 38478389  T
Q  284 ttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccctc 355  Q
    ||| |  |||| |||||||||| ||||||||||||||| |||| ||||| |||| |||||||||||||||||    
T  38478390 ttctaggacttgaacccgtgacctttcagtcacatgacaacaagtttactagttgcgccaaggttacccctc 38478461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 188 - 355
Target Start/End: Complemental strand, 8197185 - 8197020
Alignment:
Q  188 cactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctatttcc 287  Q
    ||||||||||||  ||||||||||||| | ||||| || | |||||||   ||||  | ||||||| ||||||  |||||||||| ||||||| ||| ||    
T  8197185 cactaaagctccaacatacgcagggtccgagaaggggtcctaccatttg--gtgtactgtacgtagccttaccatgttttttacacaagaggcaattacc 8197088  T
Q  288 aaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccctc 355  Q
    |  |||| |||||||||| ||||||||||||||| ||||||| ||||||| | |||||||||||||||    
T  8197087 aggacttgaacccgtgacctttcagtcacatgacaacaacttgaccagttgcaccaaggttacccctc 8197020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 184 - 355
Target Start/End: Complemental strand, 27474426 - 27474258
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctat 283  Q
    ||||||||||||||||||||||||||||||| ||||||| || ||||||||    |||| || |||| ||  || ||  |||||| ||| ||||| || |    
T  27474426 ggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattca--gtgtattgtacgcagctttgccctgttttt-acacaagagactgt 27474330  T
Q  284 ttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccctc 355  Q
    |||||| |||| |||| ||||| ||||||||||||||| |||||||||||||||  || |||||||||||||    
T  27474329 ttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgagctaaggttacccctc 27474258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 185 - 355
Target Start/End: Original strand, 41319819 - 41319987
Alignment:
Q  185 gtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctatt 284  Q
    ||||||| || |||||||||| | |||||  ||||||| || ||| |||||   |||| || |||| || ||||||  |||||||||| ||||| || ||    
T  41319819 gtgcactgaaactcccgcatatgaagggttcgggaaggggtcccatcatttg--gtgtattgtacgcagccttaccctgttttttacacaagagactgtt 41319916  T
Q  285 tccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccctc 355  Q
    ||||  ||||||||| ||||| ||||||||||||||| |||||||||||||||  | ||||||||||||||    
T  41319917 tccaggacttaaacctgtgacctttcagtcacatgacaacaactttaccagttgtgtcaaggttacccctc 41319987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 185 - 349
Target Start/End: Original strand, 12126850 - 12127010
Alignment:
Q  185 gtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctatt 284  Q
    |||||||| |||||||||||| |||||||| ||||||| || |||| ||||   |||| || |||| || ||||||  |||||  ||| |||| ||| ||    
T  12126850 gtgcactacagctcccgcatatgcagggtccgggaaggggtcccacaatttg--gtgtattgtacgcagccttaccctgtttt--acacaagaagctgtt 12126945  T
Q  285 tccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggtta 349  Q
    |||| |||||||||||||||| ||||| | ||||||| |||||||||| |||| |||||||||||    
T  12126946 tccagaacttaaacccgtgacctttcaattacatgacaacaactttacgagttgcgccaaggtta 12127010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 265 - 355
Target Start/End: Original strand, 22930158 - 22930248
Alignment:
Q  265 tttttacaaaagaggctatttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccctc 355  Q
    |||||||| || ||||| ||||||  |||| ||||| |||| ||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  22930158 tttttacacaaaaggctgtttccaggacttgaacccatgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacccctc 22930248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 184 - 351
Target Start/End: Complemental strand, 19414583 - 19414420
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctat 283  Q
    ||||||||| |||||||||||| |||||||  ||||||| || |||||||||   |||| || |||| || |||| |  |||||  ||| |||||||| |    
T  19414583 ggtgcactagagctcccgcatatgcagggtacgggaaggggtcccaccatttg--gtgtattgtacgcagccttaacctgtttt--acataagaggctct 19414488  T
Q  284 ttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacc 351  Q
    ||| |  |||| |||||||||| ||||||||| ||||| |||||||||||| ||||||||||||||||    
T  19414487 ttctaggacttgaacccgtgacctttcagtcatatgacaacaactttaccaattacgccaaggttacc 19414420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 184 - 355
Target Start/End: Original strand, 45812549 - 45812716
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctat 283  Q
    ||||||||| |||||||||||| ||||||| |||||||| || |||||||||   |||| || || | || ||||||   | ||||||| ||||| || |    
T  45812549 ggtgcactagagctcccgcatatgcagggtttgggaaggggtcccaccatttg--gtgtattgtatgcagccttaccc--tcttttacacaagagactgt 45812644  T
Q  284 ttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccctc 355  Q
    || ||  |||| |||| ||||| ||||||||||||||| ||||||||| ||||| |||||||||||||||||    
T  45812645 tttcaggacttgaacctgtgacctttcagtcacatgacaacaactttatcagttgcgccaaggttacccctc 45812716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 184 - 349
Target Start/End: Complemental strand, 9939610 - 9939443
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaa-ggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggcta 282  Q
    ||||||||||||||||||||||||||||||| | ||| || || ||||||||||| |||| ||  ||| |  ||||||  |||| ||| | |||||| |     
T  9939610 ggtgcactaaagctcccgcatacgcagggtccgagaagggggtcccaccatttttggtgtattgcacgcaaccttaccatgtttcttaaacaagaggttg 9939511  T
Q  283 tttccaaaacttaaacccgtgacatttcagtcacatgaccacaac-tttaccagttacgccaaggtta 349  Q
    ||||||  |||| ||| |||||| ||||||||||||||| ||||| |||||| ||| |||||||||||    
T  9939510 tttccaggacttgaactcgtgacctttcagtcacatgacaacaacttttaccggttgcgccaaggtta 9939443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 184 - 350
Target Start/End: Complemental strand, 45402242 - 45402077
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtag-tctt--acctagttttttacaaaagaggc 280  Q
    ||||||||||||||||||||||||||||||||||||||| || ||||||  ||| |||| || |||| ||  |||  |||  | |||||||| |||||||    
T  45402242 ggtgcactaaagctcccgcatacgcagggtctgggaaggggtcccacca--tttggtgtattgtacgcagaacttgaaccctg-tttttacacaagaggc 45402146  T
Q  281 tatttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttac 350  Q
    | ||||||  |||| ||||||| || || || ||||||||| ||||||||||||||| ||||||||||||    
T  45402145 tgtttccaggacttgaacccgttaccttcca-tcacatgacaacaactttaccagttgcgccaaggttac 45402077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 181 - 333
Target Start/End: Original strand, 18724555 - 18724704
Alignment:
Q  181 cttggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggc 280  Q
    |||||||||| |||||||||||||| | |||||| ||||||| || |||  ||||   |||| || |||  || ||||||  |||||||||| |||||||    
T  18724555 cttggtgcac-aaagctcccgcatatgtagggtccgggaaggggtcccaagatttg--gtgtattgtacacagccttaccctgttttttacacaagaggc 18724651  T
Q  281 tatttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttacc 333  Q
    | ||||||  |||| |||||||||| ||||||||||||||| |||||||||||    
T  18724652 tgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttacc 18724704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 263 - 357
Target Start/End: Complemental strand, 25290234 - 25290138
Alignment:
Q  263 gttttttacaaaagaggctat--ttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccctcgt 357  Q
    |||||||||| |||||||| |  |||||| |||| ||| |||||| ||||||||||||||| ||||||||||| ||| |||||||||||||| ||||    
T  25290234 gttttttacacaagaggctgtgtttccaagacttgaacacgtgacctttcagtcacatgacaacaactttacctgttgcgccaaggttacccttcgt 25290138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 247 - 355
Target Start/End: Original strand, 4430099 - 4430207
Alignment:
Q  247 tacgtagtcttacctagttttttacaaaagaggctatttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaagg 346  Q
    |||| |||||||||  |||||||||| ||||  || ||| ||| ||||||||||||||| || |||||||||||| ||||||||||||| | |||||||     
T  4430099 tacgcagtcttaccctgttttttacacaagatactgttttcaagacttaaacccgtgaccttccagtcacatgacaacaactttaccagctgcgccaaga 4430198  T
Q  347 ttacccctc 355  Q
    ||| |||||    
T  4430199 ttaaccctc 4430207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 265 - 345
Target Start/End: Complemental strand, 33223051 - 33222971
Alignment:
Q  265 tttttacaaaagaggctatttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaag 345  Q
    |||||||| |||||||| ||||||  ||||||| ||||||| ||||||||||||||| ||||||||||| ||| |||||||    
T  33223051 tttttacacaagaggctgtttccatgacttaaatccgtgacctttcagtcacatgacaacaactttaccggttgcgccaag 33222971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 291 - 355
Target Start/End: Complemental strand, 34714664 - 34714600
Alignment:
Q  291 acttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccctc 355  Q
    |||| |||||||||| ||||| ||||||||| ||||||||||||||| |||||||||||||||||    
T  34714664 acttgaacccgtgacctttcaatcacatgacaacaactttaccagttgcgccaaggttacccctc 34714600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 184 - 346
Target Start/End: Original strand, 2435798 - 2435958
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctat 283  Q
    ||||||||||||||||||||| || |||||  || |||| || ||||||||||  |||| || |||| || ||||||   ||||| ||| | |||||| |    
T  2435798 ggtgcactaaagctcccgcatgcggagggtacggaaaggggtcccaccattttg-gtgtattgtacgcaggcttaccctatttttcacacaggaggctgt 2435896  T
Q  284 ttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaagg 346  Q
    |||||  |||| |||||||||| |||||||||| |||| ||||||||||| ||| ||||||||    
T  2435897 ttccaggacttgaacccgtgacctttcagtcacgtgacaacaactttacc-gttgcgccaagg 2435958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 192 - 321
Target Start/End: Complemental strand, 11596650 - 11596524
Alignment:
Q  192 aaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctatttccaaaa 291  Q
    |||||||||||||||||||||||  |||||| || |||||||||   |||| ||||||| || ||||||  |||||| ||| |||||| | |||| |  |    
T  11596650 aaagctcccgcatacgcagggtccaggaaggggtcccaccatttg--gtgtattatacgcagccttaccctgttttt-acacaagaggttgtttctagga 11596554  T
Q  292 cttaaacccgtgacatttcagtcacatgac 321  Q
    ||| ||||||||||||||||||||||||||    
T  11596553 cttgaacccgtgacatttcagtcacatgac 11596524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 291 - 353
Target Start/End: Complemental strand, 40424783 - 40424721
Alignment:
Q  291 acttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccc 353  Q
    |||| |||||||| | ||||||||||||||| ||||||||||||||| |||||||||||||||    
T  40424783 acttgaacccgtggcctttcagtcacatgacaacaactttaccagttgcgccaaggttacccc 40424721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 184 - 242
Target Start/End: Original strand, 42304219 - 42304277
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgt 242  Q
    ||||||||||||||||| ||||||||||||| ||||||| || ||||||||||||||||    
T  42304219 ggtgcactaaagctcccacatacgcagggtccgggaaggggtcccaccattttttgtgt 42304277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 183 - 300
Target Start/End: Complemental strand, 22325040 - 22324925
Alignment:
Q  183 tggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggcta 282  Q
    |||||||||||||||||||||||||||||||| |||| || | |||||||||||| |||| || || | || ||||||  | |||||||| ||||||||     
T  22325040 tggtgcactaaagctcccgcatacgcagggtc-gggacggggctccaccatttttggtgtattgtatgcagccttaccctg-tttttacacaagaggctg 22324943  T
Q  283 tttccaaaacttaaaccc 300  Q
    ||||||| |||| |||||    
T  22324942 tttccaagacttgaaccc 22324925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 184 - 235
Target Start/End: Complemental strand, 4349784 - 4349733
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattt 235  Q
    ||||||||||||||||||||||||||||||| ||||||| || |||||||||    
T  4349784 ggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattt 4349733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 185 - 232
Target Start/End: Original strand, 33594144 - 33594191
Alignment:
Q  185 gtgcactaaagctcccgcatacgcagggtctgggaaggagttccacca 232  Q
    |||||||||||||||||||||||||||||||||||||| || ||||||    
T  33594144 gtgcactaaagctcccgcatacgcagggtctgggaaggggtcccacca 33594191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 184 - 242
Target Start/End: Complemental strand, 50606549 - 50606491
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgt 242  Q
    |||||||||||||||||||||| |||||||| ||||||| || ||||||||||| ||||    
T  50606549 ggtgcactaaagctcccgcatatgcagggtccgggaaggggtcccaccatttttggtgt 50606491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 184 - 236
Target Start/End: Original strand, 45264411 - 45264463
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccatttt 236  Q
    |||||||||||||||||||||| |||||||||| ||||| || ||||||||||    
T  45264411 ggtgcactaaagctcccgcatatgcagggtctgagaaggggtcccaccatttt 45264463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 333
Target Start/End: Original strand, 50760291 - 50760385
Alignment:
Q  239 gtgtgttatacgtagtcttacctagttttttacaaaagaggctatttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttacc 333  Q
    |||| ||||||| || |||||| |||||| |||| |||||||| ||| ||  |||| |||||||||| | ||||||||||||| || ||||||||    
T  50760291 gtgtattatacgcagccttacccagttttatacacaagaggctgttttcaggacttgaacccgtgacctctcagtcacatgacaactactttacc 50760385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 264 - 333
Target Start/End: Complemental strand, 52910285 - 52910216
Alignment:
Q  264 ttttttacaaaagaggctatttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttacc 333  Q
    ||||||||  |||||||| ||||||| | || |||| ||||| ||||||||||||||| |||||||||||    
T  52910285 ttttttacctaagaggctgtttccaagagttgaacctgtgacctttcagtcacatgacaacaactttacc 52910216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 232
Target Start/End: Original strand, 1517323 - 1517371
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccacca 232  Q
    |||||||||||||||| |||||||||||||||| ||||| || ||||||    
T  1517323 ggtgcactaaagctcctgcatacgcagggtctgagaaggggtcccacca 1517371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 188 - 236
Target Start/End: Complemental strand, 6358264 - 6358216
Alignment:
Q  188 cactaaagctcccgcatacgcagggtctgggaaggagttccaccatttt 236  Q
    |||||||| ||| |||||||||||||||||||||| || ||||||||||    
T  6358264 cactaaagatcctgcatacgcagggtctgggaaggggtcccaccatttt 6358216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 334
Target Start/End: Complemental strand, 20036355 - 20036218
Alignment:
Q  196 ctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttt-tttacaaaagaggctatttccaaaactt 294  Q
    |||| |||||||||||||| ||||||| ||||||||||||   |||| ||  ||| | |||||||   | | |||||| |||||  | ||||||  ||||    
T  20036355 ctcctgcatacgcagggtccgggaaggggttccaccatttg--gtgtattgaacgcaatcttaccctttctctttacacaagagtttgtttccaggactt 20036258  T
Q  295 aaacccgtgacatttcagtcacatgaccacaactttacca 334  Q
     |||||||||| ||||||||||||||| ||||||||||||    
T  20036257 gaacccgtgacctttcagtcacatgacaacaactttacca 20036218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 240
Target Start/End: Complemental strand, 30682961 - 30682902
Alignment:
Q  180 acttggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgt 240  Q
    ||||||||||| |||||||||||||||||| |||| ||||||| || ||||||||| ||||    
T  30682961 acttggtgcac-aaagctcccgcatacgcacggtccgggaaggggtcccaccatttgttgt 30682902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 318
Target Start/End: Original strand, 35253199 - 35253329
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctat 283  Q
    ||||||||| |||||||||||| |||||||| ||||||| || ||||||  ||| |||| || |||| || ||||||   | ||||||| |||||||| |    
T  35253199 ggtgcactagagctcccgcatatgcagggtccgggaaggggtcccacca--tttggtgtattgtacgcagccttacc--ctgttttacacaagaggctgt 35253294  T
Q  284 ttccaaaacttaaacccgtgacatttcagtcacat 318  Q
    ||| |  |||| |||||||||  ||||||||||||    
T  35253295 ttcgaggacttgaacccgtgatctttcagtcacat 35253329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 188 - 236
Target Start/End: Original strand, 41440618 - 41440666
Alignment:
Q  188 cactaaagctcccgcatacgcagggtctgggaaggagttccaccatttt 236  Q
    ||||||||||||||||||| ||| |||| |||||| |||||||||||||    
T  41440618 cactaaagctcccgcatacacagagtctaggaaggggttccaccatttt 41440666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 232
Target Start/End: Complemental strand, 43768285 - 43768237
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccacca 232  Q
    |||||| ||||||||||| |||||||||||||||||||| || ||||||    
T  43768285 ggtgcattaaagctcccgtatacgcagggtctgggaaggggtcccacca 43768237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 184 - 235
Target Start/End: Original strand, 4587575 - 4587626
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattt 235  Q
    |||||||| ||||||||||||| |||||||| ||||||| || |||||||||    
T  4587575 ggtgcactgaagctcccgcataggcagggtccgggaaggggtcccaccattt 4587626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 184 - 334
Target Start/End: Original strand, 15511160 - 15511311
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttt-tgtgtgttatacgtagtcttacctagttttttacaaaagaggcta 282  Q
    ||||||||||||||| | |||||||||||||  |||||| || ||||||||||  ||| |  ||| || || ||||||  |||||||||| |||||||      
T  15511160 ggtgcactaaagctcacacatacgcagggtccaggaaggggtaccaccattttggtgtattgtatccgcagccttaccctgttttttacacaagaggcgg 15511259  T
Q  283 tttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttacca 334  Q
    ||||||  |||| ||   ||||| |||||| ||||| || ||||||||||||    
T  15511260 tttccaggacttcaatatgtgacctttcagccacattacaacaactttacca 15511311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 263 - 330
Target Start/End: Complemental strand, 22327168 - 22327101
Alignment:
Q  263 gttttttacaaaagaggctatttccaaaacttaaacccgtgacatttcagtcacatgaccacaacttt 330  Q
    |||||||||| |||||| | ||||||  |||| |||||| ||| ||||||||||||||| ||||||||    
T  22327168 gttttttacacaagaggttgtttccaggacttgaacccgcgacctttcagtcacatgacaacaacttt 22327101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 184 - 235
Target Start/End: Complemental strand, 23796611 - 23796560
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattt 235  Q
    |||||||||||||||| ||||| |||||||||||||||| ||  ||||||||    
T  23796611 ggtgcactaaagctccagcatatgcagggtctgggaaggggtctcaccattt 23796560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 184 - 235
Target Start/End: Complemental strand, 30555261 - 30555210
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattt 235  Q
    ||||||||||||||| ||||||||||||||| | ||||| || |||||||||    
T  30555261 ggtgcactaaagctctcgcatacgcagggtccgtgaaggggtcccaccattt 30555210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 184 - 219
Target Start/End: Complemental strand, 35019375 - 35019340
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctggga 219  Q
    ||||||||||||||| ||||||||||||||||||||    
T  35019375 ggtgcactaaagctctcgcatacgcagggtctggga 35019340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 333
Target Start/End: Original strand, 2435983 - 2436052
Alignment:
Q  264 ttttttacaaaagaggctatttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttacc 333  Q
    ||||||||| | |||| | ||||||  |||| |||||||||| |||||||||| |||| |||||||||||    
T  2435983 ttttttacacaggaggttgtttccaggacttgaacccgtgacctttcagtcacgtgacaacaactttacc 2436052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 332
Target Start/End: Original strand, 44485129 - 44485267
Alignment:
Q  192 aaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctatttccaaaa 291  Q
    |||||||||||||||| ||| || ||||||| || | ||||  ||| |||| || |||| || ||||||  || ||||||| ||| || | ||||||  |    
T  44485129 aaagctcccgcatacgtaggatccgggaaggggtccaacca--tttggtgtattgtacgcagccttaccatgtcttttacacaagtggttgtttccagga 44485226  T
Q  292 cttaaacccgtgacatttcagtcacatgaccacaactttac 332  Q
    ||  |||||||||| ||||| ||||||||| ||||||||||    
T  44485227 ctataacccgtgacctttcaatcacatgacaacaactttac 44485267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 310 - 354
Target Start/End: Complemental strand, 21723686 - 21723642
Alignment:
Q  310 cagtcacatgaccacaactttaccagttacgccaaggttacccct 354  Q
    |||||||||||| |||||||||||||||  || ||||||||||||    
