View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8451_low_8 (Length: 263)
Name: NF8451_low_8
Description: NF8451
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8451_low_8 |
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Alignment Details
Target: chr6 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 27 - 246
Target Start/End: Complemental strand, 32380387 - 32380168
Alignment:
| Q |
27 |
agcttaggtgtctctgatgagcagttacttttcttaaactatgttgatgttaatttccaagcttttgatacaaaggaaacaatagcttcaacacatatta |
126 |
Q |
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| T |
32380387 |
agcttaggtgtctctgatgagcagttacttttcttaaactatgttgatgttaatttccaagcttttgatacaaaggaaacaatagcttcaacacatattt |
32380288 |
T |
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| Q |
127 |
gttagatttttctgttgcctcttataacatgcctctgacgtctctgcagttaggatgctatgtgccgtgcgaaaattgtgttctttcagctgtggatatc |
226 |
Q |
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||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
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| T |
32380287 |
gttagatttttctgttgcctcttataatatgcctctgacgtctctgcagttaggatgctatgtgccgtgcgaaaattgtgttctttcagttgtggatatc |
32380188 |
T |
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| Q |
227 |
atcttcacacgccttggagc |
246 |
Q |
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|||||||||||||||||||| |
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| T |
32380187 |
atcttcacacgccttggagc |
32380168 |
T |
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