View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8449_low_21 (Length: 261)

Name: NF8449_low_21
Description: NF8449
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8449_low_21
NF8449_low_21
[»] chr4 (29 HSPs)
chr4 (1-261)||(15534862-15535122)
chr4 (1-261)||(36038551-36038811)
chr4 (8-261)||(49547003-49547255)
chr4 (28-261)||(33849483-33849716)
chr4 (70-261)||(28385984-28386175)
chr4 (28-177)||(16277366-16277515)
chr4 (28-177)||(53386976-53387125)
chr4 (141-261)||(9638748-9638868)
chr4 (121-261)||(15008707-15008847)
chr4 (102-261)||(10694399-10694558)
chr4 (73-160)||(15344776-15344863)
chr4 (122-261)||(40620271-40620410)
chr4 (102-261)||(10908165-10908324)
chr4 (70-177)||(18230565-18230672)
chr4 (73-160)||(12611752-12611839)
chr4 (73-158)||(15447501-15447586)
chr4 (73-158)||(23802528-23802613)
chr4 (1-85)||(32490662-32490744)
chr4 (112-176)||(14549474-14549538)
chr4 (112-176)||(35660712-35660776)
chr4 (73-160)||(51463152-51463239)
chr4 (1-103)||(15415930-15416031)
chr4 (112-176)||(19434823-19434887)
chr4 (73-130)||(13043893-13043950)
chr4 (112-197)||(16296674-16296759)
chr4 (1-103)||(16370771-16370872)
chr4 (1-50)||(15318871-15318921)
chr4 (113-157)||(9622330-9622374)
chr4 (70-118)||(45005828-45005876)
[»] chr2 (19 HSPs)
chr2 (1-261)||(10683984-10684244)
chr2 (1-261)||(20261900-20262160)
chr2 (28-261)||(23338478-23338711)
chr2 (1-261)||(13100786-13101046)
chr2 (32-176)||(20590365-20590509)
chr2 (70-261)||(31345860-31346051)
chr2 (102-261)||(25183928-25184087)
chr2 (102-261)||(18358121-18358280)
chr2 (70-197)||(21072809-21072936)
chr2 (102-261)||(21081123-21081282)
chr2 (102-261)||(21915363-21915522)
chr2 (70-176)||(41301050-41301156)
chr2 (73-160)||(43707171-43707258)
chr2 (73-160)||(7187267-7187354)
chr2 (112-176)||(149670-149734)
chr2 (73-160)||(22173101-22173188)
chr2 (1-52)||(25652174-25652225)
chr2 (103-160)||(12626587-12626644)
chr2 (120-197)||(28345208-28345284)
[»] chr5 (22 HSPs)
chr5 (1-261)||(37804124-37804384)
chr5 (1-261)||(9776846-9777106)
chr5 (1-261)||(41875644-41875904)
chr5 (70-261)||(27868695-27868886)
chr5 (70-261)||(33472684-33472875)
chr5 (102-261)||(17011467-17011626)
chr5 (102-261)||(29448579-29448738)
chr5 (70-176)||(18419277-18419383)
chr5 (102-214)||(265824-265936)
chr5 (104-176)||(24594218-24594290)
chr5 (104-174)||(24668312-24668382)
chr5 (104-174)||(24738081-24738151)
chr5 (104-174)||(24750850-24750920)
chr5 (110-197)||(21503943-21504029)
chr5 (1-94)||(7786090-7786181)
chr5 (110-187)||(21398960-21399037)
chr5 (1-52)||(26707324-26707375)
chr5 (1-52)||(26977058-26977109)
chr5 (110-214)||(20313061-20313165)
chr5 (73-158)||(22412930-22413015)
chr5 (70-103)||(21553508-21553541)
chr5 (120-172)||(36508915-36508967)
[»] chr3 (35 HSPs)
chr3 (1-261)||(12305803-12306063)
chr3 (8-261)||(54521503-54521756)
chr3 (1-235)||(29544085-29544319)
chr3 (1-235)||(3803580-3803814)
chr3 (70-261)||(13436979-13437170)
chr3 (1-176)||(55291653-55291828)
chr3 (70-261)||(42268-42459)
chr3 (70-261)||(16324661-16324852)
chr3 (1-164)||(46722638-46722801)
chr3 (28-176)||(10555132-10555280)
chr3 (70-260)||(5224065-5224254)
chr3 (70-261)||(26054555-26054746)
chr3 (141-261)||(14641742-14641862)
chr3 (70-261)||(15465835-15466026)
chr3 (102-261)||(16979651-16979810)
chr3 (102-261)||(22652512-22652671)
chr3 (70-176)||(43549776-43549882)
chr3 (94-190)||(18890235-18890331)
chr3 (94-202)||(18893482-18893590)
chr3 (73-173)||(43929219-43929319)
chr3 (73-160)||(6820011-6820098)
chr3 (70-160)||(10833426-10833516)
chr3 (124-214)||(29907422-29907512)
chr3 (124-214)||(29948588-29948678)
chr3 (124-214)||(29997742-29997832)
chr3 (73-158)||(16643926-16644011)
chr3 (110-199)||(48043640-48043729)
chr3 (102-214)||(45803491-45803602)
chr3 (73-158)||(50243656-50243741)
chr3 (74-158)||(24152509-24152593)
chr3 (119-214)||(3527327-3527421)
chr3 (1-85)||(15238978-15239060)
chr3 (123-200)||(25201936-25202013)
chr3 (110-187)||(50350979-50351056)
chr3 (112-160)||(6805091-6805139)
[»] chr7 (40 HSPs)
chr7 (1-261)||(29797291-29797552)
chr7 (1-261)||(29801110-29801371)
chr7 (1-261)||(23664174-23664434)
chr7 (1-261)||(11303928-11304188)
chr7 (70-261)||(16107979-16108170)
chr7 (1-176)||(14105479-14105654)
chr7 (1-176)||(14415496-14415671)
chr7 (70-261)||(11661846-11662037)
chr7 (28-177)||(17505043-17505192)
chr7 (28-177)||(17548022-17548171)
chr7 (70-258)||(14188414-14188602)
chr7 (70-261)||(13917693-13917884)
chr7 (70-261)||(1856521-1856712)
chr7 (70-261)||(25926420-25926611)
chr7 (141-255)||(17070483-17070597)
chr7 (77-176)||(4325921-4326020)
chr7 (102-261)||(16550156-16550315)
chr7 (102-261)||(16615347-16615506)
chr7 (73-160)||(13864486-13864573)
chr7 (73-176)||(39431311-39431414)
chr7 (73-176)||(44190340-44190443)
chr7 (60-177)||(13256517-13256634)
chr7 (70-176)||(13648107-13648213)
chr7 (102-257)||(32160354-32160509)
chr7 (73-160)||(16462910-16462997)
chr7 (114-176)||(19195016-19195078)
chr7 (73-130)||(23557404-23557461)
chr7 (112-176)||(12754829-12754893)
chr7 (1-52)||(12207741-12207792)
chr7 (112-214)||(13315245-13315347)
chr7 (73-130)||(18455712-18455769)
chr7 (1-52)||(12201136-12201187)
chr7 (119-214)||(18570432-18570526)
chr7 (102-235)||(29052336-29052462)
chr7 (73-130)||(23556215-23556272)
chr7 (114-198)||(8930933-8931017)
chr7 (119-198)||(36300812-36300890)
chr7 (114-176)||(37539272-37539334)
chr7 (112-198)||(38295405-38295490)
chr7 (112-176)||(47975055-47975119)
[»] chr6 (23 HSPs)
chr6 (1-261)||(28288559-28288818)
chr6 (1-261)||(12942870-12943130)
chr6 (70-261)||(23956603-23956794)
chr6 (70-259)||(13765089-13765278)
chr6 (70-235)||(31021842-31022004)
chr6 (141-261)||(19825680-19825800)
chr6 (102-261)||(15891723-15891882)
chr6 (102-261)||(15900808-15900967)
chr6 (70-261)||(23415645-23415836)
chr6 (70-261)||(27557403-27557594)
chr6 (155-261)||(25807873-25807979)
chr6 (102-261)||(15173607-15173766)
chr6 (70-158)||(23225978-23226066)
chr6 (73-160)||(611641-611728)
chr6 (73-160)||(20556156-20556243)
chr6 (75-158)||(25619023-25619106)
chr6 (73-135)||(14978665-14978727)
chr6 (113-198)||(10446015-10446099)
chr6 (110-214)||(29045050-29045154)
chr6 (1-103)||(9185048-9185150)
chr6 (113-187)||(1818766-1818839)
chr6 (2-52)||(18138497-18138546)
chr6 (114-176)||(35057368-35057430)
[»] chr1 (21 HSPs)
chr1 (28-261)||(297096-297329)
chr1 (70-261)||(28313089-28313280)
chr1 (102-261)||(29763786-29763945)
chr1 (141-261)||(8276183-8276303)
chr1 (102-261)||(50001215-50001374)
chr1 (70-176)||(22130146-22130252)
chr1 (141-220)||(38056866-38056944)
chr1 (102-235)||(46197899-46198032)
chr1 (70-160)||(45574140-45574230)
chr1 (73-158)||(13880660-13880745)
chr1 (104-176)||(23194667-23194739)
chr1 (112-197)||(8306407-8306492)
chr1 (112-219)||(17901966-17902074)
chr1 (112-176)||(24723624-24723688)
chr1 (119-214)||(34392552-34392646)
chr1 (112-176)||(7052177-7052241)
chr1 (1-52)||(21526832-21526884)
chr1 (112-177)||(21239207-21239272)
chr1 (112-176)||(6833990-6834054)
chr1 (110-170)||(21188195-21188255)
chr1 (8-52)||(24476279-24476323)
[»] scaffold0422 (1 HSPs)
scaffold0422 (70-261)||(3704-3895)
[»] scaffold0453 (1 HSPs)
scaffold0453 (70-261)||(7131-7322)
[»] chr8 (22 HSPs)
chr8 (70-261)||(8413869-8414060)
chr8 (70-261)||(11775463-11775645)
chr8 (70-243)||(19882706-19882879)
chr8 (70-261)||(14397031-14397221)
chr8 (155-261)||(17795973-17796079)
chr8 (102-261)||(16198575-16198734)
chr8 (102-261)||(25657668-25657827)
chr8 (102-261)||(23478821-23478980)
chr8 (102-261)||(19880569-19880721)
chr8 (70-160)||(25483562-25483652)
chr8 (73-158)||(23661140-23661225)
chr8 (73-157)||(20455831-20455915)
chr8 (121-261)||(26454452-26454585)
chr8 (73-158)||(17460331-17460416)
chr8 (73-154)||(20463042-20463123)
chr8 (113-214)||(22610431-22610531)
chr8 (78-157)||(20460809-20460888)
chr8 (78-157)||(20455095-20455174)
chr8 (17-52)||(22617584-22617619)
chr8 (113-176)||(36732649-36732712)
chr8 (102-160)||(22483620-22483678)
chr8 (113-197)||(23883973-23884056)
[»] scaffold0001 (2 HSPs)
scaffold0001 (70-261)||(169180-169371)
scaffold0001 (70-261)||(176533-176724)
[»] scaffold0061 (2 HSPs)
scaffold0061 (102-261)||(14740-14899)
scaffold0061 (102-261)||(23798-23957)
[»] scaffold0200 (1 HSPs)
scaffold0200 (70-261)||(18334-18525)
[»] scaffold0462 (3 HSPs)
scaffold0462 (102-261)||(10962-11121)
scaffold0462 (114-197)||(1073-1156)
scaffold0462 (114-197)||(6579-6662)
[»] scaffold0083 (2 HSPs)
scaffold0083 (102-261)||(1676-1835)
scaffold0083 (73-135)||(42163-42225)
[»] scaffold0051 (1 HSPs)
scaffold0051 (70-257)||(31888-32074)
[»] scaffold0016 (2 HSPs)
scaffold0016 (73-176)||(174232-174335)
scaffold0016 (1-52)||(182097-182149)
[»] scaffold0328 (1 HSPs)
scaffold0328 (141-261)||(18835-18955)
[»] scaffold0220 (2 HSPs)
scaffold0220 (141-261)||(13687-13807)
scaffold0220 (174-237)||(8888-8951)
[»] scaffold0034 (1 HSPs)
scaffold0034 (102-243)||(29370-29511)
[»] scaffold0004 (2 HSPs)
scaffold0004 (1-78)||(385083-385160)
scaffold0004 (112-219)||(66243-66349)
[»] scaffold0293 (1 HSPs)
scaffold0293 (70-214)||(19420-19564)
[»] scaffold0070 (1 HSPs)
scaffold0070 (73-160)||(8932-9019)
[»] scaffold0058 (2 HSPs)
scaffold0058 (70-176)||(39933-40039)
scaffold0058 (192-261)||(6199-6268)
[»] scaffold0151 (1 HSPs)
scaffold0151 (71-176)||(9920-10025)
[»] scaffold0436 (1 HSPs)
scaffold0436 (102-261)||(8699-8858)
[»] scaffold0364 (1 HSPs)
scaffold0364 (73-160)||(8005-8092)
[»] scaffold0138 (2 HSPs)
scaffold0138 (102-257)||(33856-34010)
scaffold0138 (102-214)||(20883-20995)
[»] scaffold0956 (1 HSPs)
scaffold0956 (73-159)||(2219-2305)
[»] scaffold1439 (1 HSPs)
scaffold1439 (73-160)||(917-1004)
[»] scaffold0334 (1 HSPs)
scaffold0334 (70-176)||(1950-2056)
[»] scaffold0117 (1 HSPs)
scaffold0117 (70-235)||(42438-42603)
[»] scaffold1276 (1 HSPs)
scaffold1276 (70-177)||(964-1071)
[»] scaffold0057 (2 HSPs)
scaffold0057 (73-160)||(72278-72365)
scaffold0057 (102-235)||(70007-70140)
[»] scaffold0730 (1 HSPs)
scaffold0730 (140-261)||(6696-6818)
[»] scaffold0106 (1 HSPs)
scaffold0106 (74-168)||(21817-21911)
[»] scaffold0046 (1 HSPs)
scaffold0046 (102-176)||(21931-22005)
[»] scaffold0205 (1 HSPs)
scaffold0205 (110-214)||(5778-5881)
[»] scaffold0035 (2 HSPs)
scaffold0035 (111-214)||(39258-39361)
scaffold0035 (110-197)||(43949-44035)
[»] scaffold0148 (1 HSPs)
scaffold0148 (140-214)||(8627-8701)
[»] scaffold0026 (1 HSPs)
scaffold0026 (102-176)||(21946-22020)
[»] scaffold0877 (1 HSPs)
scaffold0877 (73-158)||(2151-2236)
[»] scaffold0290 (1 HSPs)
scaffold0290 (73-158)||(916-1001)
[»] scaffold0125 (2 HSPs)
scaffold0125 (73-158)||(1174-1259)
scaffold0125 (110-187)||(28365-28442)
[»] scaffold0394 (1 HSPs)
scaffold0394 (73-160)||(12891-12978)
[»] scaffold0515 (1 HSPs)
scaffold0515 (123-257)||(4779-4913)
[»] scaffold0306 (1 HSPs)
scaffold0306 (123-257)||(4779-4913)
[»] scaffold0037 (1 HSPs)
scaffold0037 (79-160)||(82839-82920)
[»] scaffold0031 (1 HSPs)
scaffold0031 (113-214)||(127510-127610)
[»] scaffold0023 (1 HSPs)
scaffold0023 (73-130)||(163205-163262)
[»] scaffold0676 (1 HSPs)
scaffold0676 (112-176)||(2638-2702)
[»] scaffold0113 (1 HSPs)
scaffold0113 (102-173)||(35319-35390)
[»] scaffold0090 (1 HSPs)
scaffold0090 (17-52)||(31514-31549)
[»] scaffold0112 (1 HSPs)
scaffold0112 (73-158)||(23247-23332)
[»] scaffold0555 (1 HSPs)
scaffold0555 (102-160)||(8951-9009)
[»] scaffold0213 (1 HSPs)
scaffold0213 (114-176)||(18939-19001)
[»] scaffold0086 (1 HSPs)
scaffold0086 (114-172)||(35652-35710)
[»] scaffold0278 (1 HSPs)
scaffold0278 (70-118)||(23839-23887)
[»] scaffold0149 (1 HSPs)
scaffold0149 (112-176)||(21364-21428)