T  21723686 cagtcacatgacaacaactttaccagttgtgcgaaggttacccct 21723642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 183 - 235
Target Start/End: Original strand, 28894569 - 28894621
Alignment:
Q  183 tggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattt 235  Q
    |||||||||||||||| |||||| ||||||||| |||||| |||  |||||||    
T  28894569 tggtgcactaaagctctcgcatatgcagggtctaggaaggggttttaccattt 28894621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 184 - 236
Target Start/End: Original strand, 39214970 - 39215022
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccatttt 236  Q
    |||||||||||||| || |||||||||||| |||||||| |  ||||||||||    
T  39214970 ggtgcactaaagcttccacatacgcagggtttgggaaggggacccaccatttt 39215022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 92; Significance: 1e-44; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 184 - 355
Target Start/End: Complemental strand, 38879706 - 38879535
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctat 283  Q
    ||||||||||||||||||||||||||||||| ||||||| || |||||||| || |||| || |||| || ||||||  |||||||| | |||||||| |    
T  38879706 ggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttatacaagaggctgt 38879607  T
Q  284 ttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccctc 355  Q
    |||||  |||| |||||||||| ||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  38879606 ttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacccctc 38879535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 184 - 352
Target Start/End: Original strand, 4619116 - 4619284
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctat 283  Q
    ||||||||||||||| |||||| || ||||| ||||||| || |||||||| || |||| || |||| || ||||||  |||||||||| ||||||||||    
T  4619116 ggtgcactaaagctctcgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaagaggctat 4619215  T
Q  284 ttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttaccc 352  Q
    |||||  |||| |||||||||| || |||||||||||| ||||||||||||||| ||||||||||||||    
T  4619216 ttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgccaaggttaccc 4619284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 184 - 352
Target Start/End: Complemental strand, 43334327 - 43334159
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagtttttt-acaaaagaggcta 282  Q
    ||||||||||||||||||||| ||||||||| ||||||| || ||||||||||| |||| || |||| || ||||||  ||||||| ||| | ||||||     
T  43334327 ggtgcactaaagctcccgcat-cgcagggtccgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtttttttacacaggaggctg 43334229  T
Q  283 tttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttaccc 352  Q
    ||||||  |||| |||||||||| ||||||||||||||| ||||||||||||||| ||||||||||||||    
T  43334228 tttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 43334159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 184 - 355
Target Start/End: Complemental strand, 24449013 - 24448844
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctat 283  Q
    |||||||||||||||| |||||||||||||| ||||||| || |||||||||   |||| || |||| || ||||||   ||||||||| || ||||| |    
T  24449013 ggtgcactaaagctcctgcatacgcagggtccgggaaggggtcccaccatttg--gtgtattgtacgcagccttaccctattttttacacaaaaggctgt 24448916  T
Q  284 ttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccctc 355  Q
    |||||  |||| |||||||||| || |||||||||||| ||||||||||||||| |||||||||||||||||    
T  24448915 ttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgccaaggttacccctc 24448844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 186 - 352
Target Start/End: Complemental strand, 27328875 - 27328709
Alignment:
Q  186 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctattt 285  Q
    |||| |||||||||||||||||||||||  ||||||| || |||||||| || |||| || |||| || ||||||  |||||||||| ||||| || |||    
T  27328875 tgcattaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaagagactgttt 27328776  T
Q  286 ccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttaccc 352  Q
    |||  |||| |||| ||||| ||||||||||||||| |||||||||||| || || |||||||||||    
T  27328775 ccaggacttgaacctgtgacctttcagtcacatgacaacaactttaccaattgcgtcaaggttaccc 27328709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 184 - 355
Target Start/End: Complemental strand, 41014441 - 41014273
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctat 283  Q
    |||||||||||||||||||||| || |||||  |||||| || |||||||||   |||| || |||| || ||||||  |||||| ||| |||||||| |    
T  41014441 ggtgcactaaagctcccgcatatgcggggtccaggaaggggtcccaccatttg--gtgtattgtacgcagccttaccctgttttt-acacaagaggctgt 41014345  T
Q  284 ttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccctc 355  Q
    |||||  |||| |||||||||| || |||||||||||| ||||||||||||||| |||||||||||||||||    
T  41014344 ttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgccaaggttacccctc 41014273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 186 - 355
Target Start/End: Complemental strand, 22187408 - 22187239
Alignment:
Q  186 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctattt 285  Q
    |||||||||||||| ||||| | ||||| |||||||| ||  ||   ||||| |||| || |||| ||||||| |  |||||||||| |||||||| |||    
T  22187408 tgcactaaagctcctgcatatgtagggtttgggaaggggtctcattgtttttggtgtattgtacgcagtcttatcatgttttttacacaagaggctgttt 22187309  T
Q  286 ccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccctc 355  Q
    |||  ||||||||| ||||| ||||||||| ||||| |||||||||| |||| |||||| ||||||||||    
T  22187308 ccaggacttaaaccggtgacctttcagtcaaatgacaacaactttactagttgcgccaaagttacccctc 22187239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 184 - 344
Target Start/End: Original strand, 12006340 - 12006500
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctat 283  Q
    |||||||||||||||||||||| |||||||||||||||| || |||||||| || |||| || || | || ||||||   ||||||||| |||||| | |    
T  12006340 ggtgcactaaagctcccgcataggcagggtctgggaaggggtcccaccattattggtgtattgtatggagccttaccctattttttacataagaggttgt 12006439  T
Q  284 ttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaa 344  Q
    ||||| |  | || |||||||| ||||||||||||||| ||||||| | ||||| ||||||    
T  12006440 ttccagacttgaaccccgtgacctttcagtcacatgacaacaacttgagcagttgcgccaa 12006500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 184 - 355
Target Start/End: Original strand, 8169996 - 8170163
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctat 283  Q
    |||||||| || |||||||||| |||||||| ||||||| || |||||||||   |||| || |||| || ||||||  |||||  |||||||  ||| |    
T  8169996 ggtgcactgaaactcccgcatatgcagggtccgggaaggggtcccaccatttg--gtgtattgtacgcagccttaccctgttttacacaaaag--gctgt 8170091  T
Q  284 ttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccctc 355  Q
    |||||  |||| |||||||||| |||| |||||||||| ||||||||||||||| ||||||||||| |||||    
T  8170092 ttccaggacttgaacccgtgacctttcggtcacatgacaacaactttaccagttgcgccaaggttagccctc 8170163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 266 - 355
Target Start/End: Complemental strand, 35710356 - 35710267
Alignment:
Q  266 ttttacaaaagaggctatttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccctc 355  Q
    ||||||| |||||||| ||||||  |||| |||||||||| ||||||| ||||||| ||||||||||||||| |||||||||||||||||    
T  35710356 ttttacacaagaggctgtttccaggacttgaacccgtgacctttcagttacatgacaacaactttaccagttgcgccaaggttacccctc 35710267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 266 - 355
Target Start/End: Original strand, 37024646 - 37024735
Alignment:
Q  266 ttttacaaaagaggctatttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccctc 355  Q
    ||||||| |||||||| ||||||  |||| |||||||||| ||||||||||||||| ||||||||||||||| | |||||||||||||||    
T  37024646 ttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcaccaaggttacccctc 37024735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 264 - 355
Target Start/End: Complemental strand, 1565476 - 1565385
Alignment:
Q  264 ttttttacaaaagaggctatttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccctc 355  Q
    ||||||||  |||||| | ||||||  |||| |||||| ||| ||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  1565476 ttttttactcaagaggttgtttccaggacttgaacccgcgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacccctc 1565385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 264 - 355
Target Start/End: Complemental strand, 23974825 - 23974735
Alignment:
Q  264 ttttttacaaaagaggctatttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccctc 355  Q
    ||||||||| |||||| | ||||||  |||| |||||||||| || |||||||||||| ||||||||||| ||| |||||||||||||||||    
T  23974825 ttttttacacaagaggttgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttacc-gttgcgccaaggttacccctc 23974735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 184 - 321
Target Start/End: Complemental strand, 32703545 - 32703412
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctat 283  Q
    ||||||||| |||||||||||| |||||||| ||||||| || |||||||||   |||| || |||| || ||||||  |||||  ||| |||||||| |    
T  32703545 ggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttg--gtgtattgtacgcagccttaccctgtttt--acacaagaggctgt 32703450  T
Q  284 ttccaaaacttaaacccgtgacatttcagtcacatgac 321  Q
    |||||  |||| |||||||||| |||||||||||||||    
T  32703449 ttccaggacttgaacccgtgacctttcagtcacatgac 32703412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 183 - 333
Target Start/End: Original strand, 28516444 - 28516593
Alignment:
Q  183 tggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggcta 282  Q
    |||| |||||||||||| |||| ||||||||||||||| | || ||||||||||   ||| || |||| || | || |  |||||||||| |||||| |     
T  28516444 tggtccactaaagctcctgcatgcgcagggtctgggaatgggtcccaccattttga-tgtattgtacgcagccctagcctgttttttacacaagaggatg 28516542  T
Q  283 tttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttacc 333  Q
    ||||||| |||| |||||||||| |||||| ||| |||| |||||||||||    
T  28516543 tttccaagacttgaacccgtgacctttcagccacctgacaacaactttacc 28516593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 184 - 346
Target Start/End: Complemental strand, 39301246 - 39301087
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctat 283  Q
    ||||||||||| ||||| |||||| |||||| ||||||| || ||||| ||||| |||  ||||||| |  ||||||  ||||| |||| |||||| | |    
T  39301246 ggtgcactaaa-ctcccacatacggagggtccgggaaggggtcccacc-tttttggtgcattatacgcatccttaccctgttttatacacaagaggttgt 39301149  T
Q  284 ttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaagg 346  Q
    | |||| |||| |||||||||| ||||||| ||||||| ||||||||||| ||| ||||||||    
T  39301148 tcccaagacttgaacccgtgacctttcagtaacatgacaacaactttacc-gttgcgccaagg 39301087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 184 - 235
Target Start/End: Complemental strand, 16957437 - 16957386
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattt 235  Q
    ||||||||||||||||||||||||||||||| ||||||| || |||||||||    
T  16957437 ggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattt 16957386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 184 - 234
Target Start/End: Complemental strand, 25622583 - 25622533
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccatt 234  Q
    ||||||||||||||||||||||||||||||| ||||||| || ||||||||    
T  25622583 ggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatt 25622533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 184 - 281
Target Start/End: Original strand, 13801779 - 13801876
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggct 281  Q
    ||||||||||||||| |||||| || ||||| ||||||| || |||||||| || |||| || |||| || ||||||  |||||||||| ||||||||    
T  13801779 ggtgcactaaagctctcgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaagaggct 13801876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 291 - 355
Target Start/End: Complemental strand, 22600472 - 22600408
Alignment:
Q  291 acttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccctc 355  Q
    |||| ||||||| || || |||||||||||  |||||||||||||||||| ||||||||||||||    
T  22600472 acttgaacccgtaaccttccagtcacatgataacaactttaccagttacgtcaaggttacccctc 22600408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 184 - 232
Target Start/End: Complemental strand, 39801639 - 39801591
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccacca 232  Q
    |||||||||||||||||||||||| |||||||||||||| || ||||||    
T  39801639 ggtgcactaaagctcccgcatacgtagggtctgggaaggggtcccacca 39801591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 184 - 317
Target Start/End: Original strand, 42924842 - 42924977
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagg--gtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggct 281  Q
    |||||||||||||| |||||||||||||  |||||||||||  ||||| ||||||| |||| || |||| |  ||||||  |||||||||| |||| | |    
T  42924842 ggtgcactaaagcttccgcatacgcagggtgtctgggaagggattccatcatttttggtgtattgtacgcaaccttaccctgttttttacacaagatgtt 42924941  T
Q  282 atttccaaaacttaaacccgtgacatttcagtcaca 317  Q
     ||| ||  |||| ||| |||||| |||||||||||    
T  42924942 gttttcaggacttgaactcgtgacctttcagtcaca 42924977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 184 - 235
Target Start/End: Complemental strand, 43574729 - 43574678
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattt 235  Q
    ||||| ||||||||||||||||||||||||| ||||||| || |||||||||    
T  43574729 ggtgctctaaagctcccgcatacgcagggtccgggaaggggtcccaccattt 43574678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 183 - 225
Target Start/End: Original strand, 31694119 - 31694161
Alignment:
Q  183 tggtgcactaaagctcccgcatacgcagggtctgggaaggagt 225  Q
    |||||||||||| |||||||||||||| |||||||||||||||    
T  31694119 tggtgcactaaatctcccgcatacgcaaggtctgggaaggagt 31694161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 195 - 354
Target Start/End: Complemental strand, 2838890 - 2838733
Alignment:
Q  195 gctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctatttccaaaactt 294  Q
    |||||||||||||||||||| | |||||  | |||||||||   |||| || |||| || ||||||  |||||| ||| |||| ||| ||||  | ||||    
T  2838890 gctcccgcatacgcagggtccgagaagggatcccaccatttg--gtgtattgtacgcagccttaccctgttttt-acacaagatgctgtttctgagactt 2838794  T
Q  295 aaacccgtgacattt-cagtcacatgaccacaactttaccagttacgccaaggttacccct 354  Q
     | | |||||| ||| |||||||||||| ||||||||||| ||| ||||||||||||||||    
T  2838793 gacctcgtgacctttacagtcacatgacaacaactttaccggttgcgccaaggttacccct 2838733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 191 - 236
Target Start/End: Original strand, 10306493 - 10306538
Alignment:
Q  191 taaagctcccgcatacgcagggtctgggaaggagttccaccatttt 236  Q
    |||||||||||||||||||||||| ||||||| || ||||||||||    
T  10306493 taaagctcccgcatacgcagggtccgggaaggggtcccaccatttt 10306538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 186 - 219
Target Start/End: Complemental strand, 18684394 - 18684361
Alignment:
Q  186 tgcactaaagctcccgcatacgcagggtctggga 219  Q
    ||||||||||||||||||||||||||||||||||    
T  18684394 tgcactaaagctcccgcatacgcagggtctggga 18684361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 299 - 352
Target Start/End: Original strand, 22861791 - 22861844
Alignment:
Q  299 ccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttaccc 352  Q
    ||||||| ||||||||||||||| ||||||||| |||||  |||||||||||||    
T  22861791 ccgtgacctttcagtcacatgacaacaactttatcagttgtgccaaggttaccc 22861844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 235
Target Start/End: Original strand, 7097771 - 7097823
Alignment:
Q  183 tggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattt 235  Q
    |||||||||||||||||||||||||||||||  ||||||| ||  ||||||||    
T  7097771 tggtgcactaaagctcccgcatacgcagggttcgggaaggggtctcaccattt 7097823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 311 - 355
Target Start/End: Complemental strand, 19438747 - 19438703
Alignment:
Q  311 agtcacatgaccacaactttaccagttacgccaaggttacccctc 355  Q
    ||||| ||||| ||||||||||||||| |||||||||||||||||    
T  19438747 agtcatatgacaacaactttaccagttgcgccaaggttacccctc 19438703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 236
Target Start/End: Original strand, 21784344 - 21784396
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccatttt 236  Q
    ||||||||||| ||||||||||||||||||| || |||| || ||||||||||    
T  21784344 ggtgcactaaacctcccgcatacgcagggtccggaaaggggtcccaccatttt 21784396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 288
Target Start/End: Complemental strand, 29334519 - 29334416
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctat 283  Q
    |||||| ||||| |||| ||||||||||||| ||||| | || |||||| || | |||| || |||| || ||||||| |||||||||| |||||||| |    
T  29334519 ggtgcattaaagatcccacatacgcagggtccgggaatgggtcccacca-ttctggtgtattgtacgcagccttaccttgttttttacacaagaggctgt 29334421  T
Q  284 ttcca 288  Q
    |||||    
T  29334420 ttcca 29334416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 283 - 346
Target Start/End: Original strand, 39079875 - 39079937
Alignment:
Q  283 tttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaagg 346  Q
    ||||||| |||| |||||||||| |||| |||||||||| ||||||||||| ||| ||||||||    
T  39079875 tttccaagacttgaacccgtgacctttctgtcacatgacaacaactttacc-gttgcgccaagg 39079937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 186 - 232
Target Start/End: Original strand, 5873336 - 5873382
Alignment:
Q  186 tgcactaaagctcccgcatacgcagggtctgggaaggagttccacca 232  Q
    ||||||||||||||||||||||||| ||| ||| |||||| ||||||    
T  5873336 tgcactaaagctcccgcatacgcagtgtccggggaggagtcccacca 5873382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 184 - 214
Target Start/End: Complemental strand, 13774988 - 13774958
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtc 214  Q
    |||||||||||||||||||||||||||||||    
T  13774988 ggtgcactaaagctcccgcatacgcagggtc 13774958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 184 - 281
Target Start/End: Original strand, 16880659 - 16880754
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggct 281  Q
    |||||||||||||||||||||||||| |||| ||||||  ||  |||||  ||| |||| || |||| || ||||||  |||||||||| ||||||||    
T  16880659 ggtgcactaaagctcccgcatacgcatggtccgggaagtggtcacacca--tttggtgtattgtacgcagccttaccctgttttttacacaagaggct 16880754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 19142956 - 19143006
Alignment:
Q  185 gtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattt 235  Q
    |||||||||| |||||||||||||| |||| ||||||| || |||||||||    
T  19142956 gtgcactaaatctcccgcatacgcatggtccgggaaggggtcccaccattt 19143006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 184 - 222
Target Start/End: Complemental strand, 32354250 - 32354212
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaagg 222  Q
    ||||||||||||||||||||||| ||||||| |||||||    
T  32354250 ggtgcactaaagctcccgcatacacagggtccgggaagg 32354212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 225
Target Start/End: Original strand, 29184073 - 29184114
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagt 225  Q
    |||||||||||||||||||||||||| ||||||  |||||||    
T  29184073 ggtgcactaaagctcccgcatacgcatggtctgacaaggagt 29184114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 265 - 321
Target Start/End: Complemental strand, 1850684 - 1850628
Alignment:
Q  265 tttttacaaaagaggctatttccaaaacttaaacccgtgacatttcagtcacatgac 321  Q
    |||||||| |||||| |||||||   |||| |||||||||| |||||||||||||||    
T  1850684 tttttacacaagaggttatttccgggacttgaacccgtgacctttcagtcacatgac 1850628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 181 - 213
Target Start/End: Original strand, 4654424 - 4654456
Alignment:
Q  181 cttggtgcactaaagctcccgcatacgcagggt 213  Q
    ||||||||||||||||||||||||| |||||||    
T  4654424 cttggtgcactaaagctcccgcatatgcagggt 4654456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 184 - 236
Target Start/End: Original strand, 12575672 - 12575724
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccatttt 236  Q
    ||||||| |||||||| ||||||||||||||  |||||| || ||||||||||    
T  12575672 ggtgcaccaaagctcctgcatacgcagggtccaggaaggggtcccaccatttt 12575724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 185 - 213
