View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8452_high_13 (Length: 238)

Name: NF8452_high_13
Description: NF8452
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8452_high_13
NF8452_high_13
[»] chr6 (13 HSPs)
chr6 (1-204)||(23282805-23283008)
chr6 (1-168)||(23289184-23289352)
chr6 (167-204)||(7772176-7772213)
chr6 (167-204)||(7847308-7847345)
chr6 (165-204)||(2090656-2090695)
chr6 (167-204)||(402621-402658)
chr6 (167-204)||(13901641-13901678)
chr6 (167-204)||(15498629-15498666)
chr6 (167-204)||(23604460-23604497)
chr6 (167-204)||(25045643-25045680)
chr6 (167-204)||(34915543-34915580)
chr6 (164-200)||(2364406-2364442)
chr6 (170-202)||(2665727-2665759)
[»] chr8 (19 HSPs)
chr8 (159-204)||(2152240-2152285)
chr8 (167-204)||(5774048-5774085)
chr8 (166-204)||(18641380-18641418)
chr8 (166-204)||(31619248-31619286)
chr8 (167-201)||(35179600-35179634)
chr8 (166-204)||(36177103-36177141)
chr8 (166-204)||(37023284-37023322)
chr8 (167-200)||(2151980-2152013)
chr8 (167-204)||(5162304-5162341)
chr8 (165-202)||(6050557-6050594)
chr8 (167-204)||(8566202-8566239)
chr8 (167-204)||(12802611-12802648)
chr8 (167-204)||(17069844-17069881)
chr8 (167-204)||(17578392-17578429)
chr8 (167-200)||(23719281-23719314)
chr8 (167-204)||(33980465-33980502)
chr8 (163-200)||(35504315-35504352)
chr8 (167-204)||(43654203-43654240)
chr8 (167-204)||(44748463-44748500)
[»] chr7 (11 HSPs)
chr7 (167-204)||(12930318-12930355)
chr7 (167-204)||(18751982-18752019)
chr7 (167-201)||(7607635-7607669)
chr7 (167-201)||(9682602-9682636)
chr7 (167-204)||(2290016-2290053)
chr7 (167-204)||(25247690-25247727)
chr7 (167-204)||(34012517-34012554)
chr7 (167-204)||(34979077-34979114)
chr7 (167-200)||(35888574-35888607)
chr7 (167-204)||(46148431-46148468)
chr7 (167-203)||(33381574-33381610)
[»] chr3 (17 HSPs)
chr3 (167-204)||(8503505-8503542)
chr3 (161-201)||(36584704-36584744)
chr3 (166-201)||(4564236-4564271)
chr3 (166-201)||(20621687-20621722)
chr3 (166-204)||(47008502-47008540)
chr3 (167-201)||(49383344-49383378)
chr3 (167-204)||(1450242-1450279)
chr3 (167-204)||(4759351-4759388)
chr3 (167-204)||(8321925-8321962)
chr3 (167-204)||(24087335-24087372)
chr3 (167-204)||(26221288-26221325)
chr3 (167-204)||(30819878-30819915)
chr3 (167-204)||(35572454-35572491)
chr3 (167-204)||(41392880-41392917)
chr3 (167-204)||(46845492-46845529)
chr3 (167-204)||(49383833-49383870)
chr3 (160-204)||(14428603-14428647)
[»] chr2 (12 HSPs)
chr2 (167-204)||(11865289-11865326)
chr2 (167-204)||(26334845-26334882)
chr2 (166-201)||(40789091-40789126)
chr2 (166-204)||(8912874-8912912)
chr2 (167-201)||(13598522-13598556)
chr2 (162-204)||(16108475-16108517)
chr2 (167-204)||(2060316-2060353)
chr2 (167-200)||(6028606-6028639)
chr2 (167-204)||(7116299-7116336)
chr2 (167-204)||(26322293-26322330)
chr2 (167-204)||(28566151-28566188)
chr2 (167-204)||(38121511-38121548)
[»] chr1 (14 HSPs)
chr1 (167-204)||(18237094-18237131)
chr1 (166-204)||(26768385-26768423)
chr1 (167-201)||(29437857-29437891)
chr1 (166-204)||(33336800-33336838)
chr1 (167-204)||(1427199-1427236)
chr1 (166-199)||(6129917-6129950)
chr1 (167-204)||(7763749-7763786)
chr1 (167-204)||(25509209-25509246)
chr1 (167-204)||(27037269-27037306)
chr1 (167-204)||(42276161-42276198)
chr1 (167-204)||(43456621-43456658)
chr1 (171-204)||(45285810-45285843)
chr1 (167-204)||(47754017-47754054)
chr1 (167-199)||(45943978-45944010)
[»] chr4 (20 HSPs)
chr4 (160-204)||(49373693-49373737)
chr4 (167-201)||(13548980-13549014)
chr4 (166-204)||(15241479-15241517)
chr4 (167-201)||(30050087-30050121)
chr4 (166-204)||(53564356-53564394)
chr4 (167-204)||(4415965-4416002)
chr4 (167-204)||(20455181-20455218)
chr4 (167-204)||(25124246-25124283)
chr4 (167-204)||(28501386-28501423)
chr4 (167-204)||(29520164-29520201)
chr4 (167-204)||(31937076-31937113)
chr4 (167-204)||(46949992-46950029)
chr4 (167-204)||(49793091-49793128)
chr4 (166-203)||(55563128-55563165)
chr4 (167-204)||(56432518-56432555)
chr4 (172-204)||(4549889-4549921)
chr4 (167-203)||(6462691-6462727)
chr4 (165-201)||(23623899-23623935)
chr4 (167-203)||(32899219-32899255)
chr4 (167-203)||(37639888-37639924)
[»] scaffold0674 (1 HSPs)
scaffold0674 (166-204)||(5150-5188)
[»] scaffold0549 (1 HSPs)
scaffold0549 (166-204)||(10182-10220)
[»] scaffold0240 (1 HSPs)
scaffold0240 (166-204)||(18496-18534)
[»] scaffold0161 (1 HSPs)
scaffold0161 (166-204)||(3437-3475)
[»] scaffold0107 (1 HSPs)
scaffold0107 (166-204)||(48653-48691)
[»] chr5 (10 HSPs)
chr5 (166-204)||(23286474-23286512)
chr5 (167-201)||(24857556-24857590)
chr5 (167-201)||(39971014-39971048)
chr5 (158-204)||(40004409-40004455)
chr5 (166-204)||(43060411-43060449)
chr5 (167-204)||(3028013-3028050)
chr5 (167-204)||(8949812-8949849)
chr5 (167-204)||(15190815-15190852)
chr5 (166-203)||(19571940-19571977)
chr5 (167-204)||(23260138-23260175)
[»] scaffold0457 (1 HSPs)
scaffold0457 (167-204)||(4663-4700)
[»] scaffold0074 (1 HSPs)
scaffold0074 (170-202)||(55930-55962)


Alignment Details
Target: chr6 (Bit Score: 184; Significance: 1e-99; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 23283008 - 23282805
Alignment:
Q  1 tcgatgatatacggtgttgagacgtggtgtcagaaattgtgtttaaatgacacaactgcaatatatctatatacaacaagttggatttcaaaaggatttt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23283008 tcgatgatatacggtgttgagacgtggtgtcagaaattgtgtttaaattacacaactgcaatatatctatatacaacaagttggatttcaaaaggatttt 23282909  T
