View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8452_low_15 (Length: 240)
Name: NF8452_low_15
Description: NF8452
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8452_low_15 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 18 - 240
Target Start/End: Original strand, 32737136 - 32737359
Alignment:
| Q |
18 |
gtaatataatagagaacatttattttatgccgatcaaaggaataaattttaatctcaattttttcaagtaaagttcacaagacaaaacattaaattatgg |
117 |
Q |
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| T |
32737136 |
gtaatataatagagaacatttattttatgccgatcaaaggaataaattttaatctcaattttttcaagtaaagttcacaagacaaaacattaaattatgg |
32737235 |
T |
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| Q |
118 |
aatcacattgataatccctatgaaggagtttatggtactacattacatacacacgagactacaaataatagtact-actagtgtctagtgctagaaaata |
216 |
Q |
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||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| |
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| T |
32737236 |
aatcacattgataatccctatgaagtagtttatggtactacattacatacacacgagactacaaataatagtactaactagtgtcaagtgctagaaaata |
32737335 |
T |
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| Q |
217 |
tgtggattattataatttggaatt |
240 |
Q |
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|||||||||||||||||||||||| |
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| T |
32737336 |
tgtggattattataatttggaatt |
32737359 |
T |
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