Target Start/End: Complemental strand, 18099983 - 18099955
Alignment:
Q  185 gtgcactaaagctcccgcatacgcagggt 213  Q
    |||||||||||||||||||||||||||||    
T  18099983 gtgcactaaagctcccgcatacgcagggt 18099955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 85; Significance: 2e-40; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 184 - 355
Target Start/End: Complemental strand, 36720919 - 36720750
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctat 283  Q
    |||||||||||||| |||||||||||||||| ||||||| || |||||||||   |||| || |||| || ||||||  |||||||||| |||||||| |    
T  36720919 ggtgcactaaagcttccgcatacgcagggtccgggaaggggtcccaccatttg--gtgtattgtacgcagccttaccctgttttttacacaagaggctgt 36720822  T
Q  284 ttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccctc 355  Q
    |||||  |||| |||||||||| || |||||||||||| |||||||||||||||||||||||||||||||||    
T  36720821 ttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttacgccaaggttacccctc 36720750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 184 - 355
Target Start/End: Original strand, 39461006 - 39461177
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctat 283  Q
    ||||||||||||||||||||||||||||||| ||||||| ||  ||||||| || |||| || |||| || |||||   |||||||||| |||||||| |    
T  39461006 ggtgcactaaagctcccgcatacgcagggtccgggaaggggtctcaccattattggtgtattgtacgcagccttactctgttttttacacaagaggctgt 39461105  T
Q  284 ttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccctc 355  Q
    |||||  |||| |||||||||| |||||||| |||||| ||||||||||||||| |||||||||||||||||    
T  39461106 ttccaggacttgaacccgtgacctttcagtctcatgacaacaactttaccagttgcgccaaggttacccctc 39461177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 186 - 355
Target Start/End: Original strand, 28817640 - 28817807
Alignment:
Q  186 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctattt 285  Q
    ||||||||||||||||||||||||||||| ||||||| || ||||||||    |||| || |||| || ||||||  |||||||||| |||||||| |||    
T  28817640 tgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattgg--gtgtattgtacgcagccttaccctgttttttacacaagaggctgttt 28817737  T
Q  286 ccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccctc 355  Q
    |||  |||| |||||||||| || |||||||||||| ||||||||||||||| | |||||||||||||||    
T  28817738 ccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcaccaaggttacccctc 28817807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 184 - 355
Target Start/End: Complemental strand, 44530272 - 44530103
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctat 283  Q
    |||||||||||||||||||||||||||||||  |||||| || |||||||||   |||| || |||| || ||||||  |||||||||| |||||| | |    
T  44530272 ggtgcactaaagctcccgcatacgcagggtccaggaaggggtcccaccatttg--gtgtattgtacgcagccttaccctgttttttacacaagaggttgt 44530175  T
Q  284 ttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccctc 355  Q
    |||||| |||| |||||||||| ||  |||||||||||  |||||||||||||| |||||||||||||||||    
T  44530174 ttccaagacttgaacccgtgaccttctagtcacatgacagcaactttaccagttgcgccaaggttacccctc 44530103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 184 - 355
Target Start/End: Original strand, 7136539 - 7136710
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctat 283  Q
    |||||||||||||||||||||| || ||||| ||||||| || |||||||| || |||| || |||| || ||||||  | |||||||| |||||| | |    
T  7136539 ggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctggtttttacacaagaggttgt 7136638  T
Q  284 ttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccctc 355  Q
    |||||  |||| ||||| |||| || |||||||||||| ||||||||||||||| |||||||||||||||||    
T  7136639 ttccaggacttgaacccatgaccttccagtcacatgacaacaactttaccagttgcgccaaggttacccctc 7136710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 184 - 355
Target Start/End: Original strand, 12670262 - 12670429
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctat 283  Q
    ||||||||| |||||||||||| |||||||| ||||||| || |||||||||   |||| || |||| || ||||||  |||||  ||| |||||||| |    
T  12670262 ggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttg--gtgtattgtacgcagccttaccctgtttt--acacaagaggctgt 12670357  T
Q  284 ttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccctc 355  Q
    |||||  |||| |||||||||| ||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  12670358 ttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacccctc 12670429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 184 - 355
Target Start/End: Original strand, 30454109 - 30454276
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctat 283  Q
    ||||||||| |||||||||||| |||||||| ||||||| || |||||||||   |||| |  |||| || ||||||| |||||  ||| |||||||| |    
T  30454109 ggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttg--gtgtatcgtacgcagccttaccttgtttt--acacaagaggctgt 30454204  T
Q  284 ttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccctc 355  Q
    |||||  |||| |||||||||| ||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  30454205 ttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacccctc 30454276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 184 - 355
Target Start/End: Complemental strand, 17823699 - 17823530
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctat 283  Q
    |||||||||||||||| ||||| |||||||  ||||||| ||||||||||||   |||| || |||| ||||||| |  | |||||||| |||||||| |    
T  17823699 ggtgcactaaagctcctgcatatgcagggttcgggaaggggttccaccatttg--gtgtattttacgcagtcttatcctggtttttacacaagaggctgt 17823602  T
Q  284 ttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccctc 355  Q
    |||||  |||| |||||||||| |||| |||||||||| ||||||||||||||| ||||||| |||||||||    
T  17823601 ttccaggacttgaacccgtgacctttcggtcacatgacaacaactttaccagttgcgccaagattacccctc 17823530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 184 - 355
Target Start/End: Original strand, 29521697 - 29521866
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctat 283  Q
    |||||||||||||||||||||||||||||||||||| ||  | |||||||||   |||| || |||| || ||||||  |||||||| | |||||||| |    
T  29521697 ggtgcactaaagctcccgcatacgcagggtctgggatgggttcccaccatttg--gtgtattgtacgcagccttaccctgttttttaaacaagaggctgt 29521794  T
Q  284 ttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccctc 355  Q
    |||||  |||| |||||||||| || |||||||| ||| ||||||||| ||||| |||||||||||||||||    
T  29521795 ttccaggacttgaacccgtgaccttccagtcacacgacaacaactttatcagttgcgccaaggttacccctc 29521866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 184 - 355
Target Start/End: Complemental strand, 35261802 - 35261633
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctat 283  Q
    |||||||||||||||||||||||||||||||  |||||| || |||||||||   |||| || |||| |  ||||||  |||||||||| ||||| || |    
T  35261802 ggtgcactaaagctcccgcatacgcagggtccaggaaggggtcccaccatttg--gtgtattgtacgcaaccttaccctgttttttacacaagagactgt 35261705  T
Q  284 ttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccctc 355  Q
    |||||   ||| |||||||||| || |||||||||||| ||||||||||||||| |||||||||||||||||    
T  35261704 ttccagggcttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgccaaggttacccctc 35261633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 183 - 355
Target Start/End: Complemental strand, 2626646 - 2626473
Alignment:
Q  183 tggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacc---tagttttttacaaaagagg 279  Q
    ||||||||| ||||||||||||| |||||||||||||||| || ||| ||  ||| |||| || |||| |||||||||   |  ||||||||| ||||||    
T  2626646 tggtgcactgaagctcccgcatatgcagggtctgggaaggggtcccatca--tttggtgtattgtacgcagtcttaccctgtttttttttacacaagagg 2626549  T
Q  280 ctatttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccctc 355  Q
    || ||||||  |||| |||||||||| |||| |||||||||| |||||||||||| || |||||||||||||||||    
T  2626548 ctgtttccaggacttgaacccgtgacctttcggtcacatgacaacaactttaccaattgcgccaaggttacccctc 2626473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 184 - 351
Target Start/End: Original strand, 20284081 - 20284250
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacc--tagttttttacaaaagaggct 281  Q
    ||||||||||| ||||||||||||||||||| ||||||| || |||||||| || |||| || |||| || ||||||  |  ||||||| | ||||||||    
T  20284081 ggtgcactaaaactcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttacccttttttttttatacaagaggct 20284180  T
Q  282 atttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacc 351  Q
     ||||||  |||| |||||||||| ||||||||||||||| ||||||||||| ||| || ||||||||||    
T  20284181 gtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttacccgttgcgtcaaggttacc 20284250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 184 - 351
Target Start/End: Original strand, 21070709 - 21070879
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacc---tagttttttacaaaagaggc 280  Q
    ||||||||||| ||||||||||||||||||| ||||||| || |||||||| || |||| || |||| || ||||||   |  ||||||| | |||||||    
T  21070709 ggtgcactaaaactcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctttttttttttatacaagaggc 21070808  T
Q  281 tatttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacc 351  Q
    | ||||||  |||| |||||||||| ||||||||||||||| ||||||||||| ||| || ||||||||||    
T  21070809 tgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttacccgttgcgtcaaggttacc 21070879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 184 - 355
Target Start/End: Complemental strand, 45071387 - 45071219
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctat 283  Q
    |||||||| ||||||||||||||||| |||| ||||||| || |||||||||   |||| || |||| || ||||||  |||||| ||| |||||||| |    
T  45071387 ggtgcactgaagctcccgcatacgcaaggtccgggaaggggtcccaccatttg--gtgtattgtacgcagccttaccctgttttt-acacaagaggctgt 45071291  T
Q  284 ttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccctc 355  Q
    ||||| ||||| |||||||||| || || ||||||||| ||||||||||||||  |||||||||||||||||    
T  45071290 ttccagaacttgaacccgtgaccttacaatcacatgacaacaactttaccagtatcgccaaggttacccctc 45071219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 184 - 355
Target Start/End: Complemental strand, 6760947 - 6760777
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctat 283  Q
    |||||||||||||||||||||| || ||||| | ||||| || |||||||| || |||| || |||| || ||||||  |||||||||| |||||||| |    
T  6760947 ggtgcactaaagctcccgcatatgcggggtccgagaaggggtcccaccattattggtgtattgtacgaagccttaccctgttttttacacaagaggctgt 6760848  T
Q  284 ttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccctc 355  Q
    |||||  |||| |||||||||| ||  ||||| ||||| ||||||||||||||| |||||| ||||||||||    
T  6760847 ttccaggacttgaacccgtgaccttctagtcatatgacaacaactttaccagttgcgccaa-gttacccctc 6760777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 185 - 355
Target Start/End: Complemental strand, 26954257 - 26954086
Alignment:
Q  185 gtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagtttttt-acaaaagaggctat 283  Q
    ||||||||||||||||||||| ||  |||||||||||| || |||||||| || |||| || |||| || ||||||  ||||||| ||| |||||||| |    
T  26954257 gtgcactaaagctcccgcatatgcgaggtctgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtttttttacacaagaggctgt 26954158  T
Q  284 ttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccctc 355  Q
    |||||  |||| |||||||||| ||  | ||||||||| |||||||||||| ||||||||| ||||||||||    
T  26954157 ttccaggacttgaacccgtgaccttctaatcacatgacaacaactttaccaattacgccaaagttacccctc 26954086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 187 - 355
Target Start/End: Complemental strand, 13160821 - 13160656
Alignment:
Q  187 gcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctatttc 286  Q
    ||||| |||||||||||||||||||||| ||||||| || |||||||||   |||| || |||| || ||||||  |||||| ||| |||||||| ||||    
T  13160821 gcactgaagctcccgcatacgcagggtccgggaaggggtcccaccatttg--gtgtattgtacgcagccttaccctgttttt-acacaagaggctgtttc 13160725  T
Q  287 caaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccctc 355  Q
     |  |||| |||||||||| || |||||||||||| ||||||||||||||| |||| ||||||||||||    
T  13160724 taggacttgaacccgtgaccttacagtcacatgacaacaactttaccagttgcgccgaggttacccctc 13160656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 216 - 354
Target Start/End: Complemental strand, 11748392 - 11748254
Alignment:
Q  216 gggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctatttccaaaacttaaacccgtgacatttcagtca 315  Q
    ||||||| || | |||||||||||| | || ||||  ||||||||  | ||||||||||||||||| ||||||| |||| ||||||||||||||||||||    
T  11748392 gggaaggggtcctaccattttttgtatattgtacgctgtcttaccctgctttttacaaaagaggctgtttccaagacttgaacccgtgacatttcagtca 11748293  T
Q  316 catgaccacaactttaccagttacgccaaggttacccct 354  Q
    |||||| |||| || ||||||| | |||| |||||||||    
T  11748292 catgacaacaatttcaccagttgcaccaaagttacccct 11748254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 185 - 346
Target Start/End: Original strand, 44781517 - 44781677
Alignment:
Q  185 gtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctatt 284  Q
    ||||||||||||||||||||||||||||||||||| || || ||| ||||||| |||| || |||  || ||||||  || ||||||| |||||| | ||    
T  44781517 gtgcactaaagctcccgcatacgcagggtctgggacggggtcccaacatttttggtgtattgtacacagccttaccctgtcttttacacaagaggttgtt 44781616  T
Q  285 tccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaagg 346  Q
    ||||  |||| |||||||||  |||||||||| |||| ||||||||||| ||| ||||||||    
T  44781617 tccaggacttgaacccgtgaactttcagtcacgtgacaacaactttacc-gttgcgccaagg 44781677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 266 - 355
Target Start/End: Original strand, 20869588 - 20869677
Alignment:
Q  266 ttttacaaaagaggctatttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccctc 355  Q
    ||||||| |||||||| ||||||  |||| |||||||||| ||||||||||||||| ||||||||||||||| ||||||||||| |||||    
T  20869588 ttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttatccctc 20869677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 191 - 355
Target Start/End: Complemental strand, 24245565 - 24245405
Alignment:
Q  191 taaagctcccgcatacgcagggtctgggaaggagttccaccattttttg-tgtgttatacgtagtcttacctagttttttacaaaagaggctatttccaa 289  Q
    ||||||||||||||||||||||||  |||||| || |||| |||||||| ||  || ||||||||||||||  |||    ||| ||||| |  ||||||     
T  24245565 taaagctcccgcatacgcagggtccaggaaggggtcccacaattttttggtgcattgtacgtagtcttaccctgtt----acataagagacg-tttccag 24245471  T
Q  290 aacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccctc 355  Q
     |||| |||||||||| ||||||||||||||| ||||||||||||||| | |||||||||||||||    
T  24245470 gacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgccccaaggttacccctc 24245405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 184 - 350
Target Start/End: Original strand, 8897776 - 8897940
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctat 283  Q
    |||||| ||||||||||||||| |||||||| ||||||| || ||||||  ||| |||| || ||||||| ||||||   ||||||||| ||| || | |    
T  8897776 ggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccacca--tttggtgtattgtacgtagccttaccctattttttacacaagcggttgt 8897873  T
Q  284 ttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttac 350  Q
    |||||  |||| |||||||||| || | |||||||||| |||||||||||||||  |||| ||||||    
T  8897874 ttccaggacttcaacccgtgaccttgctgtcacatgacaacaactttaccagttgtgccagggttac 8897940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 184 - 351
Target Start/End: Complemental strand, 25250647 - 25250480
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctat 283  Q
    ||||||||||| |||||||||| || ||||  ||||||| || |||||||| || |||| || |||| || | ||||   ||||||||| || ||||| |    
T  25250647 ggtgcactaaatctcccgcatatgcggggttcgggaaggggtcccaccattattggtgtattgtacgcagccataccctattttttacacaataggctgt 25250548  T
Q  284 ttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacc 351  Q
    |||||  |||| |||  ||||| || |||||||||||| |||||||||||||||  ||||||||||||    
T  25250547 ttccaggacttgaacatgtgaccttccagtcacatgacaacaactttaccagttgtgccaaggttacc 25250480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 265 - 355
Target Start/End: Original strand, 18164850 - 18164940
Alignment:
Q  265 tttttacaaaagaggctatttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccctc 355  Q
    |||||||| |||||||| ||||||  |||| |||||||||| ||||||||||||||| ||||||| ||| ||| ||||||| |||||||||    
T  18164850 tttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaacttcaccggttgcgccaagattacccctc 18164940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 265 - 346
Target Start/End: Complemental strand, 28407460 - 28407379
Alignment:
Q  265 tttttacaaaagaggctatttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaagg 346  Q
    |||||||| |||||||| ||||||  |||| |||||||||| || |||||||||||| ||||||||||||||| ||||||||    
T  28407460 tttttacacaagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgccaagg 28407379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 184 - 281
Target Start/End: Complemental strand, 16225144 - 16225047
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggct 281  Q
    |||||||||||||||||||||| || ||||| |||||||  | |||||||| || |||| || |||| |||||||||  |||||||||| ||||||||    
T  16225144 ggtgcactaaagctcccgcatatgcggggtccgggaagggatcccaccattattggtgtattgtacgcagtcttaccctgttttttacataagaggct 16225047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 184 - 337
Target Start/End: Complemental strand, 12626013 - 12625861
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtctta-cctagttttttacaaaagaggcta 282  Q
    ||||||||||||||||||||||||||||||| |||| || || ||||||  ||| |||| || || | ||||||| |||  ||||||||| |||||| |     
T  12626013 ggtgcactaaagctcccgcatacgcagggtccgggagggggtcccacca--tttggtgtattgtatgcagtcttaccctgtttttttacacaagaggttg 12625916  T
Q  283 tttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagtt 337  Q
    ||||||  |||| | |||||||| |   ||||||| ||| |||||||||||||||    
T  12625915 tttccaggacttgagcccgtgacctacaagtcacacgacaacaactttaccagtt 12625861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 184 - 242
Target Start/End: Complemental strand, 16013579 - 16013521
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgt 242  Q
    |||||||||||||||||||||| |||||||||||||||| ||  |||||||||| ||||    
T  16013579 ggtgcactaaagctcccgcataggcagggtctgggaaggggtcgcaccatttttagtgt 16013521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 192 - 332
Target Start/End: Original strand, 24365079 - 24365218
Alignment:
Q  192 aaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctag-ttttttacaaaagaggctatttccaaa 290  Q
    ||||||||| ||||||||||||| ||||||| || |||||||||   |||| || | || || ||||||  | ||||||||| |||||||| |||| |      
T  24365079 aaagctcccacatacgcagggtccgggaaggggtcccaccatttg--gtgtattgttcgcagccttaccctgattttttacacaagaggctgtttctagg 24365176  T
Q  291 acttaaacccgtgacatttcagtcacatgaccacaactttac 332  Q
     ||| |||||||||||||| ||||||||||| ||||||||||    
T  24365177 gcttgaacccgtgacattttagtcacatgacaacaactttac 24365218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 183 - 288
Target Start/End: Complemental strand, 29877218 - 29877115
Alignment:
Q  183 tggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggcta 282  Q
    ||||||||||| |||||||||||||||||||| ||||||| || ||||||  ||| |||| || |||| || ||||||  |||||||||| || |||||     
T  29877218 tggtgcactaacgctcccgcatacgcagggtccgggaaggggtcccacca--tttggtgtattgtacgcagccttaccctgttttttacacaaaaggctg 29877121  T
Q  283 tttcca 288  Q
    ||||||    
T  29877120 tttcca 29877115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 184 - 300
Target Start/End: Complemental strand, 5689754 - 5689640
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctat 283  Q
    ||||||||||||||||| |||||||| |||  ||||||| |||||||||  ||| |||| || |||| || ||||||  | |||||||| ||||||||||    
T  5689754 ggtgcactaaagctcccacatacgcatggttcgggaaggggttccacca--tttggtgtattgtacgcagccttaccctgctttttacacaagaggctat 5689657  T
Q  284 ttccaaaacttaaaccc 300  Q
    || ||| |||| |||||    
T  5689656 ttacaagacttgaaccc 5689640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 184 - 316
Target Start/End: Original strand, 8483950 - 8484080