Q  101 taatttgtagcttatatgtgaatataatcacgaatcacgaataaagtgcatcttatctcttttatttactacctccgtccctaaatataagactcttttg 200  Q
    ||||||||||||||||||||||||||||||| ||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  23282908 taatttgtagcttatatgtgaatataatcactaatcaggcataaagtgcatcttatctcttttatttactacctccgtccctaaatataagacccttttg 23282809  T
Q  201 agaa 204  Q
    ||||    
T  23282808 agaa 23282805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 23289352 - 23289184
Alignment:
Q  1 tcgatgatatacggtgttgagacgtggtgtcagaaattgtgtttaaatgacacaactgcaatatatctatatacaacaagttgg-atttcaaaaggattt 99  Q
    ||||||||||  |||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| | ||||||| |||||||||||||||    
T  23289352 tcgatgatatttggtgttgagacgtggtgtcagaaattgtgtttaaattacacaaatgcaatatatctatatactataagttggaatttcaaaaggattt 23289253  T
Q  100 ttaatttgtagcttatatgtgaatataatcacgaatcacgaataaagtgcatcttatctcttttattta 168  Q
    ||||||||||||||||||||||||| |||||| ||||| | |||||||||||||||  |||||||||||    
T  23289252 ttaatttgtagcttatatgtgaatagaatcactaatcaggcataaagtgcatcttacttcttttattta 23289184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 167 - 204
Target Start/End: Original strand, 7772176 - 7772213
Alignment:
Q  167 tactacctccgtccctaaatataagactcttttgagaa 204  Q
    |||||||||||||||||| |||||||||||||||||||    
T  7772176 tactacctccgtccctaattataagactcttttgagaa 7772213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 167 - 204
Target Start/End: Complemental strand, 7847345 - 7847308
Alignment:
Q  167 tactacctccgtccctaaatataagactcttttgagaa 204  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  7847345 tactacctccgtccctaaatataagacccttttgagaa 7847308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 165 - 204
Target Start/End: Original strand, 2090656 - 2090695
Alignment:
Q  165 tttactacctccgtccctaaatataagactcttttgagaa 204  Q
    |||||||||||||||||||| |||||||| ||||||||||    
T  2090656 tttactacctccgtccctaattataagacccttttgagaa 2090695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 204
Target Start/End: Complemental strand, 402658 - 402621
Alignment:
Q  167 tactacctccgtccctaaatataagactcttttgagaa 204  Q
    |||||||||||||||||| |||||||| ||||||||||    
T  402658 tactacctccgtccctaattataagacccttttgagaa 402621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 204
Target Start/End: Original strand, 13901641 - 13901678
Alignment:
Q  167 tactacctccgtccctaaatataagactcttttgagaa 204  Q
    |||||||||||||||||| |||||||| ||||||||||    
T  13901641 tactacctccgtccctaattataagacccttttgagaa 13901678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 204
Target Start/End: Original strand, 15498629 - 15498666
Alignment:
Q  167 tactacctccgtccctaaatataagactcttttgagaa 204  Q
    |||||||||||||||||| |||||||| ||||||||||    
T  15498629 tactacctccgtccctaattataagacccttttgagaa 15498666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 204
Target Start/End: Original strand, 23604460 - 23604497
Alignment:
Q  167 tactacctccgtccctaaatataagactcttttgagaa 204  Q
    |||||||||||||||||| |||||||| ||||||||||    
T  23604460 tactacctccgtccctaattataagacccttttgagaa 23604497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 204
Target Start/End: Complemental strand, 25045680 - 25045643
Alignment:
Q  167 tactacctccgtccctaaatataagactcttttgagaa 204  Q
    |||||||||||||||||| |||||||| ||||||||||    
T  25045680 tactacctccgtccctaattataagacccttttgagaa 25045643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 204
Target Start/End: Complemental strand, 34915580 - 34915543
Alignment:
Q  167 tactacctccgtccctaaatataagactcttttgagaa 204  Q
    |||||||||||||||||| |||||||| ||||||||||    
T  34915580 tactacctccgtccctaattataagacccttttgagaa 34915543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 200
Target Start/End: Original strand, 2364406 - 2364442
Alignment:
Q  164 atttactacctccgtccctaaatataagactcttttg 200  Q
    |||||||||||||||||||||||||| || |||||||    
T  2364406 atttactacctccgtccctaaatataggagtcttttg 2364442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 202
Target Start/End: Complemental strand, 2665759 - 2665727
Alignment:
Q  170 tacctccgtccctaaatataagactcttttgag 202  Q
    ||||||||||||||||||||||||| |||||||    
T  2665759 tacctccgtccctaaatataagacttttttgag 2665727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 34; Significance: 0.0000000003; HSPs: 19)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 159 - 204
Target Start/End: Complemental strand, 2152285 - 2152240
Alignment:
Q  159 cttttatttactacctccgtccctaaatataagactcttttgagaa 204  Q
    ||||||| |||||||||||||||||| |||||||| ||||||||||    
T  2152285 cttttatatactacctccgtccctaattataagacccttttgagaa 2152240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 167 - 204
Target Start/End: Original strand, 5774048 - 5774085
Alignment:
Q  167 tactacctccgtccctaaatataagactcttttgagaa 204  Q
    |||||||||||||||||| |||||||||||||||||||    
T  5774048 tactacctccgtccctaattataagactcttttgagaa 5774085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 204
Target Start/End: Complemental strand, 18641418 - 18641380
Alignment:
Q  166 ttactacctccgtccctaaatataagactcttttgagaa 204  Q
    ||||||||||||||||||| |||||||| ||||||||||    