Alignment Details
Target: chr4 (Bit Score: 237; Significance: 1e-131; HSPs: 29)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 15535122 - 15534862
Alignment:
Q  1 attttgatttagcatagttctagttgaaattgggaattgggggttaggtttttggagtattattcttggattgaaaagtgtagaaatcatgacaattgtg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  15535122 attttgatttagcatagttctagttgaaattgggaattgggggttaggtttttggagtatgattcttggattgaaaagtgtagaaatcatgacaattgtg 15535023  T
Q  101 ttaagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggtagatgaaaaattgggttttgggctgaaaactg 200  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||    
T  15535022 ttaagaatcgatgttcagattgtagaataaacatatgttgagtttcctatcaaatttggggtttgggtggatgaaaaattgggtttttggctgaaaactg 15534923  T
Q  201 gtctgttcccgtagggttgttcatcgcaactcgccacggcgagtaaacttactcgcctcgc 261  Q
    |||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  15534922 gtctgttcccgtagggttgttcgtcgcaactcgccacagcgagtaaacttactcgcctcgc 15534862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 36038811 - 36038551
Alignment:
Q  1 attttgatttagcatagttctagttgaaattgggaattgggggttaggtttttggagtattattcttggattgaaaagtgtagaaatcatgacaattgtg 100  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||  ||| ||||||||    
T  36038811 attttggtttagcatagttctagttgaaattgggaattgggggttaggtttttggagtatgattcttggattgaaaagtgtagaaacgatggcaattgtg 36038712  T
Q  101 ttaagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggtagatgaaaaattgggttttgggctgaaaactg 200  Q
    ||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||    
T  36038711 ttaagaatcgatgttcagattgtagaataaacataggttgagtttcctatcaaatttggggtttgggtggatgaaaaattgggtttttggctgaaaactg 36038612  T
Q  201 gtctgttcccgtagggttgttcatcgcaactcgccacggcgagtaaacttactcgcctcgc 261  Q
    |||||||||||||||||||||| |||||||||||||  |||||||||||||||||||||||    
T  36038611 gtctgttcccgtagggttgttcgtcgcaactcgccatagcgagtaaacttactcgcctcgc 36038551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 8 - 261
Target Start/End: Original strand, 49547003 - 49547255
Alignment:
Q  8 tttagcatagttctagttgaaattgggaattgggggttaggtttttggagtattattcttggattgaaaagtgtagaaatcatgacaattgtgttaagaa 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||  || |||||||||||||||||||||| |||| |||||||||||||||    
T  49547003 tttagcatagttctagttgaaattgggaattgggggttaggtttttggagtacgat-cttggattgaaaagtgtagaaaccatggcaattgtgttaagaa 49547101  T
Q  108 tcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggtagatgaaaaattgggttttgggctgaaaactggtctgtt 207  Q
    |||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  49547102 tcgatgttcagattgtagaataaacataggttgagtttcctatcaaatttggggtttgggtggatgaaaaattgggtttttggctgaaaactggtctgtt 49547201  T
Q  208 cccgtagggttgttcatcgcaactcgccacggcgagtaaacttactcgcctcgc 261  Q
    ||||||| ||||||| |||||||||||||| |||||||||||||||||||||||    
T  49547202 cccgtagagttgttcgtcgcaactcgccacagcgagtaaacttactcgcctcgc 49547255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 28 - 261
Target Start/End: Complemental strand, 33849716 - 33849483
Alignment:
Q  28 aattgggaattgggggttaggtttttggagtattattcttggattgaaaagtgtagaaatcatgacaattgtgttaagaatcgatgttcagattgtagaa 127  Q
    ||||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||||    
T  33849716 aattgggaattgggggttaggttttgggagtatgattcttgaattgaaaagtgtagaaaccatgacaattgtgttaagaatcgatgttcatgttgtagaa 33849617  T
Q  128 taaacatatgctgagtttcctatcaaatttggggtttgggtagatgaaaaattgggttttgggctgaaaactggtctgttcccgtagggttgttcatcgc 227  Q
    |||||||| | |||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| | ||||| ||||    
T  33849616 taaacataggttgagtttcctatcaaatttggggtttgggtggatgaaaaattgggtttttggctgaaaactggtctgttcccgtagagctgttcgtcgc 33849517  T
Q  228 aactcgccacggcgagtaaacttactcgcctcgc 261  Q
    |||||||||| |||||||||||||||||||||||    
T  33849516 aactcgccacagcgagtaaacttactcgcctcgc 33849483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 70 - 261
Target Start/End: Complemental strand, 28386175 - 28385984
Alignment:
Q  70 attgaaaagtgtagaaatcatgacaattgtgttaagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggta 169  Q
    ||||||||||||||||| |||   ||||||||||||||| ||||||||| ||||||||||| |||| | | ||||||||||||||||||||||||||||     
T  28386175 attgaaaagtgtagaaaccatcgaaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttggggtttgggtg 28386076  T
Q  170 gatgaaaaattgggttttgggctgaaaactggtctgttcccgtagggttgttcatcgcaactcgccacggcgagtaaacttactcgcctcgc 261  Q
    |||||||| ||||||||| ||||| |||||||||| || |||||| |||||   |||||||||||||| |||||||||||||||||||||||    
T  28386075 gatgaaaatttgggtttttggctggaaactggtctatttccgtagagttgtctgtcgcaactcgccacagcgagtaaacttactcgcctcgc 28385984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 28 - 177
Target Start/End: Original strand, 16277366 - 16277515
Alignment:
Q  28 aattgggaattgggggttaggtttttggagtattattcttggattgaaaagtgtagaaatcatgacaattgtgttaagaatcgatgttcagattgtagaa 127  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||| |||| |||||||||||||||| ||||||||| | ||||||    
T  16277366 aattgggaattgggggttaggttttgggagtatgattcttggattgaaaagtgtagaaaccatggcaattgtgttaagaattgatgttcaggtggtagaa 16277465  T
Q  128 taaacatatgctgagtttcctatcaaatttggggtttgggtagatgaaaa 177  Q
    ||| |||| | | |||||||||||||||||||||||||||||||||||||    
T  16277466 taatcataggttaagtttcctatcaaatttggggtttgggtagatgaaaa 16277515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 28 - 177
Target Start/End: Original strand, 53386976 - 53387125
Alignment:
Q  28 aattgggaattgggggttaggtttttggagtattattcttggattgaaaagtgtagaaatcatgacaattgtgttaagaatcgatgttcagattgtagaa 127  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||| |||| |||||||||||||||| ||||||||| | ||||||    
T  53386976 aattgggaattgggggttaggttttgggagtatgattcttggattgaaaagtgtagaaaccatggcaattgtgttaagaattgatgttcaggtggtagaa 53387075  T
Q  128 taaacatatgctgagtttcctatcaaatttggggtttgggtagatgaaaa 177  Q
    ||| |||| | | |||||||||||||||||||||||||||||||||||||    
T  53387076 taatcataggttaagtttcctatcaaatttggggtttgggtagatgaaaa 53387125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 141 - 261
Target Start/End: Complemental strand, 9638868 - 9638748
Alignment:
Q  141 agtttcctatcaaatttggggtttgggtagatgaaaaattgggttttgggctgaaaactggtctgttcccgtagggttgttcatcgcaactcgccacggc 240  Q
    |||||||||||||||||||||||||||| |||||||||||| ||||| | ||||||| |||||||||||||||| |||||   |||||||||||||| ||    
T  9638868 agtttcctatcaaatttggggtttgggtggatgaaaaattgagtttttgactgaaaattggtctgttcccgtagtgttgtctgtcgcaactcgccacagc 9638769  T
Q  241 gagtaaacttactcgcctcgc 261  Q
    |||||| ||||||||||||||    
T  9638768 gagtaagcttactcgcctcgc 9638748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 121 - 261
Target Start/End: Complemental strand, 15008847 - 15008707
Alignment:
Q  121 tgtagaataaacatatgctgagtttcctatcaaatttggggtttgggtagatgaaaaattgggttttgggctgaaaactggtctgttcccgtagggttgt 220  Q
    ||||||||||||||| | |||||||||||| ||||||||| ||||||| |||||||    || ||||||  |||||||||||||||||||||||  ||||    
T  15008847 tgtagaataaacataggttgagtttcctataaaatttgggatttgggttgatgaaattggggcttttggagtgaaaactggtctgttcccgtagatttgt 15008748  T
Q  221 tcatcgcaactcgccacggcgagtaaacttactcgcctcgc 261  Q
     | | |||||||||||| |||||||||||||||| ||||||    
T  15008747 ccgtggcaactcgccacagcgagtaaacttactcacctcgc 15008707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 102 - 261
Target Start/End: Original strand, 10694399 - 10694558
Alignment:
Q  102 taagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggtagatgaaaaattgggttttgggctgaaaactgg 201  Q
    ||||||| || ||||||  ||||||||||||||| | |||||||||||||||||||||| ||||||| |||||||    || ||||||  |||||| |||    
T  10694399 taagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttgggatttgggttgatgaaattggggcttttggagtgaaaattgg 10694498  T
Q  202 tctgttcccgtagggttgttcatcgcaactcgccacggcgagtaaacttactcgcctcgc 261  Q
    ||||||| |||||  |||| | |||| ||||||||| |||||||||| ||||||||||||    
T  10694499 tctgttctcgtagatttgtccgtcgccactcgccacagcgagtaaacgtactcgcctcgc 10694558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 73 - 160
Target Start/End: Complemental strand, 15344863 - 15344776
Alignment:
Q  73 gaaaagtgtagaaatcatgacaattgtgttaagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggg 160  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| |||| | | ||||||||| ||||||||||    
T  15344863 gaaaagtgtagaaatcatgacaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtttcctaacaaatttggg 15344776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 122 - 261
Target Start/End: Complemental strand, 40620410 - 40620271
Alignment:
Q  122 gtagaataaacatatgctgagtttcctatcaaatttggggtttgggtagatgaaaaattgggttttgggctgaaaactggtctgttcccgtagggttgtt 221  Q
    |||| ||||||||| | |||||||||| ||||||||||| ||||||| |||||||    || ||||||  |||||||||||||||||||||||  ||||     
T  40620410 gtaggataaacataggttgagtttcctctcaaatttgggatttgggttgatgaaattggggcttttggagtgaaaactggtctgttcccgtagatttgtc 40620311  T
Q  222 catcgcaactcgccacggcgagtaaacttactcgcctcgc 261  Q
    | ||||| ||||||||  ||||||||||||||||||||||    
T  40620310 cgtcgcacctcgccacaacgagtaaacttactcgcctcgc 40620271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 102 - 261
Target Start/End: Original strand, 10908165 - 10908324
Alignment:
Q  102 taagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggtagatgaaaaattgggttttgggctgaaaactgg 201  Q
    ||||||| || ||||||  ||||||||||||||| | ||||||||||||||||||||   ||||||| |||||||    || ||||||  |||||| |||    
T  10908165 taagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttgttatttgggttgatgaaattggggcttttggagtgaaaattgg 10908264  T
Q  202 tctgttcccgtagggttgttcatcgcaactcgccacggcgagtaaacttactcgcctcgc 261  Q
    ||||||| |||||  |||| | |||| ||||||||| |||||||||| ||||||||||||    
T  10908265 tctgttctcgtagatttgtccgtcgccactcgccacagcgagtaaacgtactcgcctcgc 10908324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 70 - 177
Target Start/End: Complemental strand, 18230672 - 18230565
Alignment:
Q  70 attgaaaagtgtagaaatcatgacaattgtgttaagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggta 169  Q
    |||||||||||||||||||||   ||||||||||||||| ||||||||| |||||| |||| |||| | | |||||||||||||||||||| |||| ||     
T  18230672 attgaaaagtgtagaaatcatcgaaattgtgttaagaattgatgttcaggttgtaggataatcataggataagtttcctatcaaatttgggatttgtgtt 18230573  T
Q  170 gatgaaaa 177  Q
    ||||||||    
T  18230572 gatgaaaa 18230565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 73 - 160
Target Start/End: Complemental strand, 12611839 - 12611752
Alignment:
Q  73 gaaaagtgtagaaatcatgacaattgtgttaagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggg 160  Q
    |||||||||||||| ||||| ||||||||||||||| ||||||||| ||||||||||| |||| | | ||||| ||| ||||||||||    
T  12611839 gaaaagtgtagaaaccatgataattgtgttaagaattgatgttcaggttgtagaataatcataggttaagttttctaacaaatttggg 12611752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 73 - 158
Target Start/End: Original strand, 15447501 - 15447586
Alignment:
Q  73 gaaaagtgtagaaatcatgacaattgtgttaagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttg 158  Q
    |||||||| ||||| ||||||||||||||||||||| ||||||||| ||||||||||| |||| | | ||||| ||| ||||||||    
T  15447501 gaaaagtgcagaaaccatgacaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtttgctaacaaatttg 15447586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 73 - 158
Target Start/End: Original strand, 23802528 - 23802613
Alignment:
Q  73 gaaaagtgtagaaatcatgacaattgtgttaagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttg 158  Q
    |||||||||||||| ||||  ||||||||||||||| ||||||||| ||||||||||| |||| | | ||||||||| ||||||||    
T  23802528 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtttcctaacaaatttg 23802613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 32490744 - 32490662
Alignment:
Q  1 attttgatttagcatagttctagttgaaattgggaattgggggttaggtttttggagtattattcttggattgaaaagtgtagaa 85  Q
    ||||||||||||||  ||||||||||||||||||||||||||||||||||||  |||||| ||| ||| ||| || |||||||||    
T  32490744 attttgatttagcaaggttctagttgaaattgggaattgggggttaggtttt--gagtatgatttttgaattaaagagtgtagaa 32490662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 112 - 176
Target Start/End: Complemental strand, 14549538 - 14549474
Alignment:
Q  112 tgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggtagatgaaa 176  Q
    ||||||| ||||||||||| |||||| | |||||||||||||||||||| |||||||||||||||    
T  14549538 tgttcaggttgtagaataatcatatgttaagtttcctatcaaatttgggatttgggtagatgaaa 14549474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 112 - 176
Target Start/End: Complemental strand, 35660776 - 35660712
Alignment:
Q  112 tgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggtagatgaaa 176  Q
    ||||||| ||||||||||| |||||| | |||||||||||||||||||| |||||||||||||||    
T  35660776 tgttcaggttgtagaataatcatatgttaagtttcctatcaaatttgggatttgggtagatgaaa 35660712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 73 - 160
Target Start/End: Original strand, 51463152 - 51463239
Alignment:
Q  73 gaaaagtgtagaaatcatgacaattgtgttaagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggg 160  Q
    |||||||||||||| ||||| ||||||||||||||| ||||||||| ||||||||||| |||| |   ||||| ||| ||||||||||    
T  51463152 gaaaagtgtagaaaccatgataattgtgttaagaattgatgttcaggttgtagaataatcataggtaaagttttctaacaaatttggg 51463239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 15415930 - 15416031
Alignment:
Q  1 attttgatttagcatag-ttctagttgaaattgggaattgggggttaggtttttggagtattattcttggattgaaaagtgtagaaatcatgacaattgt 99  Q
    ||||||||||||||  | ||||||||||| |||||| ||||||||||||||||  || ||| ||| ||| ||||||||||||||||  |||| |||| ||    
T  15415930 attttgatttagcaagggttctagttgaatttgggatttgggggttaggtttt--gattatgatttttgaattgaaaagtgtagaatccatggcaatagt 15416027  T
Q  100 gtta 103  Q
    ||||    
T  15416028 gtta 15416031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 112 - 176
Target Start/End: Original strand, 19434823 - 19434887
Alignment:
Q  112 tgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggtagatgaaa 176  Q
    ||||||| ||||||||||| |||| | | |||||||||||||||||||| ||| |||||||||||    
T  19434823 tgttcaggttgtagaataatcataggttaagtttcctatcaaatttgggattttggtagatgaaa 19434887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 73 - 130
Target Start/End: Original strand, 13043893 - 13043950
Alignment:
Q  73 gaaaagtgtagaaatcatgacaattgtgttaagaatcgatgttcagattgtagaataa 130  Q
    |||||||||||||| |||   ||||||||||||||| ||||||||| |||||||||||    
T  13043893 gaaaagtgtagaaaccatagtaattgtgttaagaattgatgttcaggttgtagaataa 13043950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 112 - 197
Target Start/End: Complemental strand, 16296759 - 16296674
Alignment:
Q  112 tgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggtagatgaaaaattgggttttgggctgaaaa 197  Q
    ||||||| |||| |||||| |||| | | |||||||||||||||||||| ||||||||||| |||  |||| |||| || ||||||    
T  16296759 tgttcaggttgttgaataatcataggttaagtttcctatcaaatttgggatttgggtagattaaattttggttttttgggtgaaaa 16296674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 16370771 - 16370872
Alignment:
Q  1 attttgatttagcatag-ttctagttgaaattgggaattgggggttaggtttttggagtattattcttggattgaaaagtgtagaaatcatgacaattgt 99  Q
    ||||||||||||||  | ||||||||||| |||| ||||||||||||||||||  || ||| ||| ||| |||||| ||||||||||  ||| |||| ||    
T  16370771 attttgatttagcaagggttctagttgaatttggaaattgggggttaggtttt--gattatgatttttgaattgaagagtgtagaaactatggcaatggt 16370868  T
Q  100 gtta 103  Q
    ||||    
T  16370869 gtta 16370872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 15318921 - 15318871
Alignment:
Q  1 attttgatttagcatagttctagttgaaattgggaa-ttgggggttaggtt 50  Q
    ||||||||||| || ||||||||||||||||||||| ||| ||||||||||    
T  15318921 attttgatttaacaaagttctagttgaaattgggaatttgcgggttaggtt 15318871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 113 - 157
Target Start/End: Complemental strand, 9622374 - 9622330
Alignment:
Q  113 gttcagattgtagaataaacatatgctgagtttcctatcaaattt 157  Q
    ||||||||||||||||||||||| | |||||||||| | ||||||    
T  9622374 gttcagattgtagaataaacataggttgagtttccttttaaattt 9622330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 118
Target Start/End: Complemental strand, 45005876 - 45005828
Alignment:
Q  70 attgaaaagtgtagaaatcatgacaattgtgttaagaatcgatgttcag 118  Q
    ||||||||||||||||| |||   ||||||||||||||| |||||||||    
T  45005876 attgaaaagtgtagaaaccattgaaattgtgttaagaattgatgttcag 45005828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 237; Significance: 1e-131; HSPs: 19)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 10683984 - 10684244
Alignment:
Q  1 attttgatttagcatagttctagttgaaattgggaattgggggttaggtttttggagtattattcttggattgaaaagtgtagaaatcatgacaattgtg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  10683984 attttgatttagcatagttctagttgaaattgggaattgggggttaggtttttggagtatgattcttggattgaaaagtgtagaaatcatgacaattgtg 10684083  T
Q  101 ttaagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggtagatgaaaaattgggttttgggctgaaaactg 200  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||    
T  10684084 ttaagaatcgatgttcagattgtagaataaacatatgttgagtttcctatcaaatttggggtttgggtggatgaaaaattgggtttttggctgaaaactg 10684183  T
Q  201 gtctgttcccgtagggttgttcatcgcaactcgccacggcgagtaaacttactcgcctcgc 261  Q
    |||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  10684184 gtctgttcccgtagggttgttcgtcgcaactcgccacagcgagtaaacttactcgcctcgc 10684244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 20262160 - 20261900
Alignment:
Q  1 attttgatttagcatagttctagttgaaattgggaattgggggttaggtttttggagtattattcttggattgaaaagtgtagaaatcatgacaattgtg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  20262160 attttgatttagcatagttctagttgaaattgggaattgggggttaggtttttggagtatgattcttggattgaaaagtgtagaaatcatgacaattgtg 20262061  T
Q  101 ttaagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggtagatgaaaaattgggttttgggctgaaaactg 200  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||    
T  20262060 ttaagaatcgatgttcagattgtagaataaacatatgttgagtttcctatcaaatttggggtttgggtggatgaaaaattgggtttttggctgaaaactg 20261961  T
Q  201 gtctgttcccgtagggttgttcatcgcaactcgccacggcgagtaaacttactcgcctcgc 261  Q
    |||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  20261960 gtctgttcccgtagggttgttcgtcgcaactcgccacagcgagtaaacttactcgcctcgc 20261900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 28 - 261
Target Start/End: Original strand, 23338478 - 23338711
Alignment:
Q  28 aattgggaattgggggttaggtttttggagtattattcttggattgaaaagtgtagaaatcatgacaattgtgttaagaatcgatgttcagattgtagaa 127  Q
    ||||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||||| |||| |||||||||||||||||||||||||| ||||||||    
T  23338478 aattgggaattgggggttaggttttgggagtatgattcttgaattgaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcaggttgtagaa 23338577  T
Q  128 taaacatatgctgagtttcctatcaaatttggggtttgggtagatgaaaaattgggttttgggctgaaaactggtctgttcccgtagggttgttcatcgc 227  Q
    |||||||| | |||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| ||||||| ||||    
T  23338578 taaacataggttgagtttcctatcaaatttggggtttgggtggatgaaaaattgggtttttggctgaaaactggtctgttcccgtagagttgttcgtcgc 23338677  T
Q  228 aactcgccacggcgagtaaacttactcgcctcgc 261  Q
    |||||||||| |||||||||||||||||||||||    
T  23338678 aactcgccacagcgagtaaacttactcgcctcgc 23338711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 13100786 - 13101046
Alignment:
Q  1 attttgatttagcatagttctagttgaaattgggaattgggggttaggtttttggagtattattcttggattgaaaagtgtagaaatcatgacaattgtg 100  Q
    |||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||| ||||||||    
T  13100786 attttggtttagcatagttctagttgaaattgtgaattgggggttaggtttttggagtatgattcttggattgaaaagtgtagaaaccatggcaattgtg 13100885  T
Q  101 ttaagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggtagatgaaaaattgggttttgggctgaaaactg 200  Q
    ||||||||||||||||||| |||||||||| |||| | | |||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||||    
T  13100886 ttaagaatcgatgttcagactgtagaataatcataggttaagtttcctatcaaatttggggtttgggtggatgaaaaattgggtttttggctggaaactg 13100985  T
Q  201 gtctgttcccgtagggttgttcatcgcaactcgccacggcgagtaaacttactcgcctcgc 261  Q
    |  ||||||||||| | |||   |||||||||||||| |||||||||||||||||||||||    
T  13100986 gcatgttcccgtagagatgtctgtcgcaactcgccacagcgagtaaacttactcgcctcgc 13101046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 32 - 176
Target Start/End: Original strand, 20590365 - 20590509
Alignment:
Q  32 gggaattgggggttaggtttttggagtattattcttggattgaaaagtgtagaaatcatgacaattgtgttaagaatcgatgttcagattgtagaataaa 131  Q
    ||||||||||||||||||||| ||||||| ||| ||||||||||||||||||||| |||| |||||||||||||||| ||||||||| | |||||||||     
T  20590365 gggaattgggggttaggttttgggagtatgattattggattgaaaagtgtagaaaccatggcaattgtgttaagaattgatgttcaggtggtagaataat 20590464  T
Q  132 catatgctgagtttcctatcaaatttggggtttgggtagatgaaa 176  Q
    |||| | | ||||| ||||||||||||||||||||||||||||||    
T  20590465 cataggttaagttttctatcaaatttggggtttgggtagatgaaa 20590509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 70 - 261
Target Start/End: Complemental strand, 31346051 - 31345860
Alignment:
Q  70 attgaaaagtgtagaaatcatgacaattgtgttaagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggta 169  Q
    ||||||||||||||||| |||   ||||||||||||||| || ||||||  | ||||||||||||| | |||||||||||||||||||||  |||||||     
T  31346051 attgaaaagtgtagaaaccatcgaaattgtgttaagaattgaagttcaggctatagaataaacataggttgagtttcctatcaaatttggtatttgggtt 31345952  T
Q  170 gatgaaaaattgggttttgggctgaaaactggtctgttcccgtagggttgttcatcgcaactcgccacggcgagtaaacttactcgcctcgc 261  Q
    |||||||    || ||||||  |||||||||||||||||||||||  |||| | |||||||||||||| ||||||| |||||||||||||||    
T  31345951 gatgaaattggggcttttggagtgaaaactggtctgttcccgtagatttgtccgtcgcaactcgccacagcgagtacacttactcgcctcgc 31345860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 102 - 261
Target Start/End: Complemental strand, 25184087 - 25183928
Alignment:
Q  102 taagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggtagatgaaaaattgggttttgggctgaaaactgg 201  Q
    ||||||| || ||||||| ||||||||||||||| | |||||||||||||||||||||| ||||||| |||||||    || ||||||  ||||||||||    
T  25184087 taagaattgaagttcagactgtagaataaacataggttgagtttcctatcaaatttgggatttgggttgatgaaattggggcttttggagtgaaaactgg 25183988  T
Q  202 tctgttcccgtagggttgttcatcgcaactcgccacggcgagtaaacttactcgcctcgc 261  Q
    |||||||||||||  |||| | |||||||||||||| ||||||| |||||||||||||||    
T  25183987 tctgttcccgtagatttgtccgtcgcaactcgccacagcgagtacacttactcgcctcgc 25183928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 102 - 261
Target Start/End: Original strand, 18358121 - 18358280
Alignment:
Q  102 taagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggtagatgaaaaattgggttttgggctgaaaactgg 201  Q
    ||||||| || ||||||  ||||||||||||||| | |||||||||||||||||||||| ||||||| |||||||    || ||||||  ||||||||||    
T  18358121 taagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttgggatttgggttgatgaaattggggcttttggagtgaaaactgg 18358220  T
Q  202 tctgttcccgtagggttgttcatcgcaactcgccacggcgagtaaacttactcgcctcgc 261  Q
    | |||||||||||  |||| | |||||||||||||| | |||||||||||| ||||||||    
T  18358221 tttgttcccgtagatttgtccgtcgcaactcgccacagtgagtaaacttacccgcctcgc 18358280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 70 - 197
Target Start/End: Original strand, 21072809 - 21072936
Alignment:
Q  70 attgaaaagtgtagaaatcatgacaattgtgttaagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggta 169  Q
    ||||||||||||| ||| |||   ||||||||||||||| ||||||||| |||| |||||| |||| | | ||||||||||||||||||||||||||||     
T  21072809 attgaaaagtgtaaaaaccatcgaaattgtgttaagaattgatgttcaggttgtggaataatcataggttaagtttcctatcaaatttggggtttgggtg 21072908  T
Q  170 gatgaaaaattgggttttgggctgaaaa 197  Q
    |||||||| |||||||||||| ||||||    
T  21072909 gatgaaaatttgggttttggggtgaaaa 21072936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 102 - 261
Target Start/End: Original strand, 21081123 - 21081282
Alignment:
Q  102 taagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggtagatgaaaaattgggttttgggctgaaaactgg 201  Q
    ||||||| || ||||||  ||||||||||||||| | ||||||||||||||||||| || ||||||| |||||||    || ||||||  ||||||| ||    
T  21081123 taagaattgaagttcaggctgtagaataaacataagttgagtttcctatcaaatttaggatttgggttgatgaaattggggcttttggagtgaaaacggg 21081222  T
Q  202 tctgttcccgtagggttgttcatcgcaactcgccacggcgagtaaacttactcgcctcgc 261  Q
    ||| |||||||||  || | | |||| ||||||||| |||||||||||||||||||||||    
T  21081223 tcttttcccgtagatttttccgtcgccactcgccacagcgagtaaacttactcgcctcgc 21081282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 102 - 261
Target Start/End: Complemental strand, 21915522 - 21915363
Alignment:
Q  102 taagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggtagatgaaaaattgggttttgggctgaaaactgg 201  Q
    ||||||| || ||||||  ||||||||||||||| | |||||||||||| ||||||||| ||| ||| |||||||    || ||||||  ||||||||||    
T  21915522 taagaattgaagttcaggctgtagaataaacataggttgagtttcctataaaatttgggatttaggttgatgaaattggggcttttggagtgaaaactgg 21915423  T
Q  202 tctgttcccgtagggttgttcatcgcaactcgccacggcgagtaaacttactcgcctcgc 261  Q
    | ||||||| ||   |||| | ||||||||||||||||||||||||| ||||||||||||    
T  21915422 tttgttcccatacatttgtccgtcgcaactcgccacggcgagtaaacatactcgcctcgc 21915363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 70 - 176
Target Start/End: Original strand, 41301050 - 41301156
Alignment:
Q  70 attgaaaagtgtagaaatcatgacaattgtgttaagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggta 169  Q
    ||||||||||||||||| |||   ||||||||||||||| ||||||||| ||||||||||| |||| | | |||||||||||||| ||||| ||||||||    
T  41301050 attgaaaagtgtagaaaccatcgaaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaaattgggatttgggta 41301149  T
Q  170 gatgaaa 176  Q
    |||||||    
T  41301150 gatgaaa 41301156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 73 - 160
Target Start/End: Original strand, 43707171 - 43707258
Alignment:
Q  73 gaaaagtgtagaaatcatgacaattgtgttaagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggg 160  Q
    |||||||||||||| |||| |||||||||||||||| ||||||||  ||||||||||| |||| | | ||||||||||||||||||||    
T  43707171 gaaaagtgtagaaaccatggcaattgtgttaagaattgatgttcaagttgtagaataatcataggttaagtttcctatcaaatttggg 43707258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 73 - 160
Target Start/End: Complemental strand, 7187354 - 7187267
Alignment:
Q  73 gaaaagtgtagaaatcatgacaattgtgttaagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggg 160  Q
    |||||||||||||| ||||| ||||||||||||||| ||||||| | ||||||||||| ||||   | ||||||||| ||||||||||    
T  7187354 gaaaagtgtagaaaccatgataattgtgttaagaattgatgttctggttgtagaataatcatagattaagtttcctaacaaatttggg 7187267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 112 - 176
Target Start/End: Original strand, 149670 - 149734
Alignment:
Q  112 tgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggtagatgaaa 176  Q
    |||||||||||| |||||| |||| | | |||||||||||||||||||| |||||||||||||||    
T  149670 tgttcagattgttgaataatcataggttaagtttcctatcaaatttgggatttgggtagatgaaa 149734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 73 - 160
Target Start/End: Original strand, 22173101 - 22173188
Alignment:
Q  73 gaaaagtgtagaaatcatgacaattgtgttaagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggg 160  Q
    |||||||||||||| ||||  ||||||||||||||| ||||||||| ||||||||||| |||| | |  |||| ||| ||||||||||    
T  22173101 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttatgttttctaacaaatttggg 22173188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 25652225 - 25652174
Alignment:
Q  1 attttgatttagcatagttctagttgaaattgggaattgggggttaggtttt 52  Q
    |||||| |||||||   |||||||||||||||||||||||||||||||||||    
T  25652225 attttggtttagcaagattctagttgaaattgggaattgggggttaggtttt 25652174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 103 - 160
Target Start/End: Original strand, 12626587 - 12626644
Alignment:
Q  103 aagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggg 160  Q
    |||||| ||||||||| |||||||||||||||| | ||||||||||||  ||||||||    
T  12626587 aagaattgatgttcaggttgtagaataaacataagttgagtttcctattgaatttggg 12626644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 120 - 197
Target Start/End: Original strand, 28345208 - 28345284
Alignment:
Q  120 ttgtagaataaacatatgctgagtttcctatcaaatttggggtttgggtagatgaaaaattgggttttgggctgaaaa 197  Q
    ||||||||||| |||| | | |||||||||||||||||||| ||| ||||||| |||| ||||||||| || ||||||    
T  28345208 ttgtagaataatcataggttaagtttcctatcaaatttgggatttaggtagat-aaaatttgggtttttgggtgaaaa 28345284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 229; Significance: 1e-126; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 37804124 - 37804384
Alignment:
Q  1 attttgatttagcatagttctagttgaaattgggaattgggggttaggtttttggagtattattcttggattgaaaagtgtagaaatcatgacaattgtg 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  37804124 attttgatttagcatagttctagtagaaattgggaattgggggttaggtttttggagtatgattcttggattgaaaagtgtagaaatcatgacaattgtg 37804223  T
Q  101 ttaagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggtagatgaaaaattgggttttgggctgaaaactg 200  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||    
T  37804224 ttaagaatcgatgttcagattgtagaataaacatatgttgagtttcctatcaaatttggggtttgggtggatgaaaaattgggtttttggctgaaaactg 37804323  T
Q  201 gtctgttcccgtagggttgttcatcgcaactcgccacggcgagtaaacttactcgcctcgc 261  Q
    |||||||||||||||||||||| |||||||||||||| |||||||||| ||||||||||||    
T  37804324 gtctgttcccgtagggttgttcgtcgcaactcgccacagcgagtaaacgtactcgcctcgc 37804384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 9777106 - 9776846
Alignment:
Q  1 attttgatttagcatagttctagttgaaattgggaattgggggttaggtttttggagtattattcttggattgaaaagtgtagaaatcatgacaattgtg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||    
T  9777106 attttgatttagcatagttctagttgaaattgggaattgggggttaggtttttggagtatgattcttggattgaaaagtgtagaaatcatgacaattatg 9777007  T
Q  101 ttaagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggtagatgaaaaattgggttttgggctgaaaactg 200  Q
    ||||||||||||||||||||||||||||||||||| | | |||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||    
T  9777006 ttaagaatcgatgttcagattgtagaataaacataggttaagtttcctatcaaatttggggtttgggtggatgaaaaattgggtttttggctgaaaactg 9776907  T
Q  201 gtctgttcccgtagggttgttcatcgcaactcgccacggcgagtaaacttactcgcctcgc 261  Q
    |||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  9776906 gtctgttcccgtagggttgttcgtcgcaactcgccacagcgagtaaacttactcgcctcgc 9776846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 181; E-Value: 7e-98
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 41875644 - 41875904
Alignment:
Q  1 attttgatttagcatagttctagttgaaattgggaattgggggttaggtttttggagtattattcttggattgaaaagtgtagaaatcatgacaattgtg 100  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||| ||||||||    
T  41875644 attttggtttagcatagttctagttgaaattgggaattgggggttaggtttttggagtatgattcttggattgaaaagtgtagaaaccatggcaattgtg 41875743  T
Q  101 ttaagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggtagatgaaaaattgggttttgggctgaaaactg 200  Q
    ||||||||||||||||||| |||||||||| |||| | | |||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||||    
T  41875744 ttaagaatcgatgttcagactgtagaataatcataggttaagtttcctatcaaatttggggtttgggtggatgaaaaattgggtttttggctggaaactg 41875843  T
Q  201 gtctgttcccgtagggttgttcatcgcaactcgccacggcgagtaaacttactcgcctcgc 261  Q
    |  ||||||||||| | |||   |||||||||||||| |||||||||||||||||||||||    
T  41875844 gcatgttcccgtagagctgtctgtcgcaactcgccacagcgagtaaacttactcgcctcgc 41875904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 70 - 261
Target Start/End: Original strand, 27868695 - 27868886
Alignment:
Q  70 attgaaaagtgtagaaatcatgacaattgtgttaagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggta 169  Q
    ||||||||||||||||| |||   ||||||||||||||| ||||||||| ||||||||||| |||| | | ||||||||||||||||||||||||||||     
T  27868695 attgaaaagtgtagaaaccatcgaaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttggggtttgggtg 27868794  T
Q  170 gatgaaaaattgggttttgggctgaaaactggtctgttcccgtagggttgttcatcgcaactcgccacggcgagtaaacttactcgcctcgc 261  Q
    |||||||||||||||||| ||||| |||||||||||||||||||| |||||   |||||||||||||| |||||||||||||||||||||||    
T  27868795 gatgaaaaattgggtttttggctggaaactggtctgttcccgtagagttgtctgtcgcaactcgccacagcgagtaaacttactcgcctcgc 27868886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 70 - 261
Target Start/End: Original strand, 33472684 - 33472875
Alignment:
Q  70 attgaaaagtgtagaaatcatgacaattgtgttaagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggta 169  Q
    ||||||||||||||||| |||   ||||||||||||||| ||||||||| ||||||||||| |||| | | |||||||||||||||||||| |||||||     
T  33472684 attgaaaagtgtagaaaccatcgaaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttgggatttgggtg 33472783  T
Q  170 gatgaaaaattgggttttgggctgaaaactggtctgttcccgtagggttgttcatcgcaactcgccacggcgagtaaacttactcgcctcgc 261  Q
    |||||||||||||||||| ||||| |||||||||||||||||||| |||||   |||||||||||||| |||||||||||||||||||||||    
T  33472784 gatgaaaaattgggtttttggctggaaactggtctgttcccgtagagttgtctgtcgcaactcgccacagcgagtaaacttactcgcctcgc 33472875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 102 - 261
Target Start/End: Complemental strand, 17011626 - 17011467
Alignment:
Q  102 taagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggtagatgaaaaattgggttttgggctgaaaactgg 201  Q
    ||||||| || ||||||  ||||||||||||||| | |||||||||||||||||||||| ||||||| |||||||    || ||| ||  ||||||||||    
T  17011626 taagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttgggatttgggttgatgaaattggggctttaggagtgaaaactgg 17011527  T
Q  202 tctgttcccgtagggttgttcatcgcaactcgccacggcgagtaaacttactcgcctcgc 261  Q
    |||||||||||||  |||| | |||||| ||||||| |||||||||||||||||||||||    
T  17011526 tctgttcccgtagatttgtccgtcgcaagtcgccaccgcgagtaaacttactcgcctcgc 17011467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 102 - 261
Target Start/End: Complemental strand, 29448738 - 29448579
Alignment:
Q  102 taagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggtagatgaaaaattgggttttgggctgaaaactgg 201  Q
    ||||||| || ||||||  ||||||||||||||| | |||||||||||||||||||| | |||| || |||||||    || ||||||  ||||||||||    
T  29448738 taagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttgagatttgagttgatgaaattggggcttttggagtgaaaactgg 29448639  T
Q  202 tctgttcccgtagggttgttcatcgcaactcgccacggcgagtaaacttactcgcctcgc 261  Q
    |||||||||||||  |||| | ||||||||||| || |||||||||| ||||||||||||    
T  29448638 tctgttcccgtagatttgtccgtcgcaactcgctacagcgagtaaacctactcgcctcgc 29448579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 70 - 176
Target Start/End: Complemental strand, 18419383 - 18419277
Alignment:
Q  70 attgaaaagtgtagaaatcatgacaattgtgttaagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggta 169  Q
    ||||||||||||||||| |||   ||||||||||||||| ||||||||| ||||||||||| ||||   | |||||||||||||||||| | ||||||||    
T  18419383 attgaaaagtgtagaaaccatcgaaattgtgttaagaattgatgttcaggttgtagaataatcatagattaagtttcctatcaaatttgagatttgggta 18419284  T
Q  170 gatgaaa 176  Q
    |||||||    
T  18419283 gatgaaa 18419277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 102 - 214
Target Start/End: Complemental strand, 265936 - 265824
Alignment:
Q  102 taagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggtagatgaaaaattgggttttgggctgaaaactgg 201  Q
    ||||||| || ||||||  ||||||||||||||| | |||||||||||||||||||||| ||||| | |||||||    || |||| |  ||||||||||    
T  265936 taagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttgggatttggattgatgaaattggggcttttcgagtgaaaactgg 265837  T
Q  202 tctgttcccgtag 214  Q
    |||||||||||||    
T  265836 tctgttcccgtag 265824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 104 - 176
Target Start/End: Original strand, 24594218 - 24594290
Alignment:
Q  104 agaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggtagatgaaa 176  Q
    ||||| ||||||||| | ||||||||| |||| | | ||||||||||||||||||||||||||||||||||||    
T  24594218 agaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaa 24594290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 104 - 174
Target Start/End: Original strand, 24668312 - 24668382
Alignment:
Q  104 agaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggtagatga 174  Q
    ||||| ||||||||| | ||||||||| |||| | | ||||||||||||||||||||||||||||||||||    
T  24668312 agaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatga 24668382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 104 - 174
Target Start/End: Original strand, 24738081 - 24738151
Alignment:
Q  104 agaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggtagatga 174  Q
    ||||| ||||||||| | ||||||||| |||| | | ||||||||||||||||||||||||||||||||||    
T  24738081 agaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatga 24738151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 104 - 174
Target Start/End: Original strand, 24750850 - 24750920
Alignment:
Q  104 agaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggtagatga 174  Q
    ||||| ||||||||| | ||||||||| |||| | | ||||||||||||||||||||||||||||||||||    
T  24750850 agaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatga 24750920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 110 - 197
Target Start/End: Complemental strand, 21504029 - 21503943
Alignment:
Q  110 gatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggtagatgaaaaattgggttttgggctgaaaa 197  Q
    ||||||||| ||||||||||| |||| | ||||||||||||  |||||||| ||||||| | || ||||||||||||| |||||||||    
T  21504029 gatgttcaggttgtagaataatcataggttgagtttcctattgaatttgggatttgggtggttg-aaaattgggtttttggctgaaaa 21503943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 7786181 - 7786090
Alignment:
Q  1 attttgatttagcatagttctagttgaaattgggaattgggggttaggtttttggagtattattcttggattgaaaagtgtagaaatcatgaca 94  Q
    |||||| |||||||  |||| |||||||||||||||||||||||||||||||  |||||| ||| ||| ||| || |||||||||  |||||||    
T  7786181 attttggtttagcagggttccagttgaaattgggaattgggggttaggtttt--gagtatgatttttgaattaaagagtgtagaatccatgaca 7786090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 110 - 187
Target Start/End: Original strand, 21398960 - 21399037
Alignment:
Q  110 gatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggtagatgaaaaattgggtttt 187  Q
    ||||||||| |||||||||||||||| |  |||||| |||| ||||||||| ||||||||||||| |  |||||||||    
T  21398960 gatgttcaggttgtagaataaacataggaagagttttctataaaatttgggatttgggtagatgagattttgggtttt 21399037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 26707375 - 26707324
Alignment:
Q  1 attttgatttagcatagttctagttgaaattgggaattgggggttaggtttt 52  Q
    |||||| |||||||  ||||||||||||||||||||||||| ||||||||||    
T  26707375 attttggtttagcaaggttctagttgaaattgggaattgggagttaggtttt 26707324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 26977109 - 26977058
Alignment:
Q  1 attttgatttagcatagttctagttgaaattgggaattgggggttaggtttt 52  Q
    |||||| |||||||  ||||||||||||||||||||||||| ||||||||||    
T  26977109 attttggtttagcaaggttctagttgaaattgggaattgggagttaggtttt 26977058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 110 - 214
Target Start/End: Complemental strand, 20313165 - 20313061
Alignment:
Q  110 gatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggtagatgaaaaattgggttttgggctg-aaaactggtctgttc 208  Q
    ||||||||  || |||||||||||||   ||||||||||||  |||||||| ||||||| | || ||||||||||||| ||||| ||||||||| | |||    
T  20313165 gatgttcaagttatagaataaacatagattgagtttcctattgaatttgggatttgggtggttg-aaaattgggtttttggctgaaaaactggtttcttc 20313067  T
Q  209 ccgtag 214  Q
    ||||||    
T  20313066 ccgtag 20313061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 73 - 158
Target Start/End: Complemental strand, 22413015 - 22412930
Alignment:
Q  73 gaaaagtgtagaaatcatgacaattgtgttaagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttg 158  Q
    |||||||||||||| ||||  ||||||||||||||| |||||| |  ||||||||||| |||| | | ||||| ||| ||||||||    
T  22413015 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgtttatgttgtagaataatcataggttaagttttctaacaaatttg 22412930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 70 - 103
Target Start/End: Original strand, 21553508 - 21553541
Alignment:
Q  70 attgaaaagtgtagaaatcatgacaattgtgtta 103  Q
    ||||||||||||||||| ||||||||||||||||    
T  21553508 attgaaaagtgtagaaaccatgacaattgtgtta 21553541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 172
Target Start/End: Original strand, 36508915 - 36508967
Alignment:
Q  120 ttgtagaataaacatatgctgagtttcctatcaaatttggggtttgggtagat 172  Q
    ||||||||||| |||| | | |||||||||||||||||||| ||| |||||||    
T  36508915 ttgtagaataatcataggttaagtttcctatcaaatttgggatttaggtagat 36508967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 225; Significance: 1e-124; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 12306063 - 12305803
Alignment:
Q  1 attttgatttagcatagttctagttgaaattgggaattgggggttaggtttttggagtattattcttggattgaaaagtgtagaaatcatgacaattgtg 100  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||    
T  12306063 attttggtttagcatagttctagttgaaattgggaattgggggttaggtttttggagtatgattcttggattgaaaagtgtagaaaccatgacaattgtg 12305964  T
Q  101 ttaagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggtagatgaaaaattgggttttgggctgaaaactg 200  Q
    ||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||    
T  12305963 ttaagaatcgatgttcagattgtagaataaacataggttgagtttcctatcaaatttggggtttgggtggatgaaaaattgggtttttggctgaaaactg 12305864  T
Q  201 gtctgttcccgtagggttgttcatcgcaactcgccacggcgagtaaacttactcgcctcgc 261  Q
    |||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  12305863 gtctgttcccgtagggttgttcgtcgcaactcgccacagcgagtaaacttactcgcctcgc 12305803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 8 - 261
Target Start/End: Complemental strand, 54521756 - 54521503
Alignment:
Q  8 tttagcatagttctagttgaaattgggaattgggggttaggtttttggagtattattcttggattgaaaagtgtagaaatcatgacaattgtgttaagaa 107  Q
    |||||||||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||||||||||||||||| |||| |||||||||||||||    
T  54521756 tttagcatagttctagttgaaattggaaattgagggttaggtttttggagtatgattcttggattgaaaagtgtagaaaccatggcaattgtgttaagaa 54521657  T
Q  108 tcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggtagatgaaaaattgggttttgggctgaaaactggtctgtt 207  Q
    |||||||||||||||||||||||| ||| | |||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  54521656 tcgatgttcagattgtagaataaatataggttgagtttcctatcaaatttggggtttgggtggatgaaaaattgggtttttggctgaaaactggtctgtt 54521557  T
Q  208 cccgtagggttgttcatcgcaactcgccacggcgagtaaacttactcgcctcgc 261  Q
     |||||| ||||||| |||||||||||||| |||||||||||||||||||||||    
T  54521556 tccgtagagttgttcgtcgcaactcgccacagcgagtaaacttactcgcctcgc 54521503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 29544085 - 29544319
Alignment:
Q  1 attttgatttagcatagttctagttgaaattgggaattgggggttaggtttttggagtattattcttggattgaaaagtgtagaaatcatgacaattgtg 100  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||| |||||||||||||    
T  29544085 attttggtttagcatagttctagttgaaattgggaattgggggttaggtttttggggtatgattcttggattgaaaagtgtagaaaccatgacaattgtg 29544184  T
Q  101 ttaagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggtagatgaaaaattgggttttgggctgaaaactg 200  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||| || |||||||||||||||||| ||||||||||||    
T  29544185 ttaagaatcgatgttcagattgtagaataaacataggttgagtttcctatcaaatttggggtttgagtggatgaaaaattgggtttttggctgaaaactg 29544284  T
Q  201 gtctgttcccgtagggttgttcatcgcaactcgcc 235  Q
    |||||||||||||||||||||| || |||||||||    
T  29544285 gtctgttcccgtagggttgttcgtcacaactcgcc 29544319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 3803814 - 3803580
Alignment:
Q  1 attttgatttagcatagttctagttgaaattgggaattgggggttaggtttttggagtattattcttggattgaaaagtgtagaaatcatgacaattgtg 100  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| |||||||||||||    
T  3803814 attttggtttagcatagttctagttgaaattgggaattgggggttaggtttttggagtatgattcttgaattgaaaagtgtagaaaccatgacaattgtg 3803715  T
Q  101 ttaagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggtagatgaaaaattgggttttgggctgaaaactg 200  Q
    ||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||||    
T  3803714 ttaagaatcgatgttcagattgtagaataaacataggttgagtttcctatcaaatttggggtttgggtggatgaaaaattgggtttttggctggaaactg 3803615  T
Q  201 gtctgttcccgtagggttgttcatcgcaactcgcc 235  Q
    |||||||||||||| |||||   ||||||||||||    
T  3803614 gtctgttcccgtagagttgtctgtcgcaactcgcc 3803580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 70 - 261
Target Start/End: Complemental strand, 13437170 - 13436979
Alignment:
Q  70 attgaaaagtgtagaaatcatgacaattgtgttaagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggta 169  Q
    ||||||||||||||||| ||    ||||||||||||||||||||||||| |||||||||||||||| | ||||||||||||||||||||||||||||||     
T  13437170 attgaaaagtgtagaaaccaacgaaattgtgttaagaatcgatgttcaggttgtagaataaacataggttgagtttcctatcaaatttggggtttgggtg 13437071  T
Q  170 gatgaaaaattgggttttgggctgaaaactggtctgttcccgtagggttgttcatcgcaactcgccacggcgagtaaacttactcgcctcgc 261  Q
     ||||||||||||||||| |||||||||||||||||||||| ||| ||||||| |||||||||||||| |||||||||||||||||||||||    
T  13437070 aatgaaaaattgggtttttggctgaaaactggtctgttcccatagagttgttcgtcgcaactcgccacagcgagtaaacttactcgcctcgc 13436979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 55291653 - 55291828
Alignment:
Q  1 attttgatttagcatagttctagttgaaattgggaattgggggttaggtttttggagtattattcttggattgaaaagtgtagaaatcatgacaattgtg 100  Q
    |||||| ||||| ||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||| |||| ||||||||    
T  55291653 attttggtttagaatagttctagttgaaattgggaattgggggttaggttttgggagtatgattcttggattgaaaagtgtagaaaccatggcaattgtg 55291752  T
Q  101 ttaagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggtagatgaaa 176  Q
    |||||||| ||||||||| ||||||||||| |||| | | |||||||||||||||||||||||||||| |||||||    
T  55291753 ttaagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttggggtttgggttgatgaaa 55291828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 70 - 261
Target Start/End: Complemental strand, 42459 - 42268
Alignment:
Q  70 attgaaaagtgtagaaatcatgacaattgtgttaagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggta 169  Q
    ||||||||||||||||| |||   ||||||||||||||| ||||||||| ||||||||||| |||| | | ||||||||||||||||||||||||||||     
T  42459 attgaaaagtgtagaaaccatcgaaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttggggtttgggtg 42360  T
Q  170 gatgaaaaattgggttttgggctgaaaactggtctgttcccgtagggttgttcatcgcaactcgccacggcgagtaaacttactcgcctcgc 261  Q
    |||||||||||||||||| ||||| |||||||||||||||||||| |||||   ||| |||||||||| |||||||||||||||||||||||    
T  42359 gatgaaaaattgggtttttggctggaaactggtctgttcccgtagagttgtctgtcgaaactcgccacagcgagtaaacttactcgcctcgc 42268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 70 - 261
Target Start/End: Original strand, 16324661 - 16324852
Alignment:
Q  70 attgaaaagtgtagaaatcatgacaattgtgttaagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggta 169  Q
    |||| |||||||||||| |||   ||||||||||||||| ||||||||| |||||||||||  |||   | ||||||||||||||||||||||||||||     
T  16324661 attggaaagtgtagaaaccattgaaattgtgttaagaattgatgttcaggttgtagaataattatagcttaagtttcctatcaaatttggggtttgggtg 16324760  T
Q  170 gatgaaaaattgggttttgggctgaaaactggtctgttcccgtagggttgttcatcgcaactcgccacggcgagtaaacttactcgcctcgc 261  Q
    |||||||||||||||||| ||||| |||||||||||||||||||| |||||   |||||||||||||| |||||||||||||||||||||||    
T  16324761 gatgaaaaattgggtttttggctggaaactggtctgttcccgtagagttgtctgtcgcaactcgccacagcgagtaaacttactcgcctcgc 16324852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 46722638 - 46722801
Alignment:
Q  1 attttgatttagcatagttctagttgaaattgggaattgggggttaggtttttggagtattattcttggattgaaaagtgtagaaatcatgacaattgtg 100  Q
    |||||| ||||| ||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| ||||  ||| ||||||||    
T  46722638 attttggtttagaatagttctagttgaaattgggaattgggggttaggttttgggagtatgattcttggattgaaaagtgtggaaactatggcaattgtg 46722737  T
Q  101 ttaagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggttt 164  Q
    |||||||| ||||||||| ||||||||||| |||| | | ||||||||||||||||||||||||    
T  46722738 ttaagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttggggttt 46722801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 28 - 176
Target Start/End: Complemental strand, 10555280 - 10555132
Alignment:
Q  28 aattgggaattgggggttaggtttttggagtattattcttggattgaaaagtgtagaaatcatgacaattgtgttaagaatcgatgttcagattgtagaa 127  Q
    ||||||||||||||| ||||||||| ||||||| ||||||||||||||||||||||||| |||| |||||||||||||||| ||||||||| | ||||||    
T  10555280 aattgggaattggggtttaggttttgggagtatgattcttggattgaaaagtgtagaaaccatggcaattgtgttaagaattgatgttcaggtggtagaa 10555181  T
Q  128 taaacatatgctgagtttcctatcaaatttggggtttgggtagatgaaa 176  Q
    ||| |||| | | |||||||||||||||||||||||| |||||||||||    
T  10555180 taatcataggttaagtttcctatcaaatttggggtttcggtagatgaaa 10555132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 70 - 260
Target Start/End: Complemental strand, 5224254 - 5224065
Alignment:
Q  70 attgaaaagtgtagaaatcatgacaattgtgttaagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggta 169  Q
    ||||||||||||||||| |||   ||||||||||||||| || ||||||  ||||||||||||||| | |||||||||||||||||||||| |||||||     
T  5224254 attgaaaagtgtagaaaccattgaaattgtgttaagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttgggatttgggtt 5224155  T
Q  170 gatgaaaaattgggttttgggctgaaaactggtctgttcccgtagggttgttcatcgcaactcgccacggcgagtaaacttactcgcctcg 260  Q
    |||| ||| | |||||||||  |||||||| || |||||||||||  ||||   |||||||||||||| ||||||| ||||||||||||||    
T  5224154 gatg-aaattggggttttggagtgaaaactagtttgttcccgtagatttgtctgtcgcaactcgccacagcgagtacacttactcgcctcg 5224065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 70 - 261
Target Start/End: Original strand, 26054555 - 26054746
Alignment:
Q  70 attgaaaagtgtagaaatcatgacaattgtgttaagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggta 169  Q
    |||||||| |||||||| |||   ||||||||||||||| || ||||||  ||||||||||||||| | |||||||||||||||||||||| |||||||     
T  26054555 attgaaaattgtagaaaccatcgaaattgtgttaagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttgggatttgggtt 26054654  T
Q  170 gatgaaaaattgggttttgggctgaaaactggtctgttcccgtagggttgttcatcgcaactcgccacggcgagtaaacttactcgcctcgc 261  Q
    |||||||    || ||||||  ||||||||||||||||| |||||  |||| | |||||||||||||| || |||| |||||||||||||||    
T  26054655 gatgaaattggggcttttggagtgaaaactggtctgttctcgtagatttgtccgtcgcaactcgccacagcaagtacacttactcgcctcgc 26054746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 141 - 261
Target Start/End: Original strand, 14641742 - 14641862
Alignment:
Q  141 agtttcctatcaaatttggggtttgggtagatgaaaaattgggttttgggctgaaaactggtctgttcccgtagggttgttcatcgcaactcgccacggc 240  Q
    |||||||||||||||||||| ||||||| |||||||||||||||||| ||||||||||||||||||||||| || | |||   |||||||||||||| ||    
T  14641742 agtttcctatcaaatttgggatttgggtggatgaaaaattgggtttttggctgaaaactggtctgttcccgcagtgctgtctgtcgcaactcgccacagc 14641841  T
Q  241 gagtaaacttactcgcctcgc 261  Q
    || |||| |||||||||||||    
T  14641842 gaataaatttactcgcctcgc 14641862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 70 - 261
Target Start/End: Complemental strand, 15466026 - 15465835
Alignment:
Q  70 attgaaaagtgtagaaatcatgacaattgtgttaagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggta 169  Q
    ||||||||||||||||| |||   ||||||||||||||| || ||||||  ||||||||||||||| | ||||||||||||||||| |||| |||||||     
T  15466026 attgaaaagtgtagaaaccatcgaaattgtgttaagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatatgggatttgggtt 15465927  T
Q  170 gatgaaaaattgggttttgggctgaaaactggtctgttcccgtagggttgttcatcgcaactcgccacggcgagtaaacttactcgcctcgc 261  Q
    |||||||    || |||| |  ||||||||||||||||| |||||  |||| | ||||||| | |||| ||||||| |||||||||||||||    
T  15465926 gatgaaattggggcttttagagtgaaaactggtctgttctcgtagatttgtccgtcgcaacccaccacagcgagtacacttactcgcctcgc 15465835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 102 - 261
Target Start/End: Complemental strand, 16979810 - 16979651
Alignment:
Q  102 taagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggtagatgaaaaattgggttttgggctgaaaactgg 201  Q
    ||||||| || ||||||  ||||||||||||||| | |||||||||||||||||||||  ||||||| |||||||    || ||||||  ||||||||||    
T  16979810 taagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttggaatttgggttgatgaaattggggcttttggagtgaaaactgg 16979711  T
Q  202 tctgttcccgtagggttgttcatcgcaactcgccacggcgagtaaacttactcgcctcgc 261  Q
    |||||||||||||  ||||   ||| |||||||||| |||||||||||||||||||||||    
T  16979710 tctgttcccgtagatttgtctgtcgtaactcgccacagcgagtaaacttactcgcctcgc 16979651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 102 - 261
Target Start/End: Complemental strand, 22652671 - 22652512
Alignment:
Q  102 taagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggtagatgaaaaattgggttttgggctgaaaactgg 201  Q
    ||||||| || ||||||  ||||||||||||||| | |||||||||||||||||||||| ||||||| |||||||    || ||||||  |||||||| |    
T  22652671 taagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttgggatttgggttgatgaaattggggcttttggagtgaaaactag 22652572  T
Q  202 tctgttcccgtagggttgttcatcgcaactcgccacggcgagtaaacttactcgcctcgc 261  Q
    |||||||||||||  |||| | | |||||||||||| ||||||| |||||||||||||||    
T  22652571 tctgttcccgtagatttgtccgttgcaactcgccacagcgagtacacttactcgcctcgc 22652512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 70 - 176
Target Start/End: Original strand, 43549776 - 43549882
Alignment:
Q  70 attgaaaagtgtagaaatcatgacaattgtgttaagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggta 169  Q
    ||||||||||||||||| |||   ||||||||||||||| ||||||||| ||||||||||| |||| | | |||||||||||||||||||| ||||||||    
T  43549776 attgaaaagtgtagaaaccatcgaaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttgggatttgggta 43549875  T
Q  170 gatgaaa 176  Q
    |||||||    
T  43549876 gatgaaa 43549882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 94 - 190
Target Start/End: Complemental strand, 18890331 - 18890235
Alignment:
Q  94 aattgtgttaagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggtagatgaaaaattgggttttggg 190  Q
    ||||||||||||||| ||||||||| |||| |||||| |||| | | |||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  18890331 aattgtgttaagaattgatgttcaggttgtggaataatcataggttaagtttcctatcaaatttggggtttgggtggatgaaaatttgggttttggg 18890235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 94 - 202
Target Start/End: Complemental strand, 18893590 - 18893482
Alignment:
Q  94 aattgtgttaagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggtagatgaaaaattgggttttgggctg 193  Q
    ||||||||||||||| ||||||||  |||| |||||| |||| | | ||||| |||||||||||||||||||||| |||||||| |||||||||||| ||    
T  18893590 aattgtgttaagaattgatgttcacgttgtggaataatcataggttaagttttctatcaaatttggggtttgggtggatgaaaatttgggttttggggtg 18893491  T
Q  194 aaaactggt 202  Q
    |||| ||||    
T  18893490 aaaaatggt 18893482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 73 - 173
Target Start/End: Complemental strand, 43929319 - 43929219
Alignment:
Q  73 gaaaagtgtagaaatcatgacaattgtgttaagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggtagat 172  Q
    |||||||||||||| ||||  ||||||||||||| | |||||| || ||||||||||| | || | | |||||||||||||||||||| |||||||||||    