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctat 283  Q
    ||||| |||||||||||||||||||||||||||||| || || ||||||   || |||| || |||| || ||| ||  |||||||||| |||||| | |    
T  8483950 ggtgccctaaagctcccgcatacgcagggtctgggatggggtcccacca--attggtgtattgtacgcagccttgccctgttttttacacaagaggttgt 8484047  T
Q  284 ttccaaaacttaaacccgtgacatttcagtcac 316  Q
    |||||  |||| ||||| |||||||| ||||||    
T  8484048 ttccaggacttgaacccatgacatttaagtcac 8484080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 184 - 288
Target Start/End: Complemental strand, 20870048 - 20869944
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctat 283  Q
    |||||||||||||||||||||| || |||||  |||||| || |||||||| || |||| || |||| || ||||||  |||||||||| ||||| || |    
T  20870048 ggtgcactaaagctcccgcatatgcggggtcctggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaagagactgt 20869949  T
Q  284 ttcca 288  Q
    |||||    
T  20869948 ttcca 20869944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 184 - 221
Target Start/End: Original strand, 27468104 - 27468141
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaag 221  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  27468104 ggtgcactaaagctcccgcatacgcagggtccgggaag 27468141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 18164772 - 18164808
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaa 220  Q
    ||||||||||||||||||||||||||||||| |||||    
T  18164772 ggtgcactaaagctcccgcatacgcagggtccgggaa 18164808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 232
Target Start/End: Complemental strand, 27508033 - 27507985
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccacca 232  Q
    ||||||||||||||||||||||||||||||  ||||||| || ||||||    
T  27508033 ggtgcactaaagctcccgcatacgcagggttcgggaaggggtcccacca 27507985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 312 - 355
Target Start/End: Original strand, 23286431 - 23286474
Alignment:
Q  312 gtcacatgaccacaactttaccagttacgccaaggttacccctc 355  Q
    |||||||||| ||||||||||||||| || ||||||||||||||    
T  23286431 gtcacatgacaacaactttaccagttgcgacaaggttacccctc 23286474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 184 - 235
Target Start/End: Complemental strand, 26102640 - 26102589
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattt 235  Q
    ||||||||| |||||||||||| |||||||| ||||||| || |||||||||    
T  26102640 ggtgcactagagctcccgcataagcagggtccgggaaggggtcccaccattt 26102589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 184 - 235
Target Start/End: Complemental strand, 28407526 - 28407475
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattt 235  Q
    |||||| ||||||||||||||||| |||||| ||||||| || |||||||||    
T  28407526 ggtgcagtaaagctcccgcatacgtagggtccgggaaggggtcccaccattt 28407475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 184 - 235
Target Start/End: Complemental strand, 31457295 - 31457244
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattt 235  Q
    ||||||||| |||||||||||||||||||| |||||||| || | |||||||    
T  31457295 ggtgcactagagctcccgcatacgcagggtttgggaaggggtcctaccattt 31457244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 313 - 355
Target Start/End: Original strand, 40605044 - 40605086
Alignment:
Q  313 tcacatgaccacaactttaccagttacgccaaggttacccctc 355  Q
    ||||||||| ||||||||||||||| |||||| ||||||||||    
T  40605044 tcacatgacaacaactttaccagttgcgccaaagttacccctc 40605086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 184 - 260
Target Start/End: Complemental strand, 33867075 - 33866999
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacc 260  Q
    |||||||||||||| | |||||||||||||  |||||| |||  ||||||||||| ||| || || | |||||||||    
T  33867075 ggtgcactaaagcttctgcatacgcagggttcgggaagaagtgtcaccattttttatgtattgtatgcagtcttacc 33866999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 85; Significance: 2e-40; HSPs: 68)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 184 - 348
Target Start/End: Original strand, 16408613 - 16408777
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctat 283  Q
    |||||||||||||||||||||| || ||||| ||||||| ||||||||||| || |||| || |||| |||||||||  |||||||||| |||||||| |    
T  16408613 ggtgcactaaagctcccgcatatgcggggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgttttttacacaagaggctgt 16408712  T
Q  284 ttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggtt 348  Q
    |||||  |||| |||||||||| || |||||||||||| ||||||||||||||| ||||||||||    
T  16408713 ttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgccaaggtt 16408777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 184 - 355
Target Start/End: Original strand, 6430638 - 6430806
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctat 283  Q
    ||||| ||||||||||||||||||||||||| ||||||  || ||||||  ||| |||| || |||| || ||||||  | |||||||| |||||||| |    
T  6430638 ggtgcgctaaagctcccgcatacgcagggtccgggaagtggtcccacca--tttggtgtattgtacgcagccttaccctg-tttttacacaagaggctgt 6430734  T
Q  284 ttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccctc 355  Q
    |||||  |||| |||||||||| ||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  6430735 ttccatgacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacccctc 6430806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 185 - 355
Target Start/End: Complemental strand, 5648380 - 5648213
Alignment:
Q  185 gtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctatt 284  Q
    ||||||| |||||||||||||||||||||| ||||||| || |||||||||   |||| || |||| || ||||||  |||||| ||| |||||||| ||    
T  5648380 gtgcactgaagctcccgcatacgcagggtccgggaaggggtcccaccatttg--gtgtattgtacgcagccttaccctgttttt-acacaagaggctgtt 5648284  T
Q  285 tccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccctc 355  Q
    ||||  |||| |||||||||| || |||||||||||| ||||||||||||||| |||||||||||||||||    
T  5648283 tccaggacttgaacccgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccctc 5648213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 184 - 355
Target Start/End: Complemental strand, 21647089 - 21646918
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctat 283  Q
    |||||||||||||||||||||| || ||||||||||||| || |||||||| || || | || |||| || ||||||   ||||||||| |||||||| |    
T  21647089 ggtgcactaaagctcccgcatatgcggggtctgggaaggggtcccaccattattggtatattgtacgcagccttaccctattttttacacaagaggctgt 21646990  T
Q  284 ttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccctc 355  Q
    |||||  |||| |||| ||||| || |||||||||||| ||||||||||||||| ||||||||||| |||||    
T  21646989 ttccaggacttgaacctgtgaccttccagtcacatgacaacaactttaccagttgcgccaaggttatccctc 21646918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 184 - 352
Target Start/End: Complemental strand, 54730375 - 54730206
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtctta-cctagttttttacaaaagaggcta 282  Q
    ||||||||||||||||||||||||||||||| ||||||| |||||| |||| || |||| ||||||| || |||| |||| ||||||||| ||||||||     
T  54730375 ggtgcactaaagctcccgcatacgcagggtccgggaaggggttccatcattattggtgtattatacgcagccttatcctatttttttacacaagaggctg 54730276  T
Q  283 tttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttaccc 352  Q
    |||| |  |||| |||||||||| |||  |||||||||| |||||||||||  || |||||| |||||||    
T  54730275 tttctaggacttgaacccgtgaccttttggtcacatgacaacaactttaccgattgcgccaaagttaccc 54730206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 184 - 355
Target Start/End: Complemental strand, 23501912 - 23501747
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctat 283  Q
    |||||||||||||||||||||| |||||||| ||||||| || |||||||| || |||| || |||| |  ||||||  |||||||||| |||||||| |    
T  23501912 ggtgcactaaagctcccgcatatgcagggtccgggaaggggtcccaccattattggtgtattgtacgcaaccttaccctgttttttacacaagaggctgt 23501813  T
Q  284 ttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccctc 355  Q
           |||| |||||||||| ||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  23501812 g------acttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacccctc 23501747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 184 - 336
Target Start/End: Original strand, 44363142 - 44363294
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctat 283  Q
    ||||||||||||||||||||||||||||||| ||||||| || ||||||||||| ||| ||| |||| || | ||||  |||||||||| | |||||| |    
T  44363142 ggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttttggtgcgttgtacgcagccctaccctgttttttacacacgaggctgt 44363241  T
Q  284 ttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagt 336  Q
    || ||  |||| ||| |||||| ||||||||||||||| ||||||||||||||    
T  44363242 tttcaggacttgaactcgtgacctttcagtcacatgacaacaactttaccagt 44363294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 189 - 352
Target Start/End: Complemental strand, 16911682 - 16911519
Alignment:
Q  189 actaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctatttcca 288  Q
    |||||||||||||| ||||||||||| ||||||| || |||||||| || |||| || |||| || ||||||  | ||| |||| |||||||| |||| |    
T  16911682 actaaagctcccgcgtacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgatttgtacacaagaggctgtttcta 16911583  T
Q  289 aaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttaccc 352  Q
      |||| |||||||||| ||| ||||||||||| ||||||||||||||| ||||||||||||||    
T  16911582 ggacttgaacccgtgacctttaagtcacatgacaacaactttaccagttgcgccaaggttaccc 16911519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 184 - 355
Target Start/End: Original strand, 11054160 - 11054327
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctat 283  Q
    ||||||||| |||||||||||| |||||||| ||||||| ||||| ||||||   |||| || |||| |||||||||  |||||  ||| ||||| || |    
T  11054160 ggtgcactagagctcccgcatatgcagggtccgggaaggggttccgccatttg--gtgtattgtacgcagtcttaccctgtttt--acacaagagactgt 11054255  T
Q  284 ttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccctc 355  Q
    || ||  |||| |||||||||| ||||||||||||||| ||||||||||||||| |||||| ||||||||||    
T  11054256 tttcaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaagttacccctc 11054327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 184 - 355
Target Start/End: Complemental strand, 20225105 - 20224938
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctat 283  Q
    ||||||||| |||||||||||| |||||||| ||||||| || |||||||||   |||| || |||| || ||||||  |||||  ||| |||||| | |    
T  20225105 ggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttg--gtgtattgtacgcagccttaccctgtttt--acacaagaggttgt 20225010  T
Q  284 ttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccctc 355  Q
    |||||  |||| ||||| |||| ||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  20225009 ttccaggacttgaacccatgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacccctc 20224938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 184 - 355
Target Start/End: Original strand, 48598837 - 48599004
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctat 283  Q
    ||||||||| |||||| ||||| ||| |||| ||||||| || |||||||||   |||| || |||| || ||||||  |||||  ||| |||||||| |    
T  48598837 ggtgcactagagctccggcatatgcatggtccgggaaggggtcccaccatttg--gtgtattgtacgcagccttaccctgtttt--acacaagaggctgt 48598932  T
Q  284 ttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccctc 355  Q
    |||||  |||| |||||||||| ||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  48598933 ttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacccctc 48599004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 185 - 355
Target Start/End: Complemental strand, 30639501 - 30639334
Alignment:
Q  185 gtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctatt 284  Q
    ||||||||||||||||||||| |||||||| ||||||| ||  |||||  ||| |||| || |||| || ||||||  | |||||||| ||||| || ||    
T  30639501 gtgcactaaagctcccgcatatgcagggtccgggaaggggtctcacca--tttggtgtattgtacgcagccttaccctg-tttttacacaagagtctgtt 30639405  T
Q  285 tccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccctc 355  Q
    ||||  |||| |||| ||||| ||||||||||| ||| ||||||||||||||| |||||||||||||||||    
T  30639404 tccaggacttgaaccagtgacctttcagtcacaagacaacaactttaccagttgcgccaaggttacccctc 30639334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 184 - 333
Target Start/End: Complemental strand, 35567293 - 35567146
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctat 283  Q
    |||||||||||||||||||| |||||||||  ||||||| || |||||||||   ||||||| |||  || ||||||  |||||||||| ||| |||| |    
T  35567293 ggtgcactaaagctcccgcagacgcagggttcgggaaggggtcccaccatttg--gtgtgttgtacacagccttaccctgttttttacacaagtggctgt 35567196  T
Q  284 ttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttacc 333  Q
    |||||| |||| ||||| |||| ||||||| ||||||| |||||||||||    
T  35567195 ttccaagacttgaacccatgacctttcagttacatgacaacaactttacc 35567146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 266 - 355
Target Start/End: Original strand, 5306755 - 5306844
Alignment:
Q  266 ttttacaaaagaggctatttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccctc 355  Q
    ||||||| |||||||| ||||||  |||| |||||||||| |||||||||||||||  |||||||||||||| |||||||||||||||||    
T  5306755 ttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacatcaactttaccagttgcgccaaggttacccctc 5306844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 184 - 336
Target Start/End: Complemental strand, 40915951 - 40915802
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctat 283  Q
    |||||||| |||||||||||||||||||||| |||||||  | |||||||||   |||| || |||| || ||||||| |||||| ||| |||||||| |    
T  40915951 ggtgcactgaagctcccgcatacgcagggtccgggaagggctcccaccatttg--gtgtattgtacgcagccttaccttgttttt-acacaagaggctgt 40915855  T
Q  284 ttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagt 336  Q
    |||||  |||| |||||||||| ||  ||||||||||| ||||||||||||||    
T  40915854 ttccaggacttgaacccgtgaccttatagtcacatgacaacaactttaccagt 40915802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 184 - 355
Target Start/End: Original strand, 47528542 - 47528709
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctat 283  Q
    ||||||||| ||||||| ||||  ||||||| ||||||| || |||||||||   |||| || |||| || ||||||  |||||  ||| |||||||| |    
T  47528542 ggtgcactagagctcccacatattcagggtccgggaaggggtcccaccatttg--gtgtattgtacgcagccttaccctgtttt--acacaagaggctgt 47528637  T
Q  284 ttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccctc 355  Q
    |||||  |||| |||| ||||| ||||||||||||||| ||||||||||||||| | |||||||||||||||    
T  47528638 ttccaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcaccaaggttacccctc 47528709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 184 - 350
Target Start/End: Original strand, 30352592 - 30352767
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctag---------ttttttacaaa 274  Q
    ||||||||||||||||||||||||||||||| | ||||| || ||||||||||| |||| || |||| ||  |||| ||          ||||||||| |    
T  30352592 ggtgcactaaagctcccgcatacgcagggtccgagaaggggtcccaccatttttggtgtattgtacgcagctttacttaccctgtttttttttttacaca 30352691  T
Q  275 agaggctatttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttac 350  Q
    ||||||| ||||||  |||  |||||||||| |||| ||||| |||| ||||||||||||||| ||||||||||||    
T  30352692 agaggctgtttccaggactctaacccgtgacctttcggtcacttgacaacaactttaccagttgcgccaaggttac 30352767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 183 - 352
Target Start/End: Complemental strand, 14983958 - 14983791
Alignment:
Q  183 tggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggcta 282  Q
    |||| ||||||||||||||||||||||||||| ||||||| || |||||||||   |||| || || | |  ||||||   ||||||||| ||||||||     
T  14983958 tggtacactaaagctcccgcatacgcagggtccgggaaggggtcccaccattta--gtgtattgtaggcaaccttaccctattttttacacaagaggctg 14983861  T
Q  283 tttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttaccc 352  Q
    |||| || |||| || ||||||| || || ||| ||||| |||||||||||||||  |||||||||||||    
T  14983860 tttcaaagacttgaatccgtgaccttccaatcatatgacaacaactttaccagttctgccaaggttaccc 14983791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 184 - 334
Target Start/End: Complemental strand, 25343312 - 25343162
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctat 283  Q
    ||||| ||||||||| | |||||||||| ||| |||||| || | ||| ||||| |||| || |||| || ||||||  |||||||||| ||||| ||||    
T  25343312 ggtgctctaaagctctcacatacgcaggatctaggaaggggtccaaccctttttggtgtattgtacgcagccttaccctgttttttacacaagagactat 25343213  T
Q  284 ttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttacca 334  Q
    ||||| ||||| |||| ||||| | |||||||| |||| ||||||||||||    
T  25343212 ttccagaacttgaacctgtgacctatcagtcacgtgacaacaactttacca 25343162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 191 - 355
Target Start/End: Complemental strand, 10660521 - 10660358
Alignment:
Q  191 taaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctatttccaaa 290  Q
    ||||||||||||||||||||| ||| |||||| ||  ||||||| || |||| || || | || | ||||   ||||||||| |||||| | ||||||      
T  10660521 taaagctcccgcatacgcagg-tcttggaaggggtctcaccattattggtgtattgtatgcagccataccctattttttacataagaggttgtttccagg 10660423  T
Q  291 acttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccctc 355  Q
    |||| |||  || || ||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  10660422 acttgaacatgtaacctttcagtcacatgacaacaactttaccagttgcgccaaggttacccctc 10660358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 191 - 355
Target Start/End: Complemental strand, 10874666 - 10874503
Alignment:
Q  191 taaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctatttccaaa 290  Q
    ||||||||||||||||||||| ||| |||||| ||  ||||||| || |||| || || | || | ||||   ||||||||| |||||| | ||||||      
T  10874666 taaagctcccgcatacgcagg-tcttggaaggggtctcaccattattggtgtattgtatgcagccataccctattttttacataagaggttgtttccagg 10874568  T
Q  291 acttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccctc 355  Q
    |||| |||  || || ||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  10874567 acttgaacatgtaacctttcagtcacatgacaacaactttaccagttgcgccaaggttacccctc 10874503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 186 - 355
Target Start/End: Complemental strand, 20405210 - 20405047
Alignment:
Q  186 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagtttttt-acaaaagaggctatt 284  Q
    |||||||||||||||||||| || ||||| ||||||| || |||||||| || |||| || |||| | |||||||  ||||||| ||| |||||||| ||    
T  20405210 tgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattagtgtattgtacgcaatcttaccctgtttttttacacaagaggctgtt 20405111  T
Q  285 tccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccctc 355  Q
    ||       ||  |||||||| || |||||||||||| ||||||||||||||| || ||||||||||||||    
T  20405110 tc-------taggcccgtgaccttccagtcacatgacaacaactttaccagttgcgtcaaggttacccctc 20405047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 184 - 288
Target Start/End: Original strand, 20639670 - 20639773
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctat 283  Q
    ||||||||||||||||||||||||||||||| ||||||| || |||||| |||| |||| || |||| || ||||||  |||||||||| |||||||| |    
T  20639670 ggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccacca-ttttggtgtattgtacgcagccttaccctgttttttacacaagaggctgt 20639768  T
Q  284 ttcca 288  Q
    |||||    
T  20639769 ttcca 20639773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 184 - 346
Target Start/End: Original strand, 487138 - 487306
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccat-------tttttgtgtgttatacgtagtcttacctagttttttacaaaag 276  Q
    ||||||||||||||||||||| |||||  || ||||||| || || ||||       |||| |||| || |||| ||  |||||| ||||| |||| |||    
T  487138 ggtgcactaaagctcccgcattcgcagaatccgggaaggggtcccgccatcccaccattttagtgtattgtacgcagctttaccttgttttatacacaag 487237  T
Q  277 aggctatttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaagg 346  Q
    ||| | ||||||| |||| |||||||||| ||||||||||||||| ||||||||||| ||||||||||||    
T  487238 aggttgtttccaagacttgaacccgtgacctttcagtcacatgacaacaactttacc-gttacgccaagg 487306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 183 - 321
Target Start/End: Complemental strand, 25463245 - 25463110