T  18641418 ttactacctccgtccctaattataagacccttttgagaa 18641380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 204
Target Start/End: Complemental strand, 31619286 - 31619248
Alignment:
Q  166 ttactacctccgtccctaaatataagactcttttgagaa 204  Q
    ||||||||||||||||||||||||||||  |||||||||    
T  31619286 ttactacctccgtccctaaatataagaccattttgagaa 31619248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 201
Target Start/End: Original strand, 35179600 - 35179634
Alignment:
Q  167 tactacctccgtccctaaatataagactcttttga 201  Q
    |||||||||||||||||| ||||||||||||||||    
T  35179600 tactacctccgtccctaattataagactcttttga 35179634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 204
Target Start/End: Complemental strand, 36177141 - 36177103
Alignment:
Q  166 ttactacctccgtccctaaatataagactcttttgagaa 204  Q
    ||||| ||||||||||||| |||||||||||||||||||    
T  36177141 ttactccctccgtccctaattataagactcttttgagaa 36177103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 204
Target Start/End: Complemental strand, 37023322 - 37023284
Alignment:
Q  166 ttactacctccgtccctaaatataagactcttttgagaa 204  Q
    ||||| ||||||||||||| |||||||||||||||||||    
T  37023322 ttactgcctccgtccctaattataagactcttttgagaa 37023284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 200
Target Start/End: Original strand, 2151980 - 2152013
Alignment:
Q  167 tactacctccgtccctaaatataagactcttttg 200  Q
    ||||||||||||||||| ||||||||||||||||    
T  2151980 tactacctccgtccctatatataagactcttttg 2152013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 204
Target Start/End: Original strand, 5162304 - 5162341
Alignment:
Q  167 tactacctccgtccctaaatataagactcttttgagaa 204  Q
    |||||||||||||||||| |||||||| ||||||||||    
T  5162304 tactacctccgtccctaattataagacccttttgagaa 5162341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 165 - 202
Target Start/End: Complemental strand, 6050594 - 6050557
Alignment:
Q  165 tttactacctccgtccctaaatataagactcttttgag 202  Q
    |||||||||||||||||||| |||||||| ||||||||    
T  6050594 tttactacctccgtccctaattataagacccttttgag 6050557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 204
Target Start/End: Original strand, 8566202 - 8566239
Alignment:
Q  167 tactacctccgtccctaaatataagactcttttgagaa 204  Q
    |||||||||||| ||||| |||||||||||||||||||    
T  8566202 tactacctccgttcctaattataagactcttttgagaa 8566239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 204
Target Start/End: Original strand, 12802611 - 12802648
Alignment:
Q  167 tactacctccgtccctaaatataagactcttttgagaa 204  Q
    |||||||||||||||||| |||||||| ||||||||||    
T  12802611 tactacctccgtccctaattataagacccttttgagaa 12802648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 204
Target Start/End: Complemental strand, 17069881 - 17069844
Alignment:
Q  167 tactacctccgtccctaaatataagactcttttgagaa 204  Q
    |||||||||||||||||| |||||||| ||||||||||    
T  17069881 tactacctccgtccctaattataagacccttttgagaa 17069844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 204
Target Start/End: Original strand, 17578392 - 17578429
Alignment:
Q  167 tactacctccgtccctaaatataagactcttttgagaa 204  Q
    |||||||||||||||||| |||||||| ||||||||||    
T  17578392 tactacctccgtccctaattataagacccttttgagaa 17578429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 200
Target Start/End: Original strand, 23719281 - 23719314
Alignment:
Q  167 tactacctccgtccctaaatataagactcttttg 200  Q
    |||||||||||||| |||||||||||||||||||    
T  23719281 tactacctccgtccataaatataagactcttttg 23719314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 204
Target Start/End: Original strand, 33980465 - 33980502
Alignment:
Q  167 tactacctccgtccctaaatataagactcttttgagaa 204  Q
    |||||||||||||||||| ||||||||| |||||||||    
T  33980465 tactacctccgtccctaattataagacttttttgagaa 33980502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 163 - 200
Target Start/End: Original strand, 35504315 - 35504352
Alignment:
Q  163 tatttactacctccgtccctaaatataagactcttttg 200  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  35504315 tatttactccctccgtccctatatataagactcttttg 35504352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 204
Target Start/End: Complemental strand, 43654240 - 43654203
Alignment:
Q  167 tactacctccgtccctaaatataagactcttttgagaa 204  Q
    |||| ||||||||||||| |||||||||||||||||||    
T  43654240 tactccctccgtccctaattataagactcttttgagaa 43654203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 204
Target Start/End: Complemental strand, 44748500 - 44748463
Alignment:
Q  167 tactacctccgtccctaaatataagactcttttgagaa 204  Q
    |||||||||||||||||| ||||||| |||||||||||    
T  44748500 tactacctccgtccctaattataagattcttttgagaa 44748463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 34; Significance: 0.0000000003; HSPs: 11)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 167 - 204
Target Start/End: Original strand, 12930318 - 12930355
Alignment:
Q  167 tactacctccgtccctaaatataagactcttttgagaa 204  Q
    |||||||||||||||||| |||||||||||||||||||    
T  12930318 tactacctccgtccctaattataagactcttttgagaa 12930355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 167 - 204
Target Start/End: Complemental strand, 18752019 - 18751982
Alignment:
Q  167 tactacctccgtccctaaatataagactcttttgagaa 204  Q
    |||||||||||||||||| |||||||||||||||||||    