T  43929319 gaaaagtgtagaaaccatgctaattgtgttaagacttgatgtttaggttgtagaataatcgtaggttaagtttcctatcaaatttgggatttgggtagat 43929220  T
Q  173 g 173  Q
    |    
T  43929219 g 43929219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 73 - 160
Target Start/End: Complemental strand, 6820098 - 6820011
Alignment:
Q  73 gaaaagtgtagaaatcatgacaattgtgttaagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggg 160  Q
    ||||||||||||||  ||| |||||||||||||||| ||||||||| ||||||||||| |||| | | ||||||||| ||||||||||    
T  6820098 gaaaagtgtagaaactatgtcaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtttcctaacaaatttggg 6820011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 70 - 160
Target Start/End: Original strand, 10833426 - 10833516
Alignment:
Q  70 attgaaaagtgtagaaatcatgacaattgtgttaagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggg 160  Q
    ||||||||||||||||| |||   ||||||||||||||| ||||| ||||||| ||||||| |||| | | ||||||||||||||||||||    
T  10833426 attgaaaagtgtagaaaccatcgaaattgtgttaagaattgatgtccagattgcagaataatcataggttaagtttcctatcaaatttggg 10833516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 124 - 214
Target Start/End: Complemental strand, 29907512 - 29907422
Alignment:
Q  124 agaataaacatatgctgagtttcctatcaaatttggggtttgggtagatgaaaaattgggttttgggctgaaaactggtctgttcccgtag 214  Q
    |||||||||||| |  || |||||||||||||||||  ||||||| | |||||||||||||||| |||||||||||||| | |||||||||    
T  29907512 agaataaacataggtagaatttcctatcaaatttggaatttgggtggttgaaaaattgggtttttggctgaaaactggtttcttcccgtag 29907422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 124 - 214
Target Start/End: Complemental strand, 29948678 - 29948588
Alignment:
Q  124 agaataaacatatgctgagtttcctatcaaatttggggtttgggtagatgaaaaattgggttttgggctgaaaactggtctgttcccgtag 214  Q
    |||||||||||| |  || |||||||||||||||||  ||||||| | |||||||||||||||| |||||||||||||| | |||||||||    
T  29948678 agaataaacataggtagaatttcctatcaaatttggaatttgggtggttgaaaaattgggtttttggctgaaaactggtttcttcccgtag 29948588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 124 - 214
Target Start/End: Complemental strand, 29997832 - 29997742
Alignment:
Q  124 agaataaacatatgctgagtttcctatcaaatttggggtttgggtagatgaaaaattgggttttgggctgaaaactggtctgttcccgtag 214  Q
    |||||||||||| |  || |||||||||||||||||  ||||||| | |||||||||||||||| |||||||||||||| | |||||||||    
T  29997832 agaataaacataggtagaatttcctatcaaatttggaatttgggtggttgaaaaattgggtttttggctgaaaactggtttcttcccgtag 29997742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 73 - 158
Target Start/End: Complemental strand, 16644011 - 16643926
Alignment:
Q  73 gaaaagtgtagaaatcatgacaattgtgttaagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttg 158  Q
    |||||||||||||| ||||| ||||||||||||||| ||||||||| ||||||||||| |||| | | || |||||| ||||||||    
T  16644011 gaaaagtgtagaaaccatgataattgtgttaagaattgatgttcaggttgtagaataatcataggttaagcttcctaacaaatttg 16643926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 110 - 199
Target Start/End: Original strand, 48043640 - 48043729
Alignment:
Q  110 gatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggtagatgaaaaattgggttttgggctgaaaact 199  Q
    ||||||||  |||||||||||||||| | ||||||||||||  |||||||| ||||||| | |||||||||||||||| || ||||||||    
T  48043640 gatgttcaagttgtagaataaacataggttgagtttcctattgaatttgggatttgggtggttgaaaaattgggtttttggatgaaaact 48043729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 102 - 214
Target Start/End: Original strand, 45803491 - 45803602
Alignment:
Q  102 taagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggtagatgaaaaattgggttttgggctgaaaactgg 201  Q
    ||||||| ||||| ||| |||||||||||||||| | ||||||||||||  |||||||| || |||| | || ||||||||||||| |||||||||| ||    
T  45803491 taagaattgatgtccaggttgtagaataaacataggttgagtttcctattgaatttgggattagggtggttg-aaaattgggtttttggctgaaaacagg 45803589  T
Q  202 tctgttcccgtag 214  Q
    | | |||||||||    
T  45803590 tttcttcccgtag 45803602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 73 - 158
Target Start/End: Complemental strand, 50243741 - 50243656
Alignment:
Q  73 gaaaagtgtagaaatcatgacaattgtgttaagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttg 158  Q
    |||||||||||||| ||||  ||||||||||||||| ||||||||  ||||||||||| |||| | | ||||||||| ||||||||    
T  50243741 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcatgttgtagaataatcataggttaagtttcctaacaaatttg 50243656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 74 - 158
Target Start/End: Original strand, 24152509 - 24152593
Alignment:
Q  74 aaaagtgtagaaatcatgacaattgtgttaagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttg 158  Q
    ||||||||||||| ||||  ||||||||||||||| ||||||||| ||||||||||| |||| | | |||||| || ||||||||    
T  24152509 aaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtttcataacaaatttg 24152593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 119 - 214
Target Start/End: Original strand, 3527327 - 3527421
Alignment:
Q  119 attgtagaataaacatatgctgagtttcctatcaaatttggggtttgggtagatgaaaaattgggttttgggctgaaaactggtctgttcccgtag 214  Q
    ||||||||||||||||| | ||||||||||||  |||||||| ||||||| | || ||||||||||||| |||||||||  ||| | |||||||||    
T  3527327 attgtagaataaacataggttgagtttcctattgaatttgggatttgggtggttg-aaaattgggtttttggctgaaaataggtttcttcccgtag 3527421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 15239060 - 15238978
Alignment:
Q  1 attttgatttagcatagttctagttgaaattgggaattgggggttaggtttttggagtattattcttggattgaaaagtgtagaa 85  Q
    |||||| |||||||  ||||||||| ||||||||||||||||||||||||||  |||||| ||| ||| ||| || |||||||||    
T  15239060 attttggtttagcaaggttctagttaaaattgggaattgggggttaggtttt--gagtatgatttttgaattaaagagtgtagaa 15238978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 123 - 200
Target Start/End: Complemental strand, 25202013 - 25201936
Alignment:
Q  123 tagaataaacatatgctgagtttcctatcaaatttggggtttgggtagatgaaaaattgggttttgggctgaaaactg 200  Q
    ||||||||||||| | ||||||||||||  |||||||| ||||| | | |||||| || |||||| ||||||||||||    
T  25202013 tagaataaacataggttgagtttcctattgaatttgggatttggatggttgaaaattttggtttttggctgaaaactg 25201936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 110 - 187
Target Start/End: Original strand, 50350979 - 50351056
Alignment:
Q  110 gatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggtagatgaaaaattgggtttt 187  Q
    ||||||||| ||||| |||||||||| |  |||||| |||| ||||||||| ||||||||||||| |  |||||||||    
T  50350979 gatgttcaggttgtataataaacataggaagagttttctataaaatttgggatttgggtagatgagattttgggtttt 50351056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 160
Target Start/End: Original strand, 6805091 - 6805139
Alignment:
Q  112 tgttcagattgtagaataaacatatgctgagtttcctatcaaatttggg 160  Q
    ||||||| ||||||||||| |||||| | ||||| ||||||||||||||    
T  6805091 tgttcaggttgtagaataatcatatgttaagttttctatcaaatttggg 6805139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 222; Significance: 1e-122; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 29797552 - 29797291
Alignment:
Q  1 attttgatttagcatagttctagttgaaattgggaattgggggttaggttttt-ggagtattattcttggattgaaaagtgtagaaatcatgacaattgt 99  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||    
T  29797552 attttgatttagcatagttctagctgaaattgggaattgggggttaggttttttggagtatgattcttggattgaaaagtgtagaaatcatgacaattgt 29797453  T
Q  100 gttaagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggtagatgaaaaattgggttttgggctgaaaact 199  Q
    |||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||    
T  29797452 gttaggaatcgatgttcagattgtagaataaacatatgttgagtttcctatcaaatttggggtttgggtggatgaaaaattgggtttttggctgaaaact 29797353  T
Q  200 ggtctgttcccgtagggttgttcatcgcaactcgccacggcgagtaaacttactcgcctcgc 261  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  29797352 ggtctgttcccgtagggttgttcgtcgcaactcgccacagcgagtaaacttactcgcctcgc 29797291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 29801371 - 29801110
Alignment:
Q  1 attttgatttagcatagttctagttgaaattgggaattgggggttaggttttt-ggagtattattcttggattgaaaagtgtagaaatcatgacaattgt 99  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||    
T  29801371 attttgatttagcatagttctagctgaaattgggaattgggggttaggttttttggagtatgattcttggattgaaaagtgtagaaatcatgacaattgt 29801272  T
Q  100 gttaagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggtagatgaaaaattgggttttgggctgaaaact 199  Q
    |||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||    
T  29801271 gttaggaatcgatgttcagattgtagaataaacatatgttgagtttcctatcaaatttggggtttgggtggatgaaaaattgggtttttggctgaaaact 29801172  T
Q  200 ggtctgttcccgtagggttgttcatcgcaactcgccacggcgagtaaacttactcgcctcgc 261  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  29801171 ggtctgttcccgtagggttgttcgtcgcaactcgccacagcgagtaaacttactcgcctcgc 29801110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 23664174 - 23664434
Alignment:
Q  1 attttgatttagcatagttctagttgaaattgggaattgggggttaggtttttggagtattattcttggattgaaaagtgtagaaatcatgacaattgtg 100  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||    
T  23664174 attttggtttagcatagttctagttgaaattgggaattgggggttaggtttttggagtatgattcttggattgaaaagtgtagaaaccatgacaattgtg 23664273  T
Q  101 ttaagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggtagatgaaaaattgggttttgggctgaaaactg 200  Q
    ||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||    
T  23664274 ttaagaatcgatgttcagattgtagaataaacataggttgagtttcctatcaaatttggggtttgggtggatgaaaaattgggtttttggctgaaaactg 23664373  T
Q  201 gtctgttcccgtagggttgttcatcgcaactcgccacggcgagtaaacttactcgcctcgc 261  Q
    |||||||||||||||||||||| |||||||||||||| |||||||||| ||||||||||||    
T  23664374 gtctgttcccgtagggttgttcgtcgcaactcgccacagcgagtaaacgtactcgcctcgc 23664434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 11304188 - 11303928
Alignment:
Q  1 attttgatttagcatagttctagttgaaattgggaattgggggttaggtttttggagtattattcttggattgaaaagtgtagaaatcatgacaattgtg 100  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||| ||||||||    
T  11304188 attttggtttagcatagttctagttgaaattgggaattgggggttaggtttttggagtatgattcttggattgaaaagtgtagaaaccatggcaattgtg 11304089  T
Q  101 ttaagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggtagatgaaaaattgggttttgggctgaaaactg 200  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| |||||||| |||||||||||||||||| ||||||||||||    
T  11304088 ttaagaatcgatgttcagattgtagaataaacataggttgagtttcctatcaaatttggtgtttgggtggatgaaaaattgggtttttggctgaaaactg 11303989  T
Q  201 gtctgttcccgtagggttgttcatcgcaactcgccacggcgagtaaacttactcgcctcgc 261  Q
    |||||||||||||||||||||| |||||||||||||| |||||||||| ||||||||||||    
T  11303988 gtctgttcccgtagggttgttcgtcgcaactcgccacagcgagtaaacatactcgcctcgc 11303928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 70 - 261
Target Start/End: Original strand, 16107979 - 16108170
Alignment:
Q  70 attgaaaagtgtagaaatcatgacaattgtgttaagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggta 169  Q
    ||||||||||||||||| |||   |||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||     
T  16107979 attgaaaagtgtagaaaccatcgaaattgtgttaagaatcgatgttcagattgtagaataaacataggttgagtttcctatcaaatttggggtttgggtg 16108078  T
Q  170 gatgaaaaattgggttttgggctgaaaactggtctgttcccgtagggttgttcatcgcaactcgccacggcgagtaaacttactcgcctcgc 261  Q
    |||||||||||||||||| |||||||||||||||||||||||||| ||||||| |||||||||||||| |||||||||||||||||||||||    
T  16108079 gatgaaaaattgggtttttggctgaaaactggtctgttcccgtagagttgttcgtcgcaactcgccacagcgagtaaacttactcgcctcgc 16108170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 14105479 - 14105654
Alignment:
Q  1 attttgatttagcatagttctagttgaaattgggaattgggggttaggtttttggagtattattcttggattgaaaagtgtagaaatcatgacaattgtg 100  Q
    |||||| ||||| |||||||||| |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| |||| |||| ||||||||    
T  14105479 attttggtttagaatagttctagctgaaattgggaattgggggttaggttttgggagtatgattcttggattgaaaagtgtggaaaccatggcaattgtg 14105578  T
Q  101 ttaagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggtagatgaaa 176  Q
    |||||||| ||||||||| ||||||||||| |||| | | |||||||||||||||||||||||||||| |||||||    
T  14105579 ttaagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttggggtttgggttgatgaaa 14105654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 14415496 - 14415671
Alignment:
Q  1 attttgatttagcatagttctagttgaaattgggaattgggggttaggtttttggagtattattcttggattgaaaagtgtagaaatcatgacaattgtg 100  Q
    |||||| ||||| |||||||||| |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| |||| |||| ||||||||    
T  14415496 attttggtttagaatagttctagctgaaattgggaattgggggttaggttttgggagtatgattcttggattgaaaagtgtggaaaccatggcaattgtg 14415595  T
Q  101 ttaagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggtagatgaaa 176  Q
    |||||||| ||||||||| ||||||||||| |||| | | |||||||||||||||||||||||||||| |||||||    
T  14415596 ttaagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttggggtttgggttgatgaaa 14415671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 70 - 261
Target Start/End: Complemental strand, 11662037 - 11661846
Alignment:
Q  70 attgaaaagtgtagaaatcatgacaattgtgttaagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggta 169  Q
    ||||||||||||| ||| |||   ||||||||||||||| ||||||||| ||||||| |||  ||| | | ||||||||||||||||||||||||||||     
T  11662037 attgaaaagtgtaaaaaccatcgaaattgtgttaagaattgatgttcaggttgtagactaattataggttaagtttcctatcaaatttggggtttgggtg 11661938  T
Q  170 gatgaaaaattgggttttgggctgaaaactggtctgttcccgtagggttgttcatcgcaactcgccacggcgagtaaacttactcgcctcgc 261  Q
    |||||||||||||||||| ||||  |||||||||||||||||||| |||||   |||||||||||||| |||||||||||||||||||||||    
T  11661937 gatgaaaaattgggtttttggctagaaactggtctgttcccgtagagttgtctgtcgcaactcgccacagcgagtaaacttactcgcctcgc 11661846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 28 - 177
Target Start/End: Original strand, 17505043 - 17505192
Alignment:
Q  28 aattgggaattgggggttaggtttttggagtattattcttggattgaaaagtgtagaaatcatgacaattgtgttaagaatcgatgttcagattgtagaa 127  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||| |||| |||||||||||||||| ||||||||| | ||||||    
T  17505043 aattgggaattgggggttaggttttgggagtatgattcttggattgaaaagtgtagaaaccatggcaattgtgttaagaattgatgttcaggtggtagaa 17505142  T
Q  128 taaacatatgctgagtttcctatcaaatttggggtttgggtagatgaaaa 177  Q
    ||| |||| | | ||||||||||||||||||| |||||||||||||||||    
T  17505143 taatcataggttaagtttcctatcaaatttggagtttgggtagatgaaaa 17505192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 28 - 177
Target Start/End: Complemental strand, 17548171 - 17548022
Alignment:
Q  28 aattgggaattgggggttaggtttttggagtattattcttggattgaaaagtgtagaaatcatgacaattgtgttaagaatcgatgttcagattgtagaa 127  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||| |||| |||||||||||||||| ||||||||| | ||||||    
T  17548171 aattgggaattgggggttaggttttgggagtatgattcttggattgaaaagtgtagaaaccatggcaattgtgttaagaattgatgttcaggtggtagaa 17548072  T
Q  128 taaacatatgctgagtttcctatcaaatttggggtttgggtagatgaaaa 177  Q
    ||| |||| | | ||||||||||||||||||| |||||||||||||||||    
T  17548071 taatcataggttaagtttcctatcaaatttggagtttgggtagatgaaaa 17548022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 70 - 258
Target Start/End: Original strand, 14188414 - 14188602
Alignment:
Q  70 attgaaaagtgtagaaatcatgacaattgtgttaagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggta 169  Q
    ||||||| ||||||||| |||   ||||||||||||||| ||||||||  ||||||||||| |||| | | ||||||||||||||||||||||||||||     
T  14188414 attgaaatgtgtagaaaccatcgaaattgtgttaagaattgatgttcaagttgtagaataatcataggttaagtttcctatcaaatttggggtttgggtg 14188513  T
Q  170 gatgaaaaattgggttttgggctgaaaactggtctgttcccgtagggttgttcatcgcaactcgccacggcgagtaaacttactcgcct 258  Q
    |||||||||||||||||| ||||| |||||||||||||||||||| |||     |||||||||||||| |||| |||||||||||||||    
T  14188514 gatgaaaaattgggtttttggctggaaactggtctgttcccgtagagtttcctgtcgcaactcgccacagcgattaaacttactcgcct 14188602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 70 - 261
Target Start/End: Original strand, 13917693 - 13917884
Alignment:
Q  70 attgaaaagtgtagaaatcatgacaattgtgttaagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggta 169  Q
    ||||||||||||||||| |||   ||||||||||||||| || ||||||  ||||||||||||||| | |||||||||||||||||||||| | |||||     
T  13917693 attgaaaagtgtagaaaccatcgaaattgtgttaagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttgggatctgggtt 13917792  T
Q  170 gatgaaaaattgggttttgggctgaaaactggtctgttcccgtagggttgttcatcgcaactcgccacggcgagtaaacttactcgcctcgc 261  Q
    |||||||    || ||||||  |||||||||||||||||||||||  |||| | |||||||||||||| ||||||| ||| |||||||||||    
T  13917793 gatgaaattggggcttttggagtgaaaactggtctgttcccgtagatttgtccgtcgcaactcgccacagcgagtacactcactcgcctcgc 13917884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 70 - 261
Target Start/End: Original strand, 1856521 - 1856712
Alignment:
Q  70 attgaaaagtgtagaaatcatgacaattgtgttaagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggta 169  Q
    ||||||||||||||||| |||   ||||||||||||||| || ||||||  ||||||||||||||| | |||||||||||||||||||||| |||||||     
T  1856521 attgaaaagtgtagaaaccatcgaaattgtgttaagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttgggatttgggtt 1856620  T
Q  170 gatgaaaaattgggttttgggctgaaaactggtctgttcccgtagggttgttcatcgcaactcgccacggcgagtaaacttactcgcctcgc 261  Q
    |||||||    || ||||||  | ||||||| |||||||||||||  ||||   |||||||||||||| ||||||| |||||||||||||||    
T  1856621 gatgaaattggggcttttggagtaaaaactgatctgttcccgtagatttgtctgtcgcaactcgccacagcgagtacacttactcgcctcgc 1856712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 70 - 261
Target Start/End: Original strand, 25926420 - 25926611
Alignment:
Q  70 attgaaaagtgtagaaatcatgacaattgtgttaagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggta 169  Q
    ||||||||||||||||| |||   ||||||||||||||| || ||||||  ||||||||||||||| | | |||||||||| ||||||||| |||||||     
T  25926420 attgaaaagtgtagaaaccatcgaaattgtgttaagaattgaagttcaggctgtagaataaacataggttcagtttcctataaaatttgggatttgggtt 25926519  T
Q  170 gatgaaaaattgggttttgggctgaaaactggtctgttcccgtagggttgttcatcgcaactcgccacggcgagtaaacttactcgcctcgc 261  Q
    |||||||    ||  |||||  |||||||||||||||||||||||  |||| | |||||||||||||| ||||||| |||||||||||||||    
T  25926520 gatgaaattggggcatttggagtgaaaactggtctgttcccgtagatttgtccgtcgcaactcgccacagcgagtacacttactcgcctcgc 25926611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 141 - 255
Target Start/End: Original strand, 17070483 - 17070597
Alignment:
Q  141 agtttcctatcaaatttggggtttgggtagatgaaaaattgggttttgggctgaaaactggtctgttcccgtagggttgttcatcgcaactcgccacggc 240  Q
    |||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||| |||||||| |||||   |||||||||||||| ||    
T  17070483 agtttcctatcaaatttggggtttgggtggatgaaaaattgggtttttggctgaaaactagtctgctcccgtagagttgtctgtcgcaactcgccactgc 17070582  T
Q  241 gagtaaacttactcg 255  Q
    |||||||||||||||    
T  17070583 gagtaaacttactcg 17070597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 77 - 176
Target Start/End: Complemental strand, 4326020 - 4325921
Alignment:
Q  77 agtgtagaaatcatgacaattgtgttaagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggtagatgaaa 176  Q
    |||||||||| ||||||||||||||||||||| ||||||||| ||||||||||| |||| | | |||||||||||||||||||| ||||||| |||||||    
T  4326020 agtgtagaaaccatgacaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttgggatttgggtggatgaaa 4325921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 102 - 261
Target Start/End: Original strand, 16550156 - 16550315
Alignment:
Q  102 taagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggtagatgaaaaattgggttttgggctgaaaactgg 201  Q
    ||||||| || ||||||  ||||||||||||||| | ||||||| |||||||||||||| ||||||| |||||||    || ||||||   |||||||||    
T  16550156 taagaattgaagttcaggctgtagaataaacataggttgagttttctatcaaatttgggatttgggttgatgaaattggggcttttggaaagaaaactgg 16550255  T
Q  202 tctgttcccgtagggttgttcatcgcaactcgccacggcgagtaaacttactcgcctcgc 261  Q
    | ||||||| |||  |||  |||||||||||||||| |||||||||||||||||||||||    
T  16550256 tatgttcccatagatttgcccatcgcaactcgccacagcgagtaaacttactcgcctcgc 16550315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 102 - 261
Target Start/End: Complemental strand, 16615506 - 16615347
Alignment:
Q  102 taagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggtagatgaaaaattgggttttgggctgaaaactgg 201  Q
    ||||||| || ||||||  ||||||||||||||| | ||||||| |||||||||||||| ||||||| |||||||    || ||||||   |||||||||    
T  16615506 taagaattgaagttcaggctgtagaataaacataggttgagttttctatcaaatttgggatttgggttgatgaaattggggcttttggaaagaaaactgg 16615407  T
Q  202 tctgttcccgtagggttgttcatcgcaactcgccacggcgagtaaacttactcgcctcgc 261  Q
    | ||||||| |||  |||  |||||||||||||||| |||||||||||||||||||||||    
T  16615406 tatgttcccatagatttgcccatcgcaactcgccacagcgagtaaacttactcgcctcgc 16615347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 73 - 160
Target Start/End: Original strand, 13864486 - 13864573
Alignment:
Q  73 gaaaagtgtagaaatcatgacaattgtgttaagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggg 160  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||| |||| | | ||||||||| ||||||||||    
T  13864486 gaaaagtgtagaaatcatgacaattgtgttaagaattgatgttcagattgtataataatcataggttaagtttcctaacaaatttggg 13864573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 73 - 176
Target Start/End: Original strand, 39431311 - 39431414
Alignment:
Q  73 gaaaagtgtagaaatcatgacaattgtgttaagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggtagat 172  Q
    |||||||||||||| |||| |||||||||||||||| ||||||||| ||||||||||| |||||| |  |||||||||||||| |||| |||||||| ||    
T  39431311 gaaaagtgtagaaaccatgtcaattgtgttaagaattgatgttcaggttgtagaataatcatatgttatgtttcctatcaaatatgggatttgggtaaat 39431410  T
Q  173 gaaa 176  Q
    ||||    
T  39431411 gaaa 39431414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 73 - 176
Target Start/End: Original strand, 44190340 - 44190443
Alignment:
Q  73 gaaaagtgtagaaatcatgacaattgtgttaagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggtagat 172  Q
    |||||||| ||||| ||||||||||| ||||||||| ||||||||| ||||||||||| |||| | | ||||||||||||||| |||| |||||||||||    
T  44190340 gaaaagtgaagaaaacatgacaattgagttaagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatgtgggatttgggtagat 44190439  T
Q  173 gaaa 176  Q
    ||||    
T  44190440 gaaa 44190443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 60 - 177
Target Start/End: Complemental strand, 13256634 - 13256517
Alignment:
Q  60 ttattcttggattgaaaagtgtagaaatcatgacaattgtgttaagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttgg 159  Q
    ||||| ||| |||||||||||||||||||||   ||||||||||||||| ||||||||  |||||| |||| |||| | | |||||||||||||||||||    
T  13256634 ttatttttgaattgaaaagtgtagaaatcatcgaaattgtgttaagaattgatgttcaagttgtaggataatcataggataagtttcctatcaaatttgg 13256535  T
Q  160 ggtttgggtagatgaaaa 177  Q
    | ||||||| ||||||||    
T  13256534 gatttgggttgatgaaaa 13256517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 70 - 176
Target Start/End: Complemental strand, 13648213 - 13648107
Alignment:
Q  70 attgaaaagtgtagaaatcatgacaattgtgttaagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggta 169  Q
    ||||||||||||||||| ||| | ||||||||||||||| |||||| || ||||||||||| |||| | | | |||||||||||||||||| ||| ||||    
T  13648213 attgaaaagtgtagaaaccatcaaaattgtgttaagaattgatgtttaggttgtagaataatcataggttaaatttcctatcaaatttgggatttaggta 13648114  T
Q  170 gatgaaa 176  Q
    |||||||    
T  13648113 gatgaaa 13648107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 102 - 257
Target Start/End: Original strand, 32160354 - 32160509
Alignment:
Q  102 taagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggtagatgaaaaattgggttttgggctgaaaactgg 201  Q
    ||||||| || ||||||  ||||||||||||||| | |||||||||||||||||||| | ||||| | |||||||    || ||||||  ||||||||||    
T  32160354 taagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttgagatttggattgatgaaattggggcttttggagtgaaaactgg 32160453  T
Q  202 tctgttcccgtagggttgttcatcgcaactcgccacggcgagtaaacttactcgcc 257  Q
    | ||||  |||||  || | | |||||||||||||| |||||||||||||||||||    
T  32160454 tttgtttgcgtagatttttccgtcgcaactcgccacagcgagtaaacttactcgcc 32160509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 73 - 160
Target Start/End: Complemental strand, 16462997 - 16462910
Alignment:
Q  73 gaaaagtgtagaaatcatgacaattgtgttaagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggg 160  Q
    |||| |||||||||  ||| |||||||||||||||| ||||||||| ||||||||||| ||||   | ||||||||||||||||||||    
T  16462997 gaaatgtgtagaaacgatggcaattgtgttaagaattgatgttcaggttgtagaataatcatagattaagtttcctatcaaatttggg 16462910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 114 - 176
Target Start/End: Complemental strand, 19195078 - 19195016
Alignment:
Q  114 ttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggtagatgaaa 176  Q
    ||||||||||||||||| |||| | | |||||||||||||||||||| |||||||||||||||    
T  19195078 ttcagattgtagaataatcataggttaagtttcctatcaaatttgggatttgggtagatgaaa 19195016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 73 - 130
Target Start/End: Complemental strand, 23557461 - 23557404
Alignment:
Q  73 gaaaagtgtagaaatcatgacaattgtgttaagaatcgatgttcagattgtagaataa 130  Q
    |||||||||||||| |||||||||||||||| |||| ||||||||| |||||||||||    
T  23557461 gaaaagtgtagaaaccatgacaattgtgttatgaattgatgttcaggttgtagaataa 23557404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 112 - 176
Target Start/End: Original strand, 12754829 - 12754893
Alignment:
Q  112 tgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggtagatgaaa 176  Q
    ||||||| ||||||||||| |||| | | |||||||||||||||||||| |||||||||||||||    
T  12754829 tgttcaggttgtagaataatcataggttaagtttcctatcaaatttgggatttgggtagatgaaa 12754893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 12207741 - 12207792
Alignment:
Q  1 attttgatttagcatagttctagttgaaattgggaattgggggttaggtttt 52  Q
    |||||| |||||||  ||||||||||||||||||||||||||||||||||||    
T  12207741 attttggtttagcaaggttctagttgaaattgggaattgggggttaggtttt 12207792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 112 - 214
Target Start/End: Original strand, 13315245 - 13315347
Alignment:
Q  112 tgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggtagatgaaaaattgggttttgggctgaaaactggtctgttcccg 211  Q
    ||||||| ||||||||||| |||| |  |||||| |||||||||||||| ||||||| |||||||    || ||||||  ||||||||||||||||| ||    
T  13315245 tgttcaggttgtagaataatcataggtagagttttctatcaaatttgggatttgggttgatgaaattggggtttttggagtgaaaactggtctgttctcg 13315344  T
Q  212 tag 214  Q
    |||    
T  13315345 tag 13315347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 73 - 130
Target Start/End: Original strand, 18455712 - 18455769
Alignment:
Q  73 gaaaagtgtagaaatcatgacaattgtgttaagaatcgatgttcagattgtagaataa 130  Q
    |||||||||||||| ||||  ||||||||||||||| ||||||||| |||||||||||    
T  18455712 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataa 18455769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 12201136 - 12201187
Alignment:
Q  1 attttgatttagcatagttctagttgaaattgggaattgggggttaggtttt 52  Q
    |||||| |||||||   |||||||||||||||||||||||||||||||||||    
T  12201136 attttggtttagcaagattctagttgaaattgggaattgggggttaggtttt 12201187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 119 - 214
Target Start/End: Complemental strand, 18570526 - 18570432
Alignment:
Q  119 attgtagaataaacatatgctgagtttcctatcaaatttggggtttgggtagatgaaaaattgggttttgggctgaaaactggtctgttcccgtag 214  Q
    ||||||||||||||||| | ||| |||||| |  |||||||| ||||||| | |||||| ||||||||| |||||||||| ||| | |||||||||    
T  18570526 attgtagaataaacataggttgaatttcctcttgaatttgggatttgggtggttgaaaa-ttgggtttttggctgaaaacaggtttcttcccgtag 18570432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 235
Target Start/End: Original strand, 29052336 - 29052462
Alignment:
Q  102 taagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggtagatgaaaaattggg--ttttgggctgaaaact 199  Q
    ||||||| || ||||||  ||||||||||||||| | ||||||||||||||||       ||||||| ||||  ||||||||  ||||||  ||||||||    
T  29052336 taagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaa-------tttgggttgatg--aaattgggacttttggagtgaaaact 29052426  T
Q  200 ggtctgttcccgtagggttgttcatcgcaactcgcc 235  Q
    |||||||||||||||  |||| | ||||||||||||    
T  29052427 ggtctgttcccgtagatttgtccgtcgcaactcgcc 29052462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 73 - 130
Target Start/End: Complemental strand, 23556272 - 23556215
Alignment:
Q  73 gaaaagtgtagaaatcatgacaattgtgttaagaatcgatgttcagattgtagaataa 130  Q
    |||||||||||||| ||||||||| |||||| |||| |||||| || |||||||||||    
T  23556272 gaaaagtgtagaaaccatgacaatcgtgttatgaattgatgttaaggttgtagaataa 23556215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 198
Target Start/End: Original strand, 8930933 - 8931017
Alignment:
Q  114 ttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggtagatgaaaaattgggttttgggctgaaaac 198  Q
    ||||||||||| |||||||||| | |||||||| | |  |||||| | ||||||| | |||||||||| ||||| ||||||||||    
T  8930933 ttcagattgtataataaacataggttgagtttctttttgaatttgagatttgggtggttgaaaaattgagtttttggctgaaaac 8931017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 119 - 198
Target Start/End: Original strand, 36300812 - 36300890
Alignment:
Q  119 attgtagaataaacatatgctgagtttcctatcaaatttggggtttgggtagatgaaaaattgggttttgggctgaaaac 198  Q
    ||||||||||||||||| | |||||||||| |  ||||| || ||||||| |||  ||||||||||||| ||||||||||    
T  36300812 attgtagaataaacataggttgagtttccttttgaatttaggatttgggt-gattgaaaattgggtttttggctgaaaac 36300890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 176
Target Start/End: Complemental strand, 37539334 - 37539272
Alignment:
Q  114 ttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggtagatgaaa 176  Q
    ||||| ||||||||||| | || | | |||||||||||||||||||  |||||||||||||||    
T  37539334 ttcaggttgtagaataatcttaggttaagtttcctatcaaatttggaatttgggtagatgaaa 37539272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 198
Target Start/End: Complemental strand, 38295490 - 38295405
Alignment:
Q  112 tgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggtagatgaaaaattgggttttgggctgaaaac 198  Q
    |||||||  |||||||||| |||| |  |||||||||||  |||||||| ||||||| | || ||||||||||||| ||||||||||    
T  38295490 tgttcaggatgtagaataatcataggtagagtttcctattgaatttgggatttgggtggttg-aaaattgggtttttggctgaaaac 38295405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 176
Target Start/End: Original strand, 47975055 - 47975119
Alignment:
Q  112 tgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggtagatgaaa 176  Q
    ||||||| ||||||||||| ||||   | ||||| |||||||||||||  |||||||||||||||    
T  47975055 tgttcaggttgtagaataatcatagattaagttttctatcaaatttggaatttgggtagatgaaa 47975119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 221; Significance: 1e-122; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 28288559 - 28288818
Alignment:
Q  1 attttgatttagcatagttctagttgaaattgggaattgggggttaggtttttggagtattattcttggattgaaaagtgtagaaatcatgacaattgtg 100  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||    
T  28288559 attttggtttagcatagttctagttgaaattgggaattgggggttaggtttt-ggagtatgattcttggattgaaaagtgtagaaatcatgacaattgtg 28288657  T
Q  101 ttaagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggtagatgaaaaattgggttttgggctgaaaactg 200  Q
    ||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||    
T  28288658 ttaagaatcgatgttcagattgtagaataaacataggttgagtttcctatcaaatttggggtttgggtggatgaaaaattgggtttttggctgaaaactg 28288757  T
Q  201 gtctgttcccgtagggttgttcatcgcaactcgccacggcgagtaaacttactcgcctcgc 261  Q
    |||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  28288758 gtctgttcccgtagggttgttcgtcgcaactcgccacagcgagtaaacttactcgcctcgc 28288818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 12943130 - 12942870
Alignment:
Q  1 attttgatttagcatagttctagttgaaattgggaattgggggttaggtttttggagtattattcttggattgaaaagtgtagaaatcatgacaattgtg 100  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||  ||| ||||||||    
T  12943130 attttggtttagcatagttctagttgaaattgggaattgggggttaggtttttggagtatgattcttggattgaaaagtgtagaaacgatggcaattgtg 12943031  T
Q  101 ttaagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggtagatgaaaaattgggttttgggctgaaaactg 200  Q
    ||||||||||||||||||||||||||||||| ||| | |||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||    
T  12943030 ttaagaatcgatgttcagattgtagaataaatataggttgagtttcctatcaaatttggggtttgggtggatgaaaaattgggtttttggctgaaaactg 12942931  T
Q  201 gtctgttcccgtagggttgttcatcgcaactcgccacggcgagtaaacttactcgcctcgc 261  Q
    |||||||||||||||||||||| |||||||||||||| | |||||||||||||||||||||    
T  12942930 gtctgttcccgtagggttgttcgtcgcaactcgccacagtgagtaaacttactcgcctcgc 12942870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 70 - 261
Target Start/End: Complemental strand, 23956794 - 23956603
Alignment:
Q  70 attgaaaagtgtagaaatcatgacaattgtgttaagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggta 169  Q
    ||||||||||||||||| |||   ||||||||||||||| ||||||||| ||||||||||| |||| | | ||||||||||||||||||||||||||||     
T  23956794 attgaaaagtgtagaaaccatcgaaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttggggtttgggtg 23956695  T
Q  170 gatgaaaaattgggttttgggctgaaaactggtctgttcccgtagggttgttcatcgcaactcgccacggcgagtaaacttactcgcctcgc 261  Q
    |||||||||||||||||| ||||| |||||||||||||||||||| |||||   |||||||||||||| |||||||||||||||||||||||    
T  23956694 gatgaaaaattgggtttttggctggaaactggtctgttcccgtagagttgtctgtcgcaactcgccacagcgagtaaacttactcgcctcgc 23956603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 70 - 259
Target Start/End: Complemental strand, 13765278 - 13765089
Alignment:
Q  70 attgaaaagtgtagaaatcatgacaattgtgttaagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggta 169  Q
    ||||||||||||||||| |||   ||||||||||||||| ||||||||| ||||||||||| |||| | | ||||||||||||||||||||||||||||     
T  13765278 attgaaaagtgtagaaaccatcgaaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttggggtttgggtg 13765179  T
Q  170 gatgaaaaattgggttttgggctgaaaactggtctgttcccgtagggttgttcatcgcaactcgccacggcgagtaaacttactcgcctc 259  Q
    ||||||||||| |||||| ||||| |||||||||||||||| ||| ||| |   |||||||||||||| ||||||||||| |||||||||    
T  13765178 gatgaaaaattaggtttttggctggaaactggtctgttcccatagagttttctgtcgcaactcgccacagcgagtaaactcactcgcctc 13765089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 70 - 235
Target Start/End: Original strand, 31021842 - 31022004
Alignment:
Q  70 attgaaaagtgtagaaatcatgacaattgtgttaagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggta 169  Q
    |||||||||||||||||  ||   ||||||||||||||| ||||||||| ||||||||||| |||| | | |||||||||||||||||||||||||||||    
T  31021842 attgaaaagtgtagaaactatcgaaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttggggtttgggta 31021941  T
Q  170 gatgaaaaattgggttttgggctgaaaactggtctgttcccgtagggttgttcatcgcaactcgcc 235  Q
    |||||||| ||| ||||| |||||    ||||||||||||||||| |||||   ||||||||||||    
T  31021942 gatgaaaatttgagtttttggctg---gctggtctgttcccgtagagttgtctgtcgcaactcgcc 31022004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 141 - 261
Target Start/End: Original strand, 19825680 - 19825800
Alignment:
Q  141 agtttcctatcaaatttggggtttgggtagatgaaaaattgggttttgggctgaaaactggtctgttcccgtagggttgttcatcgcaactcgccacggc 240  Q
    ||||||||||||||||||| |||| ||| |||||||||||||||||| |||||||||||||||||||||||||  |||||    ||||||||||||| ||    
T  19825680 agtttcctatcaaatttggagtttaggtggatgaaaaattgggtttttggctgaaaactggtctgttcccgtatagttgtctgccgcaactcgccacagc 19825779  T
Q  241 gagtaaacttactcgcctcgc 261  Q
    || ||||||||||||||||||    
T  19825780 gattaaacttactcgcctcgc 19825800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 102 - 261
Target Start/End: Original strand, 15891723 - 15891882
Alignment:
Q  102 taagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggtagatgaaaaattgggttttgggctgaaaactgg 201  Q
    ||||||| || ||||||  |||| |||||||||| | |||||||||||||||||||||| ||||||| |||||||    || ||||||  ||||||||||    
T  15891723 taagaattgaagttcaggctgtaaaataaacataggttgagtttcctatcaaatttgggatttgggttgatgaaattggggcttttggagtgaaaactgg 15891822  T
Q  202 tctgttcccgtagggttgttcatcgcaactcgccacggcgagtaaacttactcgcctcgc 261  Q
    |||||||||||||  |||| | |||||||||||||| ||||||| |||||||||||||||    
T  15891823 tctgttcccgtagatttgtccgtcgcaactcgccacagcgagtacacttactcgcctcgc 15891882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 102 - 261
Target Start/End: Original strand, 15900808 - 15900967
Alignment:
Q  102 taagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggtagatgaaaaattgggttttgggctgaaaactgg 201  Q
    ||||||| || ||||||  |||| |||||||||| | |||||||||||||||||||||| ||||||| |||||||    || ||||||  ||||||||||    
T  15900808 taagaattgaagttcaggctgtaaaataaacataggttgagtttcctatcaaatttgggatttgggttgatgaaattggggcttttggagtgaaaactgg 15900907  T
Q  202 tctgttcccgtagggttgttcatcgcaactcgccacggcgagtaaacttactcgcctcgc 261  Q
    |||||||||||||  |||| | |||||||||||||| ||||||| |||||||||||||||    
T  15900908 tctgttcccgtagatttgtccgtcgcaactcgccacagcgagtacacttactcgcctcgc 15900967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 70 - 261
Target Start/End: Complemental strand, 23415836 - 23415645
Alignment:
Q  70 attgaaaagtgtagaaatcatgacaattgtgttaagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggta 169  Q
    ||||||||| ||||||| |||   ||||||||||||||| || ||||||  ||||||||||||||| | |||||||||||||||||||||| |||||||     
T  23415836 attgaaaagcgtagaaaccatcgaaattgtgttaagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttgggatttgggtt 23415737  T
Q  170 gatgaaaaattgggttttgggctgaaaactggtctgttcccgtagggttgttcatcgcaactcgccacggcgagtaaacttactcgcctcgc 261  Q
    |||||||    || ||||||  ||| |||||||||||||||||||  || | | |||||| ||||||  ||||||| |||||||||||||||    
T  23415736 gatgaaattggggcttttggagtgacaactggtctgttcccgtagatttttccgtcgcaattcgccatagcgagtacacttactcgcctcgc 23415645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 70 - 261
Target Start/End: Complemental strand, 27557594 - 27557403
Alignment:
Q  70 attgaaaagtgtagaaatcatgacaattgtgttaagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggta 169  Q
    ||||||||||||||||| ||    ||||||||||| ||| || |||||| |||||||||||||||| | ||||||| |||||||||||||| |||| ||     
T  27557594 attgaaaagtgtagaaaccaacgaaattgtgttaataattgaagttcaggttgtagaataaacataggttgagttttctatcaaatttgggatttgagtc 27557495  T
Q  170 gatgaaaaattgggttttgggctgaaaactggtctgttcccgtagggttgttcatcgcaactcgccacggcgagtaaacttactcgcctcgc 261  Q
    |||||||    || ||||||  |||||| ||||||||||||||||  |||| | |||||||||||||| ||||||| ||||| |||||||||    
T  27557494 gatgaaattggggcttttggagtgaaaattggtctgttcccgtagatttgtccgtcgcaactcgccacagcgagtacacttaatcgcctcgc 27557403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 155 - 261
Target Start/End: Complemental strand, 25807979 - 25807873
Alignment:
Q  155 tttggggtttgggtagatgaaaaattgggttttgggctgaaaactggtctgttcccgtagggttgttcatcgcaactcgccacggcgagtaaacttactc 254  Q
    |||||||||||||| ||||||||||||||||||  |||| |||||||||||||||||||| |||||   |||||||||||||| ||||||||||||||||    
T  25807979 tttggggtttgggtggatgaaaaattgggtttttagctggaaactggtctgttcccgtagagttgtctgtcgcaactcgccacagcgagtaaacttactc 25807880  T
Q  255 gcctcgc 261  Q
    |||||||    
T  25807879 gcctcgc 25807873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 102 - 261
Target Start/End: Original strand, 15173607 - 15173766
Alignment:
Q  102 taagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggtagatgaaaaattgggttttgggctgaaaactgg 201  Q
    ||||||| || ||||||  ||||| ||||||||| | |||||||||||||||||||||| ||||| | |||||||    || ||||||  |||||||| |    
T  15173607 taagaattgaagttcagcctgtaggataaacataggttgagtttcctatcaaatttgggatttggattgatgaaattggggcttttggagtgaaaactag 15173706  T
Q  202 tctgttcccgtagggttgttcatcgcaactcgccacggcgagtaaacttactcgcctcgc 261  Q
    |||||||||||||  |||| | |||||||||||||| ||||||||||| |||||||||||    
T  15173707 tctgttcccgtagatttgtccgtcgcaactcgccacagcgagtaaactaactcgcctcgc 15173766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 70 - 158
Target Start/End: Original strand, 23225978 - 23226066
Alignment:
Q  70 attgaaaagtgtagaaatcatgacaattgtgttaagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttg 158  Q
    ||||||||||||||||| |||   ||||||||||||||| ||||||||| ||||||||||| |||| | | ||||||||||||||||||    
T  23225978 attgaaaagtgtagaaaccatcgaaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttg 23226066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 73 - 160
Target Start/End: Complemental strand, 611728 - 611641
Alignment:
Q  73 gaaaagtgtagaaatcatgacaattgtgttaagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggg 160  Q
    |||||||||||||| |||||||||||||||| ||||  |||||||| | ||||||||| |||| | | ||||||||| ||||||||||    
T  611728 gaaaagtgtagaaaccatgacaattgtgttaggaattaatgttcaggtggtagaataatcataggttaagtttcctaacaaatttggg 611641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 73 - 160
Target Start/End: Original strand, 20556156 - 20556243
Alignment:
Q  73 gaaaagtgtagaaatcatgacaattgtgttaagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggg 160  Q
    |||||||||||||| ||||  ||||||||||||||| ||||||||| ||||||||||| |||| | | ||||| ||| ||||||||||    
T  20556156 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagttttctaacaaatttggg 20556243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 75 - 158
Target Start/End: Original strand, 25619023 - 25619106
Alignment:
Q  75 aaagtgtagaaatcatgacaattgtgttaagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttg 158  Q
    |||||||||||| ||||  ||||||||||||||| ||||||||| ||||||||||| |||| | | ||||||||| ||||||||    
T  25619023 aaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtttcctaacaaatttg 25619106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 73 - 135
Target Start/End: Original strand, 14978665 - 14978727
Alignment:
Q  73 gaaaagtgtagaaatcatgacaattgtgttaagaatcgatgttcagattgtagaataaacata 135  Q
    |||||||||||||| ||||  ||||||||||||||| ||||||||| ||||||||||| ||||    
T  14978665 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcata 14978727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 113 - 198
Target Start/End: Complemental strand, 10446099 - 10446015
Alignment:
Q  113 gttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggtagatgaaaaattgggttttgggctgaaaac 198  Q
    ||||||||| ||||||||||||| | |||||||||| |  |||||||| ||||||| | || ||||||||||||| ||||||||||    
T  10446099 gttcagattatagaataaacataggttgagtttccttttgaatttgggatttgggtggttg-aaaattgggtttttggctgaaaac 10446015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 110 - 214
Target Start/End: Complemental strand, 29045154 - 29045050
Alignment:
Q  110 gatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggtagatgaaaaattgggttttgggctgaaaactggtctgttcc 209  Q
    ||||||||| ||||||||||| |||| |  |||||| |||||||||||||| |||| || |||||||    || | ||||  ||||||||||||||||||    
T  29045154 gatgttcaggttgtagaataatcataggtagagttttctatcaaatttgggatttgagttgatgaaattggggctattggagtgaaaactggtctgttcc 29045055  T
Q  210 cgtag 214  Q
    |||||    
T  29045054 cgtag 29045050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 9185048 - 9185150
Alignment:
Q  1 attttgatttagcatagttctagttgaaattgggaa-ttgggggttaggtttttggagtattattcttggattgaaaagtgtagaaatcatgacaattgt 99  Q
    |||||| |||||||  ||||||||||||||| |||| || | ||||||||||| ||||||| ||| ||| ||| ||||||||||||  ||||||| | ||    
T  9185048 attttggtttagcaaggttctagttgaaattaggaaattagaggttaggtttt-ggagtatgatttttgaattaaaaagtgtagaatccatgacattagt 9185146  T
Q  100 gtta 103  Q
    ||||    
T  9185147 gtta 9185150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 187
Target Start/End: Complemental strand, 1818839 - 1818766
Alignment:
Q  113 gttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggtagatgaaaaattgggtttt 187  Q
    ||||||||||||||||||||||| | |||||||||| |  |||||||  ||||||| | || |||||||||||||    
T  1818839 gttcagattgtagaataaacataggttgagtttccttttgaatttggaatttgggtggttg-aaaattgggtttt 1818766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 52
Target Start/End: Complemental strand, 18138546 - 18138497
Alignment:
Q  2 ttttgatttagcatagttctagttgaaattgggaattgggggttaggtttt 52  Q
    ||||| ||||||||||||| ||||||||||| ||||| |||||||||||||    
T  18138546 ttttggtttagcatagttccagttgaaattgagaatt-ggggttaggtttt 18138497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 176
Target Start/End: Complemental strand, 35057430 - 35057368
Alignment:
Q  114 ttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggtagatgaaa 176  Q
    ||||| ||||||||||| | || | | ||||| |||||||||||||| |||||||||||||||    
T  35057430 ttcaggttgtagaataatcttaagttaagttttctatcaaatttgggatttgggtagatgaaa 35057368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 182; Significance: 2e-98; HSPs: 21)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 28 - 261
Target Start/End: Complemental strand, 297329 - 297096
Alignment:
Q  28 aattgggaattgggggttaggtttttggagtattattcttggattgaaaagtgtagaaatcatgacaattgtgttaagaatcgatgttcagattgtagaa 127  Q
    ||||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||||| |||| |||||||||||||||||||||||||| ||||||||    
T  297329 aattgggaattgggggttaggttttgggagtatgattcttgaattgaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcaggttgtagaa 297230  T
Q  128 taaacatatgctgagtttcctatcaaatttggggtttgggtagatgaaaaattgggttttgggctgaaaactggtctgttcccgtagggttgttcatcgc 227  Q
    |||||||| | |||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| ||||||| ||||    
T  297229 taaacataggttgagtttcctatcaaatttggggtttgggtggatgaaaaattgggtttttggctgaaaactggtctgttcccgtagagttgttcgtcgc 297130  T
Q  228 aactcgccacggcgagtaaacttactcgcctcgc 261  Q
    |||||||||| |||||||||||||||||||||||    
T  297129 aactcgccacagcgagtaaacttactcgcctcgc 297096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 70 - 261
Target Start/End: Complemental strand, 28313280 - 28313089
Alignment:
Q  70 attgaaaagtgtagaaatcatgacaattgtgttaagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggta 169  Q
    ||||||||||||| ||| |||   ||||||||||||||| ||||||||| |||| |||||| |||| | | |||||||||||||||||| |||||||||     
T  28313280 attgaaaagtgtaaaaaccatcgaaattgtgttaagaattgatgttcaggttgtggaataatcataggttaagtttcctatcaaatttgaggtttgggtg 28313181  T
Q  170 gatgaaaaattgggttttgggctgaaaactggtctgttcccgtagggttgttcatcgcaactcgccacggcgagtaaacttactcgcctcgc 261  Q
    |||||||||||  ||||| ||||  |||||||||||||||||||| |||||   | |||||||||||| |||||||||||||||||||||||    
T  28313180 gatgaaaaattacgtttttggctagaaactggtctgttcccgtagagttgtctgttgcaactcgccacagcgagtaaacttactcgcctcgc 28313089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 102 - 261
Target Start/End: Original strand, 29763786 - 29763945
Alignment:
Q  102 taagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggtagatgaaaaattgggttttgggctgaaaactgg 201  Q
    ||||||| || ||| ||| ||||||||||||||| | |||||||||||||||||||||| ||||||| |||||||    || ||||||  ||||||||||    
T  29763786 taagaattgaagtttagactgtagaataaacataagttgagtttcctatcaaatttgggatttgggtggatgaaattggggcttttggagtgaaaactgg 29763885  T
Q  202 tctgttcccgtagggttgttcatcgcaactcgccacggcgagtaaacttactcgcctcgc 261  Q
    |||||||||||||  |||| | |||||||||||||| |||||||||||||||||||||||    
T  29763886 tctgttcccgtagatttgtccgtcgcaactcgccacagcgagtaaacttactcgcctcgc 29763945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 141 - 261
Target Start/End: Original strand, 8276183 - 8276303
Alignment:
Q  141 agtttcctatcaaatttggggtttgggtagatgaaaaattgggttttgggctgaaaactggtctgttcccgtagggttgttcatcgcaactcgccacggc 240  Q
    ||||||||||||||||||| |||| ||| |||||||||||||||||| |||||||||||||||||||||||||| |||||   ||||||||||||||       
T  8276183 agtttcctatcaaatttggagttttggtggatgaaaaattgggtttttggctgaaaactggtctgttcccgtagagttgtctctcgcaactcgccacaat 8276282  T
Q  241 gagtaaacttactcgcctcgc 261  Q
    || ||||||||||||||||||    
T  8276283 gattaaacttactcgcctcgc 8276303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 102 - 261
Target Start/End: Complemental strand, 50001374 - 50001215
Alignment:
Q  102 taagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggtagatgaaaaattgggttttgggctgaaaactgg 201  Q
    ||||||| || ||||||  ||||||||||||||||| ||||||||||||||||||| || ||||||| |||||||    || ||||||  ||||||||||    
T  50001374 taagaattgaagttcaggctgtagaataaacatatgttgagtttcctatcaaattttggatttgggttgatgaaattggggcttttggagtgaaaactgg 50001275  T
Q  202 tctgttcccgtagggttgttcatcgcaactcgccacggcgagtaaacttactcgcctcgc 261  Q
    | |||||||||||  ||||   ||||||||||||||  ||||||||||||||||||||||    
T  50001274 tatgttcccgtagatttgtctgtcgcaactcgccacaacgagtaaacttactcgcctcgc 50001215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 70 - 176
Target Start/End: Original strand, 22130146 - 22130252
Alignment:
Q  70 attgaaaagtgtagaaatcatgacaattgtgttaagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggta 169  Q
    ||||||||||||||||| ||| | ||||||||||||||| |||||| || ||||||||||| |||| | | |||||||||||||||||||| ||||||||    
T  22130146 attgaaaagtgtagaaaccatcaaaattgtgttaagaattgatgttaaggttgtagaataatcataggttaagtttcctatcaaatttgggatttgggta 22130245  T
Q  170 gatgaaa 176  Q
    |||||||    
T  22130246 gatgaaa 22130252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 141 - 220
Target Start/End: Original strand, 38056866 - 38056944
Alignment:
Q  141 agtttcctatcaaatttggggtttgggtagatgaaaaattgggttttgggctgaaaactggtctgttcccgtagggttgt 220  Q
    |||||||||||||||||||||||||||| | |||||||||||||||| |||||||||||||||||||||||||| |||||    
T  38056866 agtttcctatcaaatttggggtttgggtgg-tgaaaaattgggtttttggctgaaaactggtctgttcccgtagagttgt 38056944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 102 - 235
Target Start/End: Original strand, 46197899 - 46198032
Alignment:
Q  102 taagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggtagatgaaaaattgggttttgggctgaaaactgg 201  Q
    ||||||| || ||||||  ||||||||||||||| | |||||||||||||||||||||| ||||||| |||||||    || ||||||  ||||||||||    
T  46197899 taagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttgggatttgggttgatgaaattggggcttttggagtgaaaactgg 46197998  T
Q  202 tctgttcccgtagggttgttcatcgcaactcgcc 235  Q
    | |||||||||||  |||| | ||||||||||||    
T  46197999 tatgttcccgtagatttgtccgtcgcaactcgcc 46198032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 70 - 160
Target Start/End: Original strand, 45574140 - 45574230
Alignment:
Q  70 attgaaaagtgtagaaatcatgacaattgtgttaagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggg 160  Q
    ||||||||||| ||||| |||   ||||||||||||||| ||||||||| ||||||||||| |||| | | ||||||||||||||||||||    
T  45574140 attgaaaagtgcagaaaccatcgaaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttggg 45574230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 73 - 158
Target Start/End: Original strand, 13880660 - 13880745
Alignment:
Q  73 gaaaagtgtagaaatcatgacaattgtgttaagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttg 158  Q
    |||||||||||||| ||||  ||||||||||||||| ||||||||| ||||||||||| |||| | | ||||||||| ||||||||    
T  13880660 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtttcctaacaaatttg 13880745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 104 - 176
Target Start/End: Original strand, 23194667 - 23194739
Alignment:
Q  104 agaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggtagatgaaa 176  Q
    ||||| ||||||||| ||||||||||| |||| | | ||||||||||||||||||| ||||||||||||||||    
T  23194667 agaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttggagtttgggtagatgaaa 23194739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 112 - 197
Target Start/End: Complemental strand, 8306492 - 8306407
Alignment:
Q  112 tgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggtagatgaaaaattgggttttgggctgaaaa 197  Q
    |||||||||||| |||||| |||| | | |||||||||||||||||||| |||||||||||||||  |||| |||| || ||||||    
T  8306492 tgttcagattgttgaataatcataggttaagtttcctatcaaatttgggatttgggtagatgaaattttggttttttgggtgaaaa 8306407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 112 - 219
Target Start/End: Original strand, 17901966 - 17902074
Alignment:
Q  112 tgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggtagatgaaaaattggg---ttttgggctgaaaactggtctgttc 208  Q
    ||||||| ||||||||||| |||| |  |||||| |||||||||||||| ||||||| ||||  ||||||||   ||||||  |||||||||||||||||    
T  17901966 tgttcaggttgtagaataatcataggtagagttttctatcaaatttgggatttgggttgatg--aaattggggctttttggagtgaaaactggtctgttc 17902063  T
Q  209 ccgtagggttg 219  Q
    |||||| ||||    
T  17902064 ccgtagagttg 17902074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 112 - 176
Target Start/End: Original strand, 24723624 - 24723688
Alignment:
Q  112 tgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggtagatgaaa 176  Q
    ||||||| ||||||||||| |||| | | |||||||||||||||||||| |||||||| ||||||    
T  24723624 tgttcaggttgtagaataatcataggttaagtttcctatcaaatttgggatttgggtaaatgaaa 24723688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 119 - 214
Target Start/End: Complemental strand, 34392646 - 34392552
Alignment:
Q  119 attgtagaataaacatatgctgagtttcctatcaaatttggggtttgggtagatgaaaaattgggttttgggctgaaaactggtctgttcccgtag 214  Q
    ||||||||||||||||| | |||||||||| |  |||||||| ||||||| | |  ||||||||||||| |||||||||| ||| | |||||||||    
T  34392646 attgtagaataaacataggttgagtttccttttgaatttgggatttgggt-gcttgaaaattgggtttttggctgaaaacaggtttcttcccgtag 34392552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 112 - 176
Target Start/End: Original strand, 7052177 - 7052241
Alignment:
Q  112 tgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggtagatgaaa 176  Q
    ||||||| ||||| ||||| |||| | | |||||||||||| ||||||| |||||||||||||||    
T  7052177 tgttcaggttgtaaaataatcataggttaagtttcctatcatatttgggatttgggtagatgaaa 7052241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 21526832 - 21526884
Alignment:
Q  1 attttgatttagca-tagttctagttgaaattgggaattgggggttaggtttt 52  Q
    |||||| ||||||| | |||||||||||||||| |||||||||||||||||||    
T  21526832 attttggtttagcaatggttctagttgaaattgagaattgggggttaggtttt 21526884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 112 - 177
Target Start/End: Original strand, 21239207 - 21239272
Alignment:
Q  112 tgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggtagatgaaaa 177  Q
    ||||||| ||||||||||| |||| |  |||||| ||||||||||| || ||||||| ||||||||    
T  21239207 tgttcagtttgtagaataatcataggtagagttttctatcaaatttaggatttgggttgatgaaaa 21239272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 176
Target Start/End: Complemental strand, 6834054 - 6833990
Alignment:
Q  112 tgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggtagatgaaa 176  Q
    ||||||| ||||||||||| |||| |  |||||| |||||||||||||| ||| ||| |||||||    
T  6834054 tgttcaggttgtagaataatcataggtagagttttctatcaaatttgggattttggttgatgaaa 6833990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 110 - 170
Target Start/End: Original strand, 21188195 - 21188255
Alignment:
Q  110 gatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggtag 170  Q
    ||||||||| |||||||||||  |||||    ||||||||||||||||||| |||||||||    
T  21188195 gatgttcaggttgtagaataagaatatgtaatgtttcctatcaaatttgggatttgggtag 21188255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 24476323 - 24476279
Alignment:
Q  8 tttagcatagttctagttgaaattgggaattgggggttaggtttt 52  Q
    ||||||||||||||||| ||||||||||||| ||| |||| ||||    
T  24476323 tttagcatagttctagtagaaattgggaatttgggtttagatttt 24476279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0422 (Bit Score: 140; Significance: 2e-73; HSPs: 1)
Name: scaffold0422
Description:

Target: scaffold0422; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 70 - 261
Target Start/End: Complemental strand, 3895 - 3704
Alignment:
Q  70 attgaaaagtgtagaaatcatgacaattgtgttaagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggta 169  Q
    ||||||||||||||||| |||   ||||||||||||||||||||||||| |||| ||||||||||| | ||||||||||||||||||||||||||||||     
T  3895 attgaaaagtgtagaaaccatcgaaattgtgttaagaatcgatgttcaggttgttgaataaacataggttgagtttcctatcaaatttggggtttgggtg 3796  T
Q  170 gatgaaaaattgggttttgggctgaaaactggtctgttcccgtagggttgttcatcgcaactcgccacggcgagtaaacttactcgcctcgc 261  Q
    |||||||||||||||||| |||||||||||||||||||||||||| ||||||| |||||||||||||| |||||||||||||||||||||||    
T  3795 gatgaaaaattgggttttcggctgaaaactggtctgttcccgtagagttgttcgtcgcaactcgccacagcgagtaaacttactcgcctcgc 3704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0453 (Bit Score: 128; Significance: 3e-66; HSPs: 1)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 70 - 261
Target Start/End: Original strand, 7131 - 7322
Alignment:
Q  70 attgaaaagtgtagaaatcatgacaattgtgttaagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggta 169  Q
    ||||||||||||||||| |||   |||||||||||||||||||||||||  ||||||||||||||| | ||||||||||||||||||||||||||||||     
T  7131 attgaaaagtgtagaaaccatcgaaattgtgttaagaatcgatgttcaggctgtagaataaacataggttgagtttcctatcaaatttggggtttgggtg 7230  T
Q  170 gatgaaaaattgggttttgggctgaaaactggtctgttcccgtagggttgttcatcgcaactcgccacggcgagtaaacttactcgcctcgc 261  Q
    |||||||||||||||||| |||||||||||||||||||||||||| ||||||| ||||||| | ||||  ||||||||||||||||||||||    
T  7231 gatgaaaaattgggtttttggctgaaaactggtctgttcccgtagagttgttcgtcgcaacacaccacatcgagtaaacttactcgcctcgc 7322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 120; Significance: 2e-61; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 70 - 261
Target Start/End: Original strand, 8413869 - 8414060
Alignment:
Q  70 attgaaaagtgtagaaatcatgacaattgtgttaagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggta 169  Q
    ||||||||||||||||| |||   ||||||||||||||| ||||||||| ||||||||||| |||| | | ||||||||||||||||||||||||||||     
T  8413869 attgaaaagtgtagaaaccatcgaaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttggggtttgggtg 8413968  T
Q  170 gatgaaaaattgggttttgggctgaaaactggtctgttcccgtagggttgttcatcgcaactcgccacggcgagtaaacttactcgcctcgc 261  Q
    |||||||||||||||||| ||||| |||||||||||||||||||| |||||   |||||||||||||| |||||||||||||||||||||||    
T  8413969 gatgaaaaattgggtttttggctggaaactggtctgttcccgtagagttgtctgtcgcaactcgccacagcgagtaaacttactcgcctcgc 8414060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 70 - 261
Target Start/End: Complemental strand, 11775645 - 11775463
Alignment:
Q  70 attgaaaagtgtagaaatcatgacaattgtgttaagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggta 169  Q
    ||||||||||||||||| |||   ||||||||||||||| ||||||||         |||| |||| | | ||||||||||||||||||||||||||||     
T  11775645 attgaaaagtgtagaaaccatcgaaattgtgttaagaattgatgttca---------ataatcataggttaagtttcctatcaaatttggggtttgggtg 11775555  T
Q  170 gatgaaaaattgggttttgggctgaaaactggtctgttcccgtagggttgttcatcgcaactcgccacggcgagtaaacttactcgcctcgc 261  Q
    |||||||||||||||||| ||||| |||||||||||||||||||| |||||   |||||||||||||| |||||||||| ||||||||||||    
T  11775554 gatgaaaaattgggtttttggctggaaactggtctgttcccgtagagttgtctgtcgcaactcgccacagcgagtaaacgtactcgcctcgc 11775463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 70 - 243
Target Start/End: Complemental strand, 19882879 - 19882706
Alignment:
Q  70 attgaaaagtgtagaaatcatgacaattgtgttaagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggta 169  Q
    ||||||||||||||||| |||   ||||||||||| ||| ||||||||| ||||||||||| |||| | | ||||||||||||||||||||||||||||     
T  19882879 attgaaaagtgtagaaaccatcgaaattgtgttaaaaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttggggtttgggtg 19882780  T
Q  170 gatgaaaaattgggttttgggctgaaaactggtctgttcccgtagggttgttcatcgcaactcgccacggcgag 243  Q
    ||||||||||||| |||| ||||| ||||||||| |||||||||| |||||   | |||||||||||| |||||    
T  19882779 gatgaaaaattggctttttggctggaaactggtccgttcccgtagagttgtctgttgcaactcgccacagcgag 19882706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 70 - 261
Target Start/End: Original strand, 14397031 - 14397221
Alignment:
Q  70 attgaaaagtgtagaaatcatgacaattgtgttaagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggta 169  Q
    ||||||||||||||||| |||   ||||||||||||||| || ||||||  ||||||||||||||| | ||||||||||||||||||| || |||||||     
T  14397031 attgaaaagtgtagaaaccatcgaaattgtgttaagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaattt-ggatttgggtt 14397129  T
Q  170 gatgaaaaattgggttttgggctgaaaactggtctgttcccgtagggttgttcatcgcaactcgccacggcgagtaaacttactcgcctcgc 261  Q
    |||||||    || ||||||  |||||||||||||||||||||||  ||||   |||||||||||||| ||||||| |||||||||||||||    
T  14397130 gatgaaattggggcttttggagtgaaaactggtctgttcccgtagatttgtctgtcgcaactcgccacagcgagtacacttactcgcctcgc 14397221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 155 - 261
Target Start/End: Complemental strand, 17796079 - 17795973
Alignment:
Q  155 tttggggtttgggtagatgaaaaattgggttttgggctgaaaactggtctgttcccgtagggttgttcatcgcaactcgccacggcgagtaaacttactc 254  Q
    |||||||||||||| |||||||||||||||||| ||||| ||||||||||||| |||||| |||||   |||||||||||||| ||||||||||||||||    
T  17796079 tttggggtttgggtggatgaaaaattgggtttttggctggaaactggtctgtttccgtagagttgtatgtcgcaactcgccacagcgagtaaacttactc 17795980  T
Q  255 gcctcgc 261  Q
    |||||||    
T  17795979 gcctcgc 17795973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 102 - 261
Target Start/End: Complemental strand, 16198734 - 16198575
Alignment:
Q  102 taagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggtagatgaaaaattgggttttgggctgaaaactgg 201  Q
    ||||||| || ||||||  ||||||||||||||| | |||||||||||||||||||||| ||||||| |||||||    || ||||||  ||||||||||    
T  16198734 taagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttgggatttgggttgatgaaattggggcttttggagtgaaaactgg 16198635  T
Q  202 tctgttcccgtagggttgttcatcgcaactcgccacggcgagtaaacttactcgcctcgc 261  Q
    ||| |||||||||  |||| |  ||||||||||||| ||||||| |||||||||||||||    
T  16198634 tctattcccgtagatttgtccgccgcaactcgccacagcgagtacacttactcgcctcgc 16198575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 102 - 261
Target Start/End: Original strand, 25657668 - 25657827
Alignment:
Q  102 taagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggtagatgaaaaattgggttttgggctgaaaactgg 201  Q
    ||||||| |||||||||  ||||||||||||||| | |||||||||||||||||||||| ||||||| |||||||    || |||| |  |||||| |||    
T  25657668 taagaattgatgttcaggctgtagaataaacataggttgagtttcctatcaaatttgggatttgggttgatgaaattggggcttttagagtgaaaaatgg 25657767  T
Q  202 tctgttcccgtagggttgttcatcgcaactcgccacggcgagtaaacttactcgcctcgc 261  Q
    ||||||| ||||   |||| | |||||||||||||| |||||||||||||||||||||||    
T  25657768 tctgttctcgtaaatttgtccgtcgcaactcgccacagcgagtaaacttactcgcctcgc 25657827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 102 - 261
Target Start/End: Complemental strand, 23478980 - 23478821
Alignment:
Q  102 taagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggtagatgaaaaattgggttttgggctgaaaactgg 201  Q
    ||||||| || ||||||  ||||||||||||||| | ||||||||||||||||||| || ||||||| |||||||    || ||| ||  |||||| |||    
T  23478980 taagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttaggatttgggttgatgaaattggggctttaggagtgaaaaatgg 23478881  T
Q  202 tctgttcccgtagggttgttcatcgcaactcgccacggcgagtaaacttactcgcctcgc 261  Q
    |||||||||||||  |||| | ||||||||||| || |||||||||||||||||| ||||    
T  23478880 tctgttcccgtagatttgtccgtcgcaactcgctactgcgagtaaacttactcgcttcgc 23478821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 102 - 261
Target Start/End: Complemental strand, 19880721 - 19880569
Alignment:
Q  102 taagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggtagatgaaaaattgggttttgggctgaaaactgg 201  Q
    ||||||| || ||||||  ||||||||||||||| | |||||||||||||||||||||| |       |||||||    || ||||||  ||||||||||    
T  19880721 taagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttgggtt-------gatgaaattggggcttttggagtgaaaactgg 19880629  T
Q  202 tctgttcccgtagggttgttcatcgcaactcgccacggcgagtaaacttactcgcctcgc 261  Q
    |||||||||||||  |||| | |||||||||||||| |||||||||||| | ||||||||    
T  19880628 tctgttcccgtagatttgtccgtcgcaactcgccacagcgagtaaacttgcacgcctcgc 19880569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 70 - 160
Target Start/End: Original strand, 25483562 - 25483652
Alignment:
Q  70 attgaaaagtgtagaaatcatgacaattgtgttaagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggg 160  Q
    ||||||||||||||||| |||   ||||||||||||||| |||||| || ||||||||||| |||| | | ||||||||||||||||||||    
T  25483562 attgaaaagtgtagaaaccatcgaaattgtgttaagaattgatgtttaggttgtagaataatcataggttaagtttcctatcaaatttggg 25483652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 73 - 158
Target Start/End: Complemental strand, 23661225 - 23661140
Alignment:
Q  73 gaaaagtgtagaaatcatgacaattgtgttaagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttg 158  Q
    |||||||||||||| ||||  ||||||||||||||| ||||||||| ||||||||||| |||| | | ||||||||| ||||||||    
T  23661225 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtttcctaacaaatttg 23661140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 73 - 157
Target Start/End: Complemental strand, 20455915 - 20455831
Alignment:
Q  73 gaaaagtgtagaaatcatgacaattgtgttaagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaattt 157  Q
    |||||||||||||| ||||  ||||||||||||||| ||||||||| ||||||||||| |||| | | ||||||||| |||||||    
T  20455915 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtttcctaacaaattt 20455831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 121 - 261
Target Start/End: Complemental strand, 26454585 - 26454452
Alignment:
Q  121 tgtagaataaacatatgctgagtttcctatcaaatttggggtttgggtagatgaaaaattgggttttgggctgaaaactggtctgttcccgtagggttgt 220  Q
    ||||||||||||||| | |||||||||||||||||||||| |       |||||||    || ||||||  ||||| |||||||||||||||||  ||||    
T  26454585 tgtagaataaacataggttgagtttcctatcaaatttgggtt-------gatgaaattggggcttttggagtgaaatctggtctgttcccgtagatttgt 26454493  T
Q  221 tcatcgcaactcgccacggcgagtaaacttactcgcctcgc 261  Q
     | ||| |||||||||| |||||||||||| ||||||||||    
T  26454492 ccgtcgtaactcgccacagcgagtaaacttgctcgcctcgc 26454452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 73 - 158
Target Start/End: Original strand, 17460331 - 17460416
Alignment:
Q  73 gaaaagtgtagaaatcatgacaattgtgttaagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttg 158  Q
    |||||||||||||| ||||  ||||||||||||||| ||||||||| ||||||||||| |||| | | ||||||| | ||||||||    
T  17460331 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtttccaaacaaatttg 17460416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 73 - 154
Target Start/End: Complemental strand, 20463123 - 20463042
Alignment:
Q  73 gaaaagtgtagaaatcatgacaattgtgttaagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaa 154  Q
    |||||||||||||| ||||  ||||||||||||||| ||||||||| ||||||||||| |||| | | ||||||||| ||||    
T  20463123 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtttcctaacaaa 20463042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 113 - 214
Target Start/End: Original strand, 22610431 - 22610531
Alignment:
Q  113 gttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggtagatgaaaaattgggttttgggctgaaaactggtctgttcccgt 212  Q
    ||||||||||||||||||||||| | |||||||||| |  ||||| || ||||||| | || ||||||||||||| |||||||||| ||| | |||||||    
T  22610431 gttcagattgtagaataaacataggttgagtttccttttgaattttggatttgggtggttg-aaaattgggtttttggctgaaaacaggtttcttcccgt 22610529  T
Q  213 ag 214  Q
    ||    
T  22610530 ag 22610531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 78 - 157
Target Start/End: Complemental strand, 20460888 - 20460809
Alignment:
Q  78 gtgtagaaatcatgacaattgtgttaagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaattt 157  Q
    ||||||||| ||||  ||||||||||||||| ||||||||| ||||||||||| |||| | | ||||||||| |||||||    
T  20460888 gtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtttcctaacaaattt 20460809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 78 - 157
Target Start/End: Complemental strand, 20455174 - 20455095
Alignment:
Q  78 gtgtagaaatcatgacaattgtgttaagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaattt 157  Q
    ||||||||| ||||  ||||||||||||||| ||||||||| ||||||||||| |||| | | ||| ||||| |||||||    
T  20455174 gtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtgtcctaacaaattt 20455095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 52
Target Start/End: Complemental strand, 22617619 - 22617584
Alignment:
Q  17 gttctagttgaaattgggaattgggggttaggtttt 52  Q
    ||||||||||||||||||||||||||||||||||||    
T  22617619 gttctagttgaaattgggaattgggggttaggtttt 22617584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 113 - 176
Target Start/End: Original strand, 36732649 - 36732712
Alignment:
Q  113 gttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggtagatgaaa 176  Q
    |||||||||||||||||| |||| |   |||||||||||||||||||| |||||||||| ||||    
T  36732649 gttcagattgtagaataatcataggtcaagtttcctatcaaatttgggatttgggtagacgaaa 36732712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 102 - 160
Target Start/End: Complemental strand, 22483678 - 22483620
Alignment:
Q  102 taagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggg 160  Q
    ||||||| ||||||||| |||||||||||||||| | ||||||||||||  ||||||||    
T  22483678 taagaattgatgttcaggttgtagaataaacataggttgagtttcctattgaatttggg 22483620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 197
Target Start/End: Complemental strand, 23884056 - 23883973
Alignment:
Q  113 gttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggtagatgaaaaattgggttttgggctgaaaa 197  Q
    ||||||||||||||||||||||| | |||||||||| |  |||||| | ||||||| | ||  |||||||||||| |||||||||    
T  23884056 gttcagattgtagaataaacataggttgagtttccttttgaatttgcgatttgggtggttg-caaattgggtttttggctgaaaa 23883973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 108; Significance: 3e-54; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 70 - 261
Target Start/End: Complemental strand, 169371 - 169180
Alignment:
Q  70 attgaaaagtgtagaaatcatgacaattgtgttaagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggta 169  Q
    ||||||||||||||||| |||   ||||||||||||||| || |||||| ||||||||||| |||| | | ||||||||||||||||||||||||||||     
T  169371 attgaaaagtgtagaaaccatcgaaattgtgttaagaattgaagttcaggttgtagaataatcataggttaagtttcctatcaaatttggggtttgggtg 169272  T
Q  170 gatgaaaaattgggttttgggctgaaaactggtctgttcccgtagggttgttcatcgcaactcgccacggcgagtaaacttactcgcctcgc 261  Q
    |||||||||||||||||| ||||| |||||||||||||||||||| |||||   |||||||||||||| || |||||| |||||||||||||    
T  169271 gatgaaaaattgggtttttggctggaaactggtctgttcccgtagagttgtctgtcgcaactcgccacagcaagtaaatttactcgcctcgc 169180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 70 - 261
Target Start/End: Complemental strand, 176724 - 176533
Alignment:
Q  70 attgaaaagtgtagaaatcatgacaattgtgttaagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggta 169  Q
    ||||||||||||||||| |||   ||||||||||||||| || |||||| ||||||||||| |||| | | ||||||||||||||||||||||||||||     
T  176724 attgaaaagtgtagaaaccatcgaaattgtgttaagaattgaagttcaggttgtagaataatcataggttaagtttcctatcaaatttggggtttgggtg 176625  T
Q  170 gatgaaaaattgggttttgggctgaaaactggtctgttcccgtagggttgttcatcgcaactcgccacggcgagtaaacttactcgcctcgc 261  Q
    |||||||||||||||||| ||||| |||||||||||||||||||| |||||   |||||||||||||| || |||||| |||||||||||||    
T  176624 gatgaaaaattgggtttttggctggaaactggtctgttcccgtagagttgtctgtcgcaactcgccacagcaagtaaatttactcgcctcgc 176533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 104; Significance: 6e-52; HSPs: 2)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 102 - 261
Target Start/End: Original strand, 14740 - 14899
Alignment:
Q  102 taagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggtagatgaaaaattgggttttgggctgaaaactgg 201  Q
    ||||||| || |||||| |||||||||||||||| | |||||||||||||||||||||||||||||| |||||||||||||||||| |||||| ||  ||    
T  14740 taagaattgaagttcaggttgtagaataaacataggttgagtttcctatcaaatttggggtttgggtggatgaaaaattgggtttttggctgataatagg 14839  T
Q  202 tctgttcccgtagggttgttcatcgcaactcgccacggcgagtaaacttactcgcctcgc 261  Q
    ||||||||||||| ||||||| ||||||||||||||  ||||||||||||||||||||||    
T  14840 tctgttcccgtagagttgttcgtcgcaactcgccacaacgagtaaacttactcgcctcgc 14899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061; HSP #2
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 102 - 261
Target Start/End: Original strand, 23798 - 23957
Alignment:
Q  102 taagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggtagatgaaaaattgggttttgggctgaaaactgg 201  Q
    ||||||| || |||||| |||||||||||||||| | |||||||||||||||||||||||||||||| |||||||||||||||||| |||||| ||  ||    
T  23798 taagaattgaagttcaggttgtagaataaacataggttgagtttcctatcaaatttggggtttgggtggatgaaaaattgggtttttggctgataatagg 23897  T
Q  202 tctgttcccgtagggttgttcatcgcaactcgccacggcgagtaaacttactcgcctcgc 261  Q
    ||||||||||||| ||||||| ||||||||||||||  ||||||||||||||||||||||    
T  23898 tctgttcccgtagagttgttcgtcgcaactcgccacaacgagtaaacttactcgcctcgc 23957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200 (Bit Score: 84; Significance: 5e-40; HSPs: 1)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 70 - 261
Target Start/End: Complemental strand, 18525 - 18334
Alignment:
Q  70 attgaaaagtgtagaaatcatgacaattgtgttaagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggta 169  Q
    ||||||||||||||||| |||   ||||||||||||||| || ||||||  ||||||||||||||| | |||||||||||||||||||||| |||||||     
T  18525 attgaaaagtgtagaaaccatcgaaattgtgttaagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttgggatttgggtt 18426  T
Q  170 gatgaaaaattgggttttgggctgaaaactggtctgttcccgtagggttgttcatcgcaactcgccacggcgagtaaacttactcgcctcgc 261  Q
    |||||||    || ||||||  ||||||||| |||||||||||||  || | | |||||||||||||| ||||||| |||||||||||||||    
T  18425 gatgaaagtggggcttttggagtgaaaactgatctgttcccgtagatttttccgtcgcaactcgccacagcgagtacacttactcgcctcgc 18334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462 (Bit Score: 72; Significance: 8e-33; HSPs: 3)
Name: scaffold0462
Description:

