View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8451_low_13 (Length: 208)

Name: NF8451_low_13
Description: NF8451
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8451_low_13
NF8451_low_13
[»] chr1 (3 HSPs)
chr1 (14-181)||(2340513-2340680)
chr1 (14-181)||(6202006-6202173)
chr1 (97-183)||(5633170-5633256)
[»] scaffold0019 (1 HSPs)
scaffold0019 (14-181)||(17842-18009)
[»] chr7 (10 HSPs)
chr7 (14-181)||(841259-841426)
chr7 (14-181)||(848435-848602)
chr7 (14-181)||(1206439-1206606)
chr7 (14-181)||(8813510-8813677)
chr7 (33-181)||(23883831-23883979)
chr7 (14-181)||(16397500-16397667)
chr7 (97-181)||(30373997-30374081)
chr7 (97-181)||(9465613-9465697)
chr7 (32-81)||(802575-802624)
chr7 (32-81)||(16291442-16291491)
[»] chr5 (15 HSPs)
chr5 (14-181)||(29896192-29896359)
chr5 (14-181)||(26872146-26872313)
chr5 (14-181)||(1801192-1801359)
chr5 (14-181)||(7789888-7790055)
chr5 (14-181)||(7258978-7259145)
chr5 (14-181)||(12392469-12392636)
chr5 (30-180)||(22956009-22956159)
chr5 (14-181)||(5444255-5444422)
chr5 (14-181)||(17953047-17953214)
chr5 (14-181)||(31516255-31516422)
chr5 (14-181)||(36380021-36380188)
chr5 (14-181)||(37004693-37004860)
chr5 (97-181)||(11948454-11948538)
chr5 (97-181)||(15788772-15788856)
chr5 (32-81)||(34464648-34464697)
[»] scaffold0183 (1 HSPs)
scaffold0183 (14-181)||(31302-31469)
[»] scaffold0387 (1 HSPs)
scaffold0387 (14-181)||(6357-6524)
[»] chr6 (9 HSPs)
chr6 (14-181)||(20044915-20045082)
chr6 (14-181)||(24147730-24147897)
chr6 (14-181)||(620187-620354)
chr6 (14-181)||(2410953-2411120)
chr6 (33-181)||(2411485-2411634)
chr6 (14-181)||(20055157-20055324)
chr6 (14-181)||(9140448-9140615)
chr6 (14-181)||(16822045-16822212)
chr6 (97-181)||(27513102-27513186)
[»] chr8 (1 HSPs)
chr8 (14-181)||(21480222-21480389)
[»] chr3 (13 HSPs)
chr3 (14-181)||(6197473-6197640)
chr3 (14-181)||(15534156-15534323)
chr3 (14-181)||(8619513-8619680)
chr3 (33-181)||(8807408-8807556)
chr3 (33-172)||(21610838-21610977)
chr3 (14-181)||(5955002-5955169)
chr3 (14-181)||(37260813-37260980)
chr3 (14-178)||(46397533-46397697)
chr3 (14-77)||(15914485-15914548)
chr3 (14-77)||(15597173-15597236)
chr3 (97-181)||(46376304-46376388)
chr3 (32-81)||(20439101-20439150)
chr3 (130-181)||(15597069-15597120)
[»] scaffold0441 (1 HSPs)
scaffold0441 (14-181)||(10109-10276)
[»] chr4 (5 HSPs)
chr4 (14-181)||(15899789-15899956)
chr4 (15-181)||(14920423-14920589)
chr4 (33-178)||(16725095-16725240)
chr4 (33-181)||(22707042-22707190)
chr4 (97-181)||(18039416-18039500)
[»] scaffold0551 (2 HSPs)
scaffold0551 (14-181)||(4284-4451)
scaffold0551 (14-181)||(10398-10565)
[»] scaffold0435 (2 HSPs)
scaffold0435 (14-178)||(12953-13117)
scaffold0435 (14-178)||(13629-13793)
[»] scaffold0104 (2 HSPs)
scaffold0104 (14-83)||(36529-36598)
scaffold0104 (102-181)||(29392-29471)
[»] scaffold0002 (1 HSPs)
scaffold0002 (14-181)||(301852-302019)
[»] chr2 (2 HSPs)
chr2 (14-181)||(22945341-22945508)
chr2 (97-181)||(12379689-12379773)
[»] scaffold0029 (1 HSPs)
scaffold0029 (14-181)||(25109-25276)
[»] scaffold0094 (2 HSPs)
scaffold0094 (14-77)||(39522-39585)
scaffold0094 (130-181)||(39418-39469)
[»] scaffold0595 (1 HSPs)
scaffold0595 (97-183)||(9006-9092)


Alignment Details
Target: chr1 (Bit Score: 152; Significance: 1e-80; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 14 - 181
Target Start/End: Complemental strand, 2340680 - 2340513
Alignment:
Q  14 acctgtgatgcatactattccacaaaatgaagaacccatcttccattcagggaacatggaggcctatgatggaatgagtaacttacgagaaaagtatgat 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| ||||||||||||||||||||||||||||    
T  2340680 acctgtgatgcatactattccacaaaatgaagaacccatcttccattcagggaacatggagacttatgatgaaatgagtaacttacgagaaaagtatgat 2340581  T
Q  114 gaactgcaacgagacgtgaaagctctccgtgggaaaggaaaatttgggaagactgcttacgatctctg 181  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  2340580 gaactgcaacgagacgtgaaagctctccgtgggaaaggaaaatttggaaagactgcttacgatctctg 2340513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 14 - 181
Target Start/End: Complemental strand, 6202173 - 6202006
Alignment:
Q  14 acctgtgatgcatactattccacaaaatgaagaacccatcttccattcagggaacatggaggcctatgatggaatgagtaacttacgagaaaagtatgat 113  Q
    |||||| |||||||| |||||||||||||||||||| |||||||||||||||||||||||  || || || || ||| | |||| |  ||||| ||||||    
T  6202173 acctgtaatgcataccattccacaaaatgaagaacctatcttccattcagggaacatggaacccgatcatagagtgattgacttgcaggaaaaatatgat 6202074  T
Q  114 gaactgcaacgagacgtgaaagctctccgtgggaaaggaaaatttgggaagactgcttacgatctctg 181  Q
    ||| |||| |||||  |||  |||||||||||||||||||||||||| || || ||||| ||||||||    
T  6202073 gaaatgcatcgagaaatgagggctctccgtgggaaaggaaaatttggaaaaaccgcttatgatctctg 6202006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 97 - 183
Target Start/End: Complemental strand, 5633256 - 5633170
Alignment:
Q  97 tacgagaaaagtatgatgaactgcaacgagacgtgaaagctctccgtgggaaaggaaaatttgggaagactgcttacgatctctgct 183  Q
    ||||||| |||||||||||||| |  |||||| |||||||||||| ||  ||||| ||||| ||||||||||| |||||||||||||    
T  5633256 tacgagagaagtatgatgaactacgccgagacatgaaagctctccatgaaaaagggaaattcgggaagactgcgtacgatctctgct 5633170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 148; Significance: 3e-78; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 14 - 181
Target Start/End: Complemental strand, 18009 - 17842
Alignment:
Q  14 acctgtgatgcatactattccacaaaatgaagaacccatcttccattcagggaacatggaggcctatgatggaatgagtaacttacgagaaaagtatgat 113  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| | ||||||||||||||||||||    
T  18009 acctgtgatgcatactattccacaaaatgaagaacctatcttccattcagggaacatggaggcctatgatggagtgaatgacttacgagaaaagtatgat 17910  T
Q  114 gaactgcaacgagacgtgaaagctctccgtgggaaaggaaaatttgggaagactgcttacgatctctg 181  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  17909 gaactgcaacgagacgtgaaagctctccgtgggaaaggaaaatttggaaagactgcttacgatctctg 17842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 148; Significance: 3e-78; HSPs: 10)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 14 - 181
Target Start/End: Original strand, 841259 - 841426
Alignment:
Q  14 acctgtgatgcatactattccacaaaatgaagaacccatcttccattcagggaacatggaggcctatgatggaatgagtaacttacgagaaaagtatgat 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| ||||||||||||||||||||    
T  841259 acctgtgatgcatactattccacaaaatgaagaacccatcttccattcagggaacatggatgcctatgatggagtgagtgacttacgagaaaagtatgat 841358  T