T  18752019 tactacctccgtccctaattataagactcttttgagaa 18751982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 201
Target Start/End: Complemental strand, 7607669 - 7607635
Alignment:
Q  167 tactacctccgtccctaaatataagactcttttga 201  Q
    ||||||||||||||||||||||||||| |||||||    
T  7607669 tactacctccgtccctaaatataagacccttttga 7607635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 201
Target Start/End: Original strand, 9682602 - 9682636
Alignment:
Q  167 tactacctccgtccctaaatataagactcttttga 201  Q
    |||||||||||||||||| ||||||||||||||||    
T  9682602 tactacctccgtccctaattataagactcttttga 9682636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 204
Target Start/End: Complemental strand, 2290053 - 2290016
Alignment:
Q  167 tactacctccgtccctaaatataagactcttttgagaa 204  Q
    |||||||||||||||||| |||||||| ||||||||||    
T  2290053 tactacctccgtccctaattataagacccttttgagaa 2290016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 204
Target Start/End: Complemental strand, 25247727 - 25247690
Alignment:
Q  167 tactacctccgtccctaaatataagactcttttgagaa 204  Q
    |||| ||||||||||||| |||||||||||||||||||    
T  25247727 tactccctccgtccctaattataagactcttttgagaa 25247690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 204
Target Start/End: Complemental strand, 34012554 - 34012517
Alignment:
Q  167 tactacctccgtccctaaatataagactcttttgagaa 204  Q
    |||||||||||||||||| |||||||| ||||||||||    
T  34012554 tactacctccgtccctaattataagacccttttgagaa 34012517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 204
Target Start/End: Complemental strand, 34979114 - 34979077
Alignment:
Q  167 tactacctccgtccctaaatataagactcttttgagaa 204  Q
    |||| ||||||||||||| |||||||||||||||||||    
T  34979114 tactccctccgtccctaattataagactcttttgagaa 34979077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 200
Target Start/End: Complemental strand, 35888607 - 35888574
Alignment:
Q  167 tactacctccgtccctaaatataagactcttttg 200  Q
    |||||||||||||||||||||||||| |||||||    
T  35888607 tactacctccgtccctaaatataagagtcttttg 35888574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 204
Target Start/End: Original strand, 46148431 - 46148468
Alignment:
Q  167 tactacctccgtccctaaatataagactcttttgagaa 204  Q
    |||||||||||||||||||||||||||  |||||||||    
T  46148431 tactacctccgtccctaaatataagacctttttgagaa 46148468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 203
Target Start/End: Complemental strand, 33381610 - 33381574
Alignment:
Q  167 tactacctccgtccctaaatataagactcttttgaga 203  Q
    |||||||||||||||||| |||||||| |||||||||    
T  33381610 tactacctccgtccctaattataagacccttttgaga 33381574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 34; Significance: 0.0000000003; HSPs: 17)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 167 - 204
Target Start/End: Complemental strand, 8503542 - 8503505
Alignment:
Q  167 tactacctccgtccctaaatataagactcttttgagaa 204  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  8503542 tactacctccgtccctaaatataagacccttttgagaa 8503505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 201
Target Start/End: Original strand, 36584704 - 36584744
Alignment:
Q  161 tttatttactacctccgtccctaaatataagactcttttga 201  Q
    ||||||||||||||| |||||||| ||||||||||||||||    
T  36584704 tttatttactacctctgtccctaattataagactcttttga 36584744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 166 - 201
Target Start/End: Original strand, 4564236 - 4564271
Alignment:
Q  166 ttactacctccgtccctaaatataagactcttttga 201  Q
    ||||||||||||||||||| ||||||||||||||||    
T  4564236 ttactacctccgtccctaattataagactcttttga 4564271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 166 - 201
Target Start/End: Complemental strand, 20621722 - 20621687
Alignment:
Q  166 ttactacctccgtccctaaatataagactcttttga 201  Q
    ||||||||||||||||||| ||||||||||||||||    
T  20621722 ttactacctccgtccctaattataagactcttttga 20621687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 204
Target Start/End: Complemental strand, 47008540 - 47008502
Alignment:
Q  166 ttactacctccgtccctaaatataagactcttttgagaa 204  Q
    ||||||||||||||||||| |||||||| ||||||||||    
T  47008540 ttactacctccgtccctaattataagacacttttgagaa 47008502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 201
Target Start/End: Original strand, 49383344 - 49383378
Alignment:
Q  167 tactacctccgtccctaaatataagactcttttga 201  Q
    |||||||||||||||||| ||||||||||||||||    
T  49383344 tactacctccgtccctaattataagactcttttga 49383378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 204
Target Start/End: Original strand, 1450242 - 1450279
Alignment:
Q  167 tactacctccgtccctaaatataagactcttttgagaa 204  Q
    |||||||| ||||||||| |||||||||||||||||||    
T  1450242 tactaccttcgtccctaattataagactcttttgagaa 1450279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 204
Target Start/End: Complemental strand, 4759388 - 4759351
Alignment:
Q  167 tactacctccgtccctaaatataagactcttttgagaa 204  Q
    |||||||||||||||||| |||||||| ||||||||||    
T  4759388 tactacctccgtccctaattataagacccttttgagaa 4759351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 204
Target Start/End: Original strand, 8321925 - 8321962
Alignment:
Q  167 tactacctccgtccctaaatataagactcttttgagaa 204  Q
    |||||||||||||||||| |||||||| ||||||||||    
T  8321925 tactacctccgtccctaattataagacccttttgagaa 8321962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 204