Target: scaffold0462; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 102 - 261
Target Start/End: Complemental strand, 11121 - 10962
Alignment:
Q  102 taagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggtagatgaaaaattgggttttgggctgaaaactgg 201  Q
    ||||||| || ||||||  ||||||||||||||||  |||||||||||||||||||||| ||| ||| |||||||    || ||||||  |||||| |||    
T  11121 taagaattgaagttcaggctgtagaataaacatatcttgagtttcctatcaaatttgggattttggttgatgaaattggggcttttggagtgaaaattgg 11022  T
Q  202 tctgttcccgtagggttgttcatcgcaactcgccacggcgagtaaacttactcgcctcgc 261  Q
    |||||||||||||  |||| | |||||||||||||| |||||||||||||||||||||||    
T  11021 tctgttcccgtagatttgtccgtcgcaactcgccacagcgagtaaacttactcgcctcgc 10962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 197
Target Start/End: Complemental strand, 1156 - 1073
Alignment:
Q  114 ttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggtagatgaaaaattgggttttgggctgaaaa 197  Q
    ||||| ||||||||||| |||||  | ||||||||||||||||| || |||||||||||||||  | || ||||||| ||||||    
T  1156 ttcaggttgtagaataatcatatattaagtttcctatcaaattttggatttgggtagatgaaatttgggattttggggtgaaaa 1073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 197
Target Start/End: Complemental strand, 6662 - 6579
Alignment:
Q  114 ttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggtagatgaaaaattgggttttgggctgaaaa 197  Q
    ||||| ||||||||||| |||||  | ||||||||||||||||| || |||||||||||||||  | || ||||||| ||||||    
T  6662 ttcaggttgtagaataatcatatattaagtttcctatcaaattttggatttgggtagatgaaatttgggattttggggtgaaaa 6579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 72; Significance: 8e-33; HSPs: 2)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 102 - 261
Target Start/End: Complemental strand, 1835 - 1676
Alignment:
Q  102 taagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggtagatgaaaaattgggttttgggctgaaaactgg 201  Q
    ||||||| || ||||||  ||||||||||||||| | ||||||||||||||||||| || ||||||| |||||||    || ||||||  ||||||||||    
T  1835 taagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaattttggatttgggttgatgaaattggggcttttggagtgaaaactgg 1736  T
Q  202 tctgttcccgtagggttgttcatcgcaactcgccacggcgagtaaacttactcgcctcgc 261  Q
    |||||||||||||  |||| | |||| ||||||||| |||||||||||||||||||||||    
T  1735 tctgttcccgtagatttgtccgtcgccactcgccacagcgagtaaacttactcgcctcgc 1676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 73 - 135
Target Start/End: Complemental strand, 42225 - 42163
Alignment:
Q  73 gaaaagtgtagaaatcatgacaattgtgttaagaatcgatgttcagattgtagaataaacata 135  Q
    |||||||||||||| ||||  ||||||||||||||| ||||||||  ||||||||||| ||||    
T  42225 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcatgttgtagaataatcata 42163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 70 - 257
Target Start/End: Complemental strand, 32074 - 31888
Alignment:
Q  70 attgaaaagtgtagaaatcatgacaattgtgttaagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggta 169  Q
    ||||||||||||||||| |||   ||||||||||||| | || ||||||  |||||||||| |||| | |||||||||||||||||||||| |||||||     
T  32074 attgaaaagtgtagaaaccatcgaaattgtgttaagagttgaagttcaggctgtagaataa-cataggttgagtttcctatcaaatttgggatttgggtt 31976  T
Q  170 gatgaaaaattgggttttgggctgaaaactggtctgttcccgtagggttgttcatcgcaactcgccacggcgagtaaacttactcgcc 257  Q
    |||||||    || ||||||  |||| | ||||||||||||||||  |||| | |||||||||||||| ||||||| |||||||||||    
T  31975 gatgaaattggggcttttggagtgaatattggtctgttcccgtagatttgtccgtcgcaactcgccacagcgagtacacttactcgcc 31888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 68; Significance: 2e-30; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 73 - 176
Target Start/End: Original strand, 174232 - 174335
Alignment:
Q  73 gaaaagtgtagaaatcatgacaattgtgttaagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggtagat 172  Q
    |||||||||||||| ||||||||||||||||||||| |||| |||| ||||||||||| |||||| | |||||||||||||||||| | |||||||||||    
T  174232 gaaaagtgtagaaaccatgacaattgtgttaagaattgatggtcaggttgtagaataatcatatgttaagtttcctatcaaatttgagatttgggtagat 174331  T
Q  173 gaaa 176  Q
    ||||    
T  174332 gaaa 174335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 182097 - 182149
Alignment:
Q  1 attttgatttagcatag-ttctagttgaaattgggaattgggggttaggtttt 52  Q
    |||||| ||||||| || ||||||||||||||||||| |||||||||||||||    
T  182097 attttggtttagcaaaggttctagttgaaattgggaagtgggggttaggtttt 182149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 141 - 261
Target Start/End: Original strand, 18835 - 18955
Alignment:
Q  141 agtttcctatcaaatttggggtttgggtagatgaaaaattgggttttgggctgaaaactggtctgttcccgtagggttgttcatcgcaactcgccacggc 240  Q
    |||||||||||||||||| ||||||||| |||||||| || |||||| |||||||||||||||||||| ||||| |||||   || ||||| ||||| ||    
T  18835 agtttcctatcaaatttgtggtttgggtggatgaaaattttggtttttggctgaaaactggtctgttctcgtagagttgtctgtcacaactagccacagc 18934  T
Q  241 gagtaaacttactcgcctcgc 261  Q
    |||||||| ||||||||||||    
T  18935 gagtaaacatactcgcctcgc 18955  T