Q  114 gaactgcaacgagacgtgaaagctctccgtgggaaaggaaaatttgggaagactgcttacgatctctg 181  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  841359 gaactgcaacgagatgtgaaagctctccgtgggaaaggaaaatttggaaagactgcttacgatctctg 841426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 14 - 181
Target Start/End: Original strand, 848435 - 848602
Alignment:
Q  14 acctgtgatgcatactattccacaaaatgaagaacccatcttccattcagggaacatggaggcctatgatggaatgagtaacttacgagaaaagtatgat 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| ||||||||||||||||||||    
T  848435 acctgtgatgcatactattccacaaaatgaagaacccatcttccattcagggaacatggatgcctatgatggagtgagtgacttacgagaaaagtatgat 848534  T
Q  114 gaactgcaacgagacgtgaaagctctccgtgggaaaggaaaatttgggaagactgcttacgatctctg 181  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  848535 gaactgcaacgagatgtgaaagctctccgtgggaaaggaaaatttggaaagactgcttacgatctctg 848602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 14 - 181
Target Start/End: Original strand, 1206439 - 1206606
Alignment:
Q  14 acctgtgatgcatactattccacaaaatgaagaacccatcttccattcagggaacatggaggcctatgatggaatgagtaacttacgagaaaagtatgat 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| ||||||||||||||||||||    
T  1206439 acctgtgatgcatactattccacaaaatgaagaacccatcttccattcagggaacatggatgcctatgatggagtgagtgacttacgagaaaagtatgat 1206538  T
Q  114 gaactgcaacgagacgtgaaagctctccgtgggaaaggaaaatttgggaagactgcttacgatctctg 181  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  1206539 gaactgcaacgagatgtgaaagctctccgtgggaaaggaaaatttggaaagactgcttacgatctctg 1206606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 14 - 181
Target Start/End: Original strand, 8813510 - 8813677
Alignment:
Q  14 acctgtgatgcatactattccacaaaatgaagaacccatcttccattcagggaacatggaggcctatgatggaatgagtaacttacgagaaaagtatgat 113  Q
    |||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| || ||||| |||||| | ||||||| ||||| ||||||    
T  8813510 acctatgatgcataccattccacaaaatgaagaacccatcttccattcagggaacatggagcccgatgatagaatgaatgacttacgggaaaaatatgat 8813609  T
Q  114 gaactgcaacgagacgtgaaagctctccgtgggaaaggaaaatttgggaagactgcttacgatctctg 181  Q
    ||| |||| |||||  |||  |||||||||||||||| ||||||||| ||||| ||||| ||||||||    
T  8813610 gaaatgcatcgagaaatgagggctctccgtgggaaagaaaaatttggaaagaccgcttatgatctctg 8813677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 33 - 181
Target Start/End: Complemental strand, 23883979 - 23883831
Alignment:
Q  33 ccacaaaatgaagaacccatcttccattcagggaacatggaggcctatgatggaatgagtaacttacgagaaaagtatgatgaactgcaacgagacgtga 132  Q
    |||||||||||||||||||||||||||||||||||||||||| || ||||| || ||| | |||| || ||||| ||||||||| |||| ||||| ||||    
T  23883979 ccacaaaatgaagaacccatcttccattcagggaacatggagcccgatgatagagtgaatgacttgcgggaaaaatatgatgaaatgcatcgagaagtga 23883880  T
Q  133 aagctctccgtgggaaaggaaaatttgggaagactgcttacgatctctg 181  Q
      |||||||  ||||||| ||||||||| ||||| ||||| ||| ||||    
T  23883879 gggctctcctcgggaaagaaaaatttggaaagaccgcttatgatttctg 23883831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 14 - 181
Target Start/End: Complemental strand, 16397667 - 16397500
Alignment:
Q  14 acctgtgatgcatactattccacaaaatgaagaacccatcttccattcagggaacatggaggcctatgatggaatgagtaacttacgagaaaagtatgat 113  Q
    ||||||||| ||||| || || |||| ||||||||| ||||| |||||||||||  | ||||| || || | | | ||  || |||||||||||||||||    
T  16397667 acctgtgatacatacaatcccgcaaactgaagaacctatctttcattcagggaatgtagaggcttacgaggaagtaagcgacctacgagaaaagtatgat 16397568  T
Q  114 gaactgcaacgagacgtgaaagctctccgtgggaaaggaaaatttgggaagactgcttacgatctctg 181  Q
    ||||| |  |||||| ||||||  |||||||  ||||| ||||||||||||||||| |||||||||||    
T  16397567 gaactacgccgagacatgaaagtcctccgtgaaaaagggaaatttgggaagactgcgtacgatctctg 16397500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 97 - 181
Target Start/End: Complemental strand, 30374081 - 30373997
Alignment:
Q  97 tacgagaaaagtatgatgaactgcaacgagacgtgaaagctctccgtgggaaaggaaaatttgggaagactgcttacgatctctg 181  Q
    |||||||||||||||||||||| |  |||||| ||||||| |||||||  ||||| ||||||||||||||||| |||||||||||    
T  30374081 tacgagaaaagtatgatgaactacgccgagacatgaaagccctccgtgaaaaagggaaatttgggaagactgcgtacgatctctg 30373997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 97 - 181
Target Start/End: Original strand, 9465613 - 9465697
Alignment:
Q  97 tacgagaaaagtatgatgaactgcaacgagacgtgaaagctctccgtgggaaaggaaaatttgggaagactgcttacgatctctg 181  Q
    |||||||||||||||| ||||| |  |||||| ||||||| |||||||  ||||| ||||||||||||||||| |||||||||||    
T  9465613 tacgagaaaagtatgacgaactacgccgagacatgaaagccctccgtgaaaaagggaaatttgggaagactgcgtacgatctctg 9465697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 81
Target Start/End: Complemental strand, 802624 - 802575
Alignment:
Q  32 tccacaaaatgaagaacccatcttccattcagggaacatggaggcctatg 81  Q
    ||||||||||||||||||||||||||||||| |||  ||| |||||||||    
T  802624 tccacaaaatgaagaacccatcttccattcaaggagtatgaaggcctatg 802575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 81
Target Start/End: Complemental strand, 16291491 - 16291442
Alignment:
Q  32 tccacaaaatgaagaacccatcttccattcagggaacatggaggcctatg 81  Q
    ||||||||||||||||||||||||||||||| |||  ||| |||||||||    
T  16291491 tccacaaaatgaagaacccatcttccattcaaggagtatgaaggcctatg 16291442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 148; Significance: 3e-78; HSPs: 15)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 14 - 181
Target Start/End: Original strand, 29896192 - 29896359
Alignment:
Q  14 acctgtgatgcatactattccacaaaatgaagaacccatcttccattcagggaacatggaggcctatgatggaatgagtaacttacgagaaaagtatgat 113  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | || |||||||||||||||||||||||||||||||||    
T  29896192 acctgtgatgcatactattccacaaaatgaagaatccatcttccattcagggaacatggagacttacgatggaatgagtaacttacgagaaaagtatgat 29896291  T
Q  114 gaactgcaacgagacgtgaaagctctccgtgggaaaggaaaatttgggaagactgcttacgatctctg 181  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  29896292 gaactgcaacgagacgtgaaagctctccgtgggaaaggaaaatttggaaagactgcttacgatctctg 29896359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 14 - 181
Target Start/End: Original strand, 26872146 - 26872313
Alignment:
Q  14 acctgtgatgcatactattccacaaaatgaagaacccatcttccattcagggaacatggaggcctatgatggaatgagtaacttacgagaaaagtatgat 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  26872146 acctgtgatgcatactattccacaaaatgaagaacccatcttccattcagggaacatggaggcctatgatggagtgagtgacttacgagaaaagtatgat 26872245  T