Target Start/End: Complemental strand, 24087372 - 24087335
Alignment:
Q  167 tactacctccgtccctaaatataagactcttttgagaa 204  Q
    |||||||||||||||||| |||||||| ||||||||||    
T  24087372 tactacctccgtccctaattataagacccttttgagaa 24087335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 204
Target Start/End: Original strand, 26221288 - 26221325
Alignment:
Q  167 tactacctccgtccctaaatataagactcttttgagaa 204  Q
    |||| ||||||||||||| |||||||||||||||||||    
T  26221288 tactccctccgtccctaattataagactcttttgagaa 26221325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 204
Target Start/End: Original strand, 30819878 - 30819915
Alignment:
Q  167 tactacctccgtccctaaatataagactcttttgagaa 204  Q
    |||||||||||||||||| |||||||| ||||||||||    
T  30819878 tactacctccgtccctaactataagacccttttgagaa 30819915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 204
Target Start/End: Complemental strand, 35572491 - 35572454
Alignment:
Q  167 tactacctccgtccctaaatataagactcttttgagaa 204  Q
    |||||||||||||| ||| |||||||||||||||||||    
T  35572491 tactacctccgtccttaagtataagactcttttgagaa 35572454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 204
Target Start/End: Complemental strand, 41392917 - 41392880
Alignment:
Q  167 tactacctccgtccctaaatataagactcttttgagaa 204  Q
    |||||||||||||||||| |||||||| ||||||||||    
T  41392917 tactacctccgtccctaattataagacccttttgagaa 41392880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 204
Target Start/End: Complemental strand, 46845529 - 46845492
Alignment:
Q  167 tactacctccgtccctaaatataagactcttttgagaa 204  Q
    |||||||||||||||||| |||||||| ||||||||||    
T  46845529 tactacctccgtccctaattataagacccttttgagaa 46845492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 204
Target Start/End: Complemental strand, 49383870 - 49383833
Alignment:
Q  167 tactacctccgtccctaaatataagactcttttgagaa 204  Q
    ||||||||||||| |||| |||||||||||||||||||    
T  49383870 tactacctccgtctctaattataagactcttttgagaa 49383833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 204
Target Start/End: Original strand, 14428603 - 14428647
Alignment:
Q  160 ttttatttactacctccgtccctaaatataagactcttttgagaa 204  Q
    ||||| ||||| ||||||||||||| |||||||| ||||||||||    
T  14428603 ttttaattactccctccgtccctaattataagacccttttgagaa 14428647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 34; Significance: 0.0000000003; HSPs: 12)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 167 - 204
Target Start/End: Complemental strand, 11865326 - 11865289
Alignment:
Q  167 tactacctccgtccctaaatataagactcttttgagaa 204  Q
    |||||||||||||||||| |||||||||||||||||||    
T  11865326 tactacctccgtccctaattataagactcttttgagaa 11865289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 167 - 204
Target Start/End: Complemental strand, 26334882 - 26334845
Alignment:
Q  167 tactacctccgtccctaaatataagactcttttgagaa 204  Q
    |||||||||||||||||| |||||||||||||||||||    
T  26334882 tactacctccgtccctaattataagactcttttgagaa 26334845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 166 - 201
Target Start/End: Complemental strand, 40789126 - 40789091
Alignment:
Q  166 ttactacctccgtccctaaatataagactcttttga 201  Q
    ||||||||||||||||||| ||||||||||||||||    
T  40789126 ttactacctccgtccctaattataagactcttttga 40789091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 204
Target Start/End: Complemental strand, 8912912 - 8912874
Alignment:
Q  166 ttactacctccgtccctaaatataagactcttttgagaa 204  Q
    ||||||||||||||||||| |||||||| ||||||||||    
T  8912912 ttactacctccgtccctaattataagacccttttgagaa 8912874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 201
Target Start/End: Original strand, 13598522 - 13598556
Alignment:
Q  167 tactacctccgtccctaaatataagactcttttga 201  Q
    ||||||||||||||||||||||||||| |||||||    
T  13598522 tactacctccgtccctaaatataagacccttttga 13598556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 204
Target Start/End: Complemental strand, 16108517 - 16108475
Alignment:
Q  162 ttatttactacctccgtccctaaatataagactcttttgagaa 204  Q
    ||||||||| ||||||||||||| ||||||| |||||||||||    
T  16108517 ttatttactccctccgtccctaattataagattcttttgagaa 16108475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 204
Target Start/End: Original strand, 2060316 - 2060353
Alignment:
Q  167 tactacctccgtccctaaatataagactcttttgagaa 204  Q
    |||||||||||||||||| |||||||| ||||||||||    
T  2060316 tactacctccgtccctaattataagacccttttgagaa 2060353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 200
Target Start/End: Complemental strand, 6028639 - 6028606
Alignment:
Q  167 tactacctccgtccctaaatataagactcttttg 200  Q
    |||||||||||||||||||||||||| |||||||    
T  6028639 tactacctccgtccctaaatataagagtcttttg 6028606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 204
Target Start/End: Complemental strand, 7116336 - 7116299
Alignment:
Q  167 tactacctccgtccctaaatataagactcttttgagaa 204  Q
    |||||||||||||||||| |||||||| ||||||||||    
T  7116336 tactacctccgtccctaattataagacccttttgagaa 7116299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 204
Target Start/End: Complemental strand, 26322330 - 26322293
Alignment:
Q  167 tactacctccgtccctaaatataagactcttttgagaa 204  Q
    |||||||||||||||||| |||||||| ||||||||||    
T  26322330 tactacctccgtccctaattataagacccttttgagaa 26322293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 204