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Target: scaffold0220 (Bit Score: 65; Significance: 1e-28; HSPs: 2)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 141 - 261
Target Start/End: Complemental strand, 13807 - 13687
Alignment:
Q  141 agtttcctatcaaatttggggtttgggtagatgaaaaattgggttttgggctgaaaactggtctgttcccgtagggttgttcatcgcaactcgccacggc 240  Q
    |||||||||||||||||||||||||||| ||||||||||  ||||||  ||||||||||||||||||||||||  |||||   ||||||||| ||||  |    
T  13807 agtttcctatcaaatttggggtttgggtggatgaaaaataaggtttttcgctgaaaactggtctgttcccgtaaagttgtctgtcgcaactccccacaac 13708  T
Q  241 gagtaaacttactcgcctcgc 261  Q
    || ||||||||||||||||||    
T  13707 gattaaacttactcgcctcgc 13687  T

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Target: scaffold0220; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 174 - 237
Target Start/End: Complemental strand, 8951 - 8888
Alignment:
Q  174 aaaaattgggttttgggctgaaaactggtctgttcccgtagggttgttcatcgcaactcgccac 237  Q
    |||||||||||||| |||||||||||||||||||||||||| ||||||  |||||| |||||||    
T  8951 aaaaattgggtttttggctgaaaactggtctgttcccgtagagttgtttgtcgcaagtcgccac 8888  T