Q  114 gaactgcaacgagacgtgaaagctctccgtgggaaaggaaaatttgggaagactgcttacgatctctg 181  Q
    |||||||||||||| |||||||||||||||||||| | ||||||||| ||||||||||||||||||||    
T  26872246 gaactgcaacgagatgtgaaagctctccgtgggaaggaaaaatttggaaagactgcttacgatctctg 26872313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 14 - 181
Target Start/End: Original strand, 1801192 - 1801359
Alignment:
Q  14 acctgtgatgcatactattccacaaaatgaagaacccatcttccattcagggaacatggaggcctatgatggaatgagtaacttacgagaaaagtatgat 113  Q
    |||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| || ||||| |||||| | ||||||| ||||| ||||||    
T  1801192 acctatgatgcataccattccacaaaatgaagaacccatcttccattcagggaacatggagcccgatgatagaatgaatgacttacgggaaaaatatgat 1801291  T
Q  114 gaactgcaacgagacgtgaaagctctccgtgggaaaggaaaatttgggaagactgcttacgatctctg 181  Q
    ||| |||| |||||  |||  |||||||||||||||| ||||||||| ||||| ||||| ||||||||    
T  1801292 gaaatgcatcgagaaatgagggctctccgtgggaaagaaaaatttggaaagaccgcttatgatctctg 1801359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 14 - 181
Target Start/End: Original strand, 7789888 - 7790055
Alignment:
Q  14 acctgtgatgcatactattccacaaaatgaagaacccatcttccattcagggaacatggaggcctatgatggaatgagtaacttacgagaaaagtatgat 113  Q
    |||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| || ||||| |||||| | ||||||| ||||| ||||||    
T  7789888 acctatgatgcataccattccacaaaatgaagaacccatcttccattcagggaacatggagcccgatgatagaatgaatgacttacgggaaaaatatgat 7789987  T
Q  114 gaactgcaacgagacgtgaaagctctccgtgggaaaggaaaatttgggaagactgcttacgatctctg 181  Q
    ||| |||| |||||  |||  |||||||||||||||| ||||||||| ||||| ||||| ||||||||    
T  7789988 gaaatgcatcgagaaatgagggctctccgtgggaaagaaaaatttggaaagaccgcttatgatctctg 7790055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 14 - 181
Target Start/End: Complemental strand, 7259145 - 7258978
Alignment:
Q  14 acctgtgatgcatactattccacaaaatgaagaacccatcttccattcagggaacatggaggcctatgatggaatgagtaacttacgagaaaagtatgat 113  Q
    |||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| || ||||| |||||| | |||| || ||||| ||||||    
T  7259145 acctatgatgcataccattccacaaaatgaagaacccatcttccattcagggaacatggagcccgatgatagaatgaatgacttgcgggaaaaatatgat 7259046  T
Q  114 gaactgcaacgagacgtgaaagctctccgtgggaaaggaaaatttgggaagactgcttacgatctctg 181  Q
    ||| |||| |||||  |||  |||||||||||||||| ||||||||| ||||| ||||| ||||||||    
T  7259045 gaaatgcatcgagaaatgagggctctccgtgggaaagaaaaatttggaaagaccgcttatgatctctg 7258978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 14 - 181
Target Start/End: Complemental strand, 12392636 - 12392469
Alignment:
Q  14 acctgtgatgcatactattccacaaaatgaagaacccatcttccattcagggaacatggaggcctatgatggaatgagtaacttacgagaaaagtatgat 113  Q
    |||| ||||||||||  |||||||||||||||||||||||||||||||||||||||||||| || | ||| || | | | |||| || ||||| ||||||    
T  12392636 acctatgatgcataccgttccacaaaatgaagaacccatcttccattcagggaacatggagcccgacgatagagtaaatgacttgcgggaaaaatatgat 12392537  T
Q  114 gaactgcaacgagacgtgaaagctctccgtgggaaaggaaaatttgggaagactgcttacgatctctg 181  Q
    ||| |||| ||||| ||||  |||||||  ||||||| ||||||||| ||||| ||||| ||||||||    
T  12392536 gaaatgcatcgagaagtgagggctctcctcgggaaagaaaaatttggaaagaccgcttatgatctctg 12392469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 30 - 180
Target Start/End: Complemental strand, 22956159 - 22956009
Alignment:
Q  30 attccacaaaatgaagaacccatcttccattcagggaacatggaggcctatgatggaatgagtaacttacgagaaaagtatgatgaactgcaacgagacg 129  Q
    ||||||||||| |||||||| |||||||||||||||||||||||||||| |||| || ||| | |||| |  ||||| ||||||||| |||| |||||      
T  22956159 attccacaaaacgaagaacctatcttccattcagggaacatggaggcctgtgatagagtgaatgacttgcaggaaaaatatgatgaaatgcatcgagaaa 22956060  T
Q  130 tgaaagctctccgtgggaaaggaaaatttgggaagactgcttacgatctct 180  Q
    |||   ||||||||||||||||||||||||  ||||| |||||||||||||    
T  22956059 tgaggtctctccgtgggaaaggaaaatttgaaaagaccgcttacgatctct 22956009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 14 - 181
Target Start/End: Complemental strand, 5444422 - 5444255
Alignment:
Q  14 acctgtgatgcatactattccacaaaatgaagaacccatcttccattcagggaacatggaggcctatgatggaatgagtaacttacgagaaaagtatgat 113  Q
    ||||||||| ||||| ||||| |||| |||||| || ||||| |||||||||||    ||||| || || ||| | ||  || |||||||||||||||||    
T  5444422 acctgtgatacatacaattccgcaaactgaagagcctatctttcattcagggaatgcagaggcttacgagggagtaagcgacctacgagaaaagtatgat 5444323  T
Q  114 gaactgcaacgagacgtgaaagctctccgtgggaaaggaaaatttgggaagactgcttacgatctctg 181  Q
    ||||| |  ||||||||||||||||||| ||  ||||| ||||||||||||||||| ||||| |||||    
T  5444322 gaactacgccgagacgtgaaagctctccatgaaaaagggaaatttgggaagactgcgtacgacctctg 5444255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 14 - 181
Target Start/End: Original strand, 17953047 - 17953214
Alignment:
Q  14 acctgtgatgcatactattccacaaaatgaagaacccatcttccattcagggaacatggaggcctatgatggaatgagtaacttacgagaaaagtatgat 113  Q
    ||||||||| ||||| ||||| |||| ||||||||| ||||| |||||||||||  | ||||| || || | | | ||  || ||| |||||||||||||    
T  17953047 acctgtgatacatacaattccgcaaactgaagaacctatctttcattcagggaatgtagaggcttacgaggaagtaagcgacctacaagaaaagtatgat 17953146  T
Q  114 gaactgcaacgagacgtgaaagctctccgtgggaaaggaaaatttgggaagactgcttacgatctctg 181  Q
    ||||| |  |||||| ||||||| |||||||  ||||| ||||||||||||||||| |||||||||||    
T  17953147 gaactacgccgagacatgaaagccctccgtgataaagggaaatttgggaagactgcgtacgatctctg 17953214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 14 - 181
Target Start/End: Original strand, 31516255 - 31516422
Alignment:
Q  14 acctgtgatgcatactattccacaaaatgaagaacccatcttccattcagggaacatggaggcctatgatggaatgagtaacttacgagaaaagtatgat 113  Q
    ||||||||| ||||| || || |||| ||||||||| ||||| |||||||||||  | ||||| || || | | | ||  || |||||||||||||||||    
T  31516255 acctgtgatacatacaatcccgcaaactgaagaacctatctttcattcagggaatgtagaggcttacgaggaagtaagcgacctacgagaaaagtatgat 31516354  T
Q  114 gaactgcaacgagacgtgaaagctctccgtgggaaaggaaaatttgggaagactgcttacgatctctg 181  Q
    ||||| |  |||||| ||||||| |||||||  ||||| ||||||||||||||||| |||||||||||    
T  31516355 gaactacgccgagacatgaaagccctccgtgaaaaagggaaatttgggaagactgcgtacgatctctg 31516422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 14 - 181
Target Start/End: Complemental strand, 36380188 - 36380021
Alignment:
Q  14 acctgtgatgcatactattccacaaaatgaagaacccatcttccattcagggaacatggaggcctatgatggaatgagtaacttacgagaaaagtatgat 113  Q
    ||||||||| ||||| ||||| |||| |||||| || ||||| |||||||||||    ||||| || || | | | ||  || |||||| ||||||||||    
T  36380188 acctgtgatacatacaattccgcaaactgaagagcctatctttcattcagggaatgcagaggcttacgaagaagtaagcgacctacgagcaaagtatgat 36380089  T
Q  114 gaactgcaacgagacgtgaaagctctccgtgggaaaggaaaatttgggaagactgcttacgatctctg 181  Q
    ||||| |  |||||| |||||||||||| ||  ||||| ||||| ||||||||||| |||||||||||    
T  36380088 gaactacgccgagacatgaaagctctccatgaaaaagggaaattcgggaagactgcgtacgatctctg 36380021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 14 - 181
Target Start/End: Complemental strand, 37004860 - 37004693
Alignment:
Q  14 acctgtgatgcatactattccacaaaatgaagaacccatcttccattcagggaacatggaggcctatgatggaatgagtaacttacgagaaaagtatgat 113  Q
    ||||||||| ||||| ||||| |||| |||||| || ||||| |||||||||||    ||||| || || | | | ||  || |||||| ||||||||||    
T  37004860 acctgtgatacatacaattccgcaaactgaagagcctatctttcattcagggaatgcagaggcttacgaagaagtaagcgacctacgagcaaagtatgat 37004761  T
Q  114 gaactgcaacgagacgtgaaagctctccgtgggaaaggaaaatttgggaagactgcttacgatctctg 181  Q
    ||||| |  |||||| |||||||||||| ||  ||||| ||||| ||||||||||| |||||||||||    
T  37004760 gaactacgccgagacatgaaagctctccatgaaaaagggaaattcgggaagactgcgtacgatctctg 37004693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 97 - 181
Target Start/End: Complemental strand, 11948538 - 11948454
Alignment:
Q  97 tacgagaaaagtatgatgaactgcaacgagacgtgaaagctctccgtgggaaaggaaaatttgggaagactgcttacgatctctg 181  Q
    ||||||| |||||||||||||| |  |||||| |||||||||||| ||  ||||| ||||| ||||||||||| |||||||||||    
T  11948538 tacgagagaagtatgatgaactacgccgagacatgaaagctctccatgaaaaagggaaattcgggaagactgcgtacgatctctg 11948454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 97 - 181
Target Start/End: Complemental strand, 15788856 - 15788772
Alignment:
Q  97 tacgagaaaagtatgatgaactgcaacgagacgtgaaagctctccgtgggaaaggaaaatttgggaagactgcttacgatctctg 181  Q
    ||||||| |||||||||||||| |  |||||| |||||||||||| ||  ||||| ||||| ||||||||||| |||||||||||    
T  15788856 tacgagagaagtatgatgaactacgccgagacatgaaagctctccatgaaaaagggaaattcgggaagactgcgtacgatctctg 15788772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 81
Target Start/End: Original strand, 34464648 - 34464697
Alignment:
Q  32 tccacaaaatgaagaacccatcttccattcagggaacatggaggcctatg 81  Q
    ||||||||||||||||||||||||||||||| |||  ||| |||||||||    
T  34464648 tccacaaaatgaagaacccatcttccattcaaggagtatgaaggcctatg 34464697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0183 (Bit Score: 128; Significance: 2e-66; HSPs: 1)
Name: scaffold0183
Description:

Target: scaffold0183; HSP #1
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 14 - 181
Target Start/End: Original strand, 31302 - 31469
Alignment:
Q  14 acctgtgatgcatactattccacaaaatgaagaacccatcttccattcagggaacatggaggcctatgatggaatgagtaacttacgagaaaagtatgat 113  Q
    ||||||||||||||||||||||||||||||||| || ||||||||||||| | |||||||||||||| || |||||||| ||||||||||||||||||||    
T  31302 acctgtgatgcatactattccacaaaatgaagagcctatcttccattcagaggacatggaggcctataatagaatgagtgacttacgagaaaagtatgat 31401  T
Q  114 gaactgcaacgagacgtgaaagctctccgtgggaaaggaaaatttgggaagactgcttacgatctctg 181  Q
    |||||||||||||| |||||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  31402 gaactgcaacgagatgtgaaagctctccgtgggaaagaaaaatttggaaagactgcttacgatctctg 31469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0387 (Bit Score: 108; Significance: 2e-54; HSPs: 1)
Name: scaffold0387
Description:

Target: scaffold0387; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 14 - 181
Target Start/End: Complemental strand, 6524 - 6357
Alignment:
Q  14 acctgtgatgcatactattccacaaaatgaagaacccatcttccattcagggaacatggaggcctatgatggaatgagtaacttacgagaaaagtatgat 113  Q
    |||||||||||||||||||||||||||||| ||||||||| |||||| |||||| ||||||||||||||| || ||| | |||||| |||||||||||||    
T  6524 acctgtgatgcatactattccacaaaatgacgaacccatcatccatttagggaatatggaggcctatgatagagtgaatgacttacaagaaaagtatgat 6425  T
Q  114 gaactgcaacgagacgtgaaagctctccgtgggaaaggaaaatttgggaagactgcttacgatctctg 181  Q
    ||||||||||||||| ||||| ||||| ||||||||| ||||||||| ||||| ||||||||||||||    
T  6424 gaactgcaacgagacatgaaaactctctgtgggaaagaaaaatttggaaagaccgcttacgatctctg 6357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 92; Significance: 7e-45; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 14 - 181
Target Start/End: Complemental strand, 20045082 - 20044915
Alignment:
Q  14 acctgtgatgcatactattccacaaaatgaagaacccatcttccattcagggaacatggaggcctatgatggaatgagtaacttacgagaaaagtatgat 113  Q
    |||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| || ||||| |||||| | ||||||| ||||| ||||||    
T  20045082 acctatgatgcataccattccacaaaatgaagaacccatcttccattcagggaacatggagcccgatgatagaatgaatgacttacgggaaaaatatgat 20044983  T
Q  114 gaactgcaacgagacgtgaaagctctccgtgggaaaggaaaatttgggaagactgcttacgatctctg 181  Q
    ||| |||| |||||  |||  |||||||||||||||| ||||||||| ||||| ||||| ||||||||    
T  20044982 gaaatgcatcgagaaatgagggctctccgtgggaaagaaaaatttggaaagaccgcttatgatctctg 20044915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 14 - 181
Target Start/End: Complemental strand, 24147897 - 24147730
Alignment:
Q  14 acctgtgatgcatactattccacaaaatgaagaacccatcttccattcagggaacatggaggcctatgatggaatgagtaacttacgagaaaagtatgat 113  Q
    |||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| || ||||| |||||| | ||||||| ||||| ||||||    
T  24147897 acctatgatgcataccattccacaaaatgaagaacccatcttccattcagggaacatggagtccgatgatagaatgaatgacttacgggaaaaatatgat 24147798  T
Q  114 gaactgcaacgagacgtgaaagctctccgtgggaaaggaaaatttgggaagactgcttacgatctctg 181  Q
    ||| |||| |||||  |||  |||||||||||||||| ||||||||| ||||| ||||| ||||||||    
T  24147797 gaaatgcatcgagaaatgagggctctccgtgggaaagaaaaatttggaaagaccgcttatgatctctg 24147730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 14 - 181
Target Start/End: Complemental strand, 620354 - 620187
Alignment:
Q  14 acctgtgatgcatactattccacaaaatgaagaacccatcttccattcagggaacatggaggcctatgatggaatgagtaacttacgagaaaagtatgat 113  Q
    |||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| || ||||| |||||| | |||| || ||||| ||||||    
T  620354 acctatgatgcataccattccacaaaatgaagaacccatcttccattcagggaacatggagcccgatgatagaatgaatgacttgcgggaaaaatatgat 620255  T
Q  114 gaactgcaacgagacgtgaaagctctccgtgggaaaggaaaatttgggaagactgcttacgatctctg 181  Q
