View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8460_low_11 (Length: 251)
Name: NF8460_low_11
Description: NF8460
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8460_low_11 |
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Alignment Details
Target: chr1 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 17 - 229
Target Start/End: Original strand, 46752532 - 46752744
Alignment:
| Q |
17 |
taatactagctgatacagttgttaatgaagctactgatattttgttttattctaaattctaaaagatcttttttcagctaaattttatataaataaatct |
116 |
Q |
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| T |
46752532 |
taatactagctgatacagttgttaatgaagctgctgatattttgttttattctaaattctaaaagatcttttttcagctaaattttatataaataaatct |
46752631 |
T |
|
| Q |
117 |
atcaatcttttagatttttgtgggtgcaatcttaccagaacccttcatctttgtgacatcatgcatgtaaataatttttaaacaaaatttgtgttggttt |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46752632 |
atcaatcttttagatttttgtgggtgcaatcttaccagaacccttcatctttgtgacatcatgcatgtaaataatttttaaacaaaatttgtgttggttt |
46752731 |
T |
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| Q |
217 |
ttagttgtgtggt |
229 |
Q |
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||||||||||||| |
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| T |
46752732 |
ttagttgtgtggt |
46752744 |
T |
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