Alignment:
Q  183 tggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggcta 282  Q
    |||||||| |||||||||||||| |||||||| ||||||| || |||||||||   ||||||| |||| |  ||| || ||||||||||| |||||| |     
T  25463245 tggtgcac-aaagctcccgcatatgcagggtccgggaaggggtcccaccatttg--gtgtgttgtacgcaacctttcccagttttttacacaagaggttg 25463149  T
Q  283 tttccaaaacttaaacccgtgacatttcagtcacatgac 321  Q
    ||||||  |||| |||||||||| |||||||||||||||    
T  25463148 tttccaggacttgaacccgtgacctttcagtcacatgac 25463110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 184 - 355
Target Start/End: Original strand, 13256411 - 13256578
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctat 283  Q
    |||||||||||||||||||| | || ||||  ||||||| || |||| ||| || |||| || |||| || ||||||  |||||||||| ||||||||      
T  13256411 ggtgcactaaagctcccgcagatgcggggttcgggaaggggtcccactattattggtgtattgtacgcagccttaccctgttttttacacaagaggct-- 13256508  T
Q  284 ttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccctc 355  Q
      |||  |||| ||||  |||| || |||||||||||| ||||||||||||||| | |||||||||||||||    
T  13256509 --ccaggacttgaacctatgaccttccagtcacatgacaacaactttaccagttgcaccaaggttacccctc 13256578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 185 - 333
Target Start/End: Original strand, 20908649 - 20908797
Alignment:
Q  185 gtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctatt 284  Q
    |||||||||||||||||||||||||||||  ||||||| || |||||| |||| |||| || |||| || |||||||  ||||||| |||||| | | ||    
T  20908649 gtgcactaaagctcccgcatacgcagggttcgggaaggggtcccacca-ttttggtgtattgtacgcagccttaccttcttttttagaaaagacgatgtt 20908747  T
Q  285 tccaaaacttaaacccgtgaca-tttcagtcacatgaccacaactttacc 333  Q
    ||||  |||| |||  || ||| ||||||||||||||| |||||||||||    
T  20908748 tccatgacttgaacatgtaacattttcagtcacatgacaacaactttacc 20908797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 296 - 352
Target Start/End: Original strand, 5313116 - 5313172
Alignment:
Q  296 aacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttaccc 352  Q
    |||||||||| ||||| ||||||||| ||||||||||||||||||||||||||||||    
T  5313116 aacccgtgacctttcaatcacatgacaacaactttaccagttacgccaaggttaccc 5313172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 264 - 351
Target Start/End: Complemental strand, 14590882 - 14590795
Alignment:
Q  264 ttttttacaaaagaggctatttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacc 351  Q
    ||||||| | |||||||| |||| |  |||| || ||||||| ||||||||||||||| ||||||||||||||| |||||||||||||    
T  14590882 ttttttagacaagaggctgtttctaggacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacc 14590795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 191 - 329
Target Start/End: Original strand, 17043413 - 17043549
Alignment:
Q  191 taaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctatttccaaa 290  Q
    ||||||||| ||||| |||||||||||||||| || ||||||  ||| |||| || |||| || ||||||  || ||||||| |||||||| ||||||      
T  17043413 taaagctccagcatatgcagggtctgggaaggggtcccacca--tttggtgtattgtacgcagccttaccctgtattttacacaagaggctgtttccagg 17043510  T
Q  291 acttaaacccgtgacatttcagtcacatgaccacaactt 329  Q
    |||| |||| ||||| |||||||||| |||| |||||||    
T  17043511 acttgaacctgtgacctttcagtcacttgacaacaactt 17043549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 184 - 334
Target Start/End: Complemental strand, 19027971 - 19027823
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctat 283  Q
    ||||||||||||||||| ||||||||| |||||| |||| || ||||||   || |||| || |||| || ||||||  |||||||||| |||| | | |    
T  19027971 ggtgcactaaagctcccacatacgcagagtctggaaaggggtcccacca--attggtgtattgtacgcagccttaccctgttttttacacaagatgttgt 19027874  T
Q  284 ttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttacca 334  Q
    |||||  |||| |||||||||| |||||||||| |||| |||||| |||||    
T  19027873 ttccaggacttgaacccgtgacctttcagtcacgtgacaacaactctacca 19027823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 184 - 329
Target Start/End: Complemental strand, 54175188 - 54175043
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctggg-aaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggcta 282  Q
    |||||||||||||||||||||| |||||||| ||| |||| || ||||||||||  |||| || |||| || ||||||  |||||| ||| ||||||||     
T  54175188 ggtgcactaaagctcccgcatatgcagggtccggggaaggggtcccaccattttg-gtgtattgtacgcagccttaccctgttttt-acacaagaggctg 54175091  T
Q  283 ttt-ccaaaacttaaacccgtgacatttcagtcacatgaccacaactt 329  Q
    ||| |||  |||| || ||||||||||||||||||||||| |||||||    
T  54175090 ttttccaggacttgaatccgtgacatttcagtcacatgacaacaactt 54175043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 186 - 355
Target Start/End: Complemental strand, 37494972 - 37494805
Alignment:
Q  186 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctattt 285  Q
    |||||||||||||| ||||||||||||||  | |||| || |||||||||   || | || || | |  ||||||  |||||||||| |||||| | |||    
T  37494972 tgcactaaagctcctgcatacgcagggtcccgaaaggggtcccaccatttg--gtatattgtatgcaaccttaccctgttttttacacaagaggttgttt 37494875  T
Q  286 ccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccctc 355  Q
    |||  |||| |||| ||||| |||||||| |||| | ||||||||||||||| | |||||||||||||||    
T  37494874 ccaggacttgaacctgtgacctttcagtcgcatggcaacaactttaccagttgcaccaaggttacccctc 37494805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 184 - 355
Target Start/End: Original strand, 55766478 - 55766647
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctat 283  Q
    ||||||||||||||| |||||||||| |||| |||| || |||||||||||    |||| || |||| || ||||||  ||||   ||| ||||  || |    
T  55766478 ggtgcactaaagctctcgcatacgcaaggtccgggatggggttccaccattca--gtgtattgtacgcagccttaccctgtttac-acacaagaaactgt 55766574  T
Q  284 ttccaaaacttaaaccc-gtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccctc 355  Q
    ||||||||||| ||||| ||||| || | |||||||||| ||||||||||||||| || ||||||||||||||    
T  55766575 ttccaaaacttgaaccccgtgaccttccggtcacatgacaacaactttaccagttgcgtcaaggttacccctc 55766647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 296 - 352
Target Start/End: Original strand, 17315420 - 17315476
Alignment:
Q  296 aacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttaccc 352  Q
    |||||||||| ||||||||||||||| ||||||||||| ||| ||||||||||||||    
T  17315420 aacccgtgacctttcagtcacatgacaacaactttaccggttgcgccaaggttaccc 17315476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 184 - 317
Target Start/End: Original strand, 29207910 - 29208039
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctat 283  Q
    ||||||||| |||||||||||| |||||||| ||||||| || ||||||  ||| |||| || |||| || ||||||   | ||||||| ||||||| ||    
T  29207910 ggtgcactagagctcccgcatatgcagggtccgggaaggggtcccacca--tttggtgtattgtacgcagccttacc--ctgttttacacaagaggcaat 29208005  T
Q  284 ttccaaaacttaaacccgtgacatttcagtcaca 317  Q
    |||||  |||| |||||||||| |||||||||||    
T  29208006 ttccaggacttgaacccgtgacctttcagtcaca 29208039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 263 - 354
Target Start/End: Complemental strand, 54967067 - 54966977
Alignment:
Q  263 gttttttacaaaagaggctatttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccct 354  Q
    |||||||||| |||||| | |||||| ||||| |||  ||||| ||||||||||||||| ||||||||||| ||| |||||||||| |||||    
T  54967067 gttttttacacaagaggttctttccagaacttgaacatgtgacctttcagtcacatgacaacaactttacc-gttgcgccaaggttccccct 54966977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 184 - 234
Target Start/End: Original strand, 38755920 - 38755970
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccatt 234  Q
    ||||||||||||||||||||||||||||||| ||||||| || ||||||||    
T  38755920 ggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatt 38755970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 183 - 355
Target Start/End: Original strand, 55830732 - 55830902
Alignment:
Q  183 tggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggcta 282  Q
    |||||||||||||||| |||||||||| |||| |||| || |||||||||||    |||| || |||| ||  |||||  ||||   ||| ||||| ||     
T  55830732 tggtgcactaaagctctcgcatacgcaaggtccgggatggggttccaccattca--gtgtattgtacgcagcattaccctgtttac-acacaagagactg 55830828  T
Q  283 tttccaaaacttaaac-ccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccctc 355  Q
    |||||||||||| ||| ||||||| || |  ||||||||| ||||||||||||||| || ||||||||||||||    
T  55830829 tttccaaaacttgaactccgtgaccttccgatcacatgacaacaactttaccagttgcgtcaaggttacccctc 55830902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 183 - 232
Target Start/End: Original strand, 30690187 - 30690236
Alignment:
Q  183 tggtgcactaaagctcccgcatacgcagggtctgggaaggagttccacca 232  Q
    |||||||||||||||||||||||||||||||| ||||||| || ||||||    
T  30690187 tggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccacca 30690236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 186 - 234
Target Start/End: Original strand, 33836501 - 33836549
Alignment:
Q  186 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccatt 234  Q
    ||||||||||||||||||||||||||||| ||||||| || ||||||||    
T  33836501 tgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatt 33836549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 265 - 333
Target Start/End: Original strand, 42164239 - 42164307
Alignment:
Q  265 tttttacaaaagaggctatttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttacc 333  Q
    |||||||| |||||| | ||||||| |||| |||||||||| ||||||||||||||| |||| ||||||    
T  42164239 tttttacacaagaggttgtttccaagacttgaacccgtgacctttcagtcacatgacaacaattttacc 42164307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 184 - 235
Target Start/End: Complemental strand, 11394975 - 11394924
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattt 235  Q
    ||||||||||||||||||||||||||||||| || |||| || |||||||||    
T  11394975 ggtgcactaaagctcccgcatacgcagggtccggaaaggggtcccaccattt 11394924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 184 - 235
Target Start/End: Complemental strand, 11404702 - 11404651
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattt 235  Q
    ||||||||||||||||||||||||||||||| || |||| || |||||||||    
T  11404702 ggtgcactaaagctcccgcatacgcagggtccggaaaggggtcccaccattt 11404651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 190 - 333
Target Start/End: Original strand, 39029078 - 39029220
Alignment:
Q  190 ctaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctatttccaa 289  Q
    |||||||||||||||| |||||||| || |||  || ||||||||||  |||| || |||  || ||||||  |||||||||| |||||||| |||||||    
T  39029078 ctaaagctcccgcatatgcagggtccggaaagtggtcccaccattttc-gtgtattgtacacagccttaccctgttttttacacaagaggctgtttccaa 39029176  T
Q  290 aacttaaacccgtgacatttcagtcacatgaccacaactttacc 333  Q
      ||| ||||  |||| ||| ||||||| ||| |||||||||||    
T  39029177 ggcttgaacctatgaccttttagtcacacgacaacaactttacc 39029220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 190 - 233
Target Start/End: Complemental strand, 44718684 - 44718641
Alignment:
Q  190 ctaaagctcccgcatacgcagggtctgggaaggagttccaccat 233  Q
    ||||||||||||||||||||||||||||||||| || |||||||    
T  44718684 ctaaagctcccgcatacgcagggtctgggaaggggtcccaccat 44718641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 186 - 237
Target Start/End: Original strand, 47482864 - 47482915
Alignment:
Q  186 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttt 237  Q
    ||||| ||||||||||||||||||||||| ||||||| || |||||||||||    
T  47482864 tgcaccaaagctcccgcatacgcagggtccgggaaggggtcccaccattttt 47482915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 222
Target Start/End: Complemental strand, 35532115 - 35532077
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaagg 222  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  35532115 ggtgcactaaagctcccgcatacgcagggtccgggaagg 35532077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 222
Target Start/End: Original strand, 40553949 - 40553987
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaagg 222  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  40553949 ggtgcactaaagctcccgcatacgcagggtccgggaagg 40553987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 234
Target Start/End: Original strand, 50555668 - 50555718
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccatt 234  Q
    ||||||||||| |||| |||||||||||||| ||||||| |||||||||||    
T  50555668 ggtgcactaaaactcctgcatacgcagggtccgggaaggggttccaccatt 50555718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 281
Target Start/End: Original strand, 51865050 - 51865145
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggct 281  Q
    |||||| |||||||||||||||||||||||| ||||||| |  ||||||  ||| |||| || |||| || ||||||  |||||||||| ||||||||    
T  51865050 ggtgcaataaagctcccgcatacgcagggtccgggaaggggccccacca--tttggtgtattgtacgcagccttaccatgttttttacacaagaggct 51865145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 184 - 233
Target Start/End: Complemental strand, 32484356 - 32484307
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccat 233  Q
    |||||||||||||||||||||| |||||||| ||||||| || |||||||    
T  32484356 ggtgcactaaagctcccgcatatgcagggtccgggaaggggtcccaccat 32484307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 186 - 234
Target Start/End: Complemental strand, 8820629 - 8820581
Alignment:
Q  186 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccatt 234  Q
    ||||||||| ||| ||||||||||||||||||||||| || ||||||||    
T  8820629 tgcactaaaactctcgcatacgcagggtctgggaaggggtcccaccatt 8820581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 312 - 352
Target Start/End: Complemental strand, 18969738 - 18969698
Alignment:
Q  312 gtcacatgaccacaactttaccagttacgccaaggttaccc 352  Q
    |||||||||| ||||||||||||||| ||||||||||||||    
T  18969738 gtcacatgacaacaactttaccagttgcgccaaggttaccc 18969698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 260
Target Start/End: Complemental strand, 20225199 - 20225123
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacc 260  Q
    |||||||||||||||||||||| || ||||| ||||||| || |||||||| || |||| || |||| || ||||||    
T  20225199 ggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttacc 20225123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 185 - 236
Target Start/End: Complemental strand, 21489210 - 21489159
Alignment:
Q  185 gtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccatttt 236  Q
    |||||| ||||||||||||||||||||||  ||||||| || ||||||||||    
T  21489210 gtgcacgaaagctcccgcatacgcagggttcgggaaggggtcccaccatttt 21489159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 184 - 235
Target Start/End: Complemental strand, 25629172 - 25629121
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattt 235  Q
    |||||||||||||||||||||| | |||||| ||||||| || |||||||||    
T  25629172 ggtgcactaaagctcccgcatatgtagggtccgggaaggggtcccaccattt 25629121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 184 - 235
Target Start/End: Complemental strand, 28494274 - 28494223
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattt 235  Q
    ||||||||| |||||||||||| ||||| |||||||||| || |||||||||    
T  28494274 ggtgcactagagctcccgcatatgcaggatctgggaaggggtcccaccattt 28494223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 184 - 235
Target Start/End: Complemental strand, 38786732 - 38786681
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattt 235  Q
    ||||||||| |||||||||||| |||||||| ||||||| || |||||||||    
T  38786732 ggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccattt 38786681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 188 - 242
Target Start/End: Complemental strand, 16494338 - 16494284
Alignment:
Q  188 cactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgt 242  Q
    |||||||||| |||||||| ||||||||||||| | || ||||||||||| ||||    
T  16494338 cactaaagcttccgcatacacagggtctgggaaagggtcccaccatttttggtgt 16494284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 184 - 234
Target Start/End: Complemental strand, 25388299 - 25388249
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccatt 234  Q
    |||||||||||||||  |||||||||||||| ||||||| || ||||||||    
T  25388299 ggtgcactaaagctcatgcatacgcagggtccgggaaggggtcccaccatt 25388249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 183 - 213
Target Start/End: Original strand, 37038134 - 37038164
Alignment:
Q  183 tggtgcactaaagctcccgcatacgcagggt 213  Q
    |||||||||||||||||||||||||||||||    
T  37038134 tggtgcactaaagctcccgcatacgcagggt 37038164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 190 - 236
Target Start/End: Original strand, 49938611 - 49938657
Alignment:
Q  190 ctaaagctcccgcatacgcagggtctgggaaggagttccaccatttt 236  Q
    |||||||||||||||| ||||||| |||||||| || ||||||||||    
T  49938611 ctaaagctcccgcatatgcagggtatgggaaggggtcccaccatttt 49938657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 301 - 354
Target Start/End: Original strand, 20373921 - 20373974
Alignment:
Q  301 gtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccct 354  Q
    ||||||||||||||| ||||  ||||||| ||||||| |||||| |||||||||    
T  20373921 gtgacatttcagtcatatgagaacaacttgaccagttgcgccaaagttacccct 20373974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 185 - 321
Target Start/End: Complemental strand, 7038174 - 7038041
Alignment:
Q  185 gtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctatt 284  Q
    ||||||||||||||| | |||||||||||| ||| ||| |  ||||||||||  |||| || |||| |||||||||   ||||||||| |||| ||| ||    
T  7038174 gtgcactaaagctcc-gtatacgcagggtccgggtaggtgccccaccattttg-gtgtattgtacgaagtcttaccctattttttacacaagaagctgtt 7038077  T
Q  285 tccaaaacttaaacccgtgacatttcagtcacatgac 321  Q
    || |  |||| |||| ||||| |||||||||||||||    
T  7038076 tc-aggacttgaacctgtgacctttcagtcacatgac 7038041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 184 - 232
Target Start/End: Complemental strand, 19028034 - 19027986
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccacca 232  Q
    |||||||||||||||||||||| |  ||||| |||||||||| ||||||    
T  19028034 ggtgcactaaagctcccgcataagtggggtccgggaaggagtcccacca 19027986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 188 - 236
Target Start/End: Original strand, 36816400 - 36816448
Alignment:
Q  188 cactaaagctcccgcatacgcagggtctgggaaggagttccaccatttt 236  Q
    ||||||||||||||||||| |||||||  ||||||||| ||||| ||||    
T  36816400 cactaaagctcccgcatacacagggtccaggaaggagtcccaccttttt 36816448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 185 - 326
Target Start/End: Original strand, 41018807 - 41018945
Alignment:
Q  185 gtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtctta-cctagttttttacaaaagaggctat 283  Q
    |||||||||||| ||  |||||||| |||||||||||| || ||||  | ||| |||| || ||||||| |||| ||||   ||||||| |||||| | |    
T  41018807 gtgcactaaagcccctccatacgcaaggtctgggaaggggtcccac--tatttggtgtattgtacgtagccttacccta--attttacacaagaggttgt 41018902  T
Q  284 ttccaaaacttaaacccgtgacatttcagtcacatgaccacaa 326  Q
    |||||  |||| |||||||||| |||||||||| |||| ||||    
T  41018903 ttccaggacttgaacccgtgacctttcagtcacgtgacaacaa 41018945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 84; Significance: 8e-40; HSPs: 60)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 184 - 355
Target Start/End: Complemental strand, 42805649 - 42805478
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctat 283  Q
    |||||||||||||||||||||| || ||||| ||||||| || |||||||| || |||| || |||  || ||||||  |||||||||| |||||||| |    
T  42805649 ggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacacagccttaccctgttttttacacaagaggctgt 42805550  T
Q  284 ttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccctc 355  Q
    |||||  |||| |||||||||| || |||||||||||| |||||||||||||||||||||||||||||||||    
T  42805549 ttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttacgccaaggttacccctc 42805478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 186 - 355
Target Start/End: Complemental strand, 42798790 - 42798623
Alignment:
Q  186 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctattt 285  Q