Target Start/End: Original strand, 28566151 - 28566188
Alignment:
Q  167 tactacctccgtccctaaatataagactcttttgagaa 204  Q
    |||||||||||||||||| |||||||| ||||||||||    
T  28566151 tactacctccgtccctaattataagacccttttgagaa 28566188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 204
Target Start/End: Complemental strand, 38121548 - 38121511
Alignment:
Q  167 tactacctccgtccctaaatataagactcttttgagaa 204  Q
    ||||||||||||||||||  ||||||||||||||||||    
T  38121548 tactacctccgtccctaataataagactcttttgagaa 38121511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 34; Significance: 0.0000000003; HSPs: 14)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 167 - 204
Target Start/End: Original strand, 18237094 - 18237131
Alignment:
Q  167 tactacctccgtccctaaatataagactcttttgagaa 204  Q
    |||||||||||||||||| |||||||||||||||||||    
T  18237094 tactacctccgtccctaattataagactcttttgagaa 18237131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 204
Target Start/End: Original strand, 26768385 - 26768423
Alignment:
Q  166 ttactacctccgtccctaaatataagactcttttgagaa 204  Q
    ||||||||| |||||||||||||||||| ||||||||||    
T  26768385 ttactaccttcgtccctaaatataagacccttttgagaa 26768423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 201
Target Start/End: Complemental strand, 29437891 - 29437857
Alignment:
Q  167 tactacctccgtccctaaatataagactcttttga 201  Q
    |||||||||||||||||| ||||||||||||||||    
T  29437891 tactacctccgtccctaattataagactcttttga 29437857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 204
Target Start/End: Original strand, 33336800 - 33336838
Alignment:
Q  166 ttactacctccgtccctaaatataagactcttttgagaa 204  Q
    |||||||||||||| |||||||||||| |||||||||||    
T  33336800 ttactacctccgtctctaaatataagattcttttgagaa 33336838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 204
Target Start/End: Original strand, 1427199 - 1427236
Alignment:
Q  167 tactacctccgtccctaaatataagactcttttgagaa 204  Q
    |||||||||||||| |||||||||||| ||||||||||    
T  1427199 tactacctccgtccttaaatataagacccttttgagaa 1427236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 166 - 199
Target Start/End: Original strand, 6129917 - 6129950
Alignment:
Q  166 ttactacctccgtccctaaatataagactctttt 199  Q
    ||||||||||||||||||| ||||||||||||||    
T  6129917 ttactacctccgtccctaattataagactctttt 6129950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 204
Target Start/End: Complemental strand, 7763786 - 7763749
Alignment:
Q  167 tactacctccgtccctaaatataagactcttttgagaa 204  Q
    |||||||||||||||||| |||||||| ||||||||||    
T  7763786 tactacctccgtccctaattataagacccttttgagaa 7763749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 204
Target Start/End: Original strand, 25509209 - 25509246
Alignment:
Q  167 tactacctccgtccctaaatataagactcttttgagaa 204  Q
    |||||||||||||||||| |||||||| ||||||||||    
T  25509209 tactacctccgtccctaattataagacccttttgagaa 25509246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 204
Target Start/End: Original strand, 27037269 - 27037306
Alignment:
Q  167 tactacctccgtccctaaatataagactcttttgagaa 204  Q
    |||||||||||||||||| |||||||| ||||||||||    
T  27037269 tactacctccgtccctaattataagacccttttgagaa 27037306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 204
Target Start/End: Complemental strand, 42276198 - 42276161
Alignment:
Q  167 tactacctccgtccctaaatataagactcttttgagaa 204  Q
    |||||||||||||||||| |||||||| ||||||||||    
T  42276198 tactacctccgtccctaattataagacccttttgagaa 42276161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 204
Target Start/End: Complemental strand, 43456658 - 43456621
Alignment:
Q  167 tactacctccgtccctaaatataagactcttttgagaa 204  Q
    |||||||||||||||||| |||||||| ||||||||||    
T  43456658 tactacctccgtccctaattataagacccttttgagaa 43456621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 171 - 204
Target Start/End: Complemental strand, 45285843 - 45285810
Alignment:
Q  171 acctccgtccctaaatataagactcttttgagaa 204  Q
    |||||||||||||| |||||||||||||||||||    
T  45285843 acctccgtccctaattataagactcttttgagaa 45285810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 204
Target Start/End: Original strand, 47754017 - 47754054
Alignment:
Q  167 tactacctccgtccctaaatataagactcttttgagaa 204  Q
    |||||||||||||||||| ||||| |||||||||||||    
T  47754017 tactacctccgtccctaattataaaactcttttgagaa 47754054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 199
Target Start/End: Complemental strand, 45944010 - 45943978
Alignment:
Q  167 tactacctccgtccctaaatataagactctttt 199  Q
    |||||||||||||||||| ||||||||||||||    
T  45944010 tactacctccgtccctaattataagactctttt 45943978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 33; Significance: 0.000000001; HSPs: 20)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 204
Target Start/End: Complemental strand, 49373737 - 49373693
Alignment:
Q  160 ttttatttactacctccgtccctaaatataagactcttttgagaa 204  Q
    ||||| ||||||||||||||||||| |||||||| ||||||||||    
T  49373737 ttttaattactacctccgtccctaattataagacccttttgagaa 49373693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 201
Target Start/End: Original strand, 13548980 - 13549014
Alignment:
Q  167 tactacctccgtccctaaatataagactcttttga 201  Q
    |||||||||||||||||| ||||||||||||||||    