    ||| |||| |||||  |||  |||||||||||||||| ||||||||| ||||| ||||| ||||||||    
T  620254 gaaatgcatcgagaaatgagggctctccgtgggaaagaaaaatttggaaagaccgcttatgatctctg 620187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 14 - 181
Target Start/End: Complemental strand, 2411120 - 2410953
Alignment:
Q  14 acctgtgatgcatactattccacaaaatgaagaacccatcttccattcagggaacatggaggcctatgatggaatgagtaacttacgagaaaagtatgat 113  Q
    |||| |||| || ||| ||||||||| ||||||||||||||||||||||||||| ||||||| || |||| || ||| | ||||||  ||||||||||||    
T  2411120 acctatgatccacactgttccacaaattgaagaacccatcttccattcagggaatatggaggtctgtgatagagtgaatgacttacaggaaaagtatgat 2411021  T
Q  114 gaactgcaacgagacgtgaaagctctccgtgggaaaggaaaatttgggaagactgcttacgatctctg 181  Q
    |||||||| |||||  ||| ||||||||||||||||| ||||||||| ||||| ||||||||||||||    
T  2411020 gaactgcagcgagatatgagagctctccgtgggaaagaaaaatttggaaagaccgcttacgatctctg 2410953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 33 - 181
Target Start/End: Original strand, 2411485 - 2411634
Alignment:
Q  33 ccacaaaatgaagaacccatcttccattcagggaacatggaggcctatgatggaatgagtaacttacgagaaaagtatgatgaactgcaacgagacgtga 132  Q
    |||||||||||||||| |||||||||||||||||| ||||||| || |||| || ||| | ||||||  |||||||||||||||||||| |||||  |||    
T  2411485 ccacaaaatgaagaactcatcttccattcagggaatatggaggtctgtgatagagtgaatgacttacaggaaaagtatgatgaactgcagcgagatatga 2411584  T
Q  133 aagctctccgtgggaaa-ggaaaatttgggaagactgcttacgatctctg 181  Q
     |||||| |||||||||   ||||||||| ||||| ||||||||||||||    
T  2411585 gagctcttcgtgggaaataaaaaatttggaaagaccgcttacgatctctg 2411634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 14 - 181
Target Start/End: Complemental strand, 20055324 - 20055157
Alignment:
Q  14 acctgtgatgcatactattccacaaaatgaagaacccatcttccattcagggaacatggaggcctatgatggaatgagtaacttacgagaaaagtatgat 113  Q
    |||||| || ||||| |||||||||||||||||||| |||||||||||||||||||||||  || ||||| || ||| | |||| |  ||||| ||||||    
T  20055324 acctgtaatacataccattccacaaaatgaagaacctatcttccattcagggaacatggaacccgatgatagagtgattgacttgcaggaaaaatatgat 20055225  T
Q  114 gaactgcaacgagacgtgaaagctctccgtgggaaaggaaaatttgggaagactgcttacgatctctg 181  Q
    ||| |||| |||||  |||  |||||||| | || |||||||||||| ||||| ||||||||||||||    
T  20055224 gaaatgcatcgagaaatgagggctctccgcgagagaggaaaatttggaaagaccgcttacgatctctg 20055157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 14 - 181
Target Start/End: Complemental strand, 9140615 - 9140448
Alignment:
Q  14 acctgtgatgcatactattccacaaaatgaagaacccatcttccattcagggaacatggaggcctatgatggaatgagtaacttacgagaaaagtatgat 113  Q
    ||||||||| ||||| ||||| |||| ||||||||| ||||| |||||||||||  | ||||| || || | | | ||  || |||||||||||||||||    
T  9140615 acctgtgatacatacaattccgcaaactgaagaacctatctttcattcagggaatgtagaggcttacgaggaagtaagcgacctacgagaaaagtatgat 9140516  T
Q  114 gaactgcaacgagacgtgaaagctctccgtgggaaaggaaaatttgggaagactgcttacgatctctg 181  Q
    ||||| |  |||||| ||||||| |||||||  ||||| ||||||||||||||||| |||||||||||    
T  9140515 gaactacgccgagacatgaaagccctccgtgaaaaagggaaatttgggaagactgcgtacgatctctg 9140448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 14 - 181
Target Start/End: Complemental strand, 16822212 - 16822045
Alignment:
Q  14 acctgtgatgcatactattccacaaaatgaagaacccatcttccattcagggaacatggaggcctatgatggaatgagtaacttacgagaaaagtatgat 113  Q
    ||||||||||||||| ||||| |||| |||||| || ||||| |||||| ||||    ||||| || || ||| | ||  |  |||||||||||||||||    
T  16822212 acctgtgatgcatacaattccgcaaactgaagagcctatctttcattcaaggaatgcagaggcttacgagggagtaagcgatctacgagaaaagtatgat 16822113  T
Q  114 gaactgcaacgagacgtgaaagctctccgtgggaaaggaaaatttgggaagactgcttacgatctctg 181  Q
    ||||| |  |||||| ||||||||||||||||||||| ||||||||| ||||| ||||| ||||||||    
T  16822112 gaactacgccgagacatgaaagctctccgtgggaaagaaaaatttggaaagaccgcttatgatctctg 16822045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 97 - 181
Target Start/End: Original strand, 27513102 - 27513186
Alignment:
Q  97 tacgagaaaagtatgatgaactgcaacgagacgtgaaagctctccgtgggaaaggaaaatttgggaagactgcttacgatctctg 181  Q
    |||||||||||||||||||||| |  |||||| |||||||||||| ||  ||||| ||||||||||||||||| |||||||||||    
T  27513102 tacgagaaaagtatgatgaactacgccgagacatgaaagctctccatgaaaaagggaaatttgggaagactgcgtacgatctctg 27513186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 14 - 181
Target Start/End: Complemental strand, 21480389 - 21480222
Alignment:
Q  14 acctgtgatgcatactattccacaaaatgaagaacccatcttccattcagggaacatggaggcctatgatggaatgagtaacttacgagaaaagtatgat 113  Q
    |||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| || ||||| |||||| | ||||||| ||||| ||||||    
T  21480389 acctatgatgcataccattccacaaaatgaagaacccatcttccattcagggaacatggagcccgatgatagaatgaatgacttacgggaaaaatatgat 21480290  T
Q  114 gaactgcaacgagacgtgaaagctctccgtgggaaaggaaaatttgggaagactgcttacgatctctg 181  Q
    ||| |||| |||||  |||  |||||||||||||||| ||||||||| |||||  |||| ||||||||    
T  21480289 gaaatgcatcgagaaatgagggctctccgtgggaaagaaaaatttggaaagaccacttatgatctctg 21480222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 88; Significance: 2e-42; HSPs: 13)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 14 - 181
Target Start/End: Original strand, 6197473 - 6197640
Alignment:
Q  14 acctgtgatgcatactattccacaaaatgaagaacccatcttccattcagggaacatggaggcctatgatggaatgagtaacttacgagaaaagtatgat 113  Q
    |||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| || ||||| |||||| | ||||||| ||||| ||||||    
T  6197473 acctatgatgcataccattccacaaaatgaagaacccatcttccattcagggaacatggagcccaatgatagaatgaatgacttacgggaaaaatatgat 6197572  T
Q  114 gaactgcaacgagacgtgaaagctctccgtgggaaaggaaaatttgggaagactgcttacgatctctg 181  Q
    ||| |||| |||||  |||  |||||||||||||||| ||||||||| |||||  |||| ||||||||    
T  6197573 gaaatgcatcgagaaatgagggctctccgtgggaaagaaaaatttggaaagaccacttatgatctctg 6197640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 14 - 181
Target Start/End: Complemental strand, 15534323 - 15534156
Alignment:
Q  14 acctgtgatgcatactattccacaaaatgaagaacccatcttccattcagggaacatggaggcctatgatggaatgagtaacttacgagaaaagtatgat 113  Q
    |||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| || ||||| |||||| | |||| |  ||||| ||||||    
T  15534323 acctatgatgcataccattccacaaaatgaagaacccatcttccattcagggaacatggagcccgatgatagaatgaatgacttgcaggaaaaatatgat 15534224  T
Q  114 gaactgcaacgagacgtgaaagctctccgtgggaaaggaaaatttgggaagactgcttacgatctctg 181  Q