    ||||||| |||||||||||| |||||||| ||||| | || |||||||||   |||| || |||| || ||||||| |||||||||| ||||| || |||    
T  42798790 tgcactatagctcccgcatatgcagggtccgggaaagggtcccaccatttg--gtgtattgtacgcagccttaccttgttttttacacaagagactgttt 42798693  T
Q  286 ccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccctc 355  Q
    |||| |||| |||||||||| || |||||||||||| ||||||||||||||| |||||||||||||||||    
T  42798692 ccaagacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgccaaggttacccctc 42798623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 184 - 355
Target Start/End: Original strand, 2541031 - 2541201
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctat 283  Q
    ||||||||||||||||||||||||||||| | ||||||| || |||||||||   |||| |  |||| || ||||||  |||||||||| |||||||| |    
T  2541031 ggtgcactaaagctcccgcatacgcagggaccgggaaggggtcccaccatttg--gtgtatagtacgcagccttaccctgttttttacacaagaggctgt 2541128  T
Q  284 ttccaaaacttaaacccgtgacatttc-agtcacatgaccacaactttaccagttacgccaaggttacccctc 355  Q
    |||||  |||| |||||||||| |||| ||||||||||| ||||||||||||||| |||||||||||||||||    
T  2541129 ttccaggacttgaacccgtgacctttccagtcacatgacaacaactttaccagttgcgccaaggttacccctc 2541201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 184 - 355
Target Start/End: Original strand, 22698979 - 22699151
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaag-gagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggcta 282  Q
    ||||||||| ||||||||||||| ||||||| |||||  | || ||||||||||| |||| || |||| |||||||||  |||||||||| ||||| |||    
T  22698979 ggtgcactatagctcccgcatacacagggtccgggaaaagggtcccaccatttttggtgtattgtacgcagtcttaccctgttttttacacaagagacta 22699078  T
Q  283 tttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccctc 355  Q
    ||||||  |||| ||||| | || ||||||||||||||| ||||||||||||||| || ||||||||||||||    
T  22699079 tttccaggacttgaacccataacctttcagtcacatgacaacaactttaccagttgcgtcaaggttacccctc 22699151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 184 - 355
Target Start/End: Complemental strand, 43557598 - 43557426
Alignment:
Q  184 ggtgcactaaa-gctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggcta 282  Q
    ||||||||||| |||||||||||||||| ||| |||| || || |||||||| || |||| || |||| || |||||   |||||||||| ||||||||     
T  43557598 ggtgcactaaaagctcccgcatacgcagagtccgggagggggtcccaccattattggtgtattgtacgcagccttactctgttttttacacaagaggctg 43557499  T
Q  283 tttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccctc 355  Q
    ||||||  |||| ||||| |||| ||||||||||||||| ||||||||||||||| || ||||||||||||||    
T  43557498 tttccaggacttgaacccatgacctttcagtcacatgacaacaactttaccagttgcggcaaggttacccctc 43557426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 184 - 356
Target Start/End: Complemental strand, 47716584 - 47716412
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctat 283  Q
    ||||||| |||||||||||||| || ||||| ||||||| || |||||||| || |||| || |||| || ||||||  |||||||||| |||||||| |    
T  47716584 ggtgcaccaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaagaggctgt 47716485  T
Q  284 ttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccctcg 356  Q
    |||||  |||| |||||||||| || |||||||||| | |||||||| ||||||  |||||||||||||||||    
T  47716484 ttccaggacttgaacccgtgaccttccagtcacatggcaacaacttttccagttgtgccaaggttacccctcg 47716412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 184 - 351
Target Start/End: Original strand, 14732833 - 14732999
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctat 283  Q
    ||||||||||||||||||||||  ||||||  ||||||||||| |||||||||| |||| ||  ||| || ||||||  ||||||||||   |||||| |    
T  14732833 ggtgcactaaagctcccgcataaacagggttcgggaaggagtttcaccatttttggtgtattg-acgcagccttaccctgttttttacatgggaggctgt 14732931  T
Q  284 ttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacc 351  Q
    |||||  |||| ||||| |||| ||||||||||||||| ||||||||||||||| |||||||||||||    
T  14732932 ttccaggacttgaacccatgacttttcagtcacatgacaacaactttaccagttgcgccaaggttacc 14732999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 184 - 355
Target Start/End: Original strand, 48735134 - 48735302
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctat 283  Q
    ||||||||| |||||||||||| |||||||| ||||||| || |||||||||   |||| || |||| || ||||||  || ||||||| |||||| | |    
T  48735134 ggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttg--gtgtattgtacgcagccttacc--gtgttttacacaagaggttgt 48735229  T
Q  284 ttccaaa-acttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccctc 355  Q
    ||||||  |||| |||||||||| ||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  48735230 ttccaaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacccctc 48735302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 184 - 355
Target Start/End: Original strand, 21172021 - 21172188
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctat 283  Q
    ||||||||| |||||||||||| |||||||| ||||||| || |||||||||   |||| || |||| || ||||||  |||||  ||| |||||||| |    
T  21172021 ggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttg--gtgtattgtacgcagccttaccctgtttt--acacaagaggctgt 21172116  T
Q  284 ttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccctc 355  Q
    |||||  |||| |||||||||| ||||||| ||||||| ||||||||||||||| |||||||||||||||||    
T  21172117 ttccaggacttgaacccgtgacctttcagttacatgacaacaactttaccagttgcgccaaggttacccctc 21172188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 184 - 348
Target Start/End: Original strand, 11617600 - 11617762
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctat 283  Q
    |||||||||||| ||| ||||||||||||||  |||||| || |||||||||   |||| || |||| |||||||||  |||||||||| |||||| | |    
T  11617600 ggtgcactaaaggtcctgcatacgcagggtccaggaaggggtcccaccatttg--gtgtattgtacgcagtcttaccctgttttttacacaagaggttgt 11617697  T
Q  284 ttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggtt 348  Q
    |||||  |||| |||| ||||| ||||||||||||||| ||||||||||||||| |||| |||||    
T  11617698 ttccaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccgaggtt 11617762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 184 - 355
Target Start/End: Complemental strand, 32758382 - 32758215
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctat 283  Q
    ||||||||| |||||||||||| |||||||| ||||||| || |||||||||   |||| || |||  || ||||||  |||||  ||| |||||||| |    
T  32758382 ggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttg--gtgtattgtacacagccttaccctgtttt--acacaagaggctgt 32758287  T
Q  284 ttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccctc 355  Q
    |||||  |||| |||| ||||| ||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  32758286 ttccaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacccctc 32758215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 186 - 354
Target Start/End: Original strand, 5180169 - 5180337
Alignment:
Q  186 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctattt 285  Q
    |||| ||||||||| ||||||| ||| | ||| |||| || | | ||||||| ||||||| |||  |||||||||  |||||| ||| |||||||| |||    
T  5180169 tgcattaaagctcctgcatacgtaggatttggaaaggggtccaatcatttttggtgtgttgtacacagtcttaccctgtttttgacacaagaggctgttt 5180268  T
Q  286 ccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccct 354  Q
    ||| || || ||||| |||| ||||||||||||||| ||||||||||||||| || |||||||||||||    
T  5180269 ccagaagttgaacccttgacctttcagtcacatgacaacaactttaccagttgcgtcaaggttacccct 5180337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 184 - 349
Target Start/End: Complemental strand, 40463999 - 40463837
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctat 283  Q
    |||||||| |||||||||||||||||||||| | ||||| || |||||||||   |||| ||||||| || |||||| ||||||| ||| ||||| || |    
T  40463999 ggtgcactgaagctcccgcatacgcagggtccgagaaggggtcccaccatttg--gtgtattatacgcagccttacccagttttt-acacaagagactgt 40463903  T
Q  284 ttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggtta 349  Q
    ||| |  |||| |||||||||| || |||||||||||| ||||||||||| ||| |||||||||||    
T  40463902 ttctatgacttgaacccgtgaccttacagtcacatgacaacaactttaccggttgcgccaaggtta 40463837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 183 - 355
Target Start/End: Complemental strand, 42476995 - 42476827
Alignment:
Q  183 tggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggcta 282  Q
    |||||||||| |||||||||||| |||| | || |||||| || |||||||||   |||| || |||| || ||||||| |||||  ||| ||||| ||     
T  42476995 tggtgcactagagctcccgcatatgcagagcctaggaaggggtcccaccatttg--gtgtattgtacgcagccttaccttgtttt--acacaagagactg 42476900  T
Q  283 tttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccctc 355  Q
    |||||| ||||| || ||||||| ||| ||||||||||| |||||||||||||||||||||| ||||||||||    
T  42476899 tttccagaacttgaatccgtgaccttttagtcacatgacaacaactttaccagttacgccaatgttacccctc 42476827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 201 - 355
Target Start/End: Complemental strand, 46354302 - 46354148
Alignment:
Q  201 gcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctatttccaaaacttaaaccc 300  Q
    ||||| || ||||| ||||||| || |||||||| || |||| || |||| || ||||||  |||||||||| |||||| | ||||||  |||| |||||    
T  46354302 gcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaagaggttgtttccaggacttgaaccc 46354203  T
Q  301 gtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccctc 355  Q
    ||||| || || ||||||||| ||||||||||||||| |||||||||||||||||    
T  46354202 gtgaccttccaatcacatgacaacaactttaccagttgcgccaaggttacccctc 46354148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 185 - 348
Target Start/End: Original strand, 10693086 - 10693245
Alignment:
Q  185 gtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctatt 284  Q
    |||||||| |||||||||||| |||||||| ||||||| || |||||||||   |||| || |||| || ||||||   | ||||||| |||||||| ||    
T  10693086 gtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttg--gtgtattgtacgcagccttaccc--tcttttacacaagaggctgtt 10693181  T
Q  285 tccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggtt 348  Q
    ||||  |||| |||||||||| ||||||||||||||| |||||||||| |||| ||||||||||    
T  10693182 tccaggacttgaacccgtgacctttcagtcacatgacaacaactttactagttgcgccaaggtt 10693245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 184 - 355
Target Start/End: Original strand, 47077867 - 47078034
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttac-ctagttttttacaaaagaggcta 282  Q
    ||||||||| |||||||||||| | ||||| |||||||| || ||||||||||  |||| || |||| |   |||| |||   ||||||| ||||| ||     
T  47077867 ggtgcactagagctcccgcatatgtagggtttgggaaggggtcccaccatttt--gtgtattgtacgcaactttactcta---ttttacacaagagactg 47077961  T
Q  283 tttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccctc 355  Q
    ||||||  |||| |||||||||| ||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  47077962 tttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacccctc 47078034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 184 - 344
Target Start/End: Original strand, 19426902 - 19427059
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctat 283  Q
    |||||||| |||||| |||||| |||||||| | ||||| || |||||||||   |||| || |||| |||||||||   ||||||||| |||||||| |    
T  19426902 ggtgcactgaagctctcgcatatgcagggtccgagaagg-gtcccaccatttg--gtgtattgtacgcagtcttaccctattttttacacaagaggctgt 19426998  T
Q  284 ttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaa 344  Q
    |||||  |||| |||||||||| |||| |||||||||| ||||||||||||||| ||||||    
T  19426999 ttccaggacttgaacccgtgacctttcggtcacatgacaacaactttaccagttgcgccaa 19427059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 186 - 346
Target Start/End: Original strand, 23419688 - 23419845
Alignment:
Q  186 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctattt 285  Q
    ||||||||||| |||||| ||||| ||||| |||||| || |||||||||   |||| || |||| |||||||||  |||||||||| |||||||| |||    
T  23419688 tgcactaaagcccccgcacacgcaaggtctaggaaggggtcccaccatttg--gtgtattgtacgcagtcttaccctgttttttacacaagaggctgttt 23419785  T
Q  286 ccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaagg 346  Q
    ||| ||||| |||| ||||| ||| |||||||||||  |||||||||| ||| ||||||||    
T  23419786 ccagaacttgaacctgtgaccttttagtcacatgacagcaactttacc-gttgcgccaagg 23419845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 184 - 355
Target Start/End: Original strand, 35334828 - 35334995
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctat 283  Q
    |||||||||||||||| |||||||||||||| ||||||| || ||||||||    |||| || |||  |||||||||  ||||||||||  |||  || |    
T  35334828 ggtgcactaaagctcctgcatacgcagggtccgggaaggggtcccaccattcg--gtgtattgtacacagtcttaccctgttttttacacgaga--ctgt 35334923  T
Q  284 ttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccctc 355  Q
    |||||  |||| ||| |||||| || |||||||||||| ||||||||||||||| ||||||||||| |||||    
T  35334924 ttccaggacttgaactcgtgaccttccagtcacatgacaacaactttaccagttgcgccaaggttatccctc 35334995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 184 - 347
Target Start/End: Complemental strand, 27629757 - 27629596
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctat 283  Q
    |||||||| ||||| ||||||| |||||| | ||||||| || |||||||||   |||| || |||| |  ||||||  |||||||||| |||||||| |    
T  27629757 ggtgcactgaagctaccgcatatgcagggcccgggaaggggtcccaccatttg--gtgtattttacgcaaccttaccctgttttttacacaagaggctgt 27629660  T
Q  284 ttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggt 347  Q
    |||||  |||| |||||||||| |||| |||| ||||| ||||||||||||||| |||||||||    
T  27629659 ttccaggacttgaacccgtgacctttcggtcaaatgacaacaactttaccagttgcgccaaggt 27629596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 265 - 355
Target Start/End: Original strand, 42495926 - 42496016
Alignment:
Q  265 tttttacaaaagaggctatttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccctc 355  Q
    |||||| | |||||||| ||||||  |||| |||||||||| ||||||||| ||||| ||||||||||||||| |||||||||||||||||    
T  42495926 tttttatacaagaggctgtttccaggacttgaacccgtgacctttcagtcatatgacaacaactttaccagttgcgccaaggttacccctc 42496016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 183 - 335
Target Start/End: Original strand, 33871921 - 33872070
Alignment:
Q  183 tggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggcta 282  Q
    |||||||||||||||| ||||||| ||||||||||||||| || ||||||  ||| |||| || |||| || |||| |  | |||||||| |||||| |     
T  33871921 tggtgcactaaagctctcgcatacacagggtctgggaaggggtcccacca--tttggtgtattgtacgcagccttatcctg-tttttacacaagaggttg 33872017  T
Q  283 tttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccag 335  Q
    ||||||  |||| |||||| ||| ||||||||||||||| |||||||||||||    
T  33872018 tttccaggacttgaacccgcgacctttcagtcacatgacaacaactttaccag 33872070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 291 - 355
Target Start/End: Complemental strand, 7193103 - 7193039
Alignment:
Q  291 acttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccctc 355  Q
    |||| |||||||||| ||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  7193103 acttgaacccgtgacctttcagtcacatgacaacaactttacaagttacgccaaggttacccctc 7193039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 181 - 334
Target Start/End: Complemental strand, 39124021 - 39123865
Alignment:
Q  181 cttggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttaccta---gttttttacaaaaga 277  Q
    |||||||||| ||||||||| ||||||||||||| ||||||| || ||||||||||| |||| || |||| || ||| ||||     |||||||| ||||    
T  39124021 cttggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttttacacaaga 39123922  T
Q  278 ggctatttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttacca 334  Q
    | |  |||| |  |||| |||||||| | ||||||||||||||| ||||||||||||    
T  39123921 gaccgtttctaggacttgaacccgtgtcgtttcagtcacatgacaacaactttacca 39123865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 265 - 354
Target Start/End: Complemental strand, 18327078 - 18326989
Alignment:
Q  265 tttttacaaaagaggctatttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccct 354  Q
    |||||||| |||||||| |||||   |||| |||||||||| ||  ||||||||||| ||||||||||||||| ||||||||||||||||    
T  18327078 tttttacacaagaggctgtttccgggacttgaacccgtgaccttcaagtcacatgacaacaactttaccagttgcgccaaggttacccct 18326989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 192 - 346
Target Start/End: Original strand, 28362165 - 28362316
Alignment:
Q  192 aaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctatttccaaaa 291  Q
    ||||||||| |||| ||| |||||||||||| || |||||||||   |||| || |||| || |||||| ||||||||||| |||||||  |||| |  |    
T  28362165 aaagctcccacatatgcaaggtctgggaaggggtcccaccatttg--gtgtattgtacgcagccttaccaagttttttacacaagaggcagtttctagga 28362262  T
Q  292 cttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaagg 346  Q
    ||| |||| ||||| |||||| |||||||| ||||||||||| ||| ||||||||    
T  28362263 cttgaacctgtgacctttcagccacatgacaacaactttacc-gttgcgccaagg 28362316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 189 - 355
Target Start/End: Original strand, 34626225 - 34626388
Alignment:
Q  189 actaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctatttcca 288  Q
    |||||||||||||||||||||||||| |||||||  | |||||||||   |||| ||  ||| || ||||||  |||||| ||| | |||||| ||||||    
T  34626225 actaaagctcccgcatacgcagggtccgggaagggatcccaccatttg--gtgtattgaacgcagccttaccctgttttt-acacaggaggctgtttcca 34626321  T
Q  289 aaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccctc 355  Q
      |||| || | ||| | ||||| ||||||||| ||||||||||||||| ||| |||||||||||||    
T  34626322 ggacttgaatctgtggcctttcaatcacatgacaacaactttaccagttgcgctaaggttacccctc 34626388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 183 - 238
Target Start/End: Original strand, 45018934 - 45018989
Alignment:
Q  183 tggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccatttttt 238  Q
    |||||||||||||||||||||||||||||||| ||||||| ||||||||| |||||    
T  45018934 tggtgcactaaagctcccgcatacgcagggtccgggaaggggttccaccagttttt 45018989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 264 - 350
Target Start/End: Original strand, 7794596 - 7794682
Alignment:
Q  264 ttttttacaaaagaggctatttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttac 350  Q
    ||||||||| |||||||| ||||||  |||| |||||||||| || ||||||||| || ||||||||||||||| ||| ||||||||    
T  7794596 ttttttacataagaggctgtttccaggacttgaacccgtgaccttccagtcacataacaacaactttaccagttgcgctaaggttac 7794682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 184 - 305
Target Start/End: Complemental strand, 7879761 - 7879642
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctat 283  Q
    |||||||| |||||||||||||||||||||| ||||||| || ||||||  ||| |||| || |||| || ||||||| |||||||||| |||||  | |    
T  7879761 ggtgcactgaagctcccgcatacgcagggtccgggaaggggtcccacca--tttggtgtattgtacgcagccttaccttgttttttacacaagagattgt 7879664  T
Q  284 ttccaaaacttaaacccgtgac 305  Q
    |||||  |||| ||||||||||    
T  7879663 ttccaggacttgaacccgtgac 7879642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 196 - 333
Target Start/End: Original strand, 14099030 - 14099165
Alignment:
Q  196 ctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctatttccaaaactta 295  Q
    |||| ||||||| |||||  ||||||| || |||||||||   |||| || |||| ||||||| |  |||||||||| || ||||||||||||  ||||     
T  14099030 ctcctgcatacgtagggttcgggaaggggtcccaccatttg--gtgtattgtacgcagtcttaacctgttttttacacaaaaggctatttccaggacttc 14099127  T
Q  296 aacccgtgacatttcagtcacatgaccacaactttacc 333  Q
    ||||| |||| ||||||||||||||| |||||||||||    
T  14099128 aacccatgacctttcagtcacatgacaacaactttacc 14099165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 196 - 333
Target Start/End: Original strand, 14409047 - 14409182
Alignment:
Q  196 ctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctatttccaaaactta 295  Q
    |||| ||||||| |||||  ||||||| || |||||||||   |||| || |||| ||||||| |  |||||||||| || ||||||||||||  ||||     
T  14409047 ctcctgcatacgtagggttcgggaaggggtcccaccatttg--gtgtattgtacgcagtcttaacctgttttttacacaaaaggctatttccaggacttc 14409144  T
Q  296 aacccgtgacatttcagtcacatgaccacaactttacc 333  Q
    ||||| |||| ||||||||||||||| |||||||||||    
