View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8459_low_16 (Length: 209)
Name: NF8459_low_16
Description: NF8459
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8459_low_16 |
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Alignment Details
Target: chr8 (Bit Score: 135; Significance: 2e-70; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 14 - 160
Target Start/End: Complemental strand, 37168903 - 37168757
Alignment:
| Q |
14 |
agaagcagagacacagttagtaatgatatgcacatatgcacattttttgttattctagtttctaatctatcaattataagatctaagatttcaatctcct |
113 |
Q |
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| T |
37168903 |
agaagcagagacacagttaataatgatatgcacatatgcacattttttgttattctagtttctaatctatcaattataagatctaagatttcaatctcct |
37168804 |
T |
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| Q |
114 |
cgaattccaaattcaattaaatgtgtgaaatatctccacatgctata |
160 |
Q |
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|||||||||| ||||||||||||| |||||||||||||||||||||| |
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| T |
37168803 |
cgaattccaatttcaattaaatgtctgaaatatctccacatgctata |
37168757 |
T |
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