    ||| |||| |||||  |||  ||||||||||||||| |||||||||| ||||| ||||| ||||||||    
T  15534223 gaaatgcatcgagaaatgagggctctccgtgggaaaagaaaatttggaaagaccgcttatgatctctg 15534156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 14 - 181
Target Start/End: Original strand, 8619513 - 8619680
Alignment:
Q  14 acctgtgatgcatactattccacaaaatgaagaacccatcttccattcagggaacatggaggcctatgatggaatgagtaacttacgagaaaagtatgat 113  Q
    |||| ||| |||||| |||||| |||||||||||||||||||||||||||||||||||||| || ||||| |||||| | |||| || ||||| ||||||    
T  8619513 acctatgacgcataccattccataaaatgaagaacccatcttccattcagggaacatggagcccgatgatagaatgaatgacttgcgggaaaaatatgat 8619612  T
Q  114 gaactgcaacgagacgtgaaagctctccgtgggaaaggaaaatttgggaagactgcttacgatctctg 181  Q
    ||| |||| |||||  |||  |||||||||||||||| ||||||||| ||||| ||||| ||||||||    
T  8619613 gaaatgcatcgagaaatgagggctctccgtgggaaagaaaaatttggaaagaccgcttatgatctctg 8619680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 33 - 181
Target Start/End: Original strand, 8807408 - 8807556
Alignment:
Q  33 ccacaaaatgaagaacccatcttccattcagggaacatggaggcctatgatggaatgagtaacttacgagaaaagtatgatgaactgcaacgagacgtga 132  Q
    |||||||||||||||||||||||||||||||||||||||||| || ||||| || ||| | |||| || ||||| ||||||||| |||| ||||| ||||    
T  8807408 ccacaaaatgaagaacccatcttccattcagggaacatggagcccgatgatagagtgaatgacttgcgggaaaaatatgatgaaatgcatcgagaagtga 8807507  T
Q  133 aagctctccgtgggaaaggaaaatttgggaagactgcttacgatctctg 181  Q
      |||||||  ||||||| ||||||||| ||||| ||||| ||||||||    
T  8807508 gggctctcctcgggaaagaaaaatttggaaagaccgcttatgatctctg 8807556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 33 - 172
Target Start/End: Original strand, 21610838 - 21610977
Alignment:
Q  33 ccacaaaatgaagaacccatcttccattcagggaacatggaggcctatgatggaatgagtaacttacgagaaaagtatgatgaactgcaacgagacgtga 132  Q
    |||||||||||||||||||||||||||||||||||||||||| || ||||| || ||| | |||| || ||||| ||||||||| |||| ||||| ||||    
T  21610838 ccacaaaatgaagaacccatcttccattcagggaacatggagcccgatgatagagtgaatgacttgcgggaaaaatatgatgaaatgcatcgagaagtga 21610937  T
Q  133 aagctctccgtgggaaaggaaaatttgggaagactgctta 172  Q
      |||||||  ||||||| ||||||||| ||||| |||||    
T  21610938 gggctctcctcgggaaagaaaaatttggaaagaccgctta 21610977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 14 - 181
Target Start/End: Complemental strand, 5955169 - 5955002
Alignment:
Q  14 acctgtgatgcatactattccacaaaatgaagaacccatcttccattcagggaacatggaggcctatgatggaatgagtaacttacgagaaaagtatgat 113  Q
    ||||||||| ||||| || || |||| ||||||||| ||||| |||||||||||  | ||||| || || | | | ||  || |||||||||||||||||    
T  5955169 acctgtgatacatacaatcccgcaaactgaagaacctatctttcattcagggaatgtagaggcttacgaggaagtaagcgacctacgagaaaagtatgat 5955070  T
Q  114 gaactgcaacgagacgtgaaagctctccgtgggaaaggaaaatttgggaagactgcttacgatctctg 181  Q
    ||||| |  |||||| ||||||| |||||||  ||||| ||||||||||||||||| |||||||||||    
T  5955069 gaactacgccgagacatgaaagccctccgtgaaaaagggaaatttgggaagactgcgtacgatctctg 5955002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 14 - 181
Target Start/End: Complemental strand, 37260980 - 37260813
Alignment:
Q  14 acctgtgatgcatactattccacaaaatgaagaacccatcttccattcagggaacatggaggcctatgatggaatgagtaacttacgagaaaagtatgat 113  Q
    ||||||||| ||||| ||||| |||| ||||||||| ||||| |||||| ||||  | ||||| || || | | | ||  || |||||||||||||||||    
T  37260980 acctgtgatacatacaattccgcaaactgaagaacctatctttcattcaaggaatgtagaggcttacgaggaagtaagcgacctacgagaaaagtatgat 37260881  T
Q  114 gaactgcaacgagacgtgaaagctctccgtgggaaaggaaaatttgggaagactgcttacgatctctg 181  Q
    ||||| |  |||||| ||||||| |||||||  ||||| ||||||||||||||||| |||||||||||    
T  37260880 gaactacgccgagacatgaaagccctccgtgaaaaagggaaatttgggaagactgcgtacgatctctg 37260813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 14 - 178
Target Start/End: Complemental strand, 46397697 - 46397533
Alignment:
Q  14 acctgtgatgcatactattccacaaaatgaagaacccatcttccattcagggaacatggaggcctatgatggaatgagtaacttacgagaaaagtatgat 113  Q
    ||||||||||||||| ||||| |||| |||||| || ||||| |||||| ||||    ||||| || || ||| | ||  |  |||||||||||||||||    
T  46397697 acctgtgatgcatacaattccgcaaactgaagagcctatctttcattcaaggaatgcagaggcttacgagggagtaagcgatctacgagaaaagtatgat 46397598  T
Q  114 gaactgcaacgagacgtgaaagctctccgtgggaaaggaaaatttgggaagactgcttacgatct 178  Q
    ||||| |  |||||| ||||||||||||| | || |||||||||||| ||||| |||||||||||    
T  46397597 gaactacgccgagacatgaaagctctccgcgagagaggaaaatttggaaagaccgcttacgatct 46397533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 14 - 77
Target Start/End: Original strand, 15914485 - 15914548
Alignment:
Q  14 acctgtgatgcatactattccacaaaatgaagaacccatcttccattcagggaacatggaggcc 77  Q
    |||||||||||||||||||||||||| ||||||||| || |||||||||||||| |||||||||    
T  15914485 acctgtgatgcatactattccacaaagtgaagaaccaattttccattcagggaatatggaggcc 15914548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 14 - 77
Target Start/End: Complemental strand, 15597236 - 15597173
Alignment:
Q  14 acctgtgatgcatactattccacaaaatgaagaacccatcttccattcagggaacatggaggcc 77  Q
    ||||||||||||||| |||||||||| ||||||||| || |||||||||||||| |||||||||    
T  15597236 acctgtgatgcatacaattccacaaagtgaagaaccaattttccattcagggaatatggaggcc 15597173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 97 - 181
Target Start/End: Original strand, 46376304 - 46376388
Alignment:
Q  97 tacgagaaaagtatgatgaactgcaacgagacgtgaaagctctccgtgggaaaggaaaatttgggaagactgcttacgatctctg 181  Q
    ||||||| |||||||||||||| |  |||||| |||||||||||| ||  ||||| ||||| ||||||||||| |||||||||||    
T  46376304 tacgagagaagtatgatgaactacgccgagacatgaaagctctccatgaaaaagggaaattcgggaagactgcgtacgatctctg 46376388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 81
Target Start/End: Original strand, 20439101 - 20439150
Alignment:
Q  32 tccacaaaatgaagaacccatcttccattcagggaacatggaggcctatg 81  Q
    ||||||||||||||||||||||||||||||| |||  ||| |||||||||    
T  20439101 tccacaaaatgaagaacccatcttccattcaaggagtatgaaggcctatg 20439150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 130 - 181
Target Start/End: Complemental strand, 15597120 - 15597069
Alignment:
Q  130 tgaaagctctccgtgggaaaggaaaatttgggaagactgcttacgatctctg 181  Q
    |||||||||||||||||||||  || ||||||||||| || |||||||||||    
T  15597120 tgaaagctctccgtgggaaagagaagtttgggaagaccgcctacgatctctg 15597069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0441 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0441