T  13548980 tactacctccgtccctaattataagactcttttga 13549014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 204
Target Start/End: Original strand, 15241479 - 15241517
Alignment:
Q  166 ttactacctccgtccctaaatataagactcttttgagaa 204  Q
    ||||| ||||||||||||| |||||||||||||||||||    
T  15241479 ttactccctccgtccctaattataagactcttttgagaa 15241517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 201
Target Start/End: Complemental strand, 30050121 - 30050087
Alignment:
Q  167 tactacctccgtccctaaatataagactcttttga 201  Q
    |||||||||||||||||| ||||||||||||||||    
T  30050121 tactacctccgtccctaattataagactcttttga 30050087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 204
Target Start/End: Complemental strand, 53564394 - 53564356
Alignment:
Q  166 ttactacctccgtccctaaatataagactcttttgagaa 204  Q
    ||||||||||||||||||| |||||||| ||||||||||    
T  53564394 ttactacctccgtccctaattataagacccttttgagaa 53564356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 204
Target Start/End: Original strand, 4415965 - 4416002
Alignment:
Q  167 tactacctccgtccctaaatataagactcttttgagaa 204  Q
    |||||||||||||||||| |||||||| ||||||||||    
T  4415965 tactacctccgtccctaattataagacccttttgagaa 4416002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 204
Target Start/End: Complemental strand, 20455218 - 20455181
Alignment:
Q  167 tactacctccgtccctaaatataagactcttttgagaa 204  Q
    |||||||||||||||||| |||||||| ||||||||||    
T  20455218 tactacctccgtccctaattataagacccttttgagaa 20455181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 204
Target Start/End: Complemental strand, 25124283 - 25124246
Alignment:
Q  167 tactacctccgtccctaaatataagactcttttgagaa 204  Q
    |||||||||||||||||| |||||||| ||||||||||    
T  25124283 tactacctccgtccctaattataagacccttttgagaa 25124246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 204
Target Start/End: Complemental strand, 28501423 - 28501386
Alignment:
Q  167 tactacctccgtccctaaatataagactcttttgagaa 204  Q
    |||||||||||||||||| |||||||| ||||||||||    
T  28501423 tactacctccgtccctaattataagacccttttgagaa 28501386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 204
Target Start/End: Complemental strand, 29520201 - 29520164
Alignment:
Q  167 tactacctccgtccctaaatataagactcttttgagaa 204  Q
    |||||||||||||||||| |||||||| ||||||||||    
T  29520201 tactacctccgtccctaattataagacccttttgagaa 29520164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 204
Target Start/End: Original strand, 31937076 - 31937113
Alignment:
Q  167 tactacctccgtccctaaatataagactcttttgagaa 204  Q
    |||||||||||||||||| |||||||| ||||||||||    
T  31937076 tactacctccgtccctaattataagacccttttgagaa 31937113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 204
Target Start/End: Original strand, 46949992 - 46950029
Alignment:
Q  167 tactacctccgtccctaaatataagactcttttgagaa 204  Q
    |||||||||||||||||| |||||||| ||||||||||    
T  46949992 tactacctccgtccctaattataagacccttttgagaa 46950029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 204
Target Start/End: Original strand, 49793091 - 49793128
Alignment:
Q  167 tactacctccgtccctaaatataagactcttttgagaa 204  Q
    |||||||||||||||||| |||||||| ||||||||||    
T  49793091 tactacctccgtccctaattataagacccttttgagaa 49793128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 166 - 203
Target Start/End: Complemental strand, 55563165 - 55563128
Alignment:
Q  166 ttactacctccgtccctaaatataagactcttttgaga 203  Q
    ||||||||||||||||||| |||||||| |||||||||    
T  55563165 ttactacctccgtccctaattataagacccttttgaga 55563128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 204
Target Start/End: Original strand, 56432518 - 56432555
Alignment:
Q  167 tactacctccgtccctaaatataagactcttttgagaa 204  Q
    |||||||||||||||||| |||||||| ||||||||||    
T  56432518 tactacctccgtccctaattataagacccttttgagaa 56432555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 204
Target Start/End: Complemental strand, 4549921 - 4549889
Alignment:
Q  172 cctccgtccctaaatataagactcttttgagaa 204  Q
    ||||||||||||| |||||||||||||||||||    
T  4549921 cctccgtccctaattataagactcttttgagaa 4549889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 203
Target Start/End: Complemental strand, 6462727 - 6462691
Alignment:
Q  167 tactacctccgtccctaaatataagactcttttgaga 203  Q
    |||||||||||||||||| ||||||| ||||||||||    
T  6462727 tactacctccgtccctaattataagattcttttgaga 6462691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 201
Target Start/End: Complemental strand, 23623935 - 23623899
Alignment:
Q  165 tttactacctccgtccctaaatataagactcttttga 201  Q
    |||||||||||||||||||| |||| |||||||||||    
T  23623935 tttactacctccgtccctaattatatgactcttttga 23623899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 203
Target Start/End: Complemental strand, 32899255 - 32899219
Alignment:
Q  167 tactacctccgtccctaaatataagactcttttgaga 203  Q
    |||||||||||||||||| |||||||| |||||||||    
T  32899255 tactacctccgtccctaattataagacccttttgaga 32899219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 203
Target Start/End: Complemental strand, 37639924 - 37639888
Alignment:
Q  167 tactacctccgtccctaaatataagactcttttgaga 203  Q
    ||||| |||||||||||| ||||||||||||||||||    
T  37639924 tactatctccgtccctaattataagactcttttgaga 37639888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0674 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 204