T  14409145 aacccatgacctttcagtcacatgacaacaactttacc 14409182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 184 - 327
Target Start/End: Original strand, 42391112 - 42391251
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctat 283  Q
    ||||||||| |||||||||||| |||||||| ||||||| || ||||||  ||| |||| || |||| || ||||||   | ||||||| |||| ||| |    
T  42391112 ggtgcactagagctcccgcatatgcagggtccgggaaggggtcccacca--tttggtgtattgtacgcagccttacc--ctgttttacacaagaagctgt 42391207  T
Q  284 ttccaaaacttaaacccgtgacatttcagtcacatgaccacaac 327  Q
    |||||  |||| |||||||||| ||||||||||||||| |||||    
T  42391208 ttccaggacttgaacccgtgacctttcagtcacatgacaacaac 42391251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 184 - 321
Target Start/End: Complemental strand, 18747610 - 18747474
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtctta-cctagttttttacaaaagaggcta 282  Q
    ||||||||||||||||||||||||||||||   |||||| || ||||||   || |||| ||||||| || |||| |||  ||||||||| || |||||     
T  18747610 ggtgcactaaagctcccgcatacgcagggttcaggaaggggtcccacca--attggtgtattatacgcagccttaccctgcttttttacacaaaaggctg 18747513  T
Q  283 tttccaaaacttaaacccgtgacatttcagtcacatgac 321  Q
    ||||||| |||| | |||||||| |||||||||| ||||    
T  18747512 tttccaagacttgatcccgtgacctttcagtcacgtgac 18747474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 184 - 352
Target Start/End: Complemental strand, 25198849 - 25198679
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagtttttt-acaaaagaggcta 282  Q
    ||||||||||||||| | |||||| ||||||||||||||  | | |||||||   |||  |||||||  ||||||||| ||||||| ||| || || ||     
T  25198849 ggtgcactaaagctctcacatacgaagggtctgggaagggatcctaccattta--gtgcattatacgcggtcttaccttgtttttttacacaaaagactg 25198752  T
Q  283 tttccaaaactta---aacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttaccc 352  Q
    ||||||| ||||    | ||| |||  ||||||||| ||||| ||||||||||||||||||||||||||||||    
T  25198751 tttccaagactttttgatcccatgatctttcagtcatatgacaacaactttaccagttacgccaaggttaccc 25198679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 266 - 355
Target Start/End: Complemental strand, 13805145 - 13805057
Alignment:
Q  266 ttttacaaaagaggctatttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccctc 355  Q
    |||||||  ||||||||||||||  |||| ||||||| || ||||||||||||||| |||||||||||| || |||||||| | ||||||    
T  13805145 ttttacaccagaggctatttccaggacttgaacccgttacctttcagtcacatgacaacaactttacca-ttgcgccaaggctccccctc 13805057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 193 - 333
Target Start/End: Complemental strand, 19266564 - 19266426
Alignment:
Q  193 aagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctatttccaaaac 292  Q
    |||||||||||||||||||||| |||||||  | |||| ||||   |||| || |||| || ||||||  |||||||||  ||| |||||||| ||  ||    
T  19266564 aagctcccgcatacgcagggtccgggaagggatcccacaatttg--gtgtattgtacgcagccttaccctgttttttacgcaagtggctattttcaggac 19266467  T
Q  293 ttaaacccgtgacatttcagtcacatgaccacaactttacc 333  Q
    || |||||  ||| ||||||||||||||| |||||||||||    
T  19266466 ttgaacccacgacctttcagtcacatgacaacaactttacc 19266426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 187 - 260
Target Start/End: Complemental strand, 33500635 - 33500562
Alignment:
Q  187 gcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacc 260  Q
    ||||| ||| |||||||||||||||||| ||||||| || |||||||||||||||| |  |||| |||||||||    
T  33500635 gcactgaagatcccgcatacgcagggtccgggaaggggtcccaccattttttgtgtatagtacgcagtcttacc 33500562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 263 - 355
Target Start/End: Complemental strand, 21447636 - 21447544
Alignment:
Q  263 gttttttacaaaagaggctatttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccctc 355  Q
    |||||||||| |||||||| ||| ||| |||| || ||||||| || || | ||||||| |||| |||| ||||| |||||||||||||||||    
T  21447636 gttttttacacaagaggctgttttcaagacttgaatccgtgaccttccaattacatgacaacaaatttatcagttgcgccaaggttacccctc 21447544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 264 - 347
Target Start/End: Complemental strand, 5814516 - 5814433
Alignment:
Q  264 ttttttacaaaagaggctatttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggt 347  Q
    ||||||||| |||||| | |||||||||||| |||||||||| || || |||||| || |||||||||||  || |||||||||    
T  5814516 ttttttacataagaggttctttccaaaacttgaacccgtgactttccaatcacataacaacaactttaccgattgcgccaaggt 5814433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 184 - 219
Target Start/End: Complemental strand, 36602570 - 36602535
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctggga 219  Q
    ||||||||||||||||||||||||||||||||||||    
T  36602570 ggtgcactaaagctcccgcatacgcagggtctggga 36602535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 320
Target Start/End: Complemental strand, 29907541 - 29907408
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttac-ctagttttttacaaaagaggcta 282  Q
    |||||||||||||||||||||||  |||||| |||| || || ||||||||||  |||| ||  ||| || ||||| ||| ||||||||| ||||||||     
T  29907541 ggtgcactaaagctcccgcatac--agggtccgggatggggtcccaccattttg-gtgtattgaacgcagccttacacta-ttttttacacaagaggctg 29907446  T
Q  283 tttccaaaacttaaacccgtgacatttcagtcacatga 320  Q
    |||| |  |||| |||||||||| ||||||||||||||    
T  29907445 tttctaggacttgaacccgtgacctttcagtcacatga 29907408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 222
Target Start/End: Original strand, 42495874 - 42495912
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaagg 222  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  42495874 ggtgcactaaagctcccgcatacgcagggtccgggaagg 42495912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 184 - 333
Target Start/End: Complemental strand, 16341402 - 16341254
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctat 283  Q
    ||||||| |||||||||||||| |   |||| ||||||  |  |||||| |||| |||| || ||||||| ||||||  |||||||||| |||||||| |    
T  16341402 ggtgcaccaaagctcccgcatatgataggtccgggaagagggcccacca-ttttggtgtattgtacgtagccttaccctgttttttacacaagaggctgt 16341304  T
Q  284 ttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttacc 333  Q
    ||| | ||||| |||||||||| |||||   ||||||  |||||||||||    
T  16341303 ttctagaacttgaacccgtgacctttcaaatacatgataacaactttacc 16341254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 185 - 234
Target Start/End: Original strand, 18512466 - 18512515
Alignment:
Q  185 gtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccatt 234  Q
    |||||| ||||||||||||||||||||||| ||||||| || ||||||||    
T  18512466 gtgcaccaaagctcccgcatacgcagggtccgggaaggggtcccaccatt 18512515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 184 - 305
Target Start/End: Complemental strand, 21566559 - 21566439
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctat 283  Q
    |||||||||||||||||||||| |||||||  ||||||| || | |||| |||| |||| || |||| |||||| |   |||||||||| |||||||  |    
T  21566559 ggtgcactaaagctcccgcatatgcagggttcgggaaggggtcctacca-ttttggtgtattgtacgcagtcttcctctgttttttacacaagaggcggt 21566461  T
Q  284 ttccaaaacttaaacccgtgac 305  Q
    |||||| |||| |||| |||||    
T  21566460 ttccaagacttgaacctgtgac 21566439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 333
Target Start/End: Complemental strand, 19265859 - 19265791
Alignment:
Q  265 tttttacaaaagaggctatttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttacc 333  Q
    |||||||| ||| |||| | ||||| |||| |||||||||| |||||||||| |||| |||||||||||    
T  19265859 tttttacacaagcggctgtatccaagacttgaacccgtgacctttcagtcacgtgacaacaactttacc 19265791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 291 - 355
Target Start/End: Original strand, 28078248 - 28078312
Alignment:
Q  291 acttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccctc 355  Q
    |||| |||||||||| || |||||||||||| ||||||| || |||| ||||| |||||||||||    
T  28078248 acttgaacccgtgaccttacagtcacatgacaacaacttcacgagttgcgccagggttacccctc 28078312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 266 - 356
Target Start/End: Original strand, 2663025 - 2663113
Alignment:
Q  266 ttttacaaaagaggctatttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccctcg 356  Q
    ||||||| |||||||| ||||||  |||| ||||  ||||  | ||||||||| || |||||||||| |||| ||||||||||||||||||    
T  2663025 ttttacacaagaggctgtttccaggacttgaacctatgac--tccagtcacataacaacaactttactagttgcgccaaggttacccctcg 2663113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 187 - 242
Target Start/End: Original strand, 3469190 - 3469245
Alignment:
Q  187 gcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgt 242  Q
    |||||||||||||||||||| |||||||| |||||| || || |||||||| ||||    
T  3469190 gcactaaagctcccgcatacacagggtctaggaaggggtcccgccatttttggtgt 3469245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 291 - 354
Target Start/End: Original strand, 8149063 - 8149126
Alignment:
Q  291 acttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccct 354  Q
    |||| ||| |||||| || |||||||||||| ||||| |||||||||  |||||||||||||||    
T  8149063 acttgaactcgtgactttgcagtcacatgacaacaacattaccagttgtgccaaggttacccct 8149126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 192 - 235
Target Start/End: Original strand, 27889336 - 27889379
Alignment:
Q  192 aaagctcccgcatacgcagggtctgggaaggagttccaccattt 235  Q
    ||||||||||||||||||||||| ||||||| || |||||||||    
T  27889336 aaagctcccgcatacgcagggtccgggaaggggtcccaccattt 27889379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 301 - 352
Target Start/End: Original strand, 29140487 - 29140538
Alignment:
Q  301 gtgacatttcagtcacatgaccacaactttaccagttacgccaaggttaccc 352  Q
    ||||| ||||||| ||||||| ||||||||||||||| ||||||| ||||||    
T  29140487 gtgacctttcagttacatgacaacaactttaccagttgcgccaagattaccc 29140538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 184 - 214
Target Start/End: Complemental strand, 25434143 - 25434113
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtc 214  Q
    |||||||||||||||||||||||||||||||    
T  25434143 ggtgcactaaagctcccgcatacgcagggtc 25434113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 291 - 360
Target Start/End: Complemental strand, 12473322 - 12473253
Alignment:
Q  291 acttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccctcgttta 360  Q
    |||| ||||| |||| ||||||  ||||||| ||||||||||| ||| |||||||| |||||||| ||||    
T  12473322 acttgaacccatgacctttcagatacatgacaacaactttaccggttgcgccaaggctacccctcattta 12473253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 265 - 334
Target Start/End: Complemental strand, 22065632 - 22065563
Alignment:
Q  265 tttttacaaaagaggctatttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttacca 334  Q
    |||||||| |||||| | |||||||||||| ||| | |||| ||||| |||| |||| ||||||||||||    
T  22065632 tttttacacaagaggttgtttccaaaacttgaactcatgacttttcaatcacgtgacaacaactttacca 22065563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 288
Target Start/End: Complemental strand, 23231680 - 23231578
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctat 283  Q
    |||||||||||||| |||||||||||||||  ||||||| || ||| ||  ||  |||| ||||||| || |||||||  | ||||||| |||||||| |    
T  23231680 ggtgcactaaagctgccgcatacgcagggttcgggaaggggtcccatca--ttcggtgtattatacgcagccttaccttatattttacacaagaggctct 23231583  T
Q  284 ttcca 288  Q
    |||||    
T  23231582 ttcca 23231578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 184 - 240
Target Start/End: Original strand, 31591121 - 31591177
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgt 240  Q
    ||||||||| |||||||||||| ||| |||| ||||||| || ||||||||| ||||    
T  31591121 ggtgcactagagctcccgcatatgcaaggtccgggaaggggtcccaccatttattgt 31591177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 265 - 333
Target Start/End: Original strand, 44123712 - 44123780
Alignment:
Q  265 tttttacaaaagaggctatttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttacc 333  Q
    |||||||| |||||||| ||||||  |||| ||||||| |  |||||||||||||||  ||||||||||    
T  44123712 tttttacacaagaggctgtttccagtacttgaacccgtaatctttcagtcacatgacaccaactttacc 44123780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 83; Significance: 3e-39; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 184 - 345
Target Start/End: Original strand, 12221926 - 12222088
Alignment:
Q  184 ggtgcactaaa-gctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggcta 282  Q
    ||||||||||| |||||||||||||||||||| ||||||| || |||||||| || |||| || |||| || ||||||  |||||||||| ||||||||     
T  12221926 ggtgcactaaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaagaggctg 12222025  T
Q  283 tttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaag 345  Q
    ||||||| |||| |||||||||| ||||||||||||||| ||||||||||||||| |||||||    
T  12222026 tttccaagacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaag 12222088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 184 - 355
Target Start/End: Original strand, 29355867 - 29356039
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctat 283  Q
    ||||||||||||||||||||||||||||||| ||||||| || |||||||| || |||| || |||| || ||||||  |||| ||||| |||||||| |    
T  29355867 ggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtttcttacacaagaggctgt 29355966  T
Q  284 ttccaaaacttaaacccgtgacatttcagtcacatgaccacaa-ctttaccagttacgccaaggttacccctc 355  Q
    |||||  |||| |||||||||| ||||||||||||||| ||||  ||||||||||  ||||||||||||||||    
T  29355967 ttccaggacttgaacccgtgacctttcagtcacatgacaacaatttttaccagttgtgccaaggttacccctc 29356039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 184 - 357
Target Start/End: Original strand, 1354769 - 1354938
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctat 283  Q
    ||||||||| |||||||||||| |||||||| ||||||| || |||||||||   |||| || |||| || ||||||  |||||  ||| |||||||| |    
T  1354769 ggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttg--gtgtattgtacgcagccttaccctgtttt--acacaagaggctgt 1354864  T
Q  284 ttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccctcgt 357  Q
    |||||  |||| |||| ||||| ||||||||||||||| ||||||||||||||| |||||||||||||||||||    
T  1354865 ttccaggacttgaaccagtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacccctcgt 1354938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 184 - 355
Target Start/End: Complemental strand, 1347085 - 1346918
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctat 283  Q
    ||||||||| |||||||||||| |||||||| ||||||| || |||||||||   |||| || |||| || ||||||  |||||  ||| ||| |||| |    
T  1347085 ggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttg--gtgtattgtacgcagccttaccctgtttt--acacaagtggctgt 1346990  T
Q  284 ttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccctc 355  Q
    |||||  |||| |||||||||| ||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  1346989 ttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacccctc 1346918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 184 - 353
Target Start/End: Original strand, 3815089 - 3815256
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctat 283  Q
    |||||||||||||| ||||||||| |||||  ||||| | || |||||||||   |||| || |||| |||| ||||   ||||||||| || || || |    
T  3815089 ggtgcactaaagcttccgcatacgtagggttcgggaaagggtcccaccatttg--gtgtattgtacgcagtcgtaccatattttttacacaatagtctgt 3815186  T
Q  284 ttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccc 353  Q
    |||||  |||| |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||    
T  3815187 ttccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgccaaggttacccc 3815256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 183 - 355
Target Start/End: Complemental strand, 9161248 - 9161077
Alignment:
Q  183 tggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggcta 282  Q
    ||||||||||||||| |||||||||||||||| | ||||| || |||||||| ||  ||| || |||| || |||| ||   |||||||| ||||||||     
T  9161248 tggtgcactaaagcttccgcatacgcagggtccgagaaggggtcccaccattattgatgtattgtacgcagcctta-ctctgtttttacacaagaggctg 9161150  T
Q  283 tttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccctc 355  Q
    ||||||  |||| |||| ||||| ||||||||||||||| |||||||||||  || || ||||||||||||||    
T  9161149 tttccaggacttgaacctgtgacctttcagtcacatgacaacaactttaccgattgcgtcaaggttacccctc 9161077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 263 - 355
Target Start/End: Complemental strand, 8409289 - 8409197
Alignment:
Q  263 gttttttacaaaagaggctatttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccctc 355  Q
    |||||||||| |||||||  ||||||  |||| || ||||||| |||||||||||| || ||||||||||||||| |||||||||||||||||    
T  8409289 gttttttacacaagaggcagtttccaggacttgaatccgtgacctttcagtcacattacaacaactttaccagttgcgccaaggttacccctc 8409197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 194 - 337
Target Start/End: Complemental strand, 14553626 - 14553484
Alignment:
Q  194 agctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctatttccaaaact 293  Q
    ||||||||||||| ||||||||  ||||| || |||||| |||| |||| ||||||  || ||||||   ||||||||| |||| ||||||||||  |||    
T  14553626 agctcccgcatacacagggtctacgaaggggtcccaccagttttggtgtattatacacagccttaccctattttttacacaagaagctatttccaggact 14553527  T
Q  294 taaacccgtgacatttcagtcacatgaccacaactttaccagtt 337  Q
    | |||| ||||| ||| ||||||||||| |||||||||||||||    
T  14553526 tgaacctgtgaccttt-agtcacatgacaacaactttaccagtt 14553484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 184 - 242
Target Start/End: Complemental strand, 12886036 - 12885978
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgt 242  Q
    ||||||||||||||||| ||||||||||||||||||||| || ||||||||||||||||    
T  12886036 ggtgcactaaagctcccacatacgcagggtctgggaaggggtcccaccattttttgtgt 12885978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 183 - 352
Target Start/End: Original strand, 32728168 - 32728334
Alignment:
Q  183 tggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggcta 282  Q
    ||||||||||||| ||||||||||| |||||||||||| | |  |||| ||||   || | || |||  |||||||||  |||||||||| |||||| |     
T  32728168 tggtgcactaaagttcccgcatacgtagggtctgggaaaggga-ccactatttg--gtatattgtacacagtcttaccctgttttttacataagaggttg 32728264  T
Q  283 tttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttaccc 352  Q
    |||||||||||| || | ||||| ||||||||||||||| ||||||||||  ||| | ||||||||||||    
T  32728265 tttccaaaacttgaatctgtgacctttcagtcacatgacaacaactttactcgttccaccaaggttaccc 32728334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 263 - 355
Target Start/End: Original strand, 14975169 - 14975261
Alignment:
Q  263 gttttttacaaaagaggctatttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccctc 355  Q
    |||||||||| |||||||| ||||||  |||| || ||||||| || |||||||||||| ||||||||||| ||| ||||||||||| |||||    
T  14975169 gttttttacacaagaggctgtttccaggacttgaatccgtgaccttccagtcacatgacaacaactttaccggttgcgccaaggttatccctc 14975261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 247 - 351
Target Start/End: Complemental strand, 20400729 - 20400625
Alignment:
Q  247 tacgtagtcttacctagttttttacaaaagaggctatttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaagg 346  Q
    |||| |||||||||  |||||||||| |||||  | |||||| ||||| |||| ||||| ||||||||||||||| |||||| ||||| || ||||||||    
T  20400729 tacgcagtcttaccctgttttttacacaagagattgtttccataacttgaacctgtgacctttcagtcacatgacaacaactataccaattgcgccaagg 20400630  T
Q  347 ttacc 351  Q
    |||||    
T  20400629 ttacc 20400625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 184 - 350
Target Start/End: Original strand, 2166422 - 2166587
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctat 283  Q
    |||||||||||||||||| |||   |||||| ||||||| || |||||||| || |||| || |||| |  |||| |  || ||||||| |||||| | |    
T  2166422 ggtgcactaaagctcccgaatatatagggtccgggaaggggtcccaccattattggtgtattgtacgcaaccttatcctgtattttacacaagaggttgt 2166521  T
Q  284 ttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttac 350  Q
    |||||  |||| |||||||||| |||||||||||| || |||||||||| |||| || |||||||||    
T  2166522 ttccaggacttgaacccgtgacctttcagtcacataacaacaactttactagttgcg-caaggttac 2166587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 184 - 350
Target Start/End: Original strand, 2178055 - 2178220