Description:

Target: scaffold0441; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 14 - 181
Target Start/End: Original strand, 10109 - 10276
Alignment:
Q  14 acctgtgatgcatactattccacaaaatgaagaacccatcttccattcagggaacatggaggcctatgatggaatgagtaacttacgagaaaagtatgat 113  Q
    |||| |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| || ||||| || ||| | |||| || ||||| ||||||    
T  10109 acctatgatgcataccattccacaaaatgaagaacccatattccattcagggaacatggagcccgatgatagagtgaatgacttgcgggaaaaatatgat 10208  T
Q  114 gaactgcaacgagacgtgaaagctctccgtgggaaaggaaaatttgggaagactgcttacgatctctg 181  Q
    ||| |||| |||||  |||  |||||||||||||||| ||||||||| ||||| ||||| ||||||||    
T  10209 gaaatgcatcgagaaatgagggctctccgtgggaaagaaaaatttggaaagaccgcttatgatctctg 10276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 72; Significance: 6e-33; HSPs: 5)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 14 - 181
Target Start/End: Complemental strand, 15899956 - 15899789
Alignment:
Q  14 acctgtgatgcatactattccacaaaatgaagaacccatcttccattcagggaacatggaggcctatgatggaatgagtaacttacgagaaaagtatgat 113  Q
    |||| |||||||||| ||||||||||||||||||||||||||||| ||||||||| |||||||| ||||| || ||  | |||| |  ||||| |||||     
T  15899956 acctatgatgcataccattccacaaaatgaagaacccatcttccactcagggaacgtggaggccgatgatagagtggatgacttgcaggaaaaatatgac 15899857  T
Q  114 gaactgcaacgagacgtgaaagctctccgtgggaaaggaaaatttgggaagactgcttacgatctctg 181  Q
    ||| |||| |||||  |||  |||||||||||||||||| ||||||| ||||| ||||||||||||||    
T  15899856 gaaatgcatcgagaaatgagggctctccgtgggaaaggataatttggaaagaccgcttacgatctctg 15899789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 15 - 181
Target Start/End: Original strand, 14920423 - 14920589
Alignment:
Q  15 cctgtgatgcatactattccacaaaatgaagaacccatcttccattcagggaacatggaggcctatgatggaatgagtaacttacgagaaaagtatgatg 114  Q
    ||||| |||||||| |||||||||||||||||||| |||||||||||||||||||||||  || ||||| || ||| | |||| |  ||||| |||||||    
T  14920423 cctgtaatgcataccattccacaaaatgaagaacctatcttccattcagggaacatggaacccgatgatagagtgattgacttgcaggaaaaatatgatg 14920522  T
Q  115 aactgcaacgagacgtgaaagctctccgtgggaaaggaaaatttgggaagactgcttacgatctctg 181  Q
    || |||| |||||  |||  |||||||||||||||| ||||||||| ||||| ||||| ||||||||    
T  14920523 aaatgcatcgagaaatgagggctctccgtgggaaagaaaaatttggaaagaccgcttatgatctctg 14920589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 33 - 178
Target Start/End: Complemental strand, 16725240 - 16725095
Alignment:
Q  33 ccacaaaatgaagaacccatcttccattcagggaacatggaggcctatgatggaatgagtaacttacgagaaaagtatgatgaactgcaacgagacgtga 132  Q
    |||||||||||||||||||||||||||||||||||||||||| || |||||  ||||| | |||| || ||||| ||||||||| |||| |||||  |||    
T  16725240 ccacaaaatgaagaacccatcttccattcagggaacatggagcccgatgataaaatgaatgacttgcgggaaaaatatgatgaaatgcatcgagaaatga 16725141  T
Q  133 aagctctccgtgggaaaggaaaatttgggaagactgcttacgatct 178  Q
      |||||||||||||||| ||||||||| ||||| ||||| |||||    
T  16725140 gggctctccgtgggaaagaaaaatttggaaagaccgcttatgatct 16725095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 33 - 181
Target Start/End: Original strand, 22707042 - 22707190
Alignment:
Q  33 ccacaaaatgaagaacccatcttccattcagggaacatggaggcctatgatggaatgagtaacttacgagaaaagtatgatgaactgcaacgagacgtga 132  Q
    |||||||||||||||||||||||||||||||||||||||||  || ||||| || ||| | |||| || ||||| ||||||||| |||| ||||| ||||    
T  22707042 ccacaaaatgaagaacccatcttccattcagggaacatggaacccgatgatagagtgaatgacttgcgggaaaaatatgatgaaatgcatcgagaagtga 22707141  T
Q  133 aagctctccgtgggaaaggaaaatttgggaagactgcttacgatctctg 181  Q
      |||||||  ||||||| ||||||||| ||||| ||||| ||||||||    
T  22707142 gggctctcctcgggaaagaaaaatttggaaagaccgcttatgatctctg 22707190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 97 - 181
Target Start/End: Original strand, 18039416 - 18039500
Alignment:
Q  97 tacgagaaaagtatgatgaactgcaacgagacgtgaaagctctccgtgggaaaggaaaatttgggaagactgcttacgatctctg 181  Q
    |||||||||||||||||||||| |  |||||| |||||||||||| ||  ||||| ||||||||||||||||| |||||||||||    
T  18039416 tacgagaaaagtatgatgaactacgccgagacatgaaagctctccatgaaaaagggaaatttgggaagactgcgtacgatctctg 18039500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0551 (Bit Score: 68; Significance: 1e-30; HSPs: 2)
Name: scaffold0551
Description:

Target: scaffold0551; HSP #1
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 14 - 181
Target Start/End: Complemental strand, 4451 - 4284
Alignment:
Q  14 acctgtgatgcatactattccacaaaatgaagaacccatcttccattcagggaacatggaggcctatgatggaatgagtaacttacgagaaaagtatgat 113  Q
    |||||| |||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| ||||| || ||  | ||||    ||||| ||||||    
T  4451 acctgtaatgcataccattccataaaatgaagaacccatcttccattcagggaacatggaggccgatgatagagtggatgacttgtaggaaaaatatgat 4352  T
Q  114 gaactgcaacgagacgtgaaagctctccgtgggaaaggaaaatttgggaagactgcttacgatctctg 181  Q
    ||| |||| |||||  |||  ||||||||||||| |||||||||||| || || |||||| |||||||    
T  4351 gaaatgcatcgagaaatgagggctctccgtgggagaggaaaatttggaaaaaccgcttacaatctctg 4284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0551; HSP #2
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 14 - 181
Target Start/End: Complemental strand, 10565 - 10398
Alignment:
Q  14 acctgtgatgcatactattccacaaaatgaagaacccatcttccattcagggaacatggaggcctatgatggaatgagtaacttacgagaaaagtatgat 113  Q
    |||||| |||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| ||||| || ||  | ||||    ||||| ||||||    
T  10565 acctgtaatgcataccattccataaaatgaagaacccatcttccattcagggaacatggaggccgatgatagagtggatgacttgtaggaaaaatatgat 10466  T
Q  114 gaactgcaacgagacgtgaaagctctccgtgggaaaggaaaatttgggaagactgcttacgatctctg 181  Q
    ||| |||| |||||  |||  ||||||||||||| |||||||||||| || || |||||| |||||||    
T  10465 gaaatgcatcgagaaatgagggctctccgtgggagaggaaaatttggaaaaaccgcttacaatctctg 10398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0435 (Bit Score: 65; Significance: 9e-29; HSPs: 2)
Name: scaffold0435
Description:

Target: scaffold0435; HSP #1
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 14 - 178
Target Start/End: Complemental strand, 13117 - 12953
Alignment:
Q  14 acctgtgatgcatactattccacaaaatgaagaacccatcttccattcagggaacatggaggcctatgatggaatgagtaacttacgagaaaagtatgat 113  Q
    ||||||||||||||||||||||||||||||||||| | | |||||||||||||||||||| |||| ||||  | ||| | |||| |  ||||| |||||     