Target Start/End: Original strand, 5150 - 5188
Alignment:
Q  166 ttactacctccgtccctaaatataagactcttttgagaa 204  Q
    ||||||||||||||||||| |||||||| ||||||||||    
T  5150 ttactacctccgtccctaattataagacccttttgagaa 5188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0549 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0549
Description:

Target: scaffold0549; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 204
Target Start/End: Complemental strand, 10220 - 10182
Alignment:
Q  166 ttactacctccgtccctaaatataagactcttttgagaa 204  Q
    ||||||||||||||||||| |||||||| ||||||||||    
T  10220 ttactacctccgtccctaattataagacccttttgagaa 10182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 204
Target Start/End: Original strand, 18496 - 18534
Alignment:
Q  166 ttactacctccgtccctaaatataagactcttttgagaa 204  Q
    ||||||||||||||||||| |||||||| ||||||||||    
T  18496 ttactacctccgtccctaattataagacccttttgagaa 18534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 204
Target Start/End: Original strand, 3437 - 3475
Alignment:
Q  166 ttactacctccgtccctaaatataagactcttttgagaa 204  Q
    ||||||||||||||||||| |||||||| ||||||||||    
T  3437 ttactacctccgtccctaattataagacccttttgagaa 3475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 204
Target Start/End: Original strand, 48653 - 48691
Alignment:
Q  166 ttactacctccgtccctaaatataagactcttttgagaa 204  Q
    ||||||||||||||||||| |||||||| ||||||||||    
T  48653 ttactacctccgtccctaattataagacccttttgagaa 48691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 31; Significance: 0.00000002; HSPs: 10)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 204
Target Start/End: Complemental strand, 23286512 - 23286474
Alignment:
Q  166 ttactacctccgtccctaaatataagactcttttgagaa 204  Q
    ||||||||||||||||||| |||||||| ||||||||||    
T  23286512 ttactacctccgtccctaattataagacccttttgagaa 23286474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 201
Target Start/End: Original strand, 24857556 - 24857590
Alignment:
Q  167 tactacctccgtccctaaatataagactcttttga 201  Q
    |||||||||||||||||| ||||||||||||||||    
T  24857556 tactacctccgtccctaattataagactcttttga 24857590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 201
Target Start/End: Original strand, 39971014 - 39971048
Alignment:
Q  167 tactacctccgtccctaaatataagactcttttga 201  Q
    |||||||||||||||||| ||||||||||||||||    
T  39971014 tactacctccgtccctaattataagactcttttga 39971048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 204
Target Start/End: Complemental strand, 40004455 - 40004409
Alignment:
Q  158 tcttttatttactacctccgtccctaaatataagactcttttgagaa 204  Q
    |||||||| |||| ||||||||||||| |||||||| ||||||||||    
T  40004455 tcttttatatactccctccgtccctaattataagacccttttgagaa 40004409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 204
Target Start/End: Complemental strand, 43060449 - 43060411
Alignment:
Q  166 ttactacctccgtccctaaatataagactcttttgagaa 204  Q
    ||||||||||||||||||| |||||||| ||||||||||    
T  43060449 ttactacctccgtccctaattataagacccttttgagaa 43060411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 204
Target Start/End: Original strand, 3028013 - 3028050
Alignment:
Q  167 tactacctccgtccctaaatataagactcttttgagaa 204  Q
    |||||||||||||||||| |||||||| ||||||||||    
T  3028013 tactacctccgtccctaattataagacccttttgagaa 3028050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 204
Target Start/End: Original strand, 8949812 - 8949849
Alignment:
Q  167 tactacctccgtccctaaatataagactcttttgagaa 204  Q
    |||||||||||||||||| |||||||| ||||||||||    
T  8949812 tactacctccgtccctaattataagacccttttgagaa 8949849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 204
Target Start/End: Complemental strand, 15190852 - 15190815
Alignment:
Q  167 tactacctccgtccctaaatataagactcttttgagaa 204  Q
    |||| ||||||||||||| |||||||||||||||||||    
T  15190852 tactccctccgtccctaattataagactcttttgagaa 15190815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 166 - 203
Target Start/End: Complemental strand, 19571977 - 19571940
Alignment:
Q  166 ttactacctccgtccctaaatataagactcttttgaga 203  Q
    ||||||||||||||||||| |||||||| |||||||||    
T  19571977 ttactacctccgtccctaattataagacccttttgaga 19571940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 204
Target Start/End: Complemental strand, 23260175 - 23260138
Alignment:
Q  167 tactacctccgtccctaaatataagactcttttgagaa 204  Q
    |||||||||||||||||| |||||||| ||||||||||    
T  23260175 tactacctccgtccctaattataagacccttttgagaa 23260138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0457 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0457
Description:

Target: scaffold0457; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 204
Target Start/End: Complemental strand, 4700 - 4663
Alignment:
Q  167 tactacctccgtccctaaatataagactcttttgagaa 204  Q
    |||||||||||||||||| ||||||| |||||||||||    
T  4700 tactacctccgtccctaattataagattcttttgagaa 4663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 202
Target Start/End: Original strand, 55930 - 55962
Alignment:
Q  170 tacctccgtccctaaatataagactcttttgag 202  Q
    ||||||||||| |||||||||||||||||||||    
T  55930 tacctccgtccttaaatataagactcttttgag 55962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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