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctat 283  Q
    |||||||||||||||||| |||   |||||| ||||||| || |||||||| || |||| || |||| |  |||| |  || ||||||| |||||| | |    
T  2178055 ggtgcactaaagctcccgaatatatagggtccgggaaggggtcccaccattattggtgtattgtacgcaaccttatcctgtattttacacaagaggttgt 2178154  T
Q  284 ttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttac 350  Q
    |||||  |||| |||||||||| |||||||||||| || |||||||||| |||| || |||||||||    
T  2178155 ttccaggacttgaacccgtgacctttcagtcacataacaacaactttactagttgcg-caaggttac 2178220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 185 - 355
Target Start/End: Original strand, 15866052 - 15866218
Alignment:
Q  185 gtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctatt 284  Q
    |||||||| || ||||||| |||||||||| ||||||| || |||||||||  ||| |    |||| ||  |||||  |||||||||  |||||||| ||    
T  15866052 gtgcactatagatcccgcaaacgcagggtccgggaaggggtcccaccatttggtgtat----tacgcagctttaccctgttttttacttaagaggctgtt 15866147  T
Q  285 tccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccctc 355  Q
    ||||  | || ||||| |||| ||||| ||||||| | |||||||||||||||  ||||||||||||||||    
T  15866148 tccaggaattgaacccatgacctttcaatcacatgccaacaactttaccagttgggccaaggttacccctc 15866218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 264 - 352
Target Start/End: Complemental strand, 12063512 - 12063424
Alignment:
Q  264 ttttttacaaaagaggctatttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttaccc 352  Q
    ||||||| | ||||||||||||| |  |||| |||||||||| |||||||| |||||  ||||||||| ||||| | ||||||||||||    
T  12063512 ttttttatacaagaggctatttctaggacttgaacccgtgacctttcagtctcatgataacaactttatcagttgcaccaaggttaccc 12063424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 291 - 355
Target Start/End: Original strand, 33922945 - 33923009
Alignment:
Q  291 acttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccctc 355  Q
    |||| |||| ||||| ||||||||| ||||| ||||||||||| ||| |||||||||||||||||    
T  33922945 acttgaacctgtgacttttcagtcaaatgacaacaactttaccggttgcgccaaggttacccctc 33923009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 263 - 357
Target Start/End: Complemental strand, 1941901 - 1941807
Alignment:
Q  263 gttttttacaaaagaggctatttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccctcgt 357  Q
    |||||||||| |||||| | ||| ||  |||| || ||| ||| || |||||| ||||| ||||||||||||||| | |||||||||||||||||    
T  1941901 gttttttacacaagaggttgtttacatgacttcaatccgcgaccttccagtcagatgacaacaactttaccagttgcaccaaggttacccctcgt 1941807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 234
Target Start/End: Complemental strand, 6808518 - 6808468
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccatt 234  Q
    ||||||||||||||||||||||| ||||||| ||||||| || ||||||||    
T  6808518 ggtgcactaaagctcccgcatacacagggtccgggaaggggtcccaccatt 6808468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 250
Target Start/End: Complemental strand, 12892132 - 12892066
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacg 250  Q
    |||||||||||||||||||||| || ||||| ||||||| || |||||||| || |||| |||||||    
T  12892132 ggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattatacg 12892066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 189 - 235
Target Start/End: Complemental strand, 32579543 - 32579497
Alignment:
Q  189 actaaagctcccgcatacgcagggtctgggaaggagttccaccattt 235  Q
    ||||||||||||||||| |||||||||||||||| || |||||||||    
T  32579543 actaaagctcccgcatatgcagggtctgggaaggggtcccaccattt 32579497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 210 - 355
Target Start/End: Complemental strand, 6024332 - 6024187
Alignment:
Q  210 gggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctatttccaaaacttaaacccgtgacattt 309  Q
    ||||| ||||||  || ||| |||| || |||| || |||| |||||||||  |||||||||| |||||||| |||| |  | || || ||||||| ||     
T  6024332 gggtccgggaagaggtcccatcattattggtgtattgtacgcagtcttaccatgttttttacacaagaggctgtttctaggatttgaaaccgtgaccttc 6024233  T
Q  310 cagtcacatgaccacaactttaccagttacgccaaggttacccctc 355  Q
    || ||||||||| ||||||||||||||| || |||  |||||||||    
T  6024232 caatcacatgacaacaactttaccagttgcgtcaaaattacccctc 6024187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 300 - 337
Target Start/End: Complemental strand, 8417481 - 8417444
Alignment:
Q  300 cgtgacatttcagtcacatgaccacaactttaccagtt 337  Q
    |||||||||||||||||||||| |||||||||||||||    
T  8417481 cgtgacatttcagtcacatgacaacaactttaccagtt 8417444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 302 - 351
Target Start/End: Complemental strand, 24734640 - 24734591
Alignment:
Q  302 tgacatttcagtcacatgaccacaactttaccagttacgccaaggttacc 351  Q
    |||| ||||||||||||||| ||||||||||||||| |||||| ||||||    
T  24734640 tgacctttcagtcacatgacaacaactttaccagttgcgccaatgttacc 24734591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 298 - 354
Target Start/End: Original strand, 13905103 - 13905158
Alignment:
Q  298 cccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccct 354  Q
    |||||||| ||||||||||||||| ||||||||||| ||| |||||||||| |||||    
T  13905103 cccgtgacctttcagtcacatgacaacaactttacc-gttgcgccaaggttccccct 13905158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 184 - 235
Target Start/End: Complemental strand, 13267848 - 13267797
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattt 235  Q
    |||||||| ||||||||||||||||||||||  |||||| || |||||||||    
T  13267848 ggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 13267797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 278 - 345
Target Start/End: Original strand, 19649271 - 19649338
Alignment:
Q  278 ggctatttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaag 345  Q
    |||||||| || || ||||| ||||||  ||||||||||||||| ||||||||| ||||| |||||||    
T  19649271 ggctattttcagaatttaaatccgtgatctttcagtcacatgacaacaactttatcagttgcgccaag 19649338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 188 - 235
Target Start/End: Complemental strand, 24097696 - 24097649
Alignment:
Q  188 cactaaagctcccgcatacgcagggtctgggaaggagttccaccattt 235  Q
    |||||||||| |||||||||||||||| ||||||| || |||||||||    
T  24097696 cactaaagcttccgcatacgcagggtccgggaaggggtcccaccattt 24097649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 191 - 222
Target Start/End: Original strand, 29016301 - 29016332
Alignment:
Q  191 taaagctcccgcatacgcagggtctgggaagg 222  Q
    ||||||||||||||||||||||||||||||||    
T  29016301 taaagctcccgcatacgcagggtctgggaagg 29016332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 184 - 242
Target Start/End: Original strand, 3116141 - 3116199
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgt 242  Q
    |||| ||||||||||||||||||||| |||| | ||||| || ||||||||||| ||||    
T  3116141 ggtgtactaaagctcccgcatacgcaaggtccgagaaggggtcccaccatttttggtgt 3116199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 184 - 222
Target Start/End: Original strand, 10734917 - 10734955
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaagg 222  Q
    |||| |||||||||||||||||||||||||| |||||||    
T  10734917 ggtggactaaagctcccgcatacgcagggtccgggaagg 10734955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 180 - 222
Target Start/End: Original strand, 20906794 - 20906836
Alignment:
Q  180 acttggtgcactaaagctcccgcatacgcagggtctgggaagg 222  Q
    ||||||| |||||||||||||||||| || |||||||||||||    
T  20906794 acttggttcactaaagctcccgcatatgcggggtctgggaagg 20906836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 291 - 337
Target Start/End: Original strand, 27855555 - 27855601
Alignment:
Q  291 acttaaacccgtgacatttcagtcacatgaccacaactttaccagtt 337  Q
    |||||||| || ||||||||||||||||||| | |||||||||||||    
T  27855555 acttaaactcgcgacatttcagtcacatgacaaaaactttaccagtt 27855601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 233
Target Start/End: Original strand, 23930139 - 23930188
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccat 233  Q
    |||||||||||||||||||||| |||||||| | ||||| || |||||||    
T  23930139 ggtgcactaaagctcccgcataagcagggtccgtgaaggggtcccaccat 23930188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 184 - 232
Target Start/End: Complemental strand, 11395884 - 11395836
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccacca 232  Q
    |||| ||||||||||||||||||||||| || ||||||| || ||||||    
T  11395884 ggtggactaaagctcccgcatacgcaggatccgggaaggggtcccacca 11395836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 184 - 228
Target Start/End: Complemental strand, 25557846 - 25557802
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttcc 228  Q
    ||||||||| |||||||||||| |||||||| ||||||| |||||    
T  25557846 ggtgcactagagctcccgcatatgcagggtccgggaaggggttcc 25557802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 81; Significance: 5e-38; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 186 - 350
Target Start/End: Complemental strand, 59100 - 58936
Alignment:
Q  186 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctattt 285  Q
    ||||||||||||||||||||||||| ||||||||||| || ||||||||||| |||| || |||| |||||||||  |||||||| | |||||||| |||    
T  59100 tgcactaaagctcccgcatacgcagagtctgggaaggggtcccaccatttttggtgtattgtacgcagtcttaccctgttttttatacaagaggctgttt 59001  T
Q  286 ccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttac 350  Q
    |||  |||| |||||||||| ||||||||||||||| | || |||||||||| | ||||||||||    
T  59000 ccaggacttgaacccgtgacctttcagtcacatgacaataagtttaccagttgctccaaggttac 58936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 184 - 353
Target Start/End: Original strand, 13036 - 13202
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctat 283  Q
    ||||||||||||| ||||||||||||||||||||||||| || ||||||||    |||| || |||| || ||||||| |||||| ||  |||||||| |    
T  13036 ggtgcactaaagcccccgcatacgcagggtctgggaaggggtcccaccattcg--gtgtattgtacgcagccttaccttgttttt-acgcaagaggctgt 13132  T
Q  284 ttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccc 353  Q
    |||||  |||| |||| ||||| ||||||||||||||| ||||||||||| ||| |||||||||||||||    
T  13133 ttccaggacttgaaccggtgacctttcagtcacatgacaacaactttaccggttgcgccaaggttacccc 13202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 67; Significance: 1e-29; HSPs: 3)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 186 - 355
Target Start/End: Original strand, 24786 - 24948
Alignment:
Q  186 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctattt 285  Q
    ||||||||||||||||||||||||||||  ||||||| || |||||||||   ||||||| |||| || ||||||  |||||||||| |||||||| ||     
T  24786 tgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccatttg--gtgtgttgtacgcagccttaccctgttttttacacaagaggctgttg 24883  T
Q  286 ccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccctc 355  Q
         |||| ||||| |||| ||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  24884 -----acttgaacccatgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacccctc 24948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 184 - 346
Target Start/End: Complemental strand, 46954 - 46794
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctat 283  Q
    ||||||||||||||||||||||||||||||| ||||||| || ||||||  ||| |||| || |||| |  ||||||   ||||||||| |||||| | |    
T  46954 ggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccacca--tttggtgtattgtacgcaaccttaccctattttttacacaagaggttgt 46857  T
Q  284 ttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaagg 346  Q
    |||||  |||| |||||||||| ||  ||||||||||| |||||||||||| || ||||||||    
T  46856 ttccagcacttgaacccgtgaccttctagtcacatgacaacaactttaccaattgcgccaagg 46794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 186 - 236
Target Start/End: Original strand, 46721 - 46771
Alignment:
Q  186 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccatttt 236  Q
    |||| |||||||||||||||||||||||||||||||| || ||||||||||    
T  46721 tgcattaaagctcccgcatacgcagggtctgggaaggggtcccaccatttt 46771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 184 - 355
Target Start/End: Complemental strand, 30700 - 30533
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctat 283  Q
    ||||||||| |||||||||||| |||||||| ||||||| || |||||||||   |||| || |||| || | ||||  |||||  ||| |||||||| |    
T  30700 ggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttg--gtgtattgtacgcagccctaccctgtttt--acacaagaggctgt 30605  T
Q  284 ttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccctc 355  Q
    |||||  |||| |||| ||||| ||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  30604 ttccaggacttgaaccggtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacccctc 30533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 185 - 346
Target Start/End: Complemental strand, 10932 - 10773
Alignment:
Q  185 gtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctatt 284  Q
    |||||||||||||||||||||||||||||| ||||||| || ||||||  ||| |||| ||  ||| || | ||||  |||||||||| |||||| | ||    
T  10932 gtgcactaaagctcccgcatacgcagggtccgggaaggggtcccacca--tttggtgtattggacgcagccctaccctgttttttacacaagaggttgtt 10835  T
Q  285 tccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaagg 346  Q
    | || | ||| |||||||||| || |||||||||||| ||||||||||||||| | ||||||    
T  10834 ttcagaccttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcaccaagg 10773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187 (Bit Score: 51; Significance: 4e-20; HSPs: 4)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 266 - 352
Target Start/End: Original strand, 10140 - 10226
Alignment:
Q  266 ttttacaaaagaggctatttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttaccc 352  Q
    ||||||| |||||||| ||||||  |||| |||||||||| ||||||||||||||| ||||||||||||||| || |||||||||||    
T  10140 ttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgtcaaggttaccc 10226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 266 - 352
Target Start/End: Original strand, 20468 - 20554
Alignment:
Q  266 ttttacaaaagaggctatttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttaccc 352  Q
    ||||||| |||||||| ||||||  |||| |||||||||| ||||||||||||||| ||||||||||||||| || |||||||||||    
T  20468 ttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgtcaaggttaccc 20554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 291 - 355
Target Start/End: Complemental strand, 8963 - 8899
Alignment:
Q  291 acttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccctc 355  Q
    |||| |||| ||||||||||||||||||||| ||||||| ||| ||| |||||||||||||||||    
T  8963 acttgaacctgtgacatttcagtcacatgacaacaacttcaccggttgcgccaaggttacccctc 8899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 291 - 355
Target Start/End: Complemental strand, 19291 - 19227
Alignment:
Q  291 acttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccctc 355  Q
    |||| |||| ||||||||||||||||||||| ||||||| ||| ||| |||||||||||||||||    
T  19291 acttgaacctgtgacatttcagtcacatgacaacaacttcaccggttgcgccaaggttacccctc 19227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 283 - 355
Target Start/End: Complemental strand, 83901 - 83829
Alignment:
Q  283 tttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccctc 355  Q
    ||||||| |||| |||||||||| ||||||||||||||| |||||||||| |||| |||||||||||||||||    
T  83901 tttccaagacttgaacccgtgacctttcagtcacatgacaacaactttactagttgcgccaaggttacccctc 83829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 183 - 348
Target Start/End: Complemental strand, 11253 - 11093
Alignment:
Q  183 tggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggcta 282  Q
    |||||||||| |||||||||||| |||||||| ||||||| || |||||||||   |||| || || | || ||||| | |||||  ||| ||||||||     
T  11253 tggtgcactagagctcccgcatatgcagggtccgggaaggtgtcccaccatttg--gtgtattgtaagcagccttactttgtttt--acacaagaggctg 11158  T
Q  283 tttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggtt 348  Q
    ||||||  |||| |||||||||| |||||||||||| |  ||||||||||||||| ||||||||||    
T  11157 tttccaggacttgaacccgtgacctttcagtcacat-agaacaactttaccagttgcgccaaggtt 11093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 264 - 351
Target Start/End: Original strand, 226496 - 226583
Alignment:
Q  264 ttttttacaaaagaggctatttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacc 351  Q
    ||||||| | |||||||| |||| |  |||| || ||||||| ||||||||||||||| ||||||||||||||| |||||||||||||    
T  226496 ttttttagacaagaggctgtttctaggacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacc 226583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1176 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold1176
Description:

Target: scaffold1176; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 183 - 347
Target Start/End: Original strand, 1598 - 1758
Alignment:
Q  183 tggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggcta 282  Q
    |||||||||||||||||||||||||| ||||| ||||||| || ||| ||  ||| |||| || || | || ||||  |  | ||||||| |||||| |     
T  1598 tggtgcactaaagctcccgcatacgccgggtccgggaaggggtcccatca--tttggtgtattgtatgcagcctta--tcctgttttacacaagaggttg 1693  T
Q  283 tttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggt 347  Q
    ||| ||  |||| ||||| |||| ||||||||||||||| |||||||||||| || || ||||||    
T  1694 ttttcaggacttgaacccatgacctttcagtcacatgacaacaactttaccaattgcgtcaaggt 1758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 266 - 350
Target Start/End: Complemental strand, 4200 - 4117
Alignment:
Q  266 ttttacaaaagaggctatttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttac 350  Q
    ||||||| |||||| | ||||||  |||| |||||||||| |||||||||||| || |||||||||| |||| || |||||||||    
T  4200 ttttacacaagaggttgtttccaggacttgaacccgtgacctttcagtcacataacaacaactttactagttgcg-caaggttac 4117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 235
Target Start/End: Original strand, 72878 - 72930
Alignment:
Q  183 tggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattt 235  Q
    ||||||||||||||||||||||||||||| || ||||||| || | |||||||    
T  72878 tggtgcactaaagctcccgcatacgcaggttccgggaaggggtactaccattt 72930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 184 - 235
Target Start/End: Original strand, 24145 - 24196
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattt 235  Q
    ||||||||| |||||||||||| |||||||| ||||||| || |||||||||    
T  24145 ggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccattt 24196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 184 - 235
Target Start/End: Original strand, 48646 - 48697
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattt 235  Q
    ||||||||| |||||||||||| |||||||| ||||||| || |||||||||    
T  48646 ggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccattt 48697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0954 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0954
Description:

Target: scaffold0954; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 288
Target Start/End: Complemental strand, 3667 - 3565
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagaggctat 283  Q
    |||||||||||||| |||||||||||||||  ||||||| || ||| ||  ||  |||| ||||||| || |||||||  | ||||||| |||||||| |    
T  3667 ggtgcactaaagctgccgcatacgcagggttcgggaaggggtcccatca--ttcggtgtattatacgcagccttaccttatattttacacaagaggctct 3570  T
Q  284 ttcca 288  Q
    |||||    
T  3569 ttcca 3565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 260
Target Start/End: Complemental strand, 24771 - 24697
Alignment:
Q  184 ggtgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacc 260  Q
    |||||||| ||||||||| ||||||||||||||| |||| | |||||  | ||| |||| ||||||| |||||||||    
T  24771 ggtgcactgaagctcccgtatacgcagggtctggaaagggggtccac--tatttggtgtattatacgcagtcttacc 24697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 278 - 354
Target Start/End: Complemental strand, 24695 - 24619
Alignment:
Q  278 ggctatttccaaaacttaaacccgtgacatttcagtcacatgaccacaactttaccagttacgccaaggttacccct 354  Q
    |||| ||||||  |||| |||||||||| || ||||||| |||| ||||||||| || ||  |||||||||||||||    
T  24695 ggctgtttccaggacttgaacccgtgaccttacagtcacttgacaacaactttatcaattgtgccaaggttacccct 24619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University