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Target: scaffold0034 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 102 - 243
Target Start/End: Original strand, 29370 - 29511
Alignment:
Q  102 taagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggtagatgaaaaattgggttttgggctgaaaactgg 201  Q
    ||||||| || ||||||  ||||||||||||||| | |||||||||||||||||||||| ||||||| |||||||    || ||||||  || |||||||    
T  29370 taagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttgggatttgggttgatgaaattggggcttttggagtgcaaactgg 29469  T
Q  202 tctgttcccgtagggttgttcatcgcaactcgccacggcgag 243  Q
    |||||||||||||  |||||| |||||||||||||| |||||    
T  29470 tctgttcccgtagatttgttcgtcgcaactcgccacagcgag 29511  T

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Target: scaffold0004 (Bit Score: 62; Significance: 7e-27; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 385160 - 385083
Alignment:
Q  1 attttgatttagcatagttctagttgaaattgggaattgggggttaggtttttggagtattattcttggattgaaaag 78  Q
    |||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||||||||||||    
T  385160 attttggtttagcatagttctagttgaaattgggaattggggattaggtttttggagtatgatttttggattgaaaag 385083  T

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Target: scaffold0004; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 112 - 219
Target Start/End: Original strand, 66243 - 66349
Alignment:
Q  112 tgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggtagatgaaaaattgggttttgggctgaaaactggtctgttcccg 211  Q
    ||||||| ||||||||||| |||| |  ||||||| ||||||||||||| |||| || |||||||    || ||||||  ||||||||||||||||| ||    
T  66243 tgttcaggttgtagaataatcataggtagagtttc-tatcaaatttgggatttgagttgatgaaattggggattttggagtgaaaactggtctgttctcg 66341  T
Q  212 tagggttg 219  Q
    ||| ||||    
T  66342 tagagttg 66349  T