T  13117 acctgtgatgcatactattccacaaaatgaagaactcgttttccattcagggaacatggaagcctgtgatatagtgaatgacttgcaggaaaaatatgac 13018  T
Q  114 gaactgcaacgagacgtgaaagctctccgtgggaaaggaaaatttgggaagactgcttacgatct 178  Q
    ||| |||| ||||| ||||  |||||| ||| || |||||||||||| ||||| |||||||||||    
T  13017 gaaatgcatcgagaagtgagggctctctgtgagagaggaaaatttggaaagaccgcttacgatct 12953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0435; HSP #2
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 14 - 178
Target Start/End: Complemental strand, 13793 - 13629
Alignment:
Q  14 acctgtgatgcatactattccacaaaatgaagaacccatcttccattcagggaacatggaggcctatgatggaatgagtaacttacgagaaaagtatgat 113  Q
    ||||||||||||||||||||||||||||||||||| | | |||||||||||||||||||| |||| ||||  | ||| | |||| |  ||||| |||||     
T  13793 acctgtgatgcatactattccacaaaatgaagaactcgttttccattcagggaacatggaagcctgtgatatagtgaatgacttgcaggaaaaatatgac 13694  T
Q  114 gaactgcaacgagacgtgaaagctctccgtgggaaaggaaaatttgggaagactgcttacgatct 178  Q
    ||| |||| ||||| ||||  |||||| ||| || |||||||||||| ||||| |||||||||||    
T  13693 gaaatgcatcgagaagtgagggctctctgtgagagaggaaaatttggaaagaccgcttacgatct 13629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 58; Significance: 1e-24; HSPs: 2)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 14 - 83
Target Start/End: Complemental strand, 36598 - 36529
Alignment:
Q  14 acctgtgatgcatactattccacaaaatgaagaacccatcttccattcagggaacatggaggcctatgat 83  Q
    ||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| |||||    
T  36598 acctgtgatgcataccattccacaaaatgaagaacccatcttccactcagggaacatggaggccgatgat 36529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 102 - 181
Target Start/End: Complemental strand, 29471 - 29392
Alignment:
Q  102 gaaaagtatgatgaactgcaacgagacgtgaaagctctccgtgggaaaggaaaatttgggaagactgcttacgatctctg 181  Q
    ||||| ||||| ||| |||| |||||  |||  |||||||||||||||||||||||||| ||||| ||||||||||||||    
T  29471 gaaaaatatgacgaaatgcatcgagaaatgagggctctccgtgggaaaggaaaatttggaaagaccgcttacgatctctg 29392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 14 - 181
Target Start/End: Original strand, 301852 - 302019
Alignment:
Q  14 acctgtgatgcatactattccacaaaatgaagaacccatcttccattcagggaacatggaggcctatgatggaatgagtaacttacgagaaaagtatgat 113  Q
    ||||||||| ||||| || || |||| ||||||||| ||||| |||||||||||  | ||||| || || | | | ||  || |||||||||||||||||    
T  301852 acctgtgatacatacaatcccgcaaactgaagaacctatctttcattcagggaatgtagaggcttacgaggaagtaagcgacctacgagaaaagtatgat 301951  T
Q  114 gaactgcaacgagacgtgaaagctctccgtgggaaaggaaaatttgggaagactgcttacgatctctg 181  Q
    ||||| |  |||||| ||||||| |||||||  ||||| ||||||||||||||||| |||||||||||    
T  301952 gaactacgccgagacatgaaagccctccgtgaaaaagggaaatttgggaagactgcgtacgatctctg 302019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 56; Significance: 2e-23; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 14 - 181
Target Start/End: Original strand, 22945341 - 22945508
Alignment:
Q  14 acctgtgatgcatactattccacaaaatgaagaacccatcttccattcagggaacatggaggcctatgatggaatgagtaacttacgagaaaagtatgat 113  Q
    ||||||||| ||||| ||||| |||| |||||| || ||||| |||||||||||    ||||| || || ||| | ||  || |||||||||||||||||    
T  22945341 acctgtgatacatacaattccgcaaactgaagagcctatctttcattcagggaatgcagaggcttacgagggagtaagcgacctacgagaaaagtatgat 22945440  T
Q  114 gaactgcaacgagacgtgaaagctctccgtgggaaaggaaaatttgggaagactgcttacgatctctg 181  Q
    ||||| |  |||||| |||||||||||| ||  ||||| ||||||||||||||||| |||||||||||    
T  22945441 gaactacgccgagacatgaaagctctccatgaaaaagggaaatttgggaagactgcgtacgatctctg 22945508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 97 - 181
Target Start/End: Original strand, 12379689 - 12379773
Alignment:
Q  97 tacgagaaaagtatgatgaactgcaacgagacgtgaaagctctccgtgggaaaggaaaatttgggaagactgcttacgatctctg 181  Q
    |||||||||||||||| ||||| |  |||||| ||||||| |||||||  ||||| ||||||||||||||||| |||||||||||    
T  12379689 tacgagaaaagtatgacgaactacgccgagacatgaaagccctccgtgaaaaagggaaatttgggaagactgcgtacgatctctg 12379773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 52; Significance: 5e-21; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 14 - 181
Target Start/End: Original strand, 25109 - 25276
Alignment:
Q  14 acctgtgatgcatactattccacaaaatgaagaacccatcttccattcagggaacatggaggcctatgatggaatgagtaacttacgagaaaagtatgat 113  Q
    ||||||||| ||||| ||||| |||| |||||| || ||||| |||||||||||    ||||| || || | | | ||  || |||||||||||||||||    
T  25109 acctgtgatacatacaattccgcaaactgaagagcctatctttcattcagggaatgcagaggcttacgaggaagtaagcgacctacgagaaaagtatgat 25208  T
Q  114 gaactgcaacgagacgtgaaagctctccgtgggaaaggaaaatttgggaagactgcttacgatctctg 181  Q
    ||||| |  |||||| |||||||||||| ||  ||||| ||||||||||||||||| |||||||||||    
T  25209 gaactacgccgagacatgaaagctctccatgaaaaagggaaatttgggaagactgcgtacgatctctg 25276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0094 (Bit Score: 48; Significance: 1e-18; HSPs: 2)
Name: scaffold0094
Description:

Target: scaffold0094; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 14 - 77
Target Start/End: Complemental strand, 39585 - 39522
Alignment:
Q  14 acctgtgatgcatactattccacaaaatgaagaacccatcttccattcagggaacatggaggcc 77  Q
    |||||||||||||||||||||||||| ||||||||| || |||||||||||||| |||||||||    
T  39585 acctgtgatgcatactattccacaaagtgaagaaccaattttccattcagggaatatggaggcc 39522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0094; HSP #2
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 130 - 181
Target Start/End: Complemental strand, 39469 - 39418
Alignment:
Q  130 tgaaagctctccgtgggaaaggaaaatttgggaagactgcttacgatctctg 181  Q
    |||||||||||||||||||||  || ||||||||||| || |||||||||||    
T  39469 tgaaagctctccgtgggaaagagaagtttgggaagaccgcctacgatctctg 39418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0595 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0595
Description:

Target: scaffold0595; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 97 - 183
Target Start/End: Original strand, 9006 - 9092
Alignment:
Q  97 tacgagaaaagtatgatgaactgcaacgagacgtgaaagctctccgtgggaaaggaaaatttgggaagactgcttacgatctctgct 183  Q
    ||||||| |||||||||||||| |  |||||| ||||||| |||| ||  ||||| ||||| ||||||||||| |||||||||||||    
T  9006 tacgagagaagtatgatgaactacgccgagacatgaaagccctccatgaaaaagggaaattcgggaagactgcgtacgatctctgct 9092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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