View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8456_low_6 (Length: 289)
Name: NF8456_low_6
Description: NF8456
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8456_low_6 |
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Alignment Details
Target: chr7 (Bit Score: 200; Significance: 1e-109; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 10 - 276
Target Start/End: Complemental strand, 31544470 - 31544201
Alignment:
| Q |
10 |
aaagctaaaacaagtgtcgttttctttgtccactttgtaattagaagaccgtgaacacattctttatatttttcaattcattttctaatgaaaaaacacg |
109 |
Q |
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| T |
31544470 |
aaagctaaaacaagtgtcgctttctttgtccactttgtaattagaagaccgcgaacacgttctttatatttttcaattcattttctaatgaaaaaacacg |
31544371 |
T |
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| Q |
110 |
gatggctcaccatgtttgacgacaattaggctgtcatgactcatgagtgcacaatgttttttaatgaaaacgtgtatagtaattgaattcaactgtgata |
209 |
Q |
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| T |
31544370 |
gatggctcaccatgtttgacgacaattaggctgacatgactcatgagtgcacaatgttttttaatgaaaacgtgtatagtaattgaattcaactgtgata |
31544271 |
T |
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| Q |
210 |
gggagtattcttattccttcttctaccatca------tcgatcaatatacaaaatttagtacactgttagtga |
276 |
Q |
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| T |
31544270 |
gggag---tgttattccttcttctagcctgaggagactcgatcaatatacaaaatttagtgcactgttagtga |
31544201 |
T |
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