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Target: scaffold0293 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 70 - 214
Target Start/End: Original strand, 19420 - 19564
Alignment:
Q  70 attgaaaagtgtagaaatcatgacaattgtgttaagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggta 169  Q
    ||||||||||||||||| |||   ||||||||||||||| || ||||||  ||||||||||||||| | |||||||||||||||||||||| | || ||     
T  19420 attgaaaagtgtagaaaccatcgaaattgtgttaagaattgaagttcaggctgtagaataaacataagttgagtttcctatcaaatttgggatatgagtt 19519  T
Q  170 gatgaaaaattgggttttgggctgaaaactggtctgttcccgtag 214  Q
    |||||||    || ||||||  |||||||||||||||||||||||    
T  19520 gatgaaattggggcttttggagtgaaaactggtctgttcccgtag 19564  T

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Target: scaffold0070 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 73 - 160
Target Start/End: Complemental strand, 9019 - 8932
Alignment:
Q  73 gaaaagtgtagaaatcatgacaattgtgttaagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggg 160  Q
    |||||||||||||| |||| |||||||||||||||| ||||||||| ||||||||||| |||||| | ||||||||||||||||||||    
T  9019 gaaaagtgtagaaaccatggcaattgtgttaagaattgatgttcaggttgtagaataatcatatgttaagtttcctatcaaatttggg 8932  T

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Target: scaffold0058 (Bit Score: 59; Significance: 4e-25; HSPs: 2)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 70 - 176
Target Start/End: Original strand, 39933 - 40039
Alignment:
Q  70 attgaaaagtgtagaaatcatgacaattgtgttaagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggta 169  Q
    ||||||||||||||||| |||   ||||||||||||||| ||||||||| ||||||||||| |||| | | |||||||||||||| ||||| ||||||||    
T  39933 attgaaaagtgtagaaaccatcgaaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaaattgggatttgggta 40032  T
Q  170 gatgaaa 176  Q
    |||||||    
T  40033 gatgaaa 40039  T

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Target: scaffold0058; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 192 - 261
Target Start/End: Complemental strand, 6268 - 6199
Alignment:
Q  192 tgaaaactggtctgttcccgtagggttgttcatcgcaactcgccacggcgagtaaacttactcgcctcgc 261  Q
    ||||||||||||| || |||||| |||||   |||||||||||||| |||||||||||||||||||||||    
T  6268 tgaaaactggtctatttccgtagagttgtctgtcgcaactcgccacagcgagtaaacttactcgcctcgc 6199  T

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Target: scaffold0151 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 71 - 176
Target Start/End: Complemental strand, 10025 - 9920
Alignment:
Q  71 ttgaaaagtgtagaaatcatgacaattgtgttaagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggtag 170  Q
    |||||||||||||||| |||   ||||||||||||||| ||||||||| ||||||||||| |||| | | |||||||||||||| ||||| |||||||||    
T  10025 ttgaaaagtgtagaaaccatcgaaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaaattgggatttgggtag 9926  T
Q  171 atgaaa 176  Q
    ||||||    
T  9925 atgaaa 9920  T

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Target: scaffold0436 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0436
Description:

Target: scaffold0436; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 102 - 261
Target Start/End: Complemental strand, 8858 - 8699
Alignment:
Q  102 taagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggtagatgaaaaattgggttttgggctgaaaactgg 201  Q
    ||||||| || ||||||  ||||||||||||||| | |||||||||||||||||||| | |||| || |||||||    || ||||||  ||||||||||    
T  8858 taagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttgagatttgagttgatgaaattggggcttttggagtgaaaactgg 8759  T
Q  202 tctgttcccgtagggttgttcatcgcaactcgccacggcgagtaaacttactcgcctcgc 261  Q
    | ||||||| |||  |||| | |||||||||| | | |||||||||||||||||||||||    
T  8758 tttgttcccatagatttgtccgtcgcaactcgacccagcgagtaaacttactcgcctcgc 8699  T

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Target: scaffold0364 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0364
Description:

Target: scaffold0364; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 73 - 160
Target Start/End: Complemental strand, 8092 - 8005
Alignment:
Q  73 gaaaagtgtagaaatcatgacaattgtgttaagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggg 160  Q
    ||||||||||||||||||| ||||||| |||||||| ||||||||| ||||||||||| |||| | | ||||||||||||||||||||    
T  8092 gaaaagtgtagaaatcatggcaattgttttaagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttggg 8005  T

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Target: scaffold0138 (Bit Score: 56; Significance: 3e-23; HSPs: 2)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 102 - 257
Target Start/End: Complemental strand, 34010 - 33856
Alignment:
Q  102 taagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggtagatgaaaaattgggttttgggctgaaaactgg 201  Q
    ||||||| || |||||||  |||||||||||||| | ||||||||||| |||||||| | ||||||| |||||||    || ||||||  ||||||||||    
T  34010 taagaattgaagttcagaccgtagaataaacataggttgagtttccta-caaatttgagatttgggttgatgaaattggggcttttggagtgaaaactgg 33912  T
Q  202 tctgttcccgtagggttgttcatcgcaactcgccacggcgagtaaacttactcgcc 257  Q
    ||||||||| |||  |||| | |||||||| ||||| |||||||||||||||||||    
T  33911 tctgttcccatagatttgtccgtcgcaactagccacagcgagtaaacttactcgcc 33856  T

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Target: scaffold0138; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 102 - 214
Target Start/End: Complemental strand, 20995 - 20883
Alignment:
Q  102 taagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggtagatgaaaaattgggttttgggctgaaaactgg 201  Q
    ||||||| || ||||||  ||||||||||||||| | |||||||||||||||||||||| ||||||| |||||||    || ||||||  ||||||||||    
T  20995 taagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttgggatttgggttgatgaaattggggcttttggagtgaaaactgg 20896  T
Q  202 tctgttcccgtag 214  Q
    |||||||||||||    
T  20895 tctgttcccgtag 20883  T

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Target: scaffold0956 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0956
Description:

Target: scaffold0956; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 73 - 159
Target Start/End: Original strand, 2219 - 2305
Alignment:
Q  73 gaaaagtgtagaaatcatgacaattgtgttaagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttgg 159  Q
    |||||||||||||| ||||||||||||||||||||| ||||||||| ||||||||||| || | | | |||||||||||||||||||    
T  2219 gaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggttgtagaataatcacaggttaagtttcctatcaaatttgg 2305  T

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Target: scaffold1439 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold1439
Description:

Target: scaffold1439; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 73 - 160
Target Start/End: Complemental strand, 1004 - 917
Alignment:
Q  73 gaaaagtgtagaaatcatgacaattgtgttaagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggg 160  Q
    |||||||||||||||||||| ||||||||||||||| ||||||||| ||||||||||| |||| | | ||||| ||| ||||||||||    
T  1004 gaaaagtgtagaaatcatgataattgtgttaagaattgatgttcaggttgtagaataatcataggttaagttttctaacaaatttggg 917  T

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Target: scaffold0334 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 70 - 176
Target Start/End: Complemental strand, 2056 - 1950
Alignment:
Q  70 attgaaaagtgtagaaatcatgacaattgtgttaagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggta 169  Q
    |||||||||||||||||  |||  ||||||||||||||| |||||| || ||||||||||| | || | | |||||||||||||||||||| ||||||||    
T  2056 attgaaaagtgtagaaactatgctaattgtgttaagaattgatgtttaggttgtagaataatcgtaggttaagtttcctatcaaatttgggatttgggta 1957  T
Q  170 gatgaaa 176  Q
     ||||||    
T  1956 tatgaaa 1950  T

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Target: scaffold0117 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 70 - 235
Target Start/End: Complemental strand, 42603 - 42438
Alignment:
Q  70 attgaaaagtgtagaaatcatgacaattgtgttaagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggta 169  Q
    ||||||||||||||||| |||   ||| ||||||||||| || ||||||  |||||||||||| || | |||||||||||||||||||||  ||| | |     
T  42603 attgaaaagtgtagaaaccattgaaatagtgttaagaattgaagttcaggctgtagaataaacctaggttgagtttcctatcaaatttggaattttgttt 42504  T
Q  170 gatgaaaaattgggttttgggctgaaaactggtctgttcccgtagggttgttcatcgcaactcgcc 235  Q
    |||||||    || ||||||  ||||||||||||||||||||| |  |||| | ||||||||||||    
T  42503 gatgaaattggggcttttggagtgaaaactggtctgttcccgttgatttgtccgtcgcaactcgcc 42438  T

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Target: scaffold1276 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold1276
Description:

Target: scaffold1276; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 70 - 177
Target Start/End: Complemental strand, 1071 - 964
Alignment:
Q  70 attgaaaagtgtagaaatcatgacaattgtgttaagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggta 169  Q
    ||||||||||||||||| |||   ||||||||||||| | ||||||||| |||||| |||| |||| | | |||||||||||||||||||| |||||||     
T  1071 attgaaaagtgtagaaaccatagaaattgtgttaagagttgatgttcaggttgtaggataatcataggttaagtttcctatcaaatttgggatttgggtt 972  T
Q  170 gatgaaaa 177  Q
    | ||||||    
T  971 ggtgaaaa 964  T

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Target: scaffold0057 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 73 - 160
Target Start/End: Complemental strand, 72365 - 72278
Alignment:
Q  73 gaaaagtgtagaaatcatgacaattgtgttaagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggg 160  Q
    |||||||||||||| ||||| ||||||||||||||| ||||||||| ||||||||||| |||| | | ||||| ||| ||||||||||    
T  72365 gaaaagtgtagaaaccatgataattgtgttaagaattgatgttcaggttgtagaataatcataggttaagttttctaacaaatttggg 72278  T

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Target: scaffold0057; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 102 - 235
Target Start/End: Original strand, 70007 - 70140
Alignment:
Q  102 taagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggtagatgaaaaattgggttttgggctgaaaactgg 201  Q
    ||||||| || ||||||  ||||||| ||| ||| | |||||||||||||||||||||| ||||||| |||||||    || ||||||  ||||||||||    
T  70007 taagaattgaagttcaggctgtagaaaaaaaataggttgagtttcctatcaaatttgggatttgggttgatgaaattggggcttttggagtgaaaactgg 70106  T
Q  202 tctgttcccgtagggttgttcatcgcaactcgcc 235  Q
    || ||||||||||  |||| | ||||||||||||    
T  70107 tcagttcccgtagatttgtccgtcgcaactcgcc 70140  T

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Target: scaffold0730 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0730
Description:

Target: scaffold0730; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 140 - 261
Target Start/End: Original strand, 6696 - 6818
Alignment:
Q  140 gagtttcctatcaaatttggggtttgggtagatgaaaaattgggttttgggctgaaaactggtctgttcccgtagggttgttcatcgcaactcgccacgg 239  Q
    |||||| |||||||||||||| ||||||| | |||||||||| ||||| |||||||||||||| | ||| ||||| ||||||| ||    ||||||||||    
T  6696 gagttttctatcaaatttgggatttgggtggttgaaaaattgagtttttggctgaaaactggtttcttctcgtagagttgttcgtcatcgctcgccacgg 6795  T
Q  240 cgagt-aaacttactcgcctcgc 261  Q
    ||||| |  ||||||||||||||    
T  6796 cgagtgacccttactcgcctcgc 6818  T

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Target: scaffold0106 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 74 - 168
Target Start/End: Complemental strand, 21911 - 21817
Alignment:
Q  74 aaaagtgtagaaatcatgacaattgtgttaagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggt 168  Q
    ||||||||||||| |||| |||||||||||| ||| ||||||||| ||||||||||| ||||   | || ||||||||||||||||| |||||||    
T  21911 aaaagtgtagaaaccatggcaattgtgttaacaattgatgttcaggttgtagaataatcatagattaagcttcctatcaaatttgggatttgggt 21817  T

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Target: scaffold0046 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 102 - 176
Target Start/End: Original strand, 21931 - 22005
Alignment:
Q  102 taagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggtagatgaaa 176  Q
    ||||||| |||||||||  ||||||||||||||| | |||||||||||||||||||||| ||||||| |||||||    
T  21931 taagaattgatgttcaggctgtagaataaacataggttgagtttcctatcaaatttgggatttgggttgatgaaa 22005  T

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Target: scaffold0205 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 110 - 214
Target Start/End: Original strand, 5778 - 5881
Alignment:
Q  110 gatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggtagatgaaaaattgggttttgggctgaaaactggtctgttcc 209  Q
    ||||||||| |||||||||||||||| | ||||||||| ||  |||||||| ||||||| | || |||||| |||||| |||||||||||||| | ||||    
T  5778 gatgttcaggttgtagaataaacataggttgagtttcccattgaatttgggatttgggtggttg-aaaattaggtttttggctgaaaactggtttcttcc 5876  T
Q  210 cgtag 214  Q
    |||||    
T  5877 cgtag 5881  T

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Target: scaffold0035 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 111 - 214
Target Start/End: Original strand, 39258 - 39361
Alignment:
Q  111 atgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggtagatgaaaaattgggttttgggctgaaaa-ctggtctgttcc 209  Q
    |||||||| ||||||| |||||||| | ||| ||||||||  |||||||| ||||||| | |||||| ||||||||| ||||||||| ||||||||||||    
T  39258 atgttcaggttgtagattaaacataggttgaatttcctattgaatttgggatttgggtggttgaaaa-ttgggtttttggctgaaaaactggtctgttcc 39356  T
Q  210 cgtag 214  Q
    |||||    
T  39357 cgtag 39361  T

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Target: scaffold0035; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 110 - 197
Target Start/End: Original strand, 43949 - 44035
Alignment:
Q  110 gatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggtagatgaaaaattgggttttgggctgaaaa 197  Q
    |||||| || |||||||||||||||| | ||||||||||||  |||||||| ||||||| | || ||||||||||||| |||||||||    
T  43949 gatgtttaggttgtagaataaacataggttgagtttcctattgaatttgggatttgggtggttg-aaaattgggtttttggctgaaaa 44035  T

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Target: scaffold0148 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 140 - 214
Target Start/End: Complemental strand, 8701 - 8627
Alignment:
Q  140 gagtttcctatcaaatttggggtttgggtagatgaaaaattgggttttgggctgaaaactggtctgttcccgtag 214  Q
    |||||| |||||||||||||| ||||||| | |||||||||||||||| ||||||||||| || | |||||||||    
T  8701 gagttttctatcaaatttgggatttgggtggttgaaaaattgggtttttggctgaaaactagtttcttcccgtag 8627  T

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Target: scaffold0026 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 102 - 176
Target Start/End: Complemental strand, 22020 - 21946
Alignment:
Q  102 taagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggtagatgaaa 176  Q
    ||||||| | ||||||| ||||||||||| |||| | | |||||||||||||||||||| |||||||||||||||    
T  22020 taagaattggtgttcaggttgtagaataatcataggttaagtttcctatcaaatttgggatttgggtagatgaaa 21946  T

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Target: scaffold0877 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0877
Description:

Target: scaffold0877; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 73 - 158
Target Start/End: Original strand, 2151 - 2236
Alignment:
Q  73 gaaaagtgtagaaatcatgacaattgtgttaagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttg 158  Q
    |||||||||||||| ||||  ||||||||||||||  ||||||||| ||||||||||| |||| | | ||||||||| ||||||||    
T  2151 gaaaagtgtagaaaccatggtaattgtgttaagaactgatgttcaggttgtagaataatcataggttaagtttcctaacaaatttg 2236  T

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Target: scaffold0290 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 73 - 158
Target Start/End: Complemental strand, 1001 - 916
Alignment:
Q  73 gaaaagtgtagaaatcatgacaattgtgttaagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttg 158  Q
    |||||||||||||| ||||  ||||||||||||| | ||||||||| ||||||||||| |||| | | ||||||||| ||||||||    
T  1001 gaaaagtgtagaaaccatggtaattgtgttaagagttgatgttcaggttgtagaataatcataggttaagtttcctaacaaatttg 916  T

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Target: scaffold0125 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 73 - 158
Target Start/End: Original strand, 1174 - 1259
Alignment:
Q  73 gaaaagtgtagaaatcatgacaattgtgttaagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttg 158  Q
    |||||||||||||| ||||  ||||||||||| ||| ||||||||| ||||||||||| |||| | | ||||||||| ||||||||    
T  1174 gaaaagtgtagaaaccatggtaattgtgttaaaaattgatgttcaggttgtagaataatcataggttaagtttcctaacaaatttg 1259  T

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Target: scaffold0125; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 110 - 187
Target Start/End: Complemental strand, 28442 - 28365
Alignment:
Q  110 gatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggtagatgaaaaattgggtttt 187  Q
    |||| |||| |||||||||||||||| |  |||||| |||| ||||| ||| ||||||||||||| |  |||||||||    
T  28442 gatggtcaggttgtagaataaacataggaagagttttctataaaattagggatttgggtagatgagattttgggtttt 28365  T

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Target: scaffold0394 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0394
Description:

Target: scaffold0394; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 73 - 160
Target Start/End: Complemental strand, 12978 - 12891
Alignment:
Q  73 gaaaagtgtagaaatcatgacaattgtgttaagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggg 160  Q
    |||||||||||||| ||||  ||||||||||||||| ||||||||  ||||||||||| |||| | | ||||| ||| ||||||||||    
T  12978 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcatgttgtagaataatcataggttaagttttctaacaaatttggg 12891  T

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Target: scaffold0515 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0515
Description:

Target: scaffold0515; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 123 - 257
Target Start/End: Complemental strand, 4913 - 4779
Alignment:
Q  123 tagaataaacatatgctgagtttcctatcaaatttggggtttgggtagatgaaaaattgggttttgggctgaaaactggtctgttcccgtagggttgttc 222  Q
    ||||||||||||| | |||||||||| ||||||||||  || |||| |||||||    || ||||||  ||||||||||| |||||||||||  ||   |    
T  4913 tagaataaacataggttgagtttcctttcaaatttggaattagggttgatgaaattggggcttttggagtgaaaactggtatgttcccgtagattttccc 4814  T
Q  223 atcgcaactcgccacggcgagtaaacttactcgcc 257  Q
     || |||||||||||  ||||||||||||||||||    
T  4813 gtcccaactcgccacaacgagtaaacttactcgcc 4779  T

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Target: scaffold0306 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 123 - 257
Target Start/End: Complemental strand, 4913 - 4779
Alignment:
Q  123 tagaataaacatatgctgagtttcctatcaaatttggggtttgggtagatgaaaaattgggttttgggctgaaaactggtctgttcccgtagggttgttc 222  Q
    ||||||||||||| | |||||||||| ||||||||||  || |||| |||||||    || ||||||  ||||||||||| |||||||||||  ||   |    
T  4913 tagaataaacataggttgagtttcctttcaaatttggaattagggttgatgaaattggggcttttggagtgaaaactggtatgttcccgtagattttccc 4814  T
Q  223 atcgcaactcgccacggcgagtaaacttactcgcc 257  Q
     || |||||||||||  ||||||||||||||||||    
T  4813 gtcccaactcgccacaacgagtaaacttactcgcc 4779  T

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Target: scaffold0037 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 79 - 160
Target Start/End: Complemental strand, 82920 - 82839
Alignment:
Q  79 tgtagaaatcatgacaattgtgttaagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggg 160  Q
    |||||||| ||||| ||||||||||||||| ||||||||  ||||||||||| |||| | | ||||| ||| ||||||||||    
T  82920 tgtagaaaccatgataattgtgttaagaattgatgttcaagttgtagaataatcatacgttaagttttctaacaaatttggg 82839  T

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Target: scaffold0031 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 113 - 214
Target Start/End: Original strand, 127510 - 127610
Alignment:
Q  113 gttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggtagatgaaaaattgggttttgggctgaaaactggtctgttcccgt 212  Q
    ||||| ||||||||||||||||| | |||||||||| |  |||||||| ||| ||| | || ||||||||||||| |||||||||| ||| | |||||||    
T  127510 gttcaaattgtagaataaacataggttgagtttccttttgaatttgggattttggtggttg-aaaattgggtttttggctgaaaacaggtttcttcccgt 127608  T
Q  213 ag 214  Q
    ||    
T  127609 ag 127610  T

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Target: scaffold0023 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 73 - 130
Target Start/End: Complemental strand, 163262 - 163205
Alignment:
Q  73 gaaaagtgtagaaatcatgacaattgtgttaagaatcgatgttcagattgtagaataa 130  Q
    |||||||||||||| ||||  ||||||||||||||| ||||||||| |||||||||||    
T  163262 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataa 163205  T

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Target: scaffold0676 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0676
Description:

Target: scaffold0676; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 112 - 176
Target Start/End: Complemental strand, 2702 - 2638
Alignment:
Q  112 tgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggtagatgaaa 176  Q
    |||||||||||| |||||| |||| | | |||||||||||||||||||| |||| ||||||||||    
T  2702 tgttcagattgttgaataatcatacgttaagtttcctatcaaatttgggatttgagtagatgaaa 2638  T

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Target: scaffold0113 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 173
Target Start/End: Complemental strand, 35390 - 35319
Alignment:
Q  102 taagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggtagatg 173  Q
    ||||||| ||||||||| |||||||||||||||| | ||||||||||||  |||||||| ||| ||| ||||    
T  35390 taagaattgatgttcaggttgtagaataaacataggttgagtttcctattgaatttgggatttaggttgatg 35319  T

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Target: scaffold0090 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 52
Target Start/End: Original strand, 31514 - 31549
Alignment:
Q  17 gttctagttgaaattgggaattgggggttaggtttt 52  Q
    ||||||||||||||||||||||||||||||||||||    
T  31514 gttctagttgaaattgggaattgggggttaggtttt 31549  T

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Target: scaffold0112 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 73 - 158
Target Start/End: Original strand, 23247 - 23332
Alignment:
Q  73 gaaaagtgtagaaatcatgacaattgtgttaagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttg 158  Q
    ||||| |||||||| ||||  ||||||||||||||| ||||||||  ||||||||||| |||| | | ||||||||| | ||||||    
T  23247 gaaaaatgtagaaaccatggtaattgtgttaagaattgatgttcatgttgtagaataatcataggttaagtttcctaacgaatttg 23332  T

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Target: scaffold0555 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 160
Target Start/End: Original strand, 8951 - 9009
Alignment:
Q  102 taagaatcgatgttcagattgtagaataaacatatgctgagtttcctatcaaatttggg 160  Q
    ||||||| ||||||||| ||||||||||||| || | ||||||||||||  ||||||||    
T  8951 taagaattgatgttcaggttgtagaataaacttaggttgagtttcctattgaatttggg 9009  T

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Target: scaffold0213 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 176
Target Start/End: Complemental strand, 19001 - 18939
Alignment:
Q  114 ttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggtagatgaaa 176  Q
    ||||| ||||||||||| |||||| | |||||||||||||||||  | || ||||||||||||    
T  19001 ttcaggttgtagaataatcatatgttaagtttcctatcaaatttttgattagggtagatgaaa 18939  T

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Target: scaffold0086 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 172
Target Start/End: Original strand, 35652 - 35710
Alignment:
Q  114 ttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggtagat 172  Q
    ||||| ||||||||||| |||| | | |||||||||||||||||||  |||||||||||    
T  35652 ttcaggttgtagaataatcataggtttagtttcctatcaaatttggaatttgggtagat 35710  T

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Target: scaffold0278 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 118
Target Start/End: Original strand, 23839 - 23887
Alignment:
Q  70 attgaaaagtgtagaaatcatgacaattgtgttaagaatcgatgttcag 118  Q
    ||||||||||||||||| |||   ||||||||||||||| |||||||||    
T  23839 attgaaaagtgtagaaaccatcgaaattgtgttaagaattgatgttcag 23887  T

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Target: scaffold0149 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 176
Target Start/End: Complemental strand, 21428 - 21364
Alignment:
Q  112 tgttcagattgtagaataaacatatgctgagtttcctatcaaatttggggtttgggtagatgaaa 176  Q
    ||||||| ||||||||||| ||||   | ||||| |||||||||||||| |||||||| ||||||    
T  21428 tgttcaggttgtagaataatcatagtttaagttttctatcaaatttgggatttgggtatatgaaa 21364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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