View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8448_low_33 (Length: 229)
Name: NF8448_low_33
Description: NF8448
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8448_low_33 |
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Alignment Details
Target: chr2 (Bit Score: 194; Significance: 1e-105; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 24556895 - 24556682
Alignment:
| Q |
1 |
gtttgaatccagtgatggaagctattacatgagctctggatagagatgtgcccccaatgtaaaatttactttttgaagcatttatcaattgcctagaata |
100 |
Q |
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| T |
24556895 |
gtttgaatctagtgatggaagctattacatgagctctggatagagatgtgcccccaatgtaaaatttactttttgaagaatttatcaattgcctagaata |
24556796 |
T |
|
| Q |
101 |
ctgaccataaagatgaaagagctgcttgatatgccatatgttacttagagttcctttgcaacaaacaagtatgtcatctgcatagagacaatgactggga |
200 |
Q |
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||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| |
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| T |
24556795 |
ctgaccataaagaggaaagagctgcttgatatgccatatgttacttagagttcctttgcaaaaaacaagtatgtcatctgcgtagagacaatgactggga |
24556696 |
T |
|
| Q |
201 |
atgaagagagattt |
214 |
Q |
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|||||||||||||| |
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| T |
24556695 |
atgaagagagattt |
24556682 